View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2034_low_7 (Length: 358)
Name: NF2034_low_7
Description: NF2034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2034_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27580377 - 27580340
Alignment:
| Q |
1 |
gtaataatttatttggagtctaaaaagatgttataaat |
38 |
Q |
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| T |
27580377 |
gtaataatttatttggagtctaaaaagatgttataaat |
27580340 |
T |
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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 27316778 - 27316743
Alignment:
| Q |
1 |
gtaataatttatttggagtctaaaaagatgttataa |
36 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
27316778 |
gtaataatttatttggagtctaaaaagatgttataa |
27316743 |
T |
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