View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20354_low_3 (Length: 451)

Name: NF20354_low_3
Description: NF20354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20354_low_3
NF20354_low_3
[»] chr6 (22 HSPs)
chr6 (48-191)||(17302581-17302724)
chr6 (48-153)||(16766721-16766826)
chr6 (48-153)||(8365449-8365554)
chr6 (48-153)||(9107300-9107405)
chr6 (48-153)||(31384944-31385048)
chr6 (90-153)||(4040532-4040595)
chr6 (95-153)||(8776909-8776967)
chr6 (50-152)||(12696350-12696446)
chr6 (48-134)||(9522915-9523001)
chr6 (48-153)||(9629407-9629512)
chr6 (108-153)||(7625189-7625234)
chr6 (48-89)||(10770668-10770709)
chr6 (48-153)||(18367860-18367965)
chr6 (48-88)||(9911523-9911563)
chr6 (48-153)||(34595158-34595252)
chr6 (94-155)||(9658938-9659000)
chr6 (50-87)||(785451-785488)
chr6 (48-153)||(8714004-8714109)
chr6 (50-87)||(19369843-19369880)
chr6 (50-99)||(21395292-21395341)
chr6 (108-153)||(31959223-31959268)
chr6 (120-153)||(34446656-34446689)
[»] chr5 (15 HSPs)
chr5 (48-153)||(39698565-39698670)
chr5 (50-153)||(21542056-21542159)
chr5 (50-153)||(21522776-21522879)
chr5 (50-153)||(21533342-21533445)
chr5 (48-153)||(30098350-30098455)
chr5 (48-153)||(6401522-6401627)
chr5 (48-153)||(7677729-7677834)
chr5 (63-115)||(30183588-30183640)
chr5 (48-87)||(31084347-31084386)
chr5 (83-153)||(16304367-16304437)
chr5 (48-152)||(21190998-21191091)
chr5 (50-83)||(8420053-8420086)
chr5 (50-151)||(18592099-18592200)
chr5 (48-84)||(10298593-10298629)
chr5 (48-152)||(19579725-19579829)
[»] chr7 (28 HSPs)
chr7 (48-153)||(24339666-24339771)
chr7 (48-152)||(26033392-26033496)
chr7 (48-153)||(9778524-9778623)
chr7 (48-153)||(2334274-2334378)
chr7 (48-153)||(7438730-7438835)
chr7 (48-152)||(9408265-9408369)
chr7 (48-153)||(5409772-5409871)
chr7 (48-153)||(11665370-11665475)
chr7 (52-153)||(21930656-21930757)
chr7 (50-149)||(13770717-13770810)
chr7 (54-153)||(25822685-25822784)
chr7 (48-153)||(43027405-43027504)
chr7 (48-153)||(32308144-32308249)
chr7 (101-153)||(17852066-17852118)
chr7 (48-87)||(18039023-18039062)
chr7 (83-153)||(598256-598326)
chr7 (77-151)||(2533761-2533834)
chr7 (53-142)||(7058455-7058542)
chr7 (50-88)||(12843170-12843208)
chr7 (50-88)||(27945067-27945105)
chr7 (50-83)||(5937421-5937454)
chr7 (108-153)||(6490789-6490834)
chr7 (108-153)||(32287404-32287449)
chr7 (50-86)||(1885599-1885635)
chr7 (50-90)||(6028651-6028691)
chr7 (48-84)||(21560527-21560563)
chr7 (96-152)||(22868108-22868164)
chr7 (48-84)||(35861988-35862024)
[»] chr4 (21 HSPs)
chr4 (48-154)||(30982807-30982913)
chr4 (48-153)||(19482692-19482797)
chr4 (48-153)||(24613631-24613736)
chr4 (51-153)||(3947702-3947798)
chr4 (48-87)||(28084546-28084585)
chr4 (50-155)||(847977-848082)
chr4 (48-153)||(5414102-5414207)
chr4 (50-153)||(51701284-51701384)
chr4 (111-153)||(34200218-34200260)
chr4 (48-153)||(22234820-22234925)
chr4 (52-149)||(30838238-30838335)
chr4 (104-153)||(53381531-53381580)
chr4 (48-87)||(12895112-12895151)
chr4 (48-83)||(28964248-28964283)
chr4 (95-153)||(23292927-23292985)
chr4 (48-150)||(27706110-27706212)
chr4 (95-153)||(35161096-35161154)
chr4 (95-137)||(40481701-40481743)
chr4 (48-104)||(4383391-4383447)
chr4 (48-88)||(11596347-11596387)
chr4 (50-90)||(22799886-22799926)
[»] scaffold0086 (1 HSPs)
scaffold0086 (48-153)||(2952-3057)
[»] chr1 (25 HSPs)
chr1 (48-153)||(31694640-31694745)
chr1 (48-153)||(9828068-9828173)
chr1 (48-153)||(47989521-47989626)
chr1 (48-153)||(6427488-6427593)
chr1 (48-153)||(18556386-18556491)
chr1 (48-153)||(5944307-5944412)
chr1 (48-153)||(32461394-32461498)
chr1 (61-153)||(40917786-40917878)
chr1 (48-153)||(51410049-51410143)
chr1 (95-153)||(22515828-22515886)
chr1 (101-162)||(15323234-15323295)
chr1 (96-153)||(18471356-18471413)
chr1 (50-142)||(6612112-6612204)
chr1 (53-153)||(21032235-21032335)
chr1 (105-153)||(21365993-21366041)
chr1 (48-87)||(24577182-24577221)
chr1 (48-153)||(25361910-25362011)
chr1 (50-113)||(30173732-30173795)
chr1 (48-83)||(38078661-38078696)
chr1 (103-153)||(1704936-1704986)
chr1 (92-141)||(18190061-18190110)
chr1 (48-81)||(32434718-32434751)
chr1 (48-88)||(1704987-1705027)
chr1 (48-84)||(15449231-15449267)
chr1 (48-84)||(28663632-28663668)
[»] chr8 (22 HSPs)
chr8 (48-153)||(22652000-22652105)
chr8 (48-153)||(29510234-29510339)
chr8 (48-153)||(15816059-15816164)
chr8 (48-153)||(29447040-29447145)
chr8 (48-153)||(11927016-11927121)
chr8 (48-153)||(28745522-28745627)
chr8 (54-153)||(4673355-4673454)
chr8 (100-150)||(4498368-4498418)
chr8 (48-117)||(2572022-2572091)
chr8 (48-153)||(8343340-8343445)
chr8 (48-153)||(11944689-11944794)
chr8 (108-153)||(13403179-13403224)
chr8 (52-153)||(21465440-21465541)
chr8 (54-123)||(29655938-29656007)
chr8 (50-130)||(1926013-1926093)
chr8 (81-153)||(6065587-6065659)
chr8 (83-153)||(3951477-3951547)
chr8 (52-150)||(4122182-4122280)
chr8 (48-149)||(22197676-22197777)
chr8 (48-86)||(25566865-25566903)
chr8 (108-153)||(13397624-13397669)
chr8 (120-153)||(34127173-34127206)
[»] chr3 (19 HSPs)
chr3 (48-153)||(14209137-14209242)
chr3 (48-153)||(49651717-49651821)
chr3 (52-159)||(15796218-15796325)
chr3 (52-153)||(14216920-14217021)
chr3 (52-153)||(14223049-14223150)
chr3 (48-117)||(14832123-14832192)
chr3 (48-153)||(41961580-41961685)
chr3 (48-153)||(34185053-34185158)
chr3 (48-152)||(4987222-4987326)
chr3 (48-153)||(55212987-55213091)
chr3 (48-158)||(28918025-28918126)
chr3 (95-153)||(55401135-55401193)
chr3 (48-111)||(750590-750653)
chr3 (83-153)||(11252024-11252094)
chr3 (96-154)||(15999950-16000008)
chr3 (104-153)||(303184-303233)
chr3 (50-99)||(4990951-4991000)
chr3 (48-153)||(28812539-28812644)
chr3 (101-153)||(17276793-17276845)
[»] scaffold0136 (1 HSPs)
scaffold0136 (48-153)||(3779-3884)
[»] scaffold0019 (1 HSPs)
scaffold0019 (48-153)||(71749-71854)
[»] chr2 (17 HSPs)
chr2 (52-153)||(35056896-35056997)
chr2 (61-153)||(26769548-26769640)
chr2 (48-153)||(30717460-30717565)
chr2 (48-153)||(37419767-37419872)
chr2 (50-153)||(12668353-12668456)
chr2 (83-153)||(18840954-18841024)
chr2 (101-153)||(37559043-37559095)
chr2 (48-83)||(5040758-5040793)
chr2 (50-153)||(11223794-11223896)
chr2 (48-87)||(33153448-33153487)
chr2 (48-83)||(37559001-37559036)
chr2 (108-153)||(11307935-11307978)
chr2 (111-153)||(34006931-34006973)
chr2 (95-153)||(38117100-38117158)
chr2 (51-153)||(44860347-44860449)
chr2 (120-153)||(18622687-18622720)
chr2 (48-152)||(15657888-15657992)
[»] scaffold0008 (1 HSPs)
scaffold0008 (49-152)||(263303-263406)
[»] scaffold0044 (1 HSPs)
scaffold0044 (48-147)||(53204-53303)
[»] scaffold0450 (1 HSPs)
scaffold0450 (48-153)||(8565-8670)
[»] scaffold0003 (1 HSPs)
scaffold0003 (48-153)||(241618-241723)
[»] scaffold0022 (1 HSPs)
scaffold0022 (92-153)||(90900-90961)
[»] scaffold0223 (1 HSPs)
scaffold0223 (48-87)||(20196-20235)
[»] scaffold0652 (1 HSPs)
scaffold0652 (95-153)||(403-461)
[»] scaffold0361 (1 HSPs)
scaffold0361 (95-153)||(14587-14645)
[»] scaffold0246 (1 HSPs)
scaffold0246 (95-137)||(19640-19682)
[»] scaffold0025 (1 HSPs)
scaffold0025 (48-86)||(23794-23832)
[»] scaffold0154 (1 HSPs)
scaffold0154 (64-153)||(13453-13542)
[»] scaffold0306 (1 HSPs)
scaffold0306 (120-152)||(13491-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (120-152)||(21804-21836)
[»] scaffold0036 (1 HSPs)
scaffold0036 (48-152)||(9678-9782)


Alignment Details
Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 48 - 191
Target Start/End: Original strand, 17302581 - 17302724
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| ||||||| || ||||||| |||||||| || ||||||||     
T  17302581 tcacataattcaatgtaattacaagtgtcattgtcgtgtcagtattagacacaacacgtgtccgacatcggaacacacctaatccaaagaatgtccgtgt 17302680  T
Q  148 ttcatatctactatttaattgtttgtttcttcttctgttgtttt 191  Q
    |||||| ||| || ||||||||||||||||||||||||||||||    
T  17302681 ttcatagctattaattaattgtttgtttcttcttctgttgtttt 17302724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 16766721 - 16766826
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||| || || |||||||||||| ||||||||||  |||| | |||||| | || |||||||||    
T  16766721 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgc 16766820  T
Q  148 ttcata 153  Q
    ||||||    
T  16766821 ttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 8365554 - 8365449
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||  |||||||||||||||| |||||||||| ||||| ||||| |||||| |||||||| |  |||| | |||||| |||||| |||||||    
T  8365554 tcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgc 8365455  T
Q  148 ttcata 153  Q
    ||||||    
T  8365454 ttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 9107405 - 9107300
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| |||||| |||||||||||||||| |||||||||| || || ||||||||  || ||||||||||  |||||| |||||| ||||||| ||||||    
T  9107405 tcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgc 9107306  T
Q  148 ttcata 153  Q
    ||||||    
T  9107305 ttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 31384944 - 31385048
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| ||||||||| ||| |  ||||| |||||| ||| ||||||  |||| | |||||||||||||||||||||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcgtgt-agtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgc 31385042  T
Q  148 ttcata 153  Q
    ||||||    
T  31385043 ttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 4040532 - 4040595
Alignment:
Q  90 tatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||||| |||||||||| |||||||||||||||||||| ||| ||||||| || ||||||    
T  4040532 tatcagacacgacacgtatccaacaccgaaacacacttaatctaagaagtgtccatgtttcata 4040595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 8776967 - 8776909
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| |||||| ||||||||||| |||||| |||||| ||||||||||||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 12696350 - 12696446
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| |||||||||||||||| ||||||||      || ||||| |||||| || |||||||  |||||| | |||||||||||||| ||||||    
T  12696350 acataattcagtgtaattacaagtgtcagtgtcgtg------tcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgctt 12696443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 9522915 - 9523001
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaa 134  Q
    |||||||||||| |||||||||||||||| |||| ||||| || || ||  | |||||| ||||||||||| |||| | ||||||||    
T  9522915 tcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 9629407 - 9629512
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtc-gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtg 146  Q
    ||||||||||||||||||||| | ||||| ||||| ||||| || || ||||||||| || |||||||| || ||||   |||||| |||||||||| ||    
T  9629407 tcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatg 9629505  T
Q  147 cttcata 153  Q
    |||||||    
T  9629506 cttcata 9629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 7625189 - 7625234
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||||    
T  7625189 tccgacaccggaacacgcttaatccaaggagtgttcgtgcttcata 7625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 10770709 - 10770668
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcag 89  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  10770709 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcag 10770668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 18367860 - 18367965
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| ||| || |||||||| | ||||| |||||||||| || |||||||| |||| | || ||||| |  |||| | | |||||||||||||||||||    
T  18367860 tcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgc 18367959  T
Q  148 ttcata 153  Q
    ||||||    
T  18367960 ttcata 18367965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 9911563 - 9911523
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtca 88  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  9911563 tcacataattcagtgtaattacaagtgtcggtgtcgtgtca 9911523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 34595158 - 34595252
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| ||||||           ||||| |||||| || |||||||  |||||| |||||| ||||||||||||||    
T  34595158 tcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgc 34595246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 9658938 - 9659000
Alignment:
Q  94 agacacaacacgtatccgacaccgaaacacacttaat-ccaaggagtgtccgtgcttcatatc 155  Q
    |||||| |||||| || ||||||| ||||| | |||| |||||||||||||||||||||||||    
T  9658938 agacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcatatc 9659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 785488 - 785451
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  785488 acataattcaatgtaatcacaagtgtcggtgtcgtgtc 785451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 8714004 - 8714109
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| ||||||||||| |||  |||||||||| || || ||||| |||| | ||||||| ||  |||| |  ||||| |||||||||  |||    
T  8714004 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgc 8714103  T
Q  148 ttcata 153  Q
    ||||||    
T  8714104 ttcata 8714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 19369843 - 19369880
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  19369843 acataattcaatgtaatcacaagtgtcggtgtcgtgtc 19369880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 21395341 - 21395292
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacac 99  Q
    |||||||| | |||||||||||||||| ||||||||||||| || |||||    
T  21395341 acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 31959223 - 31959268
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||  |||||| |||||| ||||||||||||||||||||    
T  31959223 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 34446656 - 34446689
Alignment:
Q  120 acacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| |||||||||||||||||||||||||||    
T  34446656 acacacctaatccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 39698565 - 39698670
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||| || || ||||| ||| |||||||||||||| |||| | |||||| ||||||||||||||    
T  39698565 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgc 39698664  T
Q  148 ttcata 153  Q
    ||||||    
T  39698665 ttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 21542056 - 21542159
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| |||||||||||||||| |||||||||| || || ||||| |||||| ||||||||||  |||| |  |||||||||| ||||||||| |    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcat 21542155  T
Q  150 cata 153  Q
    ||||    
T  21542156 cata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 21522776 - 21522879
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| ||||||||||| |||| |||||||||| || || ||||| |||||| |||| |||||  |||| | |||||||| |||||||||||| |    
T  21522776 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21522875  T
Q  150 cata 153  Q
    ||||    
T  21522876 cata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 21533342 - 21533445
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| ||||||||||| |||| |||||||||| || || ||||| |||||| |||| |||||  |||| | |||||||| |||||||||||| |    
T  21533342 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21533441  T
Q  150 cata 153  Q
    ||||    
T  21533442 cata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 30098350 - 30098455
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||||||||||||||||||| |  |||| || ||| |||||| || ||||| |||||| || ||||||   |||||| |||||| |||| |||||||||    
T  30098350 tcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgc 30098449  T
Q  148 ttcata 153  Q
    ||||||    
T  30098450 ttcata 30098455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 6401522 - 6401627
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| ||| || |||||||| | ||||| ||||||||||||| || ||||| |||||| || ||||| |  | || | | |||||||||||||||||||    
T  6401522 tcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgc 6401621  T
Q  148 ttcata 153  Q
    ||||||    
T  6401622 ttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 7677729 - 7677834
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| || ||||| ||||||| |||||||||| || || |||||  ||| | ||||||||||  |||| | |||||| ||||| ||| ||||    
T  7677729 tcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgc 7677828  T
Q  148 ttcata 153  Q
    ||||||    
T  7677829 ttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 30183588 - 30183640
Alignment:
Q  63 taattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacac 115  Q
    |||||||||||||| |||||||||  ||||||||||| |||||| ||||||||    
T  30183588 taattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacac 30183640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 31084347 - 31084386
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  31084347 tcacataattcaatgtaattacaagtgtcgatgtcgtgtc 31084386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 16304437 - 16304367
Alignment:
Q  83 gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||| ||||| ||||||  |||||||||| ||||   |||||| |||| |||||||||||||||    
T  16304437 gtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcata 16304367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 21191091 - 21190998
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| ||||||           |||||||||||| |||||| |||  |||| | |||||| ||||||||||||||    
T  21191091 tcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgc 21191003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 8420053 - 8420086
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcg 83  Q
    ||||||||||||||||||||||||||| ||||||    
T  8420053 acataattcaatgtaattacaagtgtcggtgtcg 8420086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 18592099 - 18592200
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    ||||||||||||||||||| | ||| | |||||||||| || || |||||||||||| || |||| ||  ||||   |||| | | ||||||||||||||    
T  18592099 acataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgctt 18592198  T
Q  150 ca 151  Q
    ||    
T  18592199 ca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 10298593 - 10298629
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgt 84  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  10298593 tcacataatacaatgtaattacaagtgtcggtgtcgt 10298629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 19579725 - 19579829
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | || ||||||||||||| ||||||||||||| || ||||| |||  | ||  ||||||  |||| | |||||| |||||||| ||||     
T  19579725 tcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgt 19579824  T
Q  148 ttcat 152  Q
    |||||    
T  19579825 ttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 24339666 - 24339771
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||| || || ||||| |||||||||||||||||  |||| | |||||| ||||||| ||||||    
T  24339666 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgc 24339765  T
Q  148 ttcata 153  Q
    ||||||    
T  24339766 ttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 26033496 - 26033392
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| || ||||||| || |||||||  |||||| ||||| ||||  |||||| |||||| |||||||||||||     
T  26033496 tcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgt 26033397  T
Q  148 ttcat 152  Q
    |||||    
T  26033396 ttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 9778524 - 9778623
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| | |||||||||||||| |||||||||| |      ||||||||||| ||||||||||  |||| | |||||||||||||||||||||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtcgtgtcgg------acacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc 9778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 2334274 - 2334378
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | |||||||||||||||| |||||||||| || || ||||| |||| | |||||||| |||||||   |||||| |||||||||||||     
T  2334274 tcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgt 2334372  T
Q  148 ttcata 153  Q
    ||||||    
T  2334373 ttcata 2334378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 7438730 - 7438835
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||||||||||||||||||||||||||| ||||| |||| || ||| |||| |||| | | ||||||    |||| | |||| ||||||||||||||||    
T  7438730 tcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgc 7438829  T
Q  148 ttcata 153  Q
    ||||||    
T  7438830 ttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 9408369 - 9408265
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | |||||||||||||||| ||||||| || || |||||||| | |  ||||||||||| |||||| | |||||| | || |||||||||    
T  9408369 tcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacgatatatatccgacaccaaaacacgcctaatccgaagaatgtccgtgc 9408270  T
Q  148 ttcat 152  Q
    |||||    
T  9408269 ttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 5409871 - 5409772
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| || ||||||||||||| |||||||||| |      |||| |||||| ||||||||||  |||| | |||||| ||||||||||||||    
T  5409871 tcacataattcagtgcaattacaagtgtcggtgtcgtgtcgg------acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 5409778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 11665475 - 11665370
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| | |||||| |||||||  |||| |||| || ||  |||| |||||| |||||||||||||||||  |||| | |||| |||||||||    
T  11665475 tcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgc 11665376  T
Q  148 ttcata 153  Q
    ||||||    
T  11665375 ttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 21930656 - 21930757
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    |||||||| | ||||||||||||||  |||||||||||| |  ||||||| |||| |||||| ||| ||||||| |||||| | ||| |||| |||||||    
T  21930656 ataattcattttaattacaagtgtcgatgtcgtgtcagtgttggacacaagacgtgtccgacgccggaacacacctaatccgaagagagtccatgcttca 21930755  T
Q  152 ta 153  Q
    ||    
T  21930756 ta 21930757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 13770717 - 13770810
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| ||||||||||||||||  ||||||||| |      ||||||||||| |||||||||| ||||| | |||||| | ||||||||||||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcgtgtcgg------acacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 25822685 - 25822784
Alignment:
Q  54 aattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| |||||||||||||||| ||||||| || ||||| ||||| |||||| || |||| ||  |||  | ||||| |||||||||||||| ||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 43027504 - 43027405
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||||||| || ||||| |||||||||| ||||||||||||      |||| |||||| ||||||||||  |||| | |||||| | ||||||||||||    
T  43027504 tcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcag------acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgc 43027411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 32308144 - 32308249
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||  | ||||| |||||||||| || |  ||||| |||| | ||||||||||| |||||  |||||| |||||||| | |||    
T  32308144 tcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgc 32308243  T
Q  148 ttcata 153  Q
    ||||||    
T  32308244 ttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 17852066 - 17852118
Alignment:
Q  101 acacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| ||||||||||| |||||| |||| | ||||||||||||||||||||    
T  17852066 acacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 18039023 - 18039062
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  18039023 tcacataattcagtgtaattacaagtgtcggtgtcgtgtc 18039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 598256 - 598326
Alignment:
Q  83 gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| || |||||||| |||||| ||||||||||  |||| | |||||| || |||||||||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 2533834 - 2533761
Alignment:
Q  77 tgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    ||||||||||| || | |||||||||||||||||||| |||  |||| | |||||| |||||||| |||||||||    
T  2533834 tgtgtcgtgtc-gtgtaagacacaacacgtatccgacgccgggacacgcgtaatccgaggagtgttcgtgcttca 2533761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 7058455 - 7058542
Alignment:
Q  53 taattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtc 142  Q
    ||||||| |||||||||||||||  ||||||||||   ||| |||||||||| | |||||||  || |||| | ||||||||||||||||    
T  7058455 taattcagtgtaattacaagtgttggtgtcgtgtc--gatcggacacaacacatgtccgacattgacacacgcctaatccaaggagtgtc 7058542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 12843208 - 12843170
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtca 88  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  12843208 acataattcaatgtaattacatgtgtcagtgtcgtgtca 12843170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 27945067 - 27945105
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtca 88  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  27945067 acataattcagtgtaattacaagtgtcggtgtcgtgtca 27945105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 5937454 - 5937421
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcg 83  Q
    ||||||||||||||||| ||||||||||||||||    
T  5937454 acataattcaatgtaatcacaagtgtctgtgtcg 5937421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 6490789 - 6490834
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||  |||| |||||||| ||||||||||||||||||||    
T  6490789 tccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 32287449 - 32287404
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||  |||||| |||||| ||||||||||||||||||||    
T  32287449 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 1885599 - 1885635
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgt 86  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  1885599 acataattcaatgtaatcacaagtgtcggtgtcgtgt 1885635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 6028651 - 6028691
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagt 90  Q
    |||||||| ||||||||||||| |||| |||||||||||||    
T  6028651 acataatttaatgtaattacaaatgtcggtgtcgtgtcagt 6028691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 21560527 - 21560563
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgt 84  Q
    |||||||||||| |||||||||||||||| |||||||    
T  21560527 tcacataattcagtgtaattacaagtgtcggtgtcgt 21560563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 22868108 - 22868164
Alignment:
Q  96 acacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcat 152  Q
    ||||||||||| || |||||||  |||||| |||||| |||||||||| ||||||||    
T  22868108 acacaacacgtgtcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 35861988 - 35862024
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgt 84  Q
    ||||||||||||||||||||  |||||||||||||||    
T  35861988 tcacataattcaatgtaattgtaagtgtctgtgtcgt 35862024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 30982913 - 30982807
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||||| |||| |||||||| ||||||| |||||||||| || |||||||| |||||| ||||||||||  |||| | |||||||| ||||||||||||    
T  30982913 tcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgc 30982814  T
Q  148 ttcatat 154  Q
    |||||||    
T  30982813 ttcatat 30982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 19482692 - 19482797
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||  |||||||||||||||  |||||||||| ||||  ||||| |||||| |||||||| |  |||||| |||||| |||||||| |||||    
T  19482692 tcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgc 19482791  T
Q  148 ttcata 153  Q
    ||||||    
T  19482792 ttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 24613736 - 24613631
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||||||||| |||||||||| ||||| |||| || |||||||| |||||| || ||||||   ||||   |||||| ||||||||||||||    
T  24613736 tcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgc 24613637  T
Q  148 ttcata 153  Q
    ||||||    
T  24613636 ttcata 24613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 3947798 - 3947702
Alignment:
Q  51 cataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttc 150  Q
    ||||||||| |||||||||||||||| |||||||||| |      |||| |||||| |||||||||   |||||| |||||| |||||||||||||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcgtgtcgg------acacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttc 3947705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 28084546 - 28084585
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28084546 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 28084585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 847977 - 848082
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| | |||||||||||||| ||||| |||  || || ||||| | |||| ||  ||||||  |||||| |||||||||||||||||||| ||    
T  847977 acataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgttt 848076  T
Q  150 catatc 155  Q
    ||||||    
T  848077 catatc 848082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 5414207 - 5414102
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| ||| || |||||||| | || || ||||||||||||| || ||||| |||||| || ||||| |  |||||| | |||||||||||||||||||    
T  5414207 tcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgc 5414108  T
Q  148 ttcata 153  Q
    ||||||    
T  5414107 ttcata 5414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 51701284 - 51701384
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||| | |||||||||||||||  |||||||||| || ||  |||| ||||||||||   | |||||||| |||||||| ||||| ||||||||||    
T  51701284 acataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacgacacgtatcc---atcgaaacacgcttaatccgaggagcgtccgtgctt 51701380  T
Q  150 cata 153  Q
    ||||    
T  51701381 cata 51701384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 34200260 - 34200218
Alignment:
Q  111 gacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  34200260 gacaccgaaacacacttaatccaaggagtgtctatgcttcata 34200218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 22234925 - 22234820
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||  | ||||| |||||||||| || || ||||| |||||| |||||||||   |||||  |||||| || ||||| |||||    
T  22234925 tcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgc 22234826  T
Q  148 ttcata 153  Q
    ||||||    
T  22234825 ttcata 22234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 30838238 - 30838335
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||| | |||||||| |||| || ||||||||||||| || ||| | |||||| ||||||||| | |||| | ||| || ||||||||||||||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 53381580 - 53381531
Alignment:
Q  104 cgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||||||  |||||| |||||| ||||||||||||||||||||    
T  53381580 cgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 12895151 - 12895112
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  12895151 tcacataattcaaagtaattacaagtgtcggtgtcgtgtc 12895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 28964283 - 28964248
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcg 83  Q
    |||||||||||| |||||||||||||||||||||||    
T  28964283 tcacataattcagtgtaattacaagtgtctgtgtcg 28964248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 23292985 - 23292927
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| |||||| ||||||||||  |||| | |||||| ||||||||||||||||||||    
T  23292985 gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 27706212 - 27706110
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | |||||||||||||||  ||||||||| | | || ||||| |||||||||||| ||||  |||| | |||||  |||| ||| |||||    
T  27706212 tcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcctaatctgaggaatgtacgtgc 27706113  T
Q  148 ttc 150  Q
    |||    
T  27706112 ttc 27706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 35161096 - 35161154
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| |||||| |||||||||| ||||||| |||||| |  |||||||||||||||||    
T  35161096 gacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcata 35161154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 40481701 - 40481743
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaagga 137  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||    
T  40481701 gacacgacacgtgtccgacaccgaaacacacttaatccgagga 40481743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 4383391 - 4383447
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacac 104  Q
    |||||||||||| ||||||||||| |||| |||||||||| || ||| |||| ||||    
T  4383391 tcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 11596387 - 11596347
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtca 88  Q
    |||||||||||| |||||||||||||||  |||||||||||    
T  11596387 tcacataattcagtgtaattacaagtgtaggtgtcgtgtca 11596347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 22799926 - 22799886
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagt 90  Q
    ||||||||||||||||| ||| ||||| |||||||||||||    
T  22799926 acataattcaatgtaatcacacgtgtcagtgtcgtgtcagt 22799886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 2952 - 3057
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | ||||||||||||| || |||||||||| ||||||||||| |||||| | |||||||| ||||| | |||||| ||||||||||||||    
T  2952 tcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgc 3051  T
Q  148 ttcata 153  Q
    | ||||    
T  3052 tccata 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 8e-22; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 31694745 - 31694640
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| | |||||||||||||| |||||||||| || || |||||||||| ||| |||||||| ||||| | |||||  ||||||||||||||    
T  31694745 tcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgc 31694646  T
Q  148 ttcata 153  Q
    ||||||    
T  31694645 ttcata 31694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 9828068 - 9828173
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||  | ||||| |||||||||| || |||||||| |||||| ||||||||||  ||||   |||||| ||||||||||||||    
T  9828068 tcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 9828167  T
Q  148 ttcata 153  Q
    ||||||    
T  9828168 ttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 47989521 - 47989626
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||| || || ||||| |||| | || |||| ||  |||| | |||||| ||||||||||||||    
T  47989521 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgc 47989620  T
Q  148 ttcata 153  Q
    ||||||    
T  47989621 ttcata 47989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 6427488 - 6427593
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||||||||| |||||||||| |||||||||  |  || ||||| |||||| ||||||||||  |||| | |||||  | ||||||||||||    
T  6427488 tcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgc 6427587  T
Q  148 ttcata 153  Q
    ||||||    
T  6427588 ttcata 6427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 18556491 - 18556386
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| ||||||||||||||| |  |||||||| | || |||||| | ||||||||||||||| |  |||| | |||||| || |||||||||||    
T  18556491 tcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgc 18556392  T
Q  148 ttcata 153  Q
    ||||||    
T  18556391 ttcata 18556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 5944307 - 5944412
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||| ||||||| ||||||||||  |  | |||||||||| | ||||||||||  | || | |||||| |||||||| |||||    
T  5944307 tcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgc 5944406  T
Q  148 ttcata 153  Q
    ||||||    
T  5944407 ttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 32461498 - 32461394
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| |||||||||||||||||  |||| ||||| || || ||||| |||||| || ||||| |  |||| | ||||||||| |||||||||||    
T  32461498 tcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgc 32461400  T
Q  148 ttcata 153  Q
    ||||||    
T  32461399 ttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 40917786 - 40917878
Alignment:
Q  61 tgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||||| || |||||||||| || |  ||||| |||||| ||||||||||  |||| | |||||| |||| |||||||||||||||    
T  40917786 tgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 51410049 - 51410143
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| ||||||           ||||| |||||||||||||||||| |||| | ||||||||||||| | |||||    
T  51410049 tcacataattcagtgtaattacaagtgtcggtgtcg-----------gacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgc 51410137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 22515886 - 22515828
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| |||| ||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  22515886 gacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 15323234 - 15323295
Alignment:
Q  101 acacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcatatctactatt 162  Q
    |||||| |||||||||||||||||| |||||| ||||||||| ||| |||||| ||| ||||    
T  15323234 acacgtgtccgacaccgaaacacacctaatccgaggagtgtcagtgtttcatagctagtatt 15323295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 18471356 - 18471413
Alignment:
Q  96 acacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||| |||||| |||||||||||||||||| |||| | |||||||||||| |||||||    
T  18471356 acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcata 18471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 6612204 - 6612112
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtc 142  Q
    |||||||||| |||||||||||||||| ||||||||||  | || ||||| | | || |||||||||   |||| | ||||||||||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 153
Target Start/End: Original strand, 21032235 - 21032335
Alignment:
Q  53 taattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcat 152  Q
    ||||| ||| ||||||||| |||| |||||||||  || || ||||| ||| || ||||||| ||| | || | |||||||||||||||| |||||||||    
T  21032235 taattaaatataattacaaatgtcggtgtcgtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcat 21032334  T
Q  153 a 153  Q
    |    
T  21032335 a 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 21366041 - 21365993
Alignment:
Q  105 gtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  21366041 gtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 21365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 24577221 - 24577182
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  24577221 tcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 25361910 - 25362011
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||| | ||||| |||||||||| || || ||||| |||  | |||||||||| |  |||| |||||| | ||||||||||||    
T  25361910 tcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca--tgtccgacaccgga--acacctaatccgaagagtgtccgtgc 25362005  T
Q  148 ttcata 153  Q
    ||||||    
T  25362006 ttcata 25362011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 30173795 - 30173732
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgac 113  Q
    |||||| ||| |||||||||||||||| |||||||||| ||||| ||||| |||| | ||||||    
T  30173795 acataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgac 30173732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 38078696 - 38078661
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcg 83  Q
    ||||||||||||||||||||||||||||| ||||||    
T  38078696 tcacataattcaatgtaattacaagtgtcggtgtcg 38078661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 1704986 - 1704936
Alignment:
Q  103 acgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||| ||||||||||| |||| | ||||||||||||||||| |||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 18190110 - 18190061
Alignment:
Q  92 tcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgt 141  Q
    ||||||||||||||| ||||||||||  |||||| |||||| ||||||||    
T  18190110 tcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 32434751 - 32434718
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgt 81  Q
    |||||||||||| |||||||||||||||||||||    
T  32434751 tcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 1705027 - 1704987
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtca 88  Q
    ||||||||||||  ||||||||||||||| |||||||||||    
T  1705027 tcacataattcagggtaattacaagtgtcggtgtcgtgtca 1704987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 15449267 - 15449231
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgt 84  Q
    |||||||||| | ||||||||||||||||||||||||    
T  15449267 tcacataatttagtgtaattacaagtgtctgtgtcgt 15449231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 28663632 - 28663668
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgt 84  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  28663632 tcacataattctatgtaattacaagtgtcggtgtcgt 28663668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 22652000 - 22652105
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||||| |||||||||||||| |||||||||| || || ||||| ||| || ||||||||||  ||||   |||||| ||||||||||||||    
T  22652000 tcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 22652099  T
Q  148 ttcata 153  Q
    ||||||    
T  22652100 ttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 29510339 - 29510234
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| |||||| | |||||||||||||| |||| ||||| || || ||||| || ||| ||||||||||  |||||| |||||| ||||||||||||||    
T  29510339 tcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 29510240  T
Q  148 ttcata 153  Q
    ||||||    
T  29510239 ttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 15816164 - 15816059
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | |||||||| ||||||| |||||||||  || || ||||| ||||| |||||||||||  |||| | |||||| || |||||||||||    
T  15816164 tcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgc 15816065  T
Q  148 ttcata 153  Q
    ||||||    
T  15816064 ttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 29447145 - 29447040
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||||||||| |||||||||| ||||| |||| || || ||||| ||| || || ||||||   |||| | |||||| ||||||||||||||    
T  29447145 tcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgc 29447046  T
Q  148 ttcata 153  Q
    ||||||    
T  29447045 ttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 11927121 - 11927016
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||| | ||||| |||||||||  || ||| |||| ||| |||||| ||| ||| |||| | |||||| | ||||||||||||    
T  11927121 tcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatccgatgagtgtccgtgc 11927022  T
Q  148 ttcata 153  Q
    ||||||    
T  11927021 ttcata 11927016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 28745522 - 28745627
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||||||||| ||||| ||||  ||||||||| || || ||||| |||| | |||| |||||| |||    |||| ||||||||||||||||    
T  28745522 tcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgc 28745621  T
Q  148 ttcata 153  Q
    ||||||    
T  28745622 ttcata 28745627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 4673454 - 4673355
Alignment:
Q  54 aattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| ||||||||||||| || ||||| |||   | || ||||| || | |||||||||||| ||||| | |||||||||||||||| ||||||||||    
T  4673454 aattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 4498368 - 4498418
Alignment:
Q  100 aacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttc 150  Q
    |||| ||||||||||||||||||||| |||||  |||||||||||||||||    
T  4498368 aacatgtatccgacaccgaaacacacctaatcagaggagtgtccgtgcttc 4498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 2572091 - 2572022
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccg 117  Q
    |||||||||| | |||||||||||||||| |||||||||| || || ||||| |||||| ||||| ||||    
T  2572091 tcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtccgataccg 2572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 8343340 - 8343445
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | |||||||||||||||| |||||||    || || ||||| |||||| ||||||||||  |||| | |||||| | ||||||| ||||    
T  8343340 tcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgc 8343439  T
Q  148 ttcata 153  Q
    ||||||    
T  8343440 ttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 11944689 - 11944794
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||| ||| |||||||| | ||||| |||||||||   | ||| |||| ||| |||||||||||||| |||| | |||||| | |||||| |||||    
T  11944689 tcacataactcagtgtaattatatgtgtcggtgtcgtgttgatgtcatacacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgc 11944788  T
Q  148 ttcata 153  Q
    ||||||    
T  11944789 ttcata 11944794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 13403179 - 13403224
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||    
T  13403179 tccgacaccgagacacgcttaattcaaggagtgtccgtgcttcata 13403224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 21465440 - 21465541
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    ||||||| ||||||||||||||||  ||||||||||||| || ||||| |||||| ||| |||| |  | || | ||||   ||||||||||||||||||    
T  21465440 ataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttca 21465539  T
Q  152 ta 153  Q
    ||    
T  21465540 ta 21465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 29656007 - 29655938
Alignment:
Q  54 aattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacac 123  Q
    |||| ||| |||||||||||||  | ||||||||||| || |||||||||| |||| |||||||||||||    
T  29656007 aatttaatataattacaagtgtaggcgtcgtgtcagtgtcggacacaacacatatctgacaccgaaacac 29655938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 1926013 - 1926093
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaat 130  Q
    ||||||||||||||||| | |  |||| || | ||||| ||| ||||||| | |||||||||||||||| |||||||||||    
T  1926013 acataattcaatgtaatcatatatgtcggtatagtgtcggtaccagacacgatacgtatccgacaccgagacacacttaat 1926093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 6065659 - 6065587
Alignment:
Q  81 tcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||| | || ||||| |||| | |||||||||| ||||| | |||| ||||||||||||||||||||||    
T  6065659 tcgtgtcaatgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 3951547 - 3951477
Alignment:
Q  83 gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| || |||||||| |||||| || ||||| | ||||| | ||||||||||||| |||||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcata 3951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 4122280 - 4122182
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttc 150  Q
    |||||||| |||||||| | ||||| |||| |||||| | ||| |||| |||||| |  ||||||| |||||   |||||||| |||||||||||||||    
T  4122280 ataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgcttc 4122182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 22197777 - 22197676
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtc-gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtg 146  Q
    |||||||||| | |||||||||||||||| ||||| ||||| || || ||||  |||||| |||||||||| | ||| | |||||  |||||||||||||    
T  22197777 tcacataatttagtgtaattacaagtgtcagtgtcagtgtc-gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtg 22197679  T
Q  147 ctt 149  Q
    |||    
T  22197678 ctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 25566865 - 25566903
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgt 86  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  25566865 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 13397624 - 13397669
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||| |||| | |||| ||||||||||||||||||||||    
T  13397624 tccgacaccgagacacgcctaattcaaggagtgtccgtgcttcata 13397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 34127206 - 34127173
Alignment:
Q  120 acacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| |||||||||||||||||||||||||||    
T  34127206 acacacctaatccaaggagtgtccgtgcttcata 34127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 14209137 - 14209242
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||| || || ||||| |||||| | ||||| ||  | |||| ||||||||| |||||||||||    
T  14209137 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgc 14209236  T
Q  148 ttcata 153  Q
    ||||||    
T  14209237 ttcata 14209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 49651821 - 49651717
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||| | | | ||||| |||| ||||||||||||  |||||| |||||| || |||||||||||    
T  49651821 tcacataattcactgtaattacaagtgtcggtgtcgtgtc-ggaccggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgc 49651723  T
Q  148 ttcata 153  Q
    ||||||    
T  49651722 ttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 15796325 - 15796218
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    |||||||| ||||||||||| |||| |||||||||  || || |||||||||||| ||| |||||| ||||| | |||||||| |||||| |||||||||    
T  15796325 ataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttca 15796226  T
Q  152 tatctact 159  Q
    || |||||    
T  15796225 tagctact 15796218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 14216920 - 14217021
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    |||||||| |||||||||||||||| ||||||||| ||| || ||||| |||||| | |||||| |  |||||| |||||| || |||||||||||||||    
T  14216920 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14217019  T
Q  152 ta 153  Q
    ||    
T  14217020 ta 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 14223049 - 14223150
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    |||||||| |||||||||||||||| ||||||||| ||| || ||||| |||||| | |||||| |  |||||| |||||| || |||||||||||||||    
T  14223049 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14223148  T
Q  152 ta 153  Q
    ||    
T  14223149 ta 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 14832123 - 14832192
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccg 117  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||| ||||| |||||| ||||||||||    
T  14832123 tcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccg 14832192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 41961685 - 41961580
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||| ||||  |||||||||||||||| |||||||||| ||||| ||||| |||||| |||||||| |  |||| | |||||| || |||||||||||    
T  41961685 tcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgc 41961586  T
Q  148 ttcata 153  Q
    ||||||    
T  41961585 ttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 34185158 - 34185053
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| |||||| |||||||||||||||| ||||||||||  | || ||||  ||| || ||||||||||  |||| | |||||| ||||||||||||||    
T  34185158 tcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 34185059  T
Q  148 ttcata 153  Q
    ||||||    
T  34185058 ttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 4987326 - 4987222
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||  ||| |||||| || |  ||||| |||||| ||||||||||  |||| | |||||| |||||||||||| |    
T  4987326 tcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtac 4987227  T
Q  148 ttcat 152  Q
    |||||    
T  4987226 ttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 55212987 - 55213091
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | || ||||||||||||| |||| ||||| || || | |||||||||| ||||||||||| |||| | ||||||||| ||| |||||||    
T  55212987 tcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgc 55213085  T
Q  148 ttcata 153  Q
    | ||||    
T  55213086 tacata 55213091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 28918025 - 28918126
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| ||||||||         ||||| |||||| |||||||| |  |||| | ||||||||||||||||| |||    
T  28918025 tcacataattcagtgtaattacaagtgtcggtgtcgtg---------gacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgc 28918115  T
Q  148 ttcatatctac 158  Q
    ||||| |||||    
T  28918116 ttcatgtctac 28918126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 55401135 - 55401193
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| |||||| ||||||||||| |||| | |||||| ||||||||||||||||||||    
T  55401135 gacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 750653 - 750590
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccg 111  Q
    |||||||||||  || ||||||||||||| |||||||||| ||||| ||||| |||||| ||||    
T  750653 tcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccg 750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 11252024 - 11252094
Alignment:
Q  83 gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| || ||||||||||||||| |||| || || ||||| | |||||| ||||||||| ||||||||||    
T  11252024 gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcata 11252094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 16000008 - 15999950
Alignment:
Q  96 acacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcatat 154  Q
    |||| |||||| ||||||||||  |||| | ||||||||||||||||||||| ||||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcatat 15999950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 303233 - 303184
Alignment:
Q  104 cgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||||||| ||||||| | |||||||||||||| ||||| ||||||    
T  303233 cgtatccgacactgaaacacgcctaatccaaggagtgaccgtgtttcata 303184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 4991000 - 4990951
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacac 99  Q
    |||||||||| |||||||||||||||| | |||||||  |||||||||||    
T  4991000 acataattcagtgtaattacaagtgtcggcgtcgtgttggtatcagacac 4990951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 28812539 - 28812644
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||| ||||||||||| |||||||||  || |||||||| | || | ||||||| |   |||| | |||||| ||||||||| ||||    
T  28812539 tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgc 28812638  T
Q  148 ttcata 153  Q
     |||||    
T  28812639 ctcata 28812644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 17276793 - 17276845
Alignment:
Q  101 acacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| ||||||||||| || ||| |||||| || |||||||||||||||||    
T  17276793 acacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcata 17276845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 3884 - 3779
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||||||||||| |||||||||  || || ||||| |||| | ||||||| ||| |||| | |||||| |||||||||| |||    
T  3884 tcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgc 3785  T
Q  148 ttcata 153  Q
    ||||||    
T  3784 ttcata 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 71749 - 71854
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| |||||| ||||||||| |||||| |||||||||| || || |||||||||||| ||||||||||  ||||   |||||| ||||||||| ||||    
T  71749 tcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgc 71848  T
Q  148 ttcata 153  Q
    ||||||    
T  71849 ttcata 71854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 35056896 - 35056997
Alignment:
Q  52 ataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttca 151  Q
    |||||||| |||||||| | ||||| |||||||||| || || ||||| |||||| |||||||| ||||||| | |||||  ||||||||||||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttca 35056995  T
Q  152 ta 153  Q
    ||    
T  35056996 ta 35056997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 26769548 - 26769640
Alignment:
Q  61 tgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||||||||||| ||||| |||| ||||| ||||| |||||| |||||||| |  |||| | |||||| ||||||||||||||||||||    
T  26769548 tgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 30717565 - 30717460
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| ||||||||||||||||  |||||||||  | || ||||| |||||| | |||||| |  | || | |||||||||||||||||||||    
T  30717565 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgc 30717466  T
Q  148 ttcata 153  Q
    ||||||    
T  30717465 ttcata 30717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 37419767 - 37419872
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    ||||| |||||| |||||||||||||| | |||||||||| || || ||||| |  ||| ||||||||||  |||| | |||||| ||||||||||||||    
T  37419767 tcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 37419866  T
Q  148 ttcata 153  Q
    ||||||    
T  37419867 ttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 12668456 - 12668353
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| |||||||| ||||||| |||||||||| ||||  || || ||||||||| ||||  |  |||||| |||| | |||||| |||||||||    
T  12668456 acataattcagtgtaattataagtgtcggtgtcgtgtcggtattggatacgacacgtatctgacattgggacacacctaattcgaggagtatccgtgctt 12668357  T
Q  150 cata 153  Q
    ||||    
T  12668356 cata 12668353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 18841024 - 18840954
Alignment:
Q  83 gtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| || |||||||| |||| | ||||||||||  |||||| |||||| ||||||||||||||||||||    
T  18841024 gtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 37559043 - 37559095
Alignment:
Q  101 acacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||| ||||||||||  |||| |||||||| ||||||||||||||||||||    
T  37559043 acacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 5040758 - 5040793
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcg 83  Q
    ||||||||||||||||||||||||||||| ||||||    
T  5040758 tcacataattcaatgtaattacaagtgtcggtgtcg 5040793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 153
Target Start/End: Complemental strand, 11223896 - 11223794
Alignment:
Q  50 acataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgctt 149  Q
    |||||||||| |||||||||||||||| ||||| |||  || || ||||| |||| | || |||||||  |||| | |||||  ||||||||||||||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgctt 11223798  T
Q  150 cata 153  Q
    ||||    
T  11223797 cata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 33153448 - 33153487
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  33153448 tcacataattcagtgtaattacaagtgtccgtgtcgtgtc 33153487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 37559001 - 37559036
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcg 83  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37559001 tcacataattcaatgtaattacaagtgtcggtgtcg 37559036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 11307978 - 11307935
Alignment:
Q  108 tccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||    
T  11307978 tccgacaccgaaacac--ttaatccgaggagtgtccgtgcttcata 11307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 34006973 - 34006931
Alignment:
Q  111 gacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||    
T  34006973 gacaccggaacacacctaattcaaggagtgtccgtgcttcata 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 38117158 - 38117100
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    |||||||||||| ||||||||||  |||| | |||||| ||| ||||||||||||||||    
T  38117158 gacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 44860347 - 44860449
Alignment:
Q  51 cataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttc 150  Q
    ||||||||| |||||||| | ||||| |||||||||  || |  ||||| ||| || ||||||| ||  |||||| |||| | |||||||||||||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttc 44860446  T
Q  151 ata 153  Q
    |||    
T  44860447 ata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 18622687 - 18622720
Alignment:
Q  120 acacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||||| ||||||||||||||||||||    
T  18622687 acacacttaatccgaggagtgtccgtgcttcata 18622720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 15657888 - 15657992
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| ||||||||||| |||| |||||||||   | || ||| | |||||| |||||| |||  |||| | || ||| |||||||||| |||    
T  15657888 tcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgc 15657987  T
Q  148 ttcat 152  Q
    |||||    
T  15657988 ttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 263406 - 263303
Alignment:
Q  49 cacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgct 148  Q
    ||||||||||| |||||||| ||||||| |||||||||| || |||||||| |||||| | ||| ||| | |||| | |||||| ||||||||||||| |    
T  263406 cacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggt 263307  T
Q  149 tcat 152  Q
    ||||    
T  263306 tcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 53204 - 53303
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||| |||||||| ||||||| ||| |||||| || || ||||  |||||| ||||||||||  ||||  |||||||||| |||||||||||    
T  53204 tcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 8670 - 8565
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||||  | ||||||||| |||| |||||||||| ||||| ||||| | |||| |||||||| |  |||| | |||| | ||||||||||||||    
T  8670 tcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgc 8571  T
Q  148 ttcata 153  Q
    ||||||    
T  8570 ttcata 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 241618 - 241723
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||||||||| | ||||||||  |||||| |||||||||  || || ||||| |||||| ||||||||||  |||| | |||||| || |||||||||||    
T  241618 tcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgc 241717  T
Q  148 ttcata 153  Q
    ||||||    
T  241718 ttcata 241723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 90900 - 90961
Alignment:
Q  92 tcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||||||||||| ||||||||| |||||| | |||||||| ||||||  ||||||||||    
T  90900 tcagacacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgcttcata 90961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 20196 - 20235
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtc 87  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  20196 tcacataattcagtgtaattacaagtgtcagtgtcgtgtc 20235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 461 - 403
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| || ||| ||||||||||  |||||| |||||| ||||||||||||||||||||    
T  461 gacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 14587 - 14645
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||| |||||| ||||||||||| |||| | ||||| ||||||||| |||||||||||    
T  14587 gacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcata 14645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 19640 - 19682
Alignment:
Q  95 gacacaacacgtatccgacaccgaaacacacttaatccaagga 137  Q
    ||||| |||||| ||||||||||||||||||||||||| ||||    
T  19640 gacacgacacgtgtccgacaccgaaacacacttaatccgagga 19682  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 23794 - 23832
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgt 86  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  23794 tcacataattcagtgtaattacaagtgtcggtgtcgtgt 23832  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 13453 - 13542
Alignment:
Q  64 aattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgcttcata 153  Q
    ||||||| ||||| | |||||||| || || ||||| |||||||| ||||| ||  | |||| |||||| |||||||||||| |||||||    
T  13453 aattacatgtgtcggggtcgtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcata 13542  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 13491 - 13523
Alignment:
Q  120 acacacttaatccaaggagtgtccgtgcttcat 152  Q
    |||||| ||||||||||||||||||||||||||    
T  13491 acacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 21836 - 21804
Alignment:
Q  120 acacacttaatccaaggagtgtccgtgcttcat 152  Q
    |||||| ||||||||||||||||||||||||||    
T  21836 acacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 9782 - 9678
Alignment:
Q  48 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcagtatcagacacaacacgtatccgacaccgaaacacacttaatccaaggagtgtccgtgc 147  Q
    |||| ||||||| |||||||| | ||||| |||||||||  || |||||||| |||| | || |||| ||  ||||   |||||| ||||||||||||||    
T  9782 tcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgc 9683  T
Q  148 ttcat 152  Q
    |||||    
T  9682 ttcat 9678  T

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