View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2035_high_9 (Length: 292)
Name: NF2035_high_9
Description: NF2035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2035_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 10670403 - 10670665
Alignment:
| Q |
14 |
atattatgtagagaataaagttaacaacaaatgcatacattgtacttatcaacctaagcagtcgaagaactccaaaaacatggatccaattggtaataga |
113 |
Q |
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| T |
10670403 |
atattatgtagagaagaaagttaacaacaaatgcatacattgtatttatcaacctaagcagtcgaagaactccaaaaacatggatccaattggtaataga |
10670502 |
T |
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| Q |
114 |
taaggaagaaaagtagataaattgaattagaatcgtacctattttgttccaatagaaagtcgctaataggttaaaaagttaccactaatttctgaatcag |
213 |
Q |
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| T |
10670503 |
taagggagaaaagtagataaattgaattagaattgtacctattttgttccaagagaaagtcactaataggttaaaaagttcccactaatttctgaatcag |
10670602 |
T |
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| Q |
214 |
atttgtttttagtggaaaatcatccaaaccataattgtttcaattaagaaactaatatagttt |
276 |
Q |
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| T |
10670603 |
atttgtttttagaggaaaatcatccaaaccataattgtttcaattaagaaactaatatagttt |
10670665 |
T |
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