View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20362_high_12 (Length: 468)
Name: NF20362_high_12
Description: NF20362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20362_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 339; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 21 - 436
Target Start/End: Original strand, 22725140 - 22725549
Alignment:
| Q |
21 |
atcctcacataatgaatgcaaaagggatttagattctttatagttgagacaaacaattatgtgatcttaatgaattgacatgaattctgactttgcaaaa |
120 |
Q |
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| T |
22725140 |
atcctcacataatgaatgccaaagggatttagattctttatagttgagacaaacaattatgtgatcttaataaattgacacgaattctgactttgcaaaa |
22725239 |
T |
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| Q |
121 |
cgaattcaaaatgtgaagttggaatttgaatatttcaatcaagataagagagtcttgtaattctcaaccttgtgaataatatatgtgactgaatgcaatc |
220 |
Q |
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| T |
22725240 |
cgaattcaaaatgtgaagttggaatttgaatatttcaatcaagataagagagtcttgtaattctcaaccttgtga-----atatgtgattgaatgcaatc |
22725334 |
T |
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| Q |
221 |
atttttagtttaaaatacctaacaaaaatcttatcaagtgatttttgtatagaaaaaatttaattaaattaaataatgtcaaattgcaatttgcatccaa |
320 |
Q |
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| T |
22725335 |
atttttagtttaaaatacccaacaaaaatcttatcaagtgatttttgtatagaaaaaatttaattgaattaaataatgtcaaattgcaatttgcatccaa |
22725434 |
T |
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| Q |
321 |
caattattattgttattatttacataagaccatcaaatannnnnnnagtggtatccttccataaagcaaaatctagagaggaatatatatagggaaaaat |
420 |
Q |
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| T |
22725435 |
caattattattgttatta-ttacataagaccatcaaatatttttttagtggtatccttccataaagctaaatctagagaggaatatatatagggaaaaat |
22725533 |
T |
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| Q |
421 |
catcaccctaagttaa |
436 |
Q |
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|||||||||||||||| |
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| T |
22725534 |
catcaccctaagttaa |
22725549 |
T |
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