View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20353_high_9 (Length: 263)
Name: NF20353_high_9
Description: NF20353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20353_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 51755896 - 51755663
Alignment:
| Q |
18 |
gttactaggaacacgcgctggacaagcatcatcattacgaggttccaacacttccagacctaggtgaggtttatcggaggaagtgtcgtgggaaggaggt |
117 |
Q |
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| T |
51755896 |
gttactaggaacacgcgctggacaagcataatcatgacgaggttccaacacttccagacctaggtgaggtttatcggaggaagtgtcgtgggaaggaggt |
51755797 |
T |
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| Q |
118 |
aacaattcaggtttaggggttgggatcctccagaagattacggcgagccatgtccataaatggttgaagaaatcgaagctcaagtagttgaaagctagag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51755796 |
aacaattcaggtttaggggttgggatcctccagaagatgacggcgagccatgtccataaatggttgaagaaatcgaagctcaagtagttgaaagctagag |
51755697 |
T |
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| Q |
218 |
tgtcaagtggagaattttctgacatgttcatctc |
251 |
Q |
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|||||||||||||||||||| ||||||||||||| |
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| T |
51755696 |
tgtcaagtggagaattttctaacatgttcatctc |
51755663 |
T |
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