View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20354_high_9 (Length: 286)
Name: NF20354_high_9
Description: NF20354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20354_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 36963976 - 36963858
Alignment:
| Q |
16 |
agtatttgtatagatacctgagtgaaattgttggttctgtacaagaaagcacgaatgacagaagcatatgcttctttctcagctgtatgaatgaaagaaa |
115 |
Q |
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| T |
36963976 |
agtatttgtatagatacctgagtgaaattgttggttctgtacaagaaagcacgaatgacagaagcatatgcttctttctcagctgtatgaatga----aa |
36963881 |
T |
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| Q |
116 |
gagtcaagctgacttataacaat |
138 |
Q |
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| T |
36963880 |
gagtcaagctgacttataacaat |
36963858 |
T |
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