View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20347_high_7 (Length: 491)
Name: NF20347_high_7
Description: NF20347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20347_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 13 - 475
Target Start/End: Complemental strand, 34850179 - 34849718
Alignment:
| Q |
13 |
aatatcatttaaattagtgataatatctttttctcnnnnnnnnnntttaaaataaaatcatatatttggagtttttaatcaattcatgtccgtgagtaaa |
112 |
Q |
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| T |
34850179 |
aatatcatttaaattagtgataatatctttttctcaaaaaaaaaatt-aaaataaaatcatatatttggagtttttaatcaattcatgtccgtgagtaaa |
34850081 |
T |
|
| Q |
113 |
taattaatctgcaacttggaagcgctgacaaagtttttgggaagaagctcacttcctccattcacaaacacgtcttcaaatttcaatcacaagtttttgg |
212 |
Q |
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| T |
34850080 |
taattaatctgcaacttggaagcgctgacaaagtttttgggaagaagctcacttcctccattcacaaacacgtcttcaaatttcaatcacaagtttttgg |
34849981 |
T |
|
| Q |
213 |
gaagataacttcatggctaaggaaaagttagaaattaatatgaaactaaagaaacaatttaaagtaaactaattagtcaaaatcagaaaaatgtggggca |
312 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34849980 |
gaagaaaacttcatggctaaggaaaagttagaaattaatatgaaactaaagaaacaatttaaagtaaactaattagtcaaaatcagaaaaatgtggggca |
34849881 |
T |
|
| Q |
313 |
tcaatatctcgacttgtgggtaaatccagtattgtgctttgcaatcagtttttctttaaaaatgttacatttgagaaggttgatgtattgattttgaaag |
412 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34849880 |
tcaatatctcgacttgtgggtaaatccagtattgtgctttgcaatcagtttttcactaaaaatgttacatttgagaaggttgatgtattgattttgaaag |
34849781 |
T |
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| Q |
413 |
aaaaggtgagaatgaacttaaatgtccaatcgatatactttgacaaacattgtagaaaaatat |
475 |
Q |
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| T |
34849780 |
aaaaggtgagaatgaacttaaatgtccaatcgatatactttgacaaacattgtagaaaaatat |
34849718 |
T |
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