View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20346_high_21 (Length: 203)
Name: NF20346_high_21
Description: NF20346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20346_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 33260012 - 33259847
Alignment:
| Q |
16 |
aagaaaaataacttggccatacggatcaaatagataaacggtgagatttctccacaaattagatatttatgaaatgaatcaagtcgccataagatgggag |
115 |
Q |
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| T |
33260012 |
aagaaaaataacttggccatacggatcaaatagataaacggtgagatttctccacaaattagatatttatgaaatgaatcaagtcgccataagatgggag |
33259913 |
T |
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| Q |
116 |
aatgtgactgattgaacaaccaaactatctaaacagagtgagatttgttgagactaaggacgagca |
181 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33259912 |
aatgtgactgattgaacaaccaaactatctaaacagagtgagatttgttgagactaaggacgagca |
33259847 |
T |
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