View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20350_low_8 (Length: 237)
Name: NF20350_low_8
Description: NF20350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20350_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 16534396 - 16534608
Alignment:
| Q |
9 |
aaacacaatacaattggagaacaaaaatacatgatcaatataaaagccaacaatttaagcctatgatctatagaaaaattagaaagaagaaatggaaggg |
108 |
Q |
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| T |
16534396 |
aaacacaatacaattggagaacaaaaatacatgatgaatataaaagccaacaatttaagcctatgatctatagaaaaattagaaagaagaaatggaaggg |
16534495 |
T |
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| Q |
109 |
gttgcgaaattatatccttgacggagcagcaggttggtttcaaggaaagaaaaattcctcttgttaaatctaacggtctctacaactgctaaacaataca |
208 |
Q |
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| T |
16534496 |
gttgcgaaattatatccttgacggagcagcatgttagtttcaaggaaagaaaaattcctctttttaaatctaacggtctctacaactgctaaacaataca |
16534595 |
T |
|
| Q |
209 |
ttaaccatagatc |
221 |
Q |
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||||||||||||| |
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| T |
16534596 |
ttaaccatagatc |
16534608 |
T |
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