View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2034_high_2 (Length: 399)

Name: NF2034_high_2
Description: NF2034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2034_high_2
NF2034_high_2
[»] chr1 (33 HSPs)
chr1 (1-376)||(5373058-5373432)
chr1 (353-399)||(8077640-8077686)
chr1 (353-399)||(24674386-24674432)
chr1 (354-399)||(4621395-4621440)
chr1 (354-399)||(7197404-7197449)
chr1 (354-399)||(34778336-34778381)
chr1 (353-399)||(27455024-27455070)
chr1 (354-399)||(14258585-14258630)
chr1 (354-399)||(15059560-15059605)
chr1 (354-399)||(29057495-29057540)
chr1 (354-399)||(32729539-32729584)
chr1 (354-399)||(46607804-46607849)
chr1 (354-399)||(47091684-47091729)
chr1 (358-398)||(1095154-1095194)
chr1 (353-397)||(25496648-25496692)
chr1 (359-399)||(46113560-46113600)
chr1 (359-398)||(1486419-1486458)
chr1 (353-399)||(7766885-7766931)
chr1 (353-399)||(18646846-18646892)
chr1 (354-399)||(168195-168240)
chr1 (353-398)||(1138572-1138617)
chr1 (359-399)||(2272343-2272383)
chr1 (353-393)||(2537697-2537737)
chr1 (359-395)||(24122022-24122058)
chr1 (359-399)||(52135129-52135169)
chr1 (364-399)||(6776148-6776183)
chr1 (359-398)||(24216977-24217016)
chr1 (370-399)||(7578419-7578448)
chr1 (354-399)||(20487348-20487393)
chr1 (354-399)||(23232423-23232468)
chr1 (354-399)||(30677170-30677215)
chr1 (359-399)||(1378744-1378784)
chr1 (359-399)||(1818733-1818773)
[»] chr8 (32 HSPs)
chr8 (353-399)||(28193471-28193517)
chr8 (353-399)||(4718642-4718688)
chr8 (354-399)||(2618184-2618229)
chr8 (354-399)||(3734781-3734826)
chr8 (354-399)||(18532105-18532150)
chr8 (354-399)||(34237813-34237858)
chr8 (359-399)||(19471612-19471652)
chr8 (359-399)||(19542536-19542576)
chr8 (359-399)||(19590120-19590160)
chr8 (359-399)||(42328008-42328048)
chr8 (352-399)||(20305904-20305951)
chr8 (352-399)||(21092537-21092584)
chr8 (352-399)||(42643276-42643323)
chr8 (354-399)||(39349254-39349299)
chr8 (359-399)||(27746493-27746533)
chr8 (348-399)||(24018374-24018425)
chr8 (354-399)||(7558101-7558146)
chr8 (354-399)||(26169006-26169051)
chr8 (359-399)||(264557-264597)
chr8 (359-399)||(651324-651364)
chr8 (359-399)||(837059-837099)
chr8 (359-399)||(8042657-8042697)
chr8 (362-398)||(41070767-41070803)
chr8 (359-398)||(34639365-34639404)
chr8 (354-399)||(775939-775984)
chr8 (354-399)||(781593-781638)
chr8 (359-396)||(15259567-15259604)
chr8 (362-399)||(28088292-28088329)
chr8 (354-399)||(32879277-32879322)
chr8 (359-399)||(8387602-8387642)
chr8 (367-399)||(21603241-21603273)
chr8 (359-399)||(34694734-34694774)
[»] chr7 (40 HSPs)
chr7 (353-399)||(27312149-27312195)
chr7 (353-399)||(18044104-18044150)
chr7 (354-399)||(2344297-2344342)
chr7 (354-399)||(2751269-2751314)
chr7 (354-399)||(7176020-7176065)
chr7 (354-399)||(7275275-7275320)
chr7 (354-399)||(21217991-21218036)
chr7 (354-399)||(23854394-23854439)
chr7 (354-399)||(40543068-40543113)
chr7 (359-399)||(2103058-2103098)
chr7 (359-399)||(13332581-13332621)
chr7 (359-399)||(22119891-22119931)
chr7 (353-399)||(10091185-10091231)
chr7 (353-399)||(27009356-27009402)
chr7 (354-399)||(17212051-17212096)
chr7 (354-399)||(21370595-21370640)
chr7 (354-399)||(25333417-25333462)
chr7 (354-399)||(31197589-31197634)
chr7 (354-399)||(31713053-31713098)
chr7 (359-399)||(7799990-7800030)
chr7 (359-399)||(28089819-28089859)
chr7 (354-398)||(28646967-28647011)
chr7 (359-398)||(12211694-12211733)
chr7 (365-399)||(42913671-42913705)
chr7 (354-399)||(11997847-11997892)
chr7 (354-399)||(32849589-32849634)
chr7 (359-399)||(577682-577722)
chr7 (359-399)||(8435853-8435893)
chr7 (359-399)||(19421234-19421274)
chr7 (359-399)||(21835154-21835194)
chr7 (359-399)||(23012666-23012706)
chr7 (359-399)||(28003839-28003879)
chr7 (359-398)||(21574262-21574301)
chr7 (353-399)||(17197108-17197154)
chr7 (353-399)||(39145810-39145856)
chr7 (370-399)||(22299863-22299892)
chr7 (365-398)||(28950877-28950910)
chr7 (359-399)||(1469115-1469155)
chr7 (359-398)||(3951149-3951189)
chr7 (359-399)||(42814867-42814907)
[»] chr3 (36 HSPs)
chr3 (351-399)||(30807311-30807359)
chr3 (353-399)||(35492904-35492950)
chr3 (353-399)||(46576341-46576387)
chr3 (354-399)||(30257618-30257663)
chr3 (354-399)||(34492733-34492778)
chr3 (354-399)||(45529912-45529957)
chr3 (359-399)||(25379760-25379800)
chr3 (359-399)||(53424334-53424374)
chr3 (353-399)||(21362936-21362982)
chr3 (353-399)||(40940818-40940864)
chr3 (353-399)||(45272574-45272620)
chr3 (354-399)||(8456308-8456353)
chr3 (354-399)||(25289872-25289917)
chr3 (354-399)||(31537996-31538041)
chr3 (354-399)||(40133607-40133652)
chr3 (354-399)||(48977382-48977427)
chr3 (354-399)||(50582986-50583031)
chr3 (354-398)||(4252555-4252599)
chr3 (359-399)||(4462632-4462672)
chr3 (359-399)||(52455807-52455847)
chr3 (357-399)||(11390599-11390641)
chr3 (361-399)||(26174114-26174152)
chr3 (353-399)||(49258420-49258466)
chr3 (354-399)||(7485683-7485728)
chr3 (354-399)||(9842915-9842960)
chr3 (354-399)||(18177045-18177090)
chr3 (353-398)||(55371444-55371489)
chr3 (359-399)||(25344215-25344255)
chr3 (367-399)||(26108299-26108331)
chr3 (359-399)||(52821793-52821833)
chr3 (364-399)||(15566657-15566692)
chr3 (364-399)||(32151428-32151463)
chr3 (354-399)||(7470373-7470418)
chr3 (354-399)||(55287797-55287842)
chr3 (359-399)||(36660769-36660809)
chr3 (355-399)||(50195437-50195481)
[»] scaffold0199 (1 HSPs)
scaffold0199 (352-399)||(8565-8612)
[»] chr6 (20 HSPs)
chr6 (352-399)||(22576059-22576106)
chr6 (353-399)||(34147339-34147385)
chr6 (353-399)||(34159955-34160001)
chr6 (354-399)||(9238969-9239014)
chr6 (354-399)||(12591631-12591676)
chr6 (354-399)||(15360256-15360301)
chr6 (360-399)||(11448871-11448910)
chr6 (352-399)||(33499466-33499513)
chr6 (353-399)||(3222792-3222838)
chr6 (353-399)||(21148668-21148714)
chr6 (354-399)||(13753234-13753279)
chr6 (359-399)||(9843937-9843977)
chr6 (359-399)||(21982478-21982518)
chr6 (359-398)||(8479311-8479350)
chr6 (353-399)||(11007158-11007204)
chr6 (353-399)||(28672060-28672106)
chr6 (354-399)||(5360229-5360274)
chr6 (352-399)||(9208244-9208291)
chr6 (354-399)||(654304-654349)
chr6 (354-399)||(33718616-33718661)
[»] chr5 (36 HSPs)
chr5 (352-399)||(32059598-32059645)
chr5 (353-399)||(13108607-13108653)
chr5 (354-399)||(22392695-22392740)
chr5 (354-399)||(23270680-23270725)
chr5 (354-399)||(25586926-25586971)
chr5 (359-399)||(4603776-4603816)
chr5 (359-399)||(8484819-8484859)
chr5 (359-399)||(38631119-38631159)
chr5 (352-399)||(15641263-15641310)
chr5 (353-399)||(11926660-11926706)
chr5 (353-399)||(13038612-13038658)
chr5 (354-399)||(3715067-3715112)
chr5 (354-399)||(12317308-12317353)
chr5 (354-399)||(15931053-15931098)
chr5 (354-399)||(31288104-31288149)
chr5 (354-399)||(37397707-37397752)
chr5 (359-399)||(25750769-25750809)
chr5 (359-399)||(36954817-36954857)
chr5 (352-399)||(6014438-6014484)
chr5 (359-398)||(19145570-19145609)
chr5 (364-399)||(33709659-33709694)
chr5 (353-399)||(1827688-1827734)
chr5 (353-399)||(27498889-27498935)
chr5 (354-399)||(7085784-7085829)
chr5 (354-399)||(30485822-30485867)
chr5 (353-398)||(33025473-33025518)
chr5 (354-399)||(34049816-34049861)
chr5 (354-399)||(34310136-34310181)
chr5 (359-399)||(15971280-15971320)
chr5 (359-399)||(42006792-42006832)
chr5 (359-393)||(22253309-22253343)
chr5 (361-399)||(38684209-38684247)
chr5 (355-396)||(2499339-2499380)
chr5 (361-398)||(19230476-19230513)
chr5 (366-399)||(42193491-42193524)
chr5 (359-399)||(27487713-27487753)
[»] scaffold0576 (1 HSPs)
scaffold0576 (354-399)||(5240-5285)
[»] scaffold0217 (1 HSPs)
scaffold0217 (354-399)||(7467-7512)
[»] chr4 (31 HSPs)
chr4 (354-399)||(5609360-5609405)
chr4 (354-399)||(25852208-25852253)
chr4 (354-399)||(32986191-32986236)
chr4 (354-399)||(34722164-34722209)
chr4 (354-399)||(40059010-40059055)
chr4 (354-399)||(46714386-46714431)
chr4 (354-399)||(54127500-54127545)
chr4 (359-399)||(20566348-20566388)
chr4 (353-399)||(19660690-19660736)
chr4 (353-399)||(33696437-33696483)
chr4 (354-399)||(1985830-1985875)
chr4 (354-399)||(22625228-22625273)
chr4 (354-399)||(35674899-35674944)
chr4 (354-399)||(52983613-52983658)
chr4 (359-399)||(13873453-13873493)
chr4 (364-399)||(35229172-35229207)
chr4 (353-399)||(44343506-44343553)
chr4 (360-399)||(55961900-55961939)
chr4 (353-399)||(41621754-41621800)
chr4 (362-399)||(27528953-27528990)
chr4 (358-399)||(32942368-32942409)
chr4 (354-399)||(34844916-34844961)
chr4 (359-396)||(45787864-45787901)
chr4 (359-399)||(34835528-34835568)
chr4 (359-399)||(42245745-42245785)
chr4 (359-399)||(51535612-51535652)
chr4 (361-399)||(10125783-10125821)
chr4 (353-399)||(36131668-36131714)
chr4 (354-399)||(33992620-33992665)
chr4 (358-398)||(9646375-9646415)
chr4 (359-399)||(43719223-43719263)
[»] chr2 (24 HSPs)
chr2 (354-399)||(18976583-18976628)
chr2 (359-398)||(8192510-8192549)
chr2 (348-399)||(11941368-11941419)
chr2 (354-397)||(33827733-33827776)
chr2 (354-399)||(44946211-44946256)
chr2 (351-395)||(24195995-24196039)
chr2 (359-395)||(44976316-44976352)
chr2 (353-399)||(30466988-30467034)
chr2 (350-399)||(4567595-4567644)
chr2 (354-399)||(15037953-15037998)
chr2 (354-399)||(27269508-27269553)
chr2 (354-399)||(32845085-32845130)
chr2 (362-398)||(4618844-4618880)
chr2 (359-399)||(17324765-17324805)
chr2 (353-393)||(20297556-20297596)
chr2 (353-399)||(6714439-6714485)
chr2 (364-398)||(19606004-19606038)
chr2 (354-392)||(36390731-36390769)
chr2 (353-399)||(41313985-41314031)
chr2 (354-399)||(25293160-25293205)
chr2 (370-399)||(27290598-27290627)
chr2 (359-399)||(918857-918897)
chr2 (359-399)||(4852557-4852597)
chr2 (359-399)||(41329842-41329882)
[»] scaffold0623 (1 HSPs)
scaffold0623 (359-399)||(1214-1254)
[»] scaffold0459 (1 HSPs)
scaffold0459 (359-399)||(10851-10891)
[»] scaffold0366 (2 HSPs)
scaffold0366 (359-399)||(9457-9497)
scaffold0366 (359-399)||(12158-12198)
[»] scaffold0240 (1 HSPs)
scaffold0240 (353-399)||(12912-12958)
[»] scaffold0068 (1 HSPs)
scaffold0068 (353-399)||(41802-41848)
[»] scaffold0328 (1 HSPs)
scaffold0328 (354-399)||(14985-15030)
[»] scaffold0070 (1 HSPs)
scaffold0070 (354-399)||(40319-40364)
[»] scaffold0026 (1 HSPs)
scaffold0026 (354-399)||(97524-97569)
[»] scaffold0051 (1 HSPs)
scaffold0051 (359-399)||(53029-53069)
[»] scaffold0200 (1 HSPs)
scaffold0200 (354-399)||(26701-26746)
[»] scaffold0049 (1 HSPs)
scaffold0049 (354-399)||(66756-66801)
[»] scaffold0717 (1 HSPs)
scaffold0717 (365-399)||(116-150)
[»] scaffold0460 (1 HSPs)
scaffold0460 (354-399)||(8337-8382)
[»] scaffold0438 (1 HSPs)
scaffold0438 (360-393)||(5052-5085)
[»] scaffold0160 (1 HSPs)
scaffold0160 (357-394)||(29305-29342)
[»] scaffold0028 (1 HSPs)
scaffold0028 (354-399)||(27770-27815)


Alignment Details
Target: chr1 (Bit Score: 343; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 5373058 - 5373432
Alignment:
Q  1 tgcagattgataatgtctctgttgtgctgttggataaccttatcttgcttatattatagctatttaaaaaatttcaggaatgagctttttcttgaagact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5373058 tgcagattgataatgtctctgttgtgctgttggataaccttatcttgcttatattatagctatttaaaaaatttcaggaatgagctttttcttgaagact 5373157  T
Q  101 tcttttgagaacaaaatgagtgaattgtaggtacaaaatgcatatataaatagtatttgtcttagcttgtccttgttgtttctcctttacctggttaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5373158 tcttttgagaacaaaatgagtgaattgtaggtacaaaatgcatatataaatagtatttgtcttagcttgtccttgttgtttctcctttacctggttaaat 5373257  T
Q  201 aattgaaagagtcatataatcatcatttcacacgcccaaccatagttctcaaaaagcaaaagaatcccccctccnnnnnnncttcttctctatgattgag 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  5373258 aattgaaagagtcatatagtcatcatttcacacgcccaaccatagttctcaaaaagcaaaagaatcccccctccttttttt-ttcttctctatgattgag 5373356  T
Q  301 tgcagtgtaccactaaattttcttaattcaaaagaatagtatacggatgagataacctatttggggttggcctagt 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5373357 tgcagtgtaccactaaattttcttaattcaaaagaatagtatacggatgagataacctatttggggttggcctagt 5373432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 8077640 - 8077686
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  8077640 taacccatttggggttggcctagtggttggcttgggatcttggagtt 8077686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 24674386 - 24674432
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  24674386 taacccatttggggttggcctagtggttggcttgggatcttggagtt 24674432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 4621440 - 4621395
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  4621440 aacccatttggggttggcctagtggttggcttgggatcttggagtt 4621395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7197449 - 7197404
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagtt 7197404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 34778336 - 34778381
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagtt 34778381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 27455070 - 27455024
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27455070 taacccatttggggttggtctagtggttggcttgggatcttggagtt 27455024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 14258630 - 14258585
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||    
T  14258630 aacccatttgggcttggcctagtggttggcttgggatcttggagtt 14258585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 15059605 - 15059560
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtt 15059560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 29057540 - 29057495
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  29057540 aacccatttggggttggcctagtggttggtttgggatcttggagtt 29057495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 32729539 - 32729584
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtt 32729584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 46607804 - 46607849
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtt 46607849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 47091684 - 47091729
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  47091684 aacccatttggggttggcctagtggttggcttgagatcttggagtt 47091729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 1095194 - 1095154
Alignment:
Q  358 tatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  1095194 tatttggggttggtctagtggttggcttgggatcttggagt 1095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 25496692 - 25496648
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggag 397  Q
    |||||||||||| |||||||||||| |||||||||||||||||||    
T  25496692 taacctatttggcgttggcctagtgattggcttgggatcttggag 25496648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 46113600 - 46113560
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtt 46113560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 398
Target Start/End: Original strand, 1486419 - 1486458
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  1486419 atttggggttgacctagtggttggcttgggatcttggagt 1486458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 7766931 - 7766885
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  7766931 taacccattcggggttggcctagtggttagcttgggatcttggagtt 7766885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 18646846 - 18646892
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  18646846 taacctatttggggttgacctagtggttggcttgtgatctttgagtt 18646892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 168195 - 168240
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||    
T  168195 aacccatttggagttggcctagtggttggcttgggatcttagagtt 168240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 1138572 - 1138617
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||    
T  1138572 taacccatttggggttgacctagtggttggcttgagatcttggagt 1138617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 2272343 - 2272383
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  2272343 atttggggttggcctagtggttgacttgggatcttagagtt 2272383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 2537697 - 2537737
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatctt 393  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  2537697 taacccatttggggttggcctagtggttggattgggatctt 2537737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 24122022 - 24122058
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttgg 395  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24122022 atttggggttggcttagtggttggcttgggatcttgg 24122058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 52135129 - 52135169
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  52135129 atttggggttggtctagtggttgacttgggatcttggagtt 52135169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 364 - 399
Target Start/End: Original strand, 6776148 - 6776183
Alignment:
Q  364 gggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||| ||||||||||||||||    
T  6776148 gggttggcctagtggttggtttgggatcttggagtt 6776183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 398
Target Start/End: Original strand, 24216977 - 24217016
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  24216977 atttggggttgacctagtggttgacttgggatcttggagt 24217016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 399
Target Start/End: Original strand, 7578419 - 7578448
Alignment:
Q  370 gcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||||||    
T  7578419 gcctagtggttggcttgggatcttggagtt 7578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 20487393 - 20487348
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||  |||||||||||| ||||||||||||||    
T  20487393 aacccatttggggttggtttagtggttggctcgggatcttggagtt 20487348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 23232468 - 23232423
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||| ||||||||||||||| |||||||||||| ||||    
T  23232468 aacccatttgggattggcctagtggttgacttgggatcttgaagtt 23232423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30677170 - 30677215
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||| |||||||||||| ||||||||| ||||||    
T  30677170 aacccatttggggttgacctagtggttggtttgggatctaggagtt 30677215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 1378744 - 1378784
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| |||||||||| ||||| |||||||||||    
T  1378744 atttggggttggtctagtggttgacttggaatcttggagtt 1378784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 1818733 - 1818773
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||| || |||||||| |||||||||||||    
T  1818733 atttggggttggcctggtagttggcttaggatcttggagtt 1818773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 28193471 - 28193517
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28193471 taacctatttggggttggcctagtggttggcttgggatcttggagtt 28193517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 4718642 - 4718688
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  4718642 taacccatttggggttggcctagtggttggcttgggatcttggagtt 4718688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 2618184 - 2618229
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  2618184 aacccatttggggttggcctagtggttggcttgggatcttggagtt 2618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 3734826 - 3734781
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  3734826 aacccatttggggttggcctagtggttggcttgggatcttggagtt 3734781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 18532105 - 18532150
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  18532105 aacccatttggggttggcctagtggttggcttgggatcttggagtt 18532150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34237858 - 34237813
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  34237858 aacccatttggggttggcctagtggttggcttgggatcttggagtt 34237813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 19471612 - 19471652
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19471612 atttggggttggcctagtggttggcttgggatcttggagtt 19471652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 19542536 - 19542576
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19542536 atttggggttggcctagtggttggcttgggatcttggagtt 19542576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 19590160 - 19590120
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19590160 atttggggttggcctagtggttggcttgggatcttggagtt 19590120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 42328008 - 42328048
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42328008 atttggggttggcctagtggttggcttgggatcttggagtt 42328048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 20305904 - 20305951
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  20305904 ataacccatttggggttggcctagtggttggcttgggatcttagagtt 20305951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 21092537 - 21092584
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  21092537 ataacccatttggggttggcctagtggttggcttgggatcttagagtt 21092584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 42643323 - 42643276
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  42643323 ataacccatttggggttggcctagtggttgacttgggatcttggagtt 42643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 39349254 - 39349299
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtt 39349299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 27746533 - 27746493
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27746533 atttggggttggcctagtggttggtttgggatcttggagtt 27746493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 24018374 - 24018425
Alignment:
Q  348 tgagataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||||||||  |||||||||| |||||||||||||||||    
T  24018374 tgagaaaacctatttggggttgatctagtggttgacttgggatcttggagtt 24018425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7558146 - 7558101
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||    
T  7558146 aacccatttggggttggcctagtagttagcttgggatcttggagtt 7558101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 26169051 - 26169006
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||||    
T  26169051 aacccatttagggttggcctagtggtttgcttgggatcttggagtt 26169006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 264597 - 264557
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagtt 264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 651324 - 651364
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagtt 651364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 837059 - 837099
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagtt 837099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 8042657 - 8042697
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  8042657 atttggggttgacctagtgcttggcttgggatcttggagtt 8042697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 41070767 - 41070803
Alignment:
Q  362 tggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||||||||||||| ||||||||||||||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagt 41070803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 34639404 - 34639365
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  34639404 atttggggttagtctagtggttggcttgggatcttggagt 34639365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 775984 - 775939
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| | | ||||||||||||||||||||||||    
T  775984 aaccaatttggggttggtccaatggttggcttgggatcttggagtt 775939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 781638 - 781593
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| | | ||||||||||||||||||||||||    
T  781638 aaccaatttggggttggtccaatggttggcttgggatcttggagtt 781593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 396
Target Start/End: Complemental strand, 15259604 - 15259567
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttgga 396  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  15259604 atttggggttggtctagtggttggtttgggatcttgga 15259567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 399
Target Start/End: Original strand, 28088292 - 28088329
Alignment:
Q  362 tggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  28088292 tggggttggcttagtggttgacttgggatcttggagtt 28088329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 32879277 - 32879322
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| |||||||||| ||||||||||| |||||    
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagtt 32879322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 8387642 - 8387602
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| |||| |||||| |||||    
T  8387642 atttggggttggcctagtggttgtcttgagatcttagagtt 8387602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 399
Target Start/End: Original strand, 21603241 - 21603273
Alignment:
Q  367 ttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||| |||||    
T  21603241 ttggcctagtggttggcttgggatcttagagtt 21603273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 34694774 - 34694734
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| |||||||||| |||| ||||||||||||    
T  34694774 atttggggttggtctagtggttgacttgtgatcttggagtt 34694734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 27312149 - 27312195
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27312149 taacctatttggggttggcctagtggttggcttgggatcttggagtt 27312195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 18044104 - 18044150
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  18044104 taacccatttggggttggcctagtggttggcttgggatcttggagtt 18044150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 2344297 - 2344342
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  2344297 aacccatttggggttggcctagtggttggcttgggatcttggagtt 2344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 2751269 - 2751314
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  2751269 aacccatttggggttggcctagtggttggcttgggatcttggagtt 2751314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7176065 - 7176020
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  7176065 aacccatttggggttggcctagtggttggcttgggatcttggagtt 7176020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 7275275 - 7275320
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagtt 7275320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 21218036 - 21217991
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  21218036 aacccatttggggttggcctagtggttggcttgggatcttggagtt 21217991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 23854394 - 23854439
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagtt 23854439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 40543113 - 40543068
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  40543113 aacccatttggggttggcctagtggttggcttgggatcttggagtt 40543068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 2103058 - 2103098
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2103058 atttggggttggcctagtggttggcttgggatcttggagtt 2103098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 13332621 - 13332581
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13332621 atttggggttggcctagtggttggcttgggatcttggagtt 13332581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 22119891 - 22119931
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22119891 atttggggttggcctagtggttggcttgggatcttggagtt 22119931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 10091185 - 10091231
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  10091185 taacccatttggggttggtctagtggttggcttgggatcttggagtt 10091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 27009356 - 27009402
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  27009356 taacccatttggggttggcctagtggttggcttcggatcttggagtt 27009402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 17212051 - 17212096
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagtt 17212096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 21370595 - 21370640
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  21370595 aacccatttggggttggcctagtggttggtttgggatcttggagtt 21370640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 25333417 - 25333462
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||    
T  25333417 aacccatttggggttggcttagtggttggcttgggatcttggagtt 25333462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 31197589 - 31197634
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  31197589 aacccatttggggttggtctagtggttggcttgggatcttggagtt 31197634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 31713098 - 31713053
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  31713098 aacccatttggggttggcctagtggttggtttgggatcttggagtt 31713053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 7800030 - 7799990
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  7800030 atttggggttgacctagtggttggcttgggatcttggagtt 7799990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 28089819 - 28089859
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  28089819 atttggggttggcctagtggttggcttgagatcttggagtt 28089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 28646967 - 28647011
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  28646967 aacctatttggggttggcctagtgattgacttgggatcttggagt 28647011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 12211733 - 12211694
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  12211733 atttggggttggcctagtggttggcttaggatcttggagt 12211694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 365 - 399
Target Start/End: Complemental strand, 42913705 - 42913671
Alignment:
Q  365 ggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||    
T  42913705 ggttggcctagtggttggcttgggatcttggagtt 42913671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 11997847 - 11997892
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||| |||||| ||||||||||||||||||||||||||||    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtt 11997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 32849589 - 32849634
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  32849589 aacccatttggggttagcctagtggttgacttgggatcttggagtt 32849634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 577682 - 577722
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  577682 atttggggttggcctagtggtttgcttgggatcttagagtt 577722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 8435893 - 8435853
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  8435893 atttggggttggtctagtggttgacttgggatcttggagtt 8435853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 19421234 - 19421274
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  19421234 atttggggttgacttagtggttggcttgggatcttggagtt 19421274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 21835154 - 21835194
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  21835154 atttagggttgacctagtggttggcttgggatcttggagtt 21835194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 23012706 - 23012666
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  23012706 atttagggttggcccagtggttggcttgggatcttggagtt 23012666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 28003839 - 28003879
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  28003839 atttggggttgatctagtggttggcttgggatcttggagtt 28003879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 21574301 - 21574262
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  21574301 atttggggttggcctagtggttggtttgggattttggagt 21574262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 17197154 - 17197108
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||| |||||||||||||| ||| ||||||||||||    
T  17197154 taacccatttggggtcggcctagtggttggtttgcgatcttggagtt 17197108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 39145856 - 39145810
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||| ||||| ||||||||||| |||||||||||||||||    
T  39145856 taacccatttgaggttgacctagtggttgacttgggatcttggagtt 39145810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 399
Target Start/End: Original strand, 22299863 - 22299892
Alignment:
Q  370 gcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||||||    
T  22299863 gcctagtggttggcttgggatcttggagtt 22299892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 398
Target Start/End: Original strand, 28950877 - 28950910
Alignment:
Q  365 ggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||||||||||||||||| |||||||||    
T  28950877 ggttggcctagtggttggcttggggtcttggagt 28950910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 1469115 - 1469155
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| ||||  |||||||||||    
T  1469115 atttggggttggcctagtggttgacttgaaatcttggagtt 1469155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 3951189 - 3951149
Alignment:
Q  359 atttggggttggcctagtggttggctt-gggatcttggagt 398  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  3951189 atttggggttggtctagtggttggcttggggatcttggagt 3951149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 42814867 - 42814907
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||| ||||||||| |||||||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtt 42814907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 30807359 - 30807311
Alignment:
Q  351 gataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30807359 gataacccatttggggttggcctagtggttggcttgggatcttggagtt 30807311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 35492904 - 35492950
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  35492904 taacccatttggggttggcctagtggttggcttgggatcttggagtt 35492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 46576341 - 46576387
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  46576341 taacccatttggggttggcctagtggttggcttgggatcttggagtt 46576387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30257618 - 30257663
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  30257618 aacccatttggggttggcctagtggttggcttgggatcttggagtt 30257663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34492778 - 34492733
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagtt 34492733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 45529957 - 45529912
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  45529957 aacccatttggggttggcctagtggttggcttgggatcttggagtt 45529912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 25379760 - 25379800
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtt 25379800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 53424374 - 53424334
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  53424374 atttggggttggcctagtggttggcttgggatcttggagtt 53424334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 21362936 - 21362982
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  21362936 taacccatttggggttggcctagtggttgacttgggatcttggagtt 21362982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 40940818 - 40940864
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  40940818 taacccatttggggttggtctagtggttggcttgggatcttggagtt 40940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 45272620 - 45272574
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45272620 taacccatttggggttggcctagtcgttggcttgggatcttggagtt 45272574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 8456353 - 8456308
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtt 8456308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 25289917 - 25289872
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtt 25289872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 31538041 - 31537996
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagtt 31537996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 40133652 - 40133607
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||    
T  40133652 aacccatttggggttggcctagtggttggcttgggattttggagtt 40133607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 48977382 - 48977427
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  48977382 aacccatttggggttggcctagtggttgacttgggatcttggagtt 48977427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 50582986 - 50583031
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  50582986 aacccatttggggttggcctagtggttggtttgggatcttggagtt 50583031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 4252599 - 4252555
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  4252599 aacccatttggggttggcctagtggttggcttgagatcttggagt 4252555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 4462632 - 4462672
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  4462632 atttggggttggcctagtggttggcttgagatcttggagtt 4462672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 52455847 - 52455807
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  52455847 atttggggttggcctagtggttggctagggatcttggagtt 52455807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 399
Target Start/End: Original strand, 11390599 - 11390641
Alignment:
Q  357 ctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  11390599 ctatttggggttggcctagtggttggtttgagatcttggagtt 11390641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 26174114 - 26174152
Alignment:
Q  361 ttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  26174114 ttggagttggcctagtggttggcttgggatcttggagtt 26174152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 49258466 - 49258420
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  49258466 taacccatttggggtttgcctagtggttggcttgggatcttgcagtt 49258420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7485728 - 7485683
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||    
T  7485728 aacccatttggggttggcatagtggttgacttgggatcttggagtt 7485683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9842915 - 9842960
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||    
T  9842915 aacccatttggggttggtctagtggttggtttgggatcttggagtt 9842960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 18177090 - 18177045
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||    
T  18177090 aacccatttggggttggcctagtggttgacttgagatcttggagtt 18177045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 398
Target Start/End: Complemental strand, 55371489 - 55371444
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||    
T  55371489 taacctatttgaggttggcctagtggttggcttgcgattttggagt 55371444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 25344255 - 25344215
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  25344255 atttggggttggcctagtggttgacttgggatcttcgagtt 25344215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 399
Target Start/End: Original strand, 26108299 - 26108331
Alignment:
Q  367 ttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtt 26108331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 52821833 - 52821793
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtt 52821793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 364 - 399
Target Start/End: Complemental strand, 15566692 - 15566657
Alignment:
Q  364 gggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| ||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtt 15566657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 364 - 399
Target Start/End: Original strand, 32151428 - 32151463
Alignment:
Q  364 gggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||| |||||||||||||||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtt 32151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7470418 - 7470373
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||| |||||||||||| |||| ||||||||||||    
T  7470418 aacccatttggggtttgcctagtggttgacttgagatcttggagtt 7470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 55287797 - 55287842
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||| ||||||||||||||| ||||| |||||    
T  55287797 aacccatttggggttggcatagtggttggcttggaatcttagagtt 55287842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 36660769 - 36660809
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||| |||||||||||| || |||||||||||||    
T  36660769 atttggggttgacctagtggttggtttaggatcttggagtt 36660809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 50195481 - 50195437
Alignment:
Q  355 acctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||| || ||||||||| |||||||||||||||||    
T  50195481 acctgtttggggttagcatagtggttgtcttgggatcttggagtt 50195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 8612 - 8565
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8612 ataacccatttggggttggcctagtggttggcttgggatcttggagtt 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 22576059 - 22576106
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  22576059 ataacccatttggggttggcctagtggttggcttgggatcttggagtt 22576106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 34147339 - 34147385
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34147339 taacccatttggggttggcctagtggttggcttgggatcttggagtt 34147385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 34159955 - 34160001
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34159955 taacccatttggggttggcctagtggttggcttgggatcttggagtt 34160001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 9238969 - 9239014
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  9238969 aacccatttggggttggcctagtggttggcttgggatcttggagtt 9239014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 12591631 - 12591676
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagtt 12591676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 15360301 - 15360256
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  15360301 aacccatttggggttggcctagtggttggcttgggatcttggagtt 15360256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 11448871 - 11448910
Alignment:
Q  360 tttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtt 11448910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 33499466 - 33499513
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  33499466 ataacccatttggggttggcctggtggttggcttgggatcttggagtt 33499513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 3222838 - 3222792
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  3222838 taacccatttggggttggcctagtggttggcttgggatcttgcagtt 3222792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 21148714 - 21148668
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  21148714 taacccatttggagttggcctagtggttggcttgggatcttggagtt 21148668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 13753234 - 13753279
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||    
T  13753234 aacccatttggggttggcctagtggttggctttggatcttggagtt 13753279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 9843937 - 9843977
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  9843937 atttggggttggtctagtggttggcttgggatcttggagtt 9843977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 21982518 - 21982478
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  21982518 atttggggttggcctagtggttggcttgggatcttgaagtt 21982478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 398
Target Start/End: Original strand, 8479311 - 8479350
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8479311 atttggggttggcctagtggttgacttgggatcttggagt 8479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 11007158 - 11007204
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||    
T  11007158 taacccatttggggttgatctagtggttggcttgggatcttggagtt 11007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 28672060 - 28672106
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  28672060 taacccatttggggttggcctagtggttgacttgagatcttggagtt 28672106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 5360274 - 5360229
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||    
T  5360274 aacccatttggagttggcctggtggttggcttgggatcttggagtt 5360229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 9208244 - 9208291
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||  ||||||||||| ||||||||||||||||    
T  9208244 ataacccatttggggttgttctagtggttggattgggatcttggagtt 9208291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 654349 - 654304
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||| |||||||||||| || |||||||||||||||||    
T  654349 aacccatttgggtttggcctagtggctgacttgggatcttggagtt 654304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 33718661 - 33718616
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||| ||||||| ||||||||||| ||||||||||||||||    
T  33718661 aacccatttagggttggtctagtggttggtttgggatcttggagtt 33718616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 32059645 - 32059598
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  32059645 ataacccatttggggttggcctagtggttggcttgggatcttggagtt 32059598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 13108653 - 13108607
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  13108653 taacccatttggggttggcctagtggttggcttgggatcttggagtt 13108607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 22392695 - 22392740
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagtt 22392740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 23270725 - 23270680
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  23270725 aacccatttggggttggcctagtggttggcttgggatcttggagtt 23270680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 25586926 - 25586971
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  25586926 aacccatttggggttggcctagtggttggcttgggatcttggagtt 25586971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 4603776 - 4603816
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4603776 atttggggttggcctagtggttggcttgggatcttggagtt 4603816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 8484859 - 8484819
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8484859 atttggggttggcctagtggttggcttgggatcttggagtt 8484819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 38631159 - 38631119
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38631159 atttggggttggcctagtggttggcttgggatcttggagtt 38631119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 15641310 - 15641263
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  15641310 ataacccatttggggttagcctagtggttggcttgggatcttggagtt 15641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 11926706 - 11926660
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  11926706 taacccatttggggttggcctagtggttggtttgggatcttggagtt 11926660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 13038658 - 13038612
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13038658 taacccatttggggttggcctagtggttggtttgggatcttggagtt 13038612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 3715112 - 3715067
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||    
T  3715112 aaccaatttggggttggcctagtggttggtttgggatcttggagtt 3715067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 12317353 - 12317308
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  12317353 aacccatttggggttggcctagtggttggcttggaatcttggagtt 12317308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 15931053 - 15931098
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  15931053 aacccatttggggttggcctagtggttagcttgggatcttggagtt 15931098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 31288149 - 31288104
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||    
T  31288149 aacccattttgggttggcctagtggttggcttgggatcttggagtt 31288104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 37397707 - 37397752
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  37397707 aacctatttggggttggtctagtggttggcttgtgatcttggagtt 37397752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 25750809 - 25750769
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  25750809 atttggggttggcctagtggttgacttgggatcttggagtt 25750769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 36954817 - 36954857
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  36954817 atttggggttggcctagtggttgccttgggatcttggagtt 36954857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 6014484 - 6014438
Alignment:
Q  352 ataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  6014484 ataacctatttggg-ttggcctagtgattggcttgggatcttggagtt 6014438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 19145609 - 19145570
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  19145609 atttggggttggcctagtggttgacttgggatcttggagt 19145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 399
Target Start/End: Complemental strand, 33709694 - 33709659
Alignment:
Q  364 gggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||||||||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtt 33709659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 1827734 - 1827688
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  1827734 taacccatttggggttgacctagtggttggcttgagatcttggagtt 1827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 27498935 - 27498889
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  27498935 taacccatttggggttgacctagtggttggcttggaatcttggagtt 27498889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7085829 - 7085784
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||| |||| |||||||||||||||||||||||||||    
T  7085829 aacccatttggggctggcttagtggttggcttgggatcttggagtt 7085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 30485822 - 30485867
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||| || |||||||||||||||||||||||    
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtt 30485867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 33025473 - 33025518
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||    
T  33025473 taacccatttggggttggcctcgcggttggcttgggatcttggagt 33025518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 34049816 - 34049861
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||    
T  34049816 aacccatttggggttgggctagtagttggcttgggatcttggagtt 34049861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 34310136 - 34310181
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||| ||||||| |||||||||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagtt 34310181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 15971320 - 15971280
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  15971320 atttagggttggcttagtggttggcttgggatcttggagtt 15971280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 42006792 - 42006832
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  42006792 atttggggttgggctagtggttggcttgagatcttggagtt 42006832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 393
Target Start/End: Complemental strand, 22253343 - 22253309
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatctt 393  Q
    |||||||||||| ||||||||||||||||||||||    
T  22253343 atttggggttggtctagtggttggcttgggatctt 22253309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 38684209 - 38684247
Alignment:
Q  361 ttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  38684209 ttggggttggcccagtggttgacttgggatcttggagtt 38684247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 396
Target Start/End: Complemental strand, 2499380 - 2499339
Alignment:
Q  355 acctatttggggttggcctagtggttggcttgggatcttgga 396  Q
    ||||||||||||||||| |||||| || ||||||||||||||    
T  2499380 acctatttggggttggcttagtggctgacttgggatcttgga 2499339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 398
Target Start/End: Original strand, 19230476 - 19230513
Alignment:
Q  361 ttggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||||||||||||| | |||||||||||||||    
T  19230476 ttggggttggcctagtggttagtttgggatcttggagt 19230513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 399
Target Start/End: Original strand, 42193491 - 42193524
Alignment:
Q  366 gttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||| |||||||||||||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtt 42193524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 27487753 - 27487713
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  27487753 atttggggttggcctagtggttgatttgggattttggagtt 27487713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 5285 - 5240
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  5285 aacccatttggggttggcctagtggttggcttgggatcttggagtt 5240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 7512 - 7467
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  7512 aacctatttggggttggcctagtagttggcttgggatcttggagtt 7467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 5609405 - 5609360
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  5609405 aacccatttggggttggcctagtggttggcttgggatcttggagtt 5609360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 25852208 - 25852253
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  25852208 aacccatttggggttggcctagtggttggcttgggatcttggagtt 25852253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 32986191 - 32986236
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagtt 32986236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 34722164 - 34722209
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  34722164 aacctatttggggttggcttagtggttggcttgggatcttggagtt 34722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 40059055 - 40059010
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  40059055 aacccatttggggttggcctagtggttggcttgggatcttggagtt 40059010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 46714386 - 46714431
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  46714386 aacccatttggggttggcctagtggttggcttgggatcttggagtt 46714431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 54127545 - 54127500
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagtt 54127500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 20566348 - 20566388
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20566348 atttggggttggcctagtggttggcttgggatcttggagtt 20566388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 19660736 - 19660690
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19660736 taacccatttggagttggcctagtggttggcttgggatcttggagtt 19660690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 33696483 - 33696437
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||    
T  33696483 taacccatttagggttggcctagtggttggcttgggatcttggagtt 33696437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 1985830 - 1985875
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagtt 1985875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 22625273 - 22625228
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  22625273 aacccatttgaggttggcctagtggttggcttgggatcttggagtt 22625228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 35674944 - 35674899
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagtt 35674899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 52983613 - 52983658
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  52983613 aacccatttggggttggcctagtggttggcttgagatcttggagtt 52983658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 13873493 - 13873453
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  13873493 atttggggttggcctagtggtttgcttgggatcttggagtt 13873453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 364 - 399
Target Start/End: Original strand, 35229172 - 35229207
Alignment:
Q  364 gggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtt 35229207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 44343506 - 44343553
Alignment:
Q  353 taacctatttggggttggcctagtgg-ttggcttgggatcttggagtt 399  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  44343506 taacctatttggggttgggctagtggtttggcttgggatcttggagtt 44343553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 399
Target Start/End: Complemental strand, 55961939 - 55961900
Alignment:
Q  360 tttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagtt 55961900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 41621800 - 41621754
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  41621800 taacccatttggggttggcctaatggttggcttgagatcttggagtt 41621754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 27528990 - 27528953
Alignment:
Q  362 tggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||| |||||||||||||||||||||||||||    
T  27528990 tggggttggcttagtggttggcttgggatcttggagtt 27528953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 32942368 - 32942409
Alignment:
Q  358 tatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  32942368 tatttggggttggtctagtggttggcttgagatcttggagtt 32942409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 34844961 - 34844916
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||    
T  34844961 aacccatttggggttggcctagtggtttgcttgagatcttggagtt 34844916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 396
Target Start/End: Complemental strand, 45787901 - 45787864
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttgga 396  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  45787901 atttggggttggcctagtggttggcttggaatcttgga 45787864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 34835528 - 34835568
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  34835528 atttggggttggtctagtggttggcttgggatcttagagtt 34835568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 42245745 - 42245785
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  42245745 atttggggttggcctagtggttgacttgggatcttagagtt 42245785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 51535612 - 51535652
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  51535612 atttagggttggcctagtggttgacttgggatcttggagtt 51535652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 399
Target Start/End: Original strand, 10125783 - 10125821
Alignment:
Q  361 ttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  10125783 ttggagttggcctagtggttgacttgggatcttggagtt 10125821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 36131714 - 36131668
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  36131714 taacccatttggggttggcatagtggtttgcttgggattttggagtt 36131668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 33992620 - 33992665
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||| |||||| |||||||||||| ||||||||||||||||    
T  33992620 aacccatttagggttgacctagtggttggtttgggatcttggagtt 33992665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 9646415 - 9646375
Alignment:
Q  358 tatttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||||| ||||||||||| |||||||||| ||||    
T  9646415 tatttggggttggtctagtggttggtttgggatctttgagt 9646375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 43719263 - 43719223
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||| ||||||||||| ||| ||||||||||||    
T  43719263 atttggggttggtctagtggttggtttgagatcttggagtt 43719223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 18976628 - 18976583
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  18976628 aacccatttggggttggcctagtggttggcttgggatcttggagtt 18976583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 8192549 - 8192510
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagt 398  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8192549 atttggggttggcctagtggttggcttgggatcttggagt 8192510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 11941419 - 11941368
Alignment:
Q  348 tgagataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11941419 tgagttaacccatttggggttggtctagtggttggcttgggatcttggagtt 11941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 397
Target Start/End: Complemental strand, 33827776 - 33827733
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggag 397  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggag 33827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 44946256 - 44946211
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtt 44946211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 351 - 395
Target Start/End: Original strand, 24195995 - 24196039
Alignment:
Q  351 gataacctatttggggttggcctagtggttggcttgggatcttgg 395  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  24195995 gataacccatttggggttggcctagtggttggcttgggattttgg 24196039  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 44976352 - 44976316
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttgg 395  Q
    |||||||||||||||||||||||||||||||||||||    
T  44976352 atttggggttggcctagtggttggcttgggatcttgg 44976316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 30467034 - 30466988
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  30467034 taacccatttggggttggcctagtggttggtttgggatattggagtt 30466988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 4567644 - 4567595
Alignment:
Q  350 agataacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||| | |||||||||||||||||| ||||||||||||||||| ||||    
T  4567644 agataatccatttggggttggcctagtagttggcttgggatcttgaagtt 4567595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 15037953 - 15037998
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtt 15037998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 27269553 - 27269508
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  27269553 aacccatttggggttggcatagtggttggcttgggatcttcgagtt 27269508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 32845085 - 32845130
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||    
T  32845085 aacccatttggggttggcctagtagttagcttgggatcttggagtt 32845130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 398
Target Start/End: Complemental strand, 4618880 - 4618844
Alignment:
Q  362 tggggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4618880 tggggttggcctagtggttggcttggaatcttggagt 4618844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 17324765 - 17324805
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  17324765 atttggggttggcctagtggttggtttggtatcttggagtt 17324805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 20297556 - 20297596
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatctt 393  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  20297556 taacccatttggggttggcccagtggttggcttgggatctt 20297596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 6714485 - 6714439
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||| |||||||| ||||||||||| ||||||||||||    
T  6714485 taacccatttgggattggcctaatggttggcttgagatcttggagtt 6714439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 398
Target Start/End: Complemental strand, 19606038 - 19606004
Alignment:
Q  364 gggttggcctagtggttggcttgggatcttggagt 398  Q
    |||||| ||||||||||||||||||||||||||||    
T  19606038 gggttgccctagtggttggcttgggatcttggagt 19606004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 36390769 - 36390731
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatct 392  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  36390769 aacccatttggggttggcctagtggttggtttgggatct 36390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 41313985 - 41314031
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||| | |||||||||| ||||||||||||||||    
T  41313985 taacccatttggggttgccgtagtggttggtttgggatcttggagtt 41314031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 25293160 - 25293205
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||| |||||| |||||||||| |||||||||||||||||    
T  25293160 aacccatttgaggttggtctagtggttgacttgggatcttggagtt 25293205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 399
Target Start/End: Original strand, 27290598 - 27290627
Alignment:
Q  370 gcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||||||||||||||||||||    
T  27290598 gcctagtggttggcttgggatcttggagtt 27290627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 918897 - 918857
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||| |||||||||||||||||||| ||| ||||    
T  918897 atttggggttgacctagtggttggcttgggattttgaagtt 918857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 4852557 - 4852597
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    
T  4852557 atttggggttgacctagtggttgacttggaatcttggagtt 4852597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 41329842 - 41329882
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||| | |||||||||| |||||    
T  41329842 atttggggttggcctagtggttagtttgggatcttagagtt 41329882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 1254 - 1214
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1254 atttggggttggcctagtggttggcttgggatcttggagtt 1214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 10891 - 10851
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10891 atttggggttggcctagtggttggcttgggatcttggagtt 10851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 9497 - 9457
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9497 atttggggttggcctagtggttggcttgggatcttggagtt 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 12198 - 12158
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12198 atttggggttggcctagtggttggcttgggatcttggagtt 12158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 12958 - 12912
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  12958 taacctatttgggattggcctagtggttgacttgggatcttggagtt 12912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 41848 - 41802
Alignment:
Q  353 taacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  41848 taacccatttggggttggcctagtggttgacttgggatcttggagtt 41802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 14985 - 15030
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagtt 15030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 40319 - 40364
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||    
T  40319 aacccatttggggttggcctagtggttggcttaggatcttggagtt 40364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 97569 - 97524
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  97569 aacccatttggggttggcctagtggttggcttgggatcttgtagtt 97524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 399
Target Start/End: Complemental strand, 53069 - 53029
Alignment:
Q  359 atttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  53069 atttgggattggcctagtggttggcttgggatcttggagtt 53029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 26746 - 26701
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||    
T  26746 aacccatttggggttggcctactggttggcttaggatcttggagtt 26701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 66756 - 66801
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagtt 66801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 399
Target Start/End: Complemental strand, 150 - 116
Alignment:
Q  365 ggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||||||||||||||||||||| ||||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagtt 116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 8382 - 8337
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| ||||||||||||  |||||||||||| ||||||||||||||    
T  8382 aacccatttggggttggtttagtggttggctcgggatcttggagtt 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 393
Target Start/End: Original strand, 5052 - 5085
Alignment:
Q  360 tttggggttggcctagtggttggcttgggatctt 393  Q
    ||||||||||||||||| ||||||||||||||||    
T  5052 tttggggttggcctagtagttggcttgggatctt 5085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 394
Target Start/End: Complemental strand, 29342 - 29305
Alignment:
Q  357 ctatttggggttggcctagtggttggcttgggatcttg 394  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  29342 ctatttgggattggcctagtggttggcttggaatcttg 29305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 27770 - 27815
Alignment:
Q  354 aacctatttggggttggcctagtggttggcttgggatcttggagtt 399  Q
    |||| |||||||||||| ||||||||||| ||||||| ||||||||    
T  27770 aacccatttggggttggtctagtggttggtttgggattttggagtt 27815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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