View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2034_low_17 (Length: 233)
Name: NF2034_low_17
Description: NF2034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2034_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 32267649 - 32267852
Alignment:
| Q |
19 |
gtataagcatggctctcgcgtgacaatggtaagaagtatacatgacgggggagtgaggacgatccaaaacactcctgaaaattcagagttcaacattatt |
118 |
Q |
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| T |
32267649 |
gtataagcatggctctcgcgtgacaatggtaagaagtatacatgacgggggagtgaggacgatccaaaacactcctgaaaattcagagttcaacattatt |
32267748 |
T |
|
| Q |
119 |
tgttgcatgcacaatgataacaacgtgcatagcatgatcggtttgttagaggtttgtaacccaacacaaaaaagccctttatgcgtccatgtcattcatc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32267749 |
tgttgcatgcacaatgataacaacgtgcatagcatgatcggtttgttagaggtttgtaacccaacacaaaaaagccctttatgcgtccatgtcattcatc |
32267848 |
T |
|
| Q |
219 |
tcac |
222 |
Q |
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|||| |
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| T |
32267849 |
tcac |
32267852 |
T |
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