View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20348_low_11 (Length: 358)
Name: NF20348_low_11
Description: NF20348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20348_low_11 |
 |  |
|
| [»] chr2 (6 HSPs) |
 |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
| [»] scaffold0113 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 50 - 358
Target Start/End: Original strand, 32703701 - 32704013
Alignment:
| Q |
50 |
ttgatactcctgatggtctcatttccttgaaccgccaagtttccaattgaaatgaactctatctatagatattttttcagttgtgtttaaattata---- |
145 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32703701 |
ttgatactcctgatggtctcatttccttgaaccgccaagtttccaattgaaatgaactctatctatagatattttttcagttgtgtttaaattatatata |
32703800 |
T |
 |
| Q |
146 |
attatgagttttttctcccagtccattaagtagaaatccgcataaatccgattttacccgcatagaatgtgtgtagagatgtcttccatgaaatgtctta |
245 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
32703801 |
attatgagttttttctcccagtccactaagtagaaatccgcataaatccaattttacctgcacagaatgcgtgtagagatgtcttccatgagatgtcttg |
32703900 |
T |
 |
| Q |
246 |
ttttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatgaaaata |
345 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
32703901 |
ttttgcggaattacataatttatcaataaaaagattcaaaacacttatgaagttgtatagttagagaagaaaccggattacaacgactcaaatgaaaata |
32704000 |
T |
 |
| Q |
346 |
atataaaatatgt |
358 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
32704001 |
atacaaaatatgt |
32704013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 328
Target Start/End: Complemental strand, 17883046 - 17882966
Alignment:
| Q |
247 |
tttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaa |
328 |
Q |
| |
|
||||||||||||||| |||||||||| |||||| |||||||| ||||||||||| | ||| || ||||||| | ||||||| |
|
|
| T |
17883046 |
tttgccgaattacatgatttatcaat-aaaagactcaaaacaactatgaaattgtctggtttgaaaagaaaccgaattacaa |
17882966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 31450104 - 31449995
Alignment:
| Q |
247 |
tttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatgaaaataa |
346 |
Q |
| |
|
|||||||||| |||| ||||||||||||||| | ||||||||| ||| || ||| ||| ||| ||| |||||| ||| || ||||| |||||||| || |
|
|
| T |
31450104 |
tttgccgaatcacatgatttatcaataaaaatactcaaaacacctataaagttgcataattaaggaataaactgatttataatgactctaatgaaaaaaa |
31450005 |
T |
 |
| Q |
347 |
tataaaatat |
356 |
Q |
| |
|
|| ||||||| |
|
|
| T |
31450004 |
tacaaaatat |
31449995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 19920067 - 19920127
Alignment:
| Q |
246 |
ttttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagtt |
307 |
Q |
| |
|
|||| ||||||||||| |||| ||||||| || ||||||||||| ||||||||||| ||||| |
|
|
| T |
19920067 |
tttttccgaattacatgatttttcaataataa-attcaaaacacctatgaaattgtttagtt |
19920127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 32703648 - 32703685
Alignment:
| Q |
6 |
gtccaagaatatagttgcatttagagttttcatatatt |
43 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||| |
|
|
| T |
32703648 |
gtccaataagatagttgcatttagagttttcatatatt |
32703685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 19541193 - 19541137
Alignment:
| Q |
238 |
atgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatg |
294 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||| || ||||| ||||||||| |||| |
|
|
| T |
19541193 |
atgtcttattttgccgatttacatgatttctcactagaaagactcaaaacacctatg |
19541137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 53001146 - 53001254
Alignment:
| Q |
247 |
tttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatgaaaataa |
346 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||||| |||||||||||||| |||||| |||| |||||||| ||||||| || || ||||||||||| |
|
|
| T |
53001146 |
tttgccgaattacata-tgtatcattaaaaagattaaaaacacttatgaagttgtatgattaggaaagaaactaaattacaatgaatcgaatgaaaataa |
53001244 |
T |
 |
| Q |
347 |
tataaaatat |
356 |
Q |
| |
|
|||||||||| |
|
|
| T |
53001245 |
tataaaatat |
53001254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 20044319 - 20044218
Alignment:
| Q |
253 |
gaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatgaaaataatataaa |
352 |
Q |
| |
|
||||||||| |||| |||||||||||| |||||| || |||| | ||| || ||| ||||||| || ||||||| ||||| |||||||| |||||||| |
|
|
| T |
20044319 |
gaattacatgatttttcaataaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaattacaatgactcgaatgaaaacaatataaa |
20044220 |
T |
 |
| Q |
353 |
at |
354 |
Q |
| |
|
|| |
|
|
| T |
20044219 |
at |
20044218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 30625021 - 30624960
Alignment:
| Q |
239 |
tgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattg |
300 |
Q |
| |
|
||||||| |||| ||||||||| |||| |||||||||||| ||||||||| |||||||||| |
|
|
| T |
30625021 |
tgtcttactttgtagaattacatgatttttcaataaaaagactcaaaacacctatgaaattg |
30624960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 16442225 - 16442273
Alignment:
| Q |
246 |
ttttgccgaattacataatttatcaataaaaagattcaaaacacttatg |
294 |
Q |
| |
|
|||| ||||||||||| |||||||| |||||||| |||||||||||||| |
|
|
| T |
16442225 |
ttttaccgaattacatgatttatcattaaaaagagtcaaaacacttatg |
16442273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 10576609 - 10576543
Alignment:
| Q |
238 |
atgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtata |
304 |
Q |
| |
|
||||||| |||| |||| ||||||||||| ||| || ||||| ||||||||| |||||| ||||||| |
|
|
| T |
10576609 |
atgtcttgtttttccgatttacataatttctcactagaaagaatcaaaacacctatgaagttgtata |
10576543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 13275712 - 13275754
Alignment:
| Q |
247 |
tttgccgaattacataatttatcaataaaaagattcaaaacac |
289 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
13275712 |
tttgccgaattacatgatttagcaataaaaagactcaaaacac |
13275754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 354
Target Start/End: Complemental strand, 4732822 - 4732790
Alignment:
| Q |
322 |
attacaacgactcaaatgaaaataatataaaat |
354 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
4732822 |
attacaacgactcaaatgaaaacaatataaaat |
4732790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 279
Target Start/End: Original strand, 9526811 - 9526843
Alignment:
| Q |
247 |
tttgccgaattacataatttatcaataaaaaga |
279 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
9526811 |
tttgccgaattacataatatatcaataaaaaga |
9526843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 354
Target Start/End: Original strand, 24042333 - 24042433
Alignment:
| Q |
254 |
aattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatgaaaataatataaaa |
353 |
Q |
| |
|
|||||| | |||||||| |||||| | ||||||||| ||||||||||| |||||| |||||| ||||||| ||||||||| |||| |||| |||| |
|
|
| T |
24042333 |
aattacgtgatttatcagtaaaaaaactcaaaacacctatgaaattgtctagttatgaaagaaatgaaattacaatgactcaaatcaaaacaatacaaaa |
24042432 |
T |
 |
| Q |
354 |
t |
354 |
Q |
| |
|
| |
|
|
| T |
24042433 |
t |
24042433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 354
Target Start/End: Complemental strand, 26159912 - 26159796
Alignment:
| Q |
238 |
atgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaa |
337 |
Q |
| |
|
||||||| |||||| || ||||| |||| ||| |||||||| ||||||||| |||||| ||| ||| || || ||||| ||||||||||||| || |
|
|
| T |
26159912 |
atgtcttgttttgctgatctacatgatttttcactaaaaagactcaaaacacatatgaagttggataatttaggacaaaactaaattacaacgactcgaa |
26159813 |
T |
 |
| Q |
338 |
tgaaaataatataaaat |
354 |
Q |
| |
|
|||||| |||| ||||| |
|
|
| T |
26159812 |
tgaaaacaatacaaaat |
26159796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 10867141 - 10867026
Alignment:
| Q |
241 |
tcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatga |
340 |
Q |
| |
|
|||| ||||||||| |||||| |||| ||| |||||||||||||| ||| | || | ||| || || |||| |||||| ||||||||||||||||||| |
|
|
| T |
10867141 |
tcttgttttgccgacttacatgatttctcactaaaaagattcaaagcacctttggagttgcatgatttgagataaaactgaattacaacgactcaaatga |
10867042 |
T |
 |
| Q |
341 |
aaataatataaaatat |
356 |
Q |
| |
|
||| |||| ||||||| |
|
|
| T |
10867041 |
aaacaatacaaaatat |
10867026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 307
Target Start/End: Complemental strand, 12878135 - 12878076
Alignment:
| Q |
248 |
ttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagtt |
307 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
12878135 |
ttgcggaattacataatttagcaataaaaagattcaaaacacctataaaattgtctagtt |
12878076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 23946819 - 23946917
Alignment:
| Q |
256 |
ttacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaatgaaaataatataaaat |
354 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||| |||| || | ||||||| | ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
23946819 |
ttacatgatttatcaataaaaagactcaaaacacttatgaagttgtcggttttgtgaagaaatagaattacaaagactcaaatgaaaacaatacaaaat |
23946917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 24617667 - 24617609
Alignment:
| Q |
238 |
atgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaa |
296 |
Q |
| |
|
||||||| |||||| || ||||||||||| ||| |||||||| |||||||||| ||||| |
|
|
| T |
24617667 |
atgtcttgttttgctgatttacataatttctcactaaaaagactcaaaacactcatgaa |
24617609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 230 - 354
Target Start/End: Original strand, 10253691 - 10253815
Alignment:
| Q |
230 |
tccatgaaatgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaac |
329 |
Q |
| |
|
|||||| | |||||| |||||| ||||| || ||||||||||||||| | ||| |||| |||||| ||| | | |||| ||||||| |||||||||| |
|
|
| T |
10253691 |
tccatgtagtgtcttgctttgcccaattatatgatttatcaataaaaataatcagaacaactatgaagttgcacaattagggaagaaattggattacaaa |
10253790 |
T |
 |
| Q |
330 |
gactcaaatgaaaataatataaaat |
354 |
Q |
| |
|
||||| |||||||| |||| ||||| |
|
|
| T |
10253791 |
gactcgaatgaaaacaatacaaaat |
10253815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 5214038 - 5214127
Alignment:
| Q |
246 |
ttttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaa |
337 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| || ||||| |||| | |||| | |||| | |||||| || |||||||||||||||| |
|
|
| T |
5214038 |
ttttgctgaattacatgatttatcaataaaaagactc--aacacatatggagttgtctggttaaaaaagaaattgaattacaacgactcaaa |
5214127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Original strand, 23804331 - 23804384
Alignment:
| Q |
247 |
tttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgt |
301 |
Q |
| |
|
||||||||||||||| |||| ||| ||||| || ||||||||||||||||||||| |
|
|
| T |
23804331 |
tttgccgaattacatgatttttcactaaaa-gactcaaaacacttatgaaattgt |
23804384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 354
Target Start/End: Complemental strand, 18391154 - 18391122
Alignment:
| Q |
322 |
attacaacgactcaaatgaaaataatataaaat |
354 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
18391154 |
attacaacgactcaaatgaaaataatataaaat |
18391122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 21829168 - 21829207
Alignment:
| Q |
315 |
aaactggattacaacgactcaaatgaaaataatataaaat |
354 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
21829168 |
aaactgaattacaacgactcaaatgaaaataatacaaaat |
21829207 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 28206096 - 28206152
Alignment:
| Q |
239 |
tgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaa |
296 |
Q |
| |
|
|||||| ||||||||||||||| |||||| || |||||| ||||||||||||||||| |
|
|
| T |
28206096 |
tgtcttgttttgccgaattacacgatttataaagaaaaag-ttcaaaacacttatgaa |
28206152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 218114 - 218041
Alignment:
| Q |
227 |
tcttccatgaaatgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgt |
301 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||||||||||| ||| || ||||||||| | ||||||||| |
|
|
| T |
218114 |
tcttccatgaggtgtcttagcttgccgaattaaataatttatcaat-aaatgactcaaaacacctttgaaattgt |
218041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 47780 - 47837
Alignment:
| Q |
239 |
tgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaa |
296 |
Q |
| |
|
|||||| |||||| ||||||||||||| | |||||||||| ||||||||| |||||| |
|
|
| T |
47780 |
tgtcttgttttgcggaattacataattaaataataaaaagaatcaaaacacgtatgaa |
47837 |
T |
 |
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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 301
Target Start/End: Complemental strand, 11841310 - 11841262
Alignment:
| Q |
252 |
cgaattacataatttatcaataaaaagattcaaaacacttatgaaattgt |
301 |
Q |
| |
|
||||||||||||||| ||||| |||||| ||||||||| ||||||||||| |
|
|
| T |
11841310 |
cgaattacataatttttcaat-aaaagactcaaaacacctatgaaattgt |
11841262 |
T |
 |
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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 30790932 - 30790827
Alignment:
| Q |
238 |
atgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatgaaattgtatagttagagaagaaactggattacaacgactcaaa |
337 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||| |||||||| ||||||||| ||||| ||| ||| || || |||||| |||| ||||||||||| |
|
|
| T |
30790932 |
atgtcttgtgttgccgatttacataatttttcactaaaaagactcaaaacaccaatgaagttggataatttaggataaaactgaattataacgactcaaa |
30790833 |
T |
 |
| Q |
338 |
tgaaaa |
343 |
Q |
| |
|
| |||| |
|
|
| T |
30790832 |
taaaaa |
30790827 |
T |
 |
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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 26070630 - 26070574
Alignment:
| Q |
238 |
atgtcttattttgccgaattacataatttatcaataaaaagattcaaaacacttatg |
294 |
Q |
| |
|
||||||| ||||||| | |||||| |||| ||| |||||||| |||||||||||||| |
|
|
| T |
26070630 |
atgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacacttatg |
26070574 |
T |
 |
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