View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2035_low_3 (Length: 397)

Name: NF2035_low_3
Description: NF2035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2035_low_3
NF2035_low_3
[»] chr6 (17 HSPs)
chr6 (19-193)||(34892097-34892272)
chr6 (211-258)||(10781147-10781194)
chr6 (210-258)||(6517502-6517550)
chr6 (212-258)||(7905244-7905290)
chr6 (214-258)||(7160807-7160851)
chr6 (214-258)||(22502777-22502821)
chr6 (210-258)||(31406877-31406925)
chr6 (211-258)||(7161183-7161230)
chr6 (211-258)||(21836409-21836456)
chr6 (211-258)||(22503153-22503200)
chr6 (211-258)||(32593490-32593537)
chr6 (209-258)||(21836030-21836079)
chr6 (211-259)||(14196615-14196663)
chr6 (214-258)||(31407257-31407301)
chr6 (211-258)||(15913927-15913974)
chr6 (214-258)||(7905622-7905666)
chr6 (214-258)||(15913551-15913595)
[»] chr1 (26 HSPs)
chr1 (205-258)||(17188948-17189001)
chr1 (211-258)||(20760884-20760931)
chr1 (211-258)||(8898517-8898564)
chr1 (211-258)||(25885372-25885419)
chr1 (211-258)||(30326496-30326543)
chr1 (211-258)||(37929418-37929465)
chr1 (211-258)||(40714444-40714491)
chr1 (211-258)||(40714822-40714869)
chr1 (211-258)||(45750221-45750268)
chr1 (211-258)||(49955726-49955773)
chr1 (210-258)||(49955346-49955394)
chr1 (211-258)||(8898896-8898943)
chr1 (211-258)||(17189230-17189277)
chr1 (211-258)||(28325182-28325229)
chr1 (211-258)||(31050950-31050997)
chr1 (211-258)||(32558486-32558533)
chr1 (211-258)||(45749842-45749889)
chr1 (213-258)||(44523517-44523562)
chr1 (214-258)||(7371293-7371337)
chr1 (211-283)||(24905167-24905239)
chr1 (211-259)||(28011717-28011765)
chr1 (211-258)||(7371548-7371595)
chr1 (211-258)||(31058436-31058483)
chr1 (211-255)||(25884701-25884745)
chr1 (211-255)||(28324805-28324849)
chr1 (214-258)||(35040993-35041037)
[»] chr8 (31 HSPs)
chr8 (206-257)||(6472395-6472446)
chr8 (201-258)||(41353952-41354009)
chr8 (214-258)||(41353577-41353621)
chr8 (213-258)||(8998068-8998113)
chr8 (209-258)||(44664506-44664555)
chr8 (213-258)||(44664887-44664932)
chr8 (214-258)||(8997859-8997903)
chr8 (210-258)||(15229930-15229978)
chr8 (211-258)||(234119-234166)
chr8 (211-258)||(710530-710577)
chr8 (211-258)||(747742-747789)
chr8 (211-258)||(871637-871684)
chr8 (214-257)||(6471693-6471736)
chr8 (211-258)||(7983428-7983475)
chr8 (211-258)||(35634478-35634525)
chr8 (214-258)||(10445714-10445758)
chr8 (211-259)||(11675043-11675091)
chr8 (211-259)||(23505052-23505100)
chr8 (214-258)||(37542227-37542271)
chr8 (214-258)||(37542604-37542648)
chr8 (214-258)||(42945493-42945537)
chr8 (211-258)||(15230310-15230357)
chr8 (211-258)||(25124942-25124989)
chr8 (211-257)||(23507807-23507853)
chr8 (213-258)||(21432695-21432740)
chr8 (214-259)||(36325583-36325628)
chr8 (211-259)||(11674695-11674743)
chr8 (214-258)||(25124566-25124610)
chr8 (214-258)||(27500092-27500136)
chr8 (211-259)||(36325234-36325282)
chr8 (214-258)||(38003785-38003829)
[»] chr3 (29 HSPs)
chr3 (211-258)||(3469579-3469626)
chr3 (209-258)||(10294565-10294614)
chr3 (210-258)||(13949074-13949122)
chr3 (211-258)||(32306424-32306471)
chr3 (211-258)||(37778652-37778699)
chr3 (211-258)||(40788799-40788846)
chr3 (213-258)||(33506180-33506225)
chr3 (214-258)||(32306803-32306847)
chr3 (214-258)||(33156375-33156419)
chr3 (211-258)||(3469200-3469247)
chr3 (211-258)||(13948780-13948827)
chr3 (215-258)||(29118917-29118960)
chr3 (211-258)||(33506329-33506376)
chr3 (211-258)||(52032518-52032565)
chr3 (214-259)||(10770840-10770885)
chr3 (213-258)||(11910701-11910746)
chr3 (213-258)||(29118529-29118574)
chr3 (213-258)||(29685943-29685988)
chr3 (213-258)||(29686319-29686364)
chr3 (214-258)||(3596112-3596156)
chr3 (211-259)||(36314298-36314346)
chr3 (214-258)||(41421975-41422019)
chr3 (210-258)||(42855686-42855734)
chr3 (214-258)||(52032141-52032185)
chr3 (211-258)||(47551493-47551540)
chr3 (214-259)||(10770493-10770538)
chr3 (225-258)||(35643865-35643898)
chr3 (210-259)||(36314647-36314696)
chr3 (211-259)||(48322726-48322774)
[»] chr7 (23 HSPs)
chr7 (201-258)||(32934727-32934784)
chr7 (210-258)||(42617910-42617958)
chr7 (211-258)||(25453128-25453175)
chr7 (211-258)||(43266266-43266313)
chr7 (211-258)||(43266645-43266692)
chr7 (209-258)||(10600024-10600073)
chr7 (205-258)||(23058808-23058861)
chr7 (209-258)||(32068475-32068524)
chr7 (210-258)||(22081559-22081607)
chr7 (210-258)||(22081938-22081986)
chr7 (214-258)||(42618290-42618334)
chr7 (214-258)||(46204424-46204468)
chr7 (203-258)||(10600328-10600383)
chr7 (211-258)||(27138320-27138367)
chr7 (208-258)||(23058426-23058476)
chr7 (214-258)||(25628481-25628525)
chr7 (214-258)||(28890582-28890626)
chr7 (214-258)||(32068099-32068143)
chr7 (211-259)||(32680595-32680643)
chr7 (211-258)||(33828353-33828400)
chr7 (213-258)||(25628857-25628902)
chr7 (211-280)||(32680923-32680992)
chr7 (214-258)||(32934351-32934395)
[»] scaffold0771 (2 HSPs)
scaffold0771 (210-258)||(1214-1262)
scaffold0771 (211-258)||(920-967)
[»] chr4 (24 HSPs)
chr4 (206-258)||(10407884-10407936)
chr4 (211-258)||(3032582-3032629)
chr4 (211-258)||(22987230-22987277)
chr4 (211-258)||(27069289-27069336)
chr4 (211-258)||(52573607-52573654)
chr4 (211-258)||(54858560-54858607)
chr4 (211-258)||(54858939-54858986)
chr4 (201-258)||(45463452-45463510)
chr4 (213-258)||(45463075-45463120)
chr4 (210-258)||(10408268-10408316)
chr4 (214-258)||(11523952-11523996)
chr4 (214-258)||(22717942-22717986)
chr4 (211-255)||(27149377-27149421)
chr4 (214-258)||(39701288-39701332)
chr4 (211-258)||(16605602-16605649)
chr4 (211-258)||(50504204-50504251)
chr4 (211-258)||(52573228-52573275)
chr4 (211-283)||(22567111-22567183)
chr4 (211-258)||(27068910-27068957)
chr4 (211-258)||(51859785-51859832)
chr4 (211-257)||(50503825-50503871)
chr4 (210-259)||(4983075-4983124)
chr4 (214-258)||(5818154-5818198)
chr4 (211-259)||(9400519-9400567)
[»] chr2 (12 HSPs)
chr2 (214-258)||(8342558-8342602)
chr2 (210-258)||(28226123-28226171)
chr2 (211-258)||(8710847-8710894)
chr2 (212-258)||(41588437-41588483)
chr2 (211-258)||(15604339-15604386)
chr2 (212-258)||(11830365-11830411)
chr2 (214-258)||(6573050-6573094)
chr2 (211-259)||(6573543-6573591)
chr2 (214-258)||(8342190-8342234)
chr2 (211-258)||(41587235-41587282)
chr2 (211-283)||(14900496-14900568)
chr2 (211-259)||(33740052-33740100)
[»] scaffold0006 (2 HSPs)
scaffold0006 (211-258)||(222168-222215)
scaffold0006 (209-258)||(221789-221838)
[»] chr5 (9 HSPs)
chr5 (207-258)||(8875445-8875496)
chr5 (211-258)||(17544427-17544474)
chr5 (211-258)||(20153294-20153341)
chr5 (211-258)||(33871717-33871764)
chr5 (217-258)||(8875646-8875687)
chr5 (210-258)||(20152780-20152828)
chr5 (211-258)||(3656797-3656844)
chr5 (211-259)||(6758214-6758262)
chr5 (210-258)||(33871338-33871386)
[»] scaffold0388 (1 HSPs)
scaffold0388 (214-258)||(12618-12662)
[»] scaffold0328 (1 HSPs)
scaffold0328 (211-258)||(11519-11566)
[»] scaffold0599 (1 HSPs)
scaffold0599 (213-258)||(2395-2440)
[»] scaffold0205 (1 HSPs)
scaffold0205 (211-283)||(21009-21081)
[»] scaffold0042 (1 HSPs)
scaffold0042 (213-258)||(12159-12204)


Alignment Details
Target: chr6 (Bit Score: 156; Significance: 9e-83; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 34892097 - 34892272
Alignment:
Q  19 ccagggacagtgcagcggagtatggagaattggtggaagcggttttggtggagaaagaggacgcagtggtgaaacaggaggatacggcaaggctgttgct 118  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34892097 ccagggacggtgcagcggagtatggagaattggtggaagcggttttggtggagaaagaggatgcagtggtgaaacaggaggatacggcaaggctgttgct 34892196  T
Q  119 taggtccatcgcacctcaatgtagcttcaatgtgtttctttgcacttccaataat-aaatctaattgatcttgtta 193  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  34892197 taggtccatcgcacctcaatgtagcttcaatgtgtttctttgcagttccaataataaaatctaattgatcttgtta 34892272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 10781147 - 10781194
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10781147 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaatt 10781194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 6517502 - 6517550
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  6517502 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 6517550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 7905244 - 7905290
Alignment:
Q  212 gcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 7905290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 7160807 - 7160851
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  7160807 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 7160851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 22502777 - 22502821
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  22502777 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 22502821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 31406877 - 31406925
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||||    
T  31406877 tggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 31406925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 7161230 - 7161183
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||    
T  7161230 ggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaatt 7161183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 21836456 - 21836409
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  21836456 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaatt 21836409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 22503200 - 22503153
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||    
T  22503200 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 22503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 32593490 - 32593537
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  32593490 ggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaatt 32593537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 21836030 - 21836079
Alignment:
Q  209 atggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||| |||||||| |||||||| ||| |||||||||||||||||||||||    
T  21836030 atggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaatt 21836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 14196615 - 14196663
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  14196615 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 14196663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 31407301 - 31407257
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| || ||||||||| |||||||||||||||||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaatt 31407257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 15913974 - 15913927
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||| | ||||||||||||||    
T  15913974 ggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatt 15913927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 7905666 - 7905622
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||| |||||||| |||||    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatt 7905622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 15913551 - 15913595
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||||||  || |||||||||||||||||||||||    
T  15913551 ttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaatt 15913595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 17188948 - 17189001
Alignment:
Q  205 tattatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  17188948 tattatggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 17189001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 20760931 - 20760884
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20760931 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaatt 20760884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 8898517 - 8898564
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  8898517 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 8898564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 25885419 - 25885372
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  25885419 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 25885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 30326496 - 30326543
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 30326543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 37929418 - 37929465
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37929418 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 37929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 40714444 - 40714491
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40714444 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 40714491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 40714869 - 40714822
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40714869 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 40714822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 45750268 - 45750221
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  45750268 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 45750221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 49955773 - 49955726
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  49955773 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 49955726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 49955346 - 49955394
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  49955346 tggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 49955394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 8898943 - 8898896
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  8898943 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaatt 8898896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 17189277 - 17189230
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 17189230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 28325229 - 28325182
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  28325229 ggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaatt 28325182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 31050950 - 31050997
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  31050950 ggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaatt 31050997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 32558533 - 32558486
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  32558533 ggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaatt 32558486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 45749842 - 45749889
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  45749842 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaatt 45749889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 44523562 - 44523517
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaatt 44523517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 7371293 - 7371337
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||    
T  7371293 ttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaatt 7371337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 24905167 - 24905239
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattctcccatttcatttctaatccttgc 283  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||  || | | ||| |||||||||||    
T  24905167 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgc 24905239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 28011765 - 28011717
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  28011765 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 28011717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 7371595 - 7371548
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||| ||| |||||||||||| ||||||| |||||||||||||||    
T  7371595 ggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 7371548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 31058483 - 31058436
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||| | |||||||||||||    
T  31058483 ggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaatt 31058436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 25884701 - 25884745
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaa 255  Q
    ||||||||||| ||||||||| || ||||||| ||||||||||||    
T  25884701 ggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 28324805 - 28324849
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaa 255  Q
    ||||||||||| |||||| ||||| |||||||||||| |||||||    
T  28324805 ggcttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaa 28324849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 35041037 - 35040993
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||||||||||  |||||| |||||||||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaatt 35040993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 6472446 - 6472395
Alignment:
Q  206 attatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaat 257  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  6472446 attatggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 41354009 - 41353952
Alignment:
Q  201 attttattatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41354009 atttttttaaggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaatt 41353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 41353577 - 41353621
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaatt 41353621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 8998113 - 8998068
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 8998068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 44664506 - 44664555
Alignment:
Q  209 atggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||    
T  44664506 atggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 44664555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 44664932 - 44664887
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 44664887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 8997859 - 8997903
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  8997859 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 8997903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 15229930 - 15229978
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| ||||| |||||| |||||||||||||||||||||||    
T  15229930 tggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaatt 15229978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 234166 - 234119
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  234166 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 234119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 710577 - 710530
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  710577 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 710530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 747789 - 747742
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  747789 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 747742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 871684 - 871637
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  871684 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 871637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 6471693 - 6471736
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaat 257  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  6471693 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 7983428 - 7983475
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||    
T  7983428 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 7983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 35634525 - 35634478
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  35634525 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaatt 35634478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 10445758 - 10445714
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||    
T  10445758 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaatt 10445714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 11675091 - 11675043
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  11675091 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 11675043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 23505052 - 23505100
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  23505052 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 23505100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 37542227 - 37542271
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||||||| || |||||||||||||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaatt 37542271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 37542648 - 37542604
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||| || |||||| |||||||||||||||||||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaatt 37542604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 42945537 - 42945493
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaatt 42945493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 15230357 - 15230310
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||| |||||| |||||||| ||||||||||||||    
T  15230357 ggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaatt 15230310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 25124989 - 25124942
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| || |||||||||||| |||||||| ||||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaatt 25124942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 23507853 - 23507807
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaat 257  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||    
T  23507853 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaat 23507807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 21432695 - 21432740
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| ||||||| |||||| ||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaatt 21432740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 36325628 - 36325583
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    |||||||| || || |||||| ||||||||||||||||||||||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 36325583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 11674695 - 11674743
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| |||||||||||| |||||||||||    
T  11674695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattc 11674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 25124566 - 25124610
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| | |||||| ||| |||||||||||||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaatt 25124610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 27500092 - 27500136
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| ||||||  |||||||||||||||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaatt 27500136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 36325234 - 36325282
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || ||||||||||||||| ||| |||||||||||    
T  36325234 ggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattc 36325282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 38003829 - 38003785
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| ||||||| ||| |||||||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaatt 38003785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 3469626 - 3469579
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3469626 ggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaatt 3469579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 10294565 - 10294614
Alignment:
Q  209 atggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  10294565 atggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 10294614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 13949122 - 13949074
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  13949122 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 13949074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 32306424 - 32306471
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32306424 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 32306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 37778699 - 37778652
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  37778699 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 37778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 40788846 - 40788799
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40788846 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 40788799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 33506180 - 33506225
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 33506225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 32306847 - 32306803
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 32306803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 33156419 - 33156375
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  33156419 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 33156375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 3469200 - 3469247
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||    
T  3469200 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaatt 3469247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 13948780 - 13948827
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  13948780 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 13948827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 29118960 - 29118917
Alignment:
Q  215 taatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 29118917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 33506376 - 33506329
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  33506376 ggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaatt 33506329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 52032565 - 52032518
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  52032565 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 52032518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 10770885 - 10770840
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    |||||||| || || |||||||||||||||||||||||||||||||    
T  10770885 ttaatgatgtgattagtccttacaattaggcgtcatttaaaaattc 10770840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 11910701 - 11910746
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 11910746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 29118529 - 29118574
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaatt 29118574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 29685943 - 29685988
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaatt 29685988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 29686364 - 29686319
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| |||||||||||||||| ||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaatt 29686319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 3596112 - 3596156
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaatt 3596156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 36314298 - 36314346
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  36314298 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 36314346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 41421975 - 41422019
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||    
T  41421975 ttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaatt 41422019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 42855734 - 42855686
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| ||||| | |||| |||||||||||||||||||||||    
T  42855734 tggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaatt 42855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 52032141 - 52032185
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||    
T  52032141 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaatt 52032185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 47551493 - 47551540
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||  ||||||||||||||    
T  47551493 ggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaatt 47551540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 10770493 - 10770538
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    |||||||| || || |||||| ||||||||||||||||||||||||    
T  10770493 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 10770538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 35643865 - 35643898
Alignment:
Q  225 tttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||| |||||||||||||||||||||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaatt 35643898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 36314696 - 36314647
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    |||||||||||| || || |||||| |||||||||||| |||||||||||    
T  36314696 tggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattc 36314647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 48322774 - 48322726
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| |||||||||||| |||||||||||    
T  48322774 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattc 48322726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 32934784 - 32934727
Alignment:
Q  201 attttattatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32934784 attttataaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 32934727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 42617910 - 42617958
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  42617910 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 42617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 25453128 - 25453175
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 25453175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 43266266 - 43266313
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  43266266 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 43266313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 43266692 - 43266645
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  43266692 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 43266645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 10600024 - 10600073
Alignment:
Q  209 atggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  10600024 atggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 10600073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 23058861 - 23058808
Alignment:
Q  205 tattatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||    
T  23058861 tattaaggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaatt 23058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 32068524 - 32068475
Alignment:
Q  209 atggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  32068524 atggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaatt 32068475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 22081559 - 22081607
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  22081559 tggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaatt 22081607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 22081986 - 22081938
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  22081986 tggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaatt 22081938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 42618334 - 42618290
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  42618334 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 42618290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 46204424 - 46204468
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 46204468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 10600383 - 10600328
Alignment:
Q  203 tttattatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||| ||| |||||||| ||||||||| || |||||||||||||||||||||||    
T  10600383 tttattttggtttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaatt 10600328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 27138367 - 27138320
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  27138367 ggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaatt 27138320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 23058426 - 23058476
Alignment:
Q  208 tatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||||| |||||||||||| |||||| | ||||||||||||||    
T  23058426 tatggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaatt 23058476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 25628481 - 25628525
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||| ||| |||||||||||||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaatt 25628525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 28890582 - 28890626
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 28890626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 32068099 - 32068143
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| ||||||| |||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 32068143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 32680595 - 32680643
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||    
T  32680595 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattc 32680643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 33828400 - 33828353
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||  ||||||||||| |||||||| ||||||||||||||    
T  33828400 ggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaatt 33828353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 25628902 - 25628857
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| ||| |||||||| |||||| ||||||||||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaatt 25628857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 32680992 - 32680923
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattctcccatttcatttctaatcct 280  Q
    ||||||||||| || || |||||| |||||||||||| |||||||||||  |||| | ||| ||||||||    
T  32680992 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcct 32680923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 32934351 - 32934395
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||| ||||| |||||||| ||||||||||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaatt 32934395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 1262 - 1214
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  1262 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 1214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 920 - 967
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  920 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaatt 967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 10407884 - 10407936
Alignment:
Q  206 attatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  10407884 attatggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaatt 10407936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 3032582 - 3032629
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  3032582 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 3032629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 22987277 - 22987230
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  22987277 ggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaatt 22987230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 27069336 - 27069289
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  27069336 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 27069289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 52573654 - 52573607
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  52573654 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 52573607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 54858560 - 54858607
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  54858560 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 54858607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 54858986 - 54858939
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  54858986 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 54858939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 45463510 - 45463452
Alignment:
Q  201 attttatta-tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| ||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  45463510 attttattaatggtttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaatt 45463452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 45463075 - 45463120
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 45463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 10408316 - 10408268
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||    
T  10408316 tggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaatt 10408268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 11523952 - 11523996
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 11523996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 22717942 - 22717986
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||||||||||| |||||||||||||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaatt 22717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 27149421 - 27149377
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaa 255  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  27149421 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa 27149377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 39701332 - 39701288
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  39701332 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 39701288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 16605602 - 16605649
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  16605602 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaatt 16605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 50504251 - 50504204
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  50504251 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaatt 50504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 52573228 - 52573275
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||    
T  52573228 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaatt 52573275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 22567183 - 22567111
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattctcccatttcatttctaatccttgc 283  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||  || | | ||| |||||||||||    
T  22567183 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgc 22567111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 27068910 - 27068957
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||| ||| |||||||||||| ||||||||| |||||||||||||    
T  27068910 ggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaatt 27068957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 51859832 - 51859785
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| ||||||| ||| |||||||||||    
T  51859832 ggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaatt 51859785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 50503825 - 50503871
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaat 257  Q
    ||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  50503825 ggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaat 50503871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 4983124 - 4983075
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    |||||||||||| || || |||||| |||||||||||| |||||||||||    
T  4983124 tggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattc 4983075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 5818198 - 5818154
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||||||| ||  ||||||||||||||||||||||    
T  5818198 ttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaatt 5818154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 9400519 - 9400567
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| |||||||| |||||||||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattc 9400567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 8342602 - 8342558
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaatt 8342558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 28226171 - 28226123
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  28226171 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 28226123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 8710894 - 8710847
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  8710894 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 8710847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 41588483 - 41588437
Alignment:
Q  212 gcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaatt 41588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 15604339 - 15604386
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  15604339 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaatt 15604386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 11830365 - 11830411
Alignment:
Q  212 gcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 11830411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 6573050 - 6573094
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||| | |||||||||||||||||||||||    
T  6573050 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatt 6573094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 6573543 - 6573591
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||||||    
T  6573543 ggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattc 6573591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 8342190 - 8342234
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||    
T  8342190 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaatt 8342234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 41587235 - 41587282
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||| | ||||||||||||||    
T  41587235 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaatt 41587282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 14900496 - 14900568
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattctcccatttcatttctaatccttgc 283  Q
    ||||||||||| || || |||||| ||||||||||||||| ||||||||  || | | ||| |||||||||||    
T  14900496 ggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatccttgc 14900568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 33740100 - 33740052
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    |||||| |||| ||||| | ||||||||||||||| |||||||||||||    
T  33740100 ggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattc 33740052  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 222215 - 222168
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  222215 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 222168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 221789 - 221838
Alignment:
Q  209 atggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||| |||||||| |||||||| ||| |||||||||||||||||||||||    
T  221789 atggtttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaatt 221838  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 258
Target Start/End: Original strand, 8875445 - 8875496
Alignment:
Q  207 ttatggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  8875445 ttatggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaatt 8875496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 17544474 - 17544427
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  17544474 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 17544427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 20153341 - 20153294
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  20153341 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaatt 20153294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 33871764 - 33871717
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  33871764 ggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaatt 33871717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 8875687 - 8875646
Alignment:
Q  217 atgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 8875646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 20152780 - 20152828
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| |||||||||| | |||||| ||||||||||||||||    
T  20152780 tggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaatt 20152828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 3656844 - 3656797
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| ||||||| |||| ||||||| |||||||||||||||    
T  3656844 ggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaatt 3656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 6758262 - 6758214
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattc 259  Q
    ||||||||||| || || |||||| |||||||||||| |||||||||||    
T  6758262 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattc 6758214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 33871338 - 33871386
Alignment:
Q  210 tggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||||||| ||||| |||||| |||||| | ||||||||||||||    
T  33871338 tggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaatt 33871386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 12662 - 12618
Alignment:
Q  214 ttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  12662 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatt 12618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 11566 - 11519
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  11566 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaatt 11519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 2395 - 2440
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaatt 2440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 21009 - 21081
Alignment:
Q  211 ggcttaatgatctgtttcgtccttacaattaggcgtcatttaaaaattctcccatttcatttctaatccttgc 283  Q
    ||||||||||| || || |||||| ||||||||||||||||||||||||  || | | ||| |||||||||||    
T  21009 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgc 21081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12204 - 12159
Alignment:
Q  213 cttaatgatctgtttcgtccttacaattaggcgtcatttaaaaatt 258  Q
    ||||||||| |||||||||||| ||||||  |||||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaatt 12159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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