View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20354_high_17 (Length: 201)
Name: NF20354_high_17
Description: NF20354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20354_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 23034920 - 23034756
Alignment:
| Q |
19 |
ctaactcttccacaattgcgtacctaattcataatagaaaaataagaaataacaaggaattatcacaacannnnnnnaactaaaagactatattcattta |
118 |
Q |
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| T |
23034920 |
ctaactcttccacaattgcgtacctaattcataatagaaaaataagaaataacaaggaattatcacaacatttttttaactaaaagactatattcattta |
23034821 |
T |
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| Q |
119 |
tttggtatatatnnnnnnnnnnnnncacaaattcaatgttcttttagaggtagattcaacgtcgttaa |
186 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23034820 |
tttggtatatat---aaaaaaaaaacacaaattcaatgttcttttagaggtagattcaacgtcgttaa |
23034756 |
T |
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