View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20362_high_35 (Length: 277)

Name: NF20362_high_35
Description: NF20362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20362_high_35
NF20362_high_35
[»] chr7 (43 HSPs)
chr7 (18-114)||(3622448-3622544)
chr7 (27-114)||(48459744-48459831)
chr7 (15-114)||(42740414-42740513)
chr7 (18-114)||(37562595-37562691)
chr7 (15-114)||(43631684-43631782)
chr7 (45-114)||(3750738-3750807)
chr7 (18-114)||(3342815-3342911)
chr7 (22-114)||(3375519-3375611)
chr7 (18-114)||(44967387-44967483)
chr7 (21-112)||(32205953-32206044)
chr7 (28-114)||(37639465-37639551)
chr7 (18-110)||(12632075-12632167)
chr7 (27-114)||(386469-386556)
chr7 (31-114)||(47217529-47217612)
chr7 (28-114)||(10371946-10372032)
chr7 (18-103)||(39391136-39391221)
chr7 (30-114)||(38230105-38230189)
chr7 (22-114)||(43737927-43738019)
chr7 (18-114)||(47021944-47022040)
chr7 (18-112)||(34365972-34366065)
chr7 (18-111)||(9456130-9456222)
chr7 (18-114)||(34010365-34010460)
chr7 (27-114)||(42904587-42904674)
chr7 (27-114)||(46541634-46541721)
chr7 (31-111)||(24770902-24770982)
chr7 (18-114)||(36920166-36920262)
chr7 (18-102)||(37008351-37008434)
chr7 (18-114)||(34010949-34011045)
chr7 (50-103)||(39634164-39634217)
chr7 (50-103)||(42752190-42752243)
chr7 (30-114)||(41715694-41715778)
chr7 (18-114)||(48134605-48134700)
chr7 (30-105)||(32186977-32187052)
chr7 (53-102)||(38494276-38494325)
chr7 (50-111)||(39977609-39977670)
chr7 (54-114)||(12964659-12964719)
chr7 (51-103)||(16079460-16079512)
chr7 (53-101)||(20088929-20088977)
chr7 (50-101)||(4228604-4228655)
chr7 (27-101)||(1766459-1766533)
chr7 (27-101)||(33746423-33746497)
chr7 (70-114)||(19097474-19097518)
chr7 (50-102)||(29829310-29829362)
[»] chr4 (69 HSPs)
chr4 (18-114)||(39636774-39636870)
chr4 (18-114)||(42944899-42944995)
chr4 (18-114)||(43772124-43772220)
chr4 (18-114)||(49136511-49136607)
chr4 (15-114)||(49519716-49519815)
chr4 (18-114)||(46830070-46830166)
chr4 (18-114)||(4954052-4954148)
chr4 (18-114)||(6138621-6138717)
chr4 (30-114)||(16566306-16566390)
chr4 (19-114)||(19592232-19592327)
chr4 (18-114)||(43781520-43781615)
chr4 (18-114)||(48550428-48550524)
chr4 (18-114)||(51922929-51923025)
chr4 (27-114)||(13167523-13167610)
chr4 (15-114)||(29149308-29149407)
chr4 (21-114)||(14564147-14564240)
chr4 (18-114)||(15603349-15603445)
chr4 (18-114)||(48407699-48407794)
chr4 (27-114)||(25312713-25312800)
chr4 (27-114)||(54150524-54150611)
chr4 (22-111)||(26651852-26651941)
chr4 (50-114)||(15619635-15619699)
chr4 (18-114)||(30842121-30842216)
chr4 (31-114)||(6505203-6505286)
chr4 (15-114)||(26426116-26426214)
chr4 (31-114)||(46926050-46926133)
chr4 (48-114)||(33574197-33574263)
chr4 (28-114)||(39187733-39187819)
chr4 (18-111)||(31520375-31520467)
chr4 (21-114)||(38263891-38263984)
chr4 (17-106)||(56241844-56241933)
chr4 (22-114)||(9889336-9889427)
chr4 (18-114)||(9893700-9893796)
chr4 (18-114)||(14054840-14054936)
chr4 (18-114)||(14076004-14076099)
chr4 (27-114)||(19599497-19599583)
chr4 (51-114)||(41866176-41866239)
chr4 (36-114)||(55638756-55638834)
chr4 (18-114)||(28987010-28987103)
chr4 (18-114)||(32238060-32238155)
chr4 (50-114)||(48908295-48908358)
chr4 (18-114)||(54153034-54153129)
chr4 (18-114)||(54735652-54735747)
chr4 (15-114)||(48550203-48550302)
chr4 (31-101)||(2175161-2175231)
chr4 (18-114)||(13183051-13183147)
chr4 (18-114)||(14072492-14072587)
chr4 (50-103)||(38306032-38306085)
chr4 (54-103)||(54488630-54488679)
chr4 (50-114)||(54487221-54487285)
chr4 (48-102)||(33843801-33843855)
chr4 (50-103)||(22699763-22699816)
chr4 (50-103)||(22980714-22980767)
chr4 (50-103)||(22994301-22994354)
chr4 (49-114)||(36150624-36150689)
chr4 (29-114)||(45780011-45780095)
chr4 (50-114)||(16492948-16493012)
chr4 (50-114)||(53914920-53914983)
chr4 (53-102)||(28947762-28947811)
chr4 (50-103)||(39993574-39993627)
chr4 (53-114)||(46958047-46958108)
chr4 (53-114)||(53532001-53532062)
chr4 (18-114)||(38694037-38694133)
chr4 (51-114)||(523172-523235)
chr4 (21-104)||(30887165-30887247)
chr4 (50-101)||(38740316-38740367)
chr4 (30-109)||(8683034-8683115)
chr4 (27-89)||(8754156-8754217)
chr4 (33-86)||(17898085-17898138)
[»] chr8 (50 HSPs)
chr8 (18-114)||(3097207-3097303)
chr8 (15-114)||(40742133-40742232)
chr8 (18-114)||(3467545-3467641)
chr8 (18-114)||(25697961-25698056)
chr8 (18-114)||(6399109-6399205)
chr8 (19-114)||(42143365-42143460)
chr8 (18-114)||(4941782-4941878)
chr8 (18-114)||(44926853-44926948)
chr8 (28-111)||(22936797-22936880)
chr8 (20-114)||(26243138-26243232)
chr8 (21-114)||(440190-440283)
chr8 (19-112)||(8124984-8125076)
chr8 (19-103)||(28425484-28425568)
chr8 (31-114)||(25497717-25497799)
chr8 (18-101)||(42149017-42149100)
chr8 (28-106)||(43550913-43550991)
chr8 (57-114)||(30759306-30759363)
chr8 (27-114)||(15206717-15206804)
chr8 (19-114)||(38114458-38114552)
chr8 (27-114)||(41289059-41289146)
chr8 (18-111)||(38152179-38152271)
chr8 (18-114)||(24897589-24897684)
chr8 (18-114)||(27649758-27649853)
chr8 (21-114)||(33627035-33627128)
chr8 (15-114)||(36114042-36114140)
chr8 (50-103)||(31246327-31246380)
chr8 (18-114)||(40742296-40742390)
chr8 (45-114)||(36121546-36121614)
chr8 (50-101)||(19649230-19649281)
chr8 (55-101)||(10552923-10552969)
chr8 (50-103)||(26490977-26491030)
chr8 (27-96)||(34342873-34342941)
chr8 (50-109)||(32767481-32767538)
chr8 (49-109)||(39219764-39219824)
chr8 (31-101)||(1373064-1373134)
chr8 (49-103)||(36779434-36779488)
chr8 (53-103)||(42600968-42601018)
chr8 (50-114)||(30081652-30081715)
chr8 (30-114)||(35615733-35615817)
chr8 (46-114)||(37667059-37667126)
chr8 (26-114)||(40792205-40792292)
chr8 (27-102)||(37458312-37458386)
chr8 (15-114)||(45147251-45147350)
chr8 (52-114)||(2071569-2071630)
chr8 (80-114)||(30085640-30085674)
chr8 (77-114)||(3465441-3465478)
chr8 (48-109)||(27746231-27746292)
chr8 (50-103)||(33588764-33588817)
chr8 (50-114)||(23018140-23018204)
chr8 (51-103)||(38516343-38516395)
[»] chr6 (21 HSPs)
chr6 (18-114)||(10826095-10826191)
chr6 (15-114)||(16442351-16442450)
chr6 (18-114)||(13739210-13739305)
chr6 (18-114)||(13744710-13744805)
chr6 (21-114)||(33899006-33899099)
chr6 (18-114)||(29409252-29409348)
chr6 (30-104)||(16548155-16548229)
chr6 (55-114)||(17829999-17830058)
chr6 (18-114)||(6208064-6208159)
chr6 (27-114)||(21254880-21254966)
chr6 (27-112)||(1312442-1312527)
chr6 (18-114)||(31132468-31132563)
chr6 (51-114)||(699594-699656)
chr6 (26-114)||(5584050-5584137)
chr6 (50-109)||(29682203-29682262)
chr6 (50-115)||(882778-882843)
chr6 (29-114)||(21455897-21455980)
chr6 (33-101)||(10874222-10874290)
chr6 (77-114)||(15151506-15151543)
chr6 (33-101)||(1499975-1500043)
chr6 (54-114)||(16122002-16122062)
[»] chr5 (43 HSPs)
chr5 (18-114)||(39987965-39988061)
chr5 (20-114)||(8049049-8049143)
chr5 (18-111)||(41834910-41835003)
chr5 (30-114)||(22482219-22482303)
chr5 (18-114)||(32454555-32454650)
chr5 (15-114)||(3667869-3667968)
chr5 (27-114)||(32030741-32030828)
chr5 (18-114)||(9275482-9275578)
chr5 (18-114)||(10058092-10058188)
chr5 (18-114)||(13253081-13253176)
chr5 (18-114)||(27021147-27021242)
chr5 (18-114)||(40495356-40495452)
chr5 (15-114)||(40885225-40885325)
chr5 (15-114)||(35760204-35760303)
chr5 (15-114)||(40791068-40791166)
chr5 (15-114)||(42146323-42146421)
chr5 (18-111)||(7385933-7386026)
chr5 (28-111)||(4292177-4292260)
chr5 (12-115)||(16158462-16158565)
chr5 (21-111)||(3060225-3060314)
chr5 (18-114)||(2430295-2430390)
chr5 (18-114)||(7714958-7715054)
chr5 (51-114)||(24045881-24045944)
chr5 (15-112)||(5710386-5710482)
chr5 (18-85)||(28869530-28869597)
chr5 (50-102)||(2483724-2483776)
chr5 (18-114)||(41740591-41740687)
chr5 (27-114)||(7178805-7178891)
chr5 (27-114)||(23914252-23914339)
chr5 (50-103)||(22811076-22811129)
chr5 (18-114)||(33953900-33953995)
chr5 (55-114)||(34106945-34107004)
chr5 (51-102)||(19784864-19784915)
chr5 (28-114)||(20068942-20069028)
chr5 (49-114)||(24036622-24036687)
chr5 (51-103)||(2868362-2868414)
chr5 (50-114)||(33467990-33468054)
chr5 (27-114)||(2861668-2861754)
chr5 (62-103)||(4569089-4569130)
chr5 (54-103)||(5969956-5970005)
chr5 (77-114)||(35847888-35847925)
chr5 (70-114)||(16843599-16843643)
chr5 (21-101)||(41959482-41959561)
[»] chr2 (50 HSPs)
chr2 (18-114)||(9988500-9988596)
chr2 (18-114)||(2213660-2213756)
chr2 (18-114)||(7472673-7472768)
chr2 (30-114)||(1945038-1945122)
chr2 (18-114)||(31224693-31224789)
chr2 (18-114)||(28261307-28261403)
chr2 (15-114)||(2213516-2213615)
chr2 (18-109)||(26207933-26208024)
chr2 (18-114)||(27911419-27911515)
chr2 (15-111)||(28127289-28127385)
chr2 (18-114)||(39141469-39141564)
chr2 (18-114)||(44619060-44619156)
chr2 (31-114)||(7296181-7296264)
chr2 (18-114)||(42515975-42516070)
chr2 (30-109)||(5916246-5916324)
chr2 (15-114)||(32501996-32502094)
chr2 (30-109)||(36312302-36312380)
chr2 (18-105)||(42089536-42089627)
chr2 (45-114)||(2215292-2215361)
chr2 (53-114)||(30007552-30007613)
chr2 (37-114)||(36548231-36548308)
chr2 (50-114)||(34433305-34433369)
chr2 (50-114)||(41580709-41580773)
chr2 (50-114)||(45714667-45714731)
chr2 (27-114)||(25747881-25747967)
chr2 (45-111)||(38600445-38600511)
chr2 (18-114)||(14821176-14821271)
chr2 (18-101)||(16467099-16467182)
chr2 (53-107)||(28641690-28641744)
chr2 (18-114)||(7295347-7295441)
chr2 (50-114)||(3853945-3854009)
chr2 (50-114)||(8170358-8170421)
chr2 (15-114)||(31562686-31562782)
chr2 (31-114)||(23358284-23358367)
chr2 (37-114)||(8041311-8041387)
chr2 (50-103)||(23359940-23359993)
chr2 (50-109)||(30599908-30599967)
chr2 (48-111)||(34997238-34997301)
chr2 (29-104)||(39106678-39106753)
chr2 (50-114)||(18511147-18511211)
chr2 (51-102)||(10918649-10918700)
chr2 (50-101)||(12110919-12110970)
chr2 (50-101)||(23377549-23377600)
chr2 (30-104)||(43436290-43436364)
chr2 (31-101)||(3654794-3654865)
chr2 (77-114)||(23267363-23267400)
chr2 (50-103)||(26806265-26806318)
chr2 (27-87)||(11240693-11240753)
chr2 (54-90)||(25940264-25940300)
chr2 (49-101)||(42770408-42770460)
[»] chr1 (53 HSPs)
chr1 (18-114)||(42850221-42850317)
chr1 (18-114)||(31223402-31223498)
chr1 (18-114)||(43728880-43728975)
chr1 (18-114)||(48510936-48511032)
chr1 (18-114)||(4369805-4369900)
chr1 (30-114)||(20800279-20800363)
chr1 (30-114)||(35569204-35569288)
chr1 (27-114)||(47123423-47123510)
chr1 (28-114)||(1199865-1199951)
chr1 (18-114)||(7826356-7826452)
chr1 (50-114)||(15884287-15884351)
chr1 (21-114)||(11561853-11561946)
chr1 (15-112)||(13056023-13056119)
chr1 (18-114)||(5410668-5410763)
chr1 (18-114)||(6166138-6166233)
chr1 (18-114)||(12468240-12468336)
chr1 (22-114)||(36205223-36205315)
chr1 (54-114)||(49242984-49243044)
chr1 (15-114)||(11023332-11023430)
chr1 (18-114)||(12247448-12247543)
chr1 (18-102)||(40229484-40229568)
chr1 (18-113)||(25230035-25230129)
chr1 (15-112)||(50977344-50977440)
chr1 (18-114)||(45710077-45710172)
chr1 (18-101)||(13931651-13931733)
chr1 (27-114)||(50406167-50406254)
chr1 (20-104)||(291729-291813)
chr1 (18-94)||(9447561-9447636)
chr1 (50-114)||(10470650-10470713)
chr1 (30-114)||(27801654-27801738)
chr1 (27-114)||(23628708-23628794)
chr1 (27-114)||(34718488-34718575)
chr1 (50-103)||(4347034-4347087)
chr1 (30-114)||(26058281-26058365)
chr1 (18-114)||(35536100-35536195)
chr1 (27-102)||(25061263-25061338)
chr1 (55-114)||(47085898-47085957)
chr1 (49-102)||(40352450-40352503)
chr1 (18-114)||(6464636-6464731)
chr1 (26-114)||(15576490-15576578)
chr1 (21-88)||(11051339-11051406)
chr1 (50-101)||(29759711-29759762)
chr1 (50-101)||(43730059-43730110)
chr1 (53-103)||(13344836-13344886)
chr1 (76-114)||(43134536-43134574)
chr1 (51-109)||(47978368-47978426)
chr1 (50-114)||(6219968-6220032)
chr1 (54-101)||(32365143-32365190)
chr1 (53-103)||(5930823-5930873)
chr1 (54-103)||(41989-42038)
chr1 (77-114)||(29441271-29441308)
chr1 (50-103)||(40709236-40709288)
chr1 (50-114)||(16556295-16556358)
[»] chr3 (54 HSPs)
chr3 (18-114)||(10853268-10853364)
chr3 (18-114)||(21224994-21225090)
chr3 (21-114)||(50664765-50664858)
chr3 (18-114)||(38172308-38172404)
chr3 (18-114)||(44224766-44224862)
chr3 (18-113)||(20813150-20813245)
chr3 (15-112)||(15511379-15511475)
chr3 (18-114)||(3348247-3348343)
chr3 (18-114)||(52966810-52966906)
chr3 (22-114)||(53074911-53075002)
chr3 (15-114)||(26519665-26519764)
chr3 (15-114)||(31084209-31084307)
chr3 (50-114)||(23496353-23496417)
chr3 (35-111)||(38340827-38340902)
chr3 (18-114)||(42318334-42318429)
chr3 (27-114)||(4984594-4984681)
chr3 (19-114)||(10334143-10334238)
chr3 (45-114)||(19877448-19877517)
chr3 (18-114)||(8424731-8424826)
chr3 (18-114)||(53179852-53179948)
chr3 (15-114)||(35425335-35425433)
chr3 (27-114)||(42475722-42475809)
chr3 (18-114)||(38125443-38125538)
chr3 (17-114)||(35930741-35930838)
chr3 (27-111)||(34561121-34561205)
chr3 (18-101)||(23207082-23207164)
chr3 (15-114)||(30811533-30811631)
chr3 (18-104)||(16246105-16246191)
chr3 (21-114)||(25848039-25848132)
chr3 (18-114)||(44939417-44939511)
chr3 (50-114)||(48189443-48189506)
chr3 (62-114)||(55154549-55154601)
chr3 (27-114)||(30809946-30810033)
chr3 (50-103)||(7012676-7012729)
chr3 (17-114)||(29716687-29716784)
chr3 (26-114)||(14651103-14651190)
chr3 (38-102)||(40415309-40415373)
chr3 (41-114)||(22737041-22737114)
chr3 (53-101)||(10852727-10852775)
chr3 (49-101)||(42644297-42644349)
chr3 (50-114)||(49526670-49526734)
chr3 (53-103)||(23918881-23918931)
chr3 (18-72)||(31618930-31618984)
chr3 (62-103)||(30736172-30736213)
chr3 (50-103)||(44225601-44225654)
chr3 (50-101)||(21023229-21023280)
chr3 (18-101)||(32357515-32357597)
chr3 (50-101)||(52931586-52931637)
chr3 (51-105)||(30301199-30301253)
chr3 (52-90)||(38626750-38626788)
chr3 (50-103)||(25181246-25181299)
chr3 (77-114)||(52813278-52813315)
chr3 (27-103)||(45423781-45423856)
chr3 (48-100)||(49330378-49330430)
[»] scaffold0005 (1 HSPs)
scaffold0005 (21-114)||(253135-253228)
[»] scaffold0369 (1 HSPs)
scaffold0369 (18-114)||(8453-8549)
[»] scaffold0381 (1 HSPs)
scaffold0381 (22-114)||(9119-9210)
[»] scaffold0983 (1 HSPs)
scaffold0983 (19-114)||(2269-2364)
[»] scaffold0394 (1 HSPs)
scaffold0394 (63-114)||(5831-5882)
[»] scaffold0014 (1 HSPs)
scaffold0014 (27-114)||(118411-118498)
[»] scaffold0007 (1 HSPs)
scaffold0007 (45-111)||(29127-29192)
[»] scaffold0217 (1 HSPs)
scaffold0217 (31-114)||(2028-2111)
[»] scaffold0172 (1 HSPs)
scaffold0172 (50-101)||(15271-15322)
[»] scaffold0009 (1 HSPs)
scaffold0009 (53-103)||(199381-199431)
[»] scaffold0015 (1 HSPs)
scaffold0015 (49-101)||(65535-65587)
[»] scaffold0003 (1 HSPs)
scaffold0003 (51-114)||(301562-301625)
[»] scaffold0031 (1 HSPs)
scaffold0031 (53-101)||(99701-99749)


Alignment Details
Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 3622544 - 3622448
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3622544 atcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 3622448  T

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Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 48459744 - 48459831
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48459744 taagaatcacttttaagtaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 48459831  T

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Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 42740414 - 42740513
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  42740414 aatatcaacacataagaatcacttttaagtaagtatatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaa 42740513  T

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Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 37562595 - 37562691
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37562595 atcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaa 37562691  T

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Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 43631782 - 43631684
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  ||||||||||||||| |||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  43631782 aatatcaactcaaaagaatcacttttaattaagcatatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaa 43631684  T

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Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 3750738 - 3750807
Alignment:
Q  45 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3750738 aagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 3750807  T

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Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 3342815 - 3342911
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3342815 atcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaa 3342911  T

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Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 3375519 - 3375611
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||||||||||||| ||| |||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  3375519 actcataagaatcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaa 3375611  T

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Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 44967483 - 44967387
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44967483 atcaactcataagaatcacttctattaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 44967387  T

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Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 32205953 - 32206044
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||  |||||||||||| ||||||||    
T  32205953 aactcataagaatcacttttaagtaagtgtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattctttcaaactc 32206044  T

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Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 37639465 - 37639551
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||  |||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  37639465 aagaatcacttttaataaagtttctccaaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaa 37639551  T

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Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 12632167 - 12632075
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaac 110  Q
    |||||||| |||||||||||||||||  |||| |  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  12632167 atcaactcataagaatcacttttaagcgagtacactcaaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaac 12632075  T

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Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 386556 - 386469
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||  || ||||||||||||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||    
T  386556 taagaatcacttttcggttagtatatccaaacataaatcaattcacattcagctaacttttaaccaaaatcaatactctcaaactcaa 386469  T

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Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 47217612 - 47217529
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  |||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  47217612 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaa 47217529  T

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Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 10372032 - 10371946
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| |||  || | || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10372032 aagaatcacttctaataaactgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 10371946  T

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Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 39391221 - 39391136
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||| || |||||||||||| |||| |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39391221 atcaattcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattct 39391136  T

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Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 38230105 - 38230189
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  || | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    
T  38230105 gaatcacttttaataaaatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaa 38230189  T

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Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 43738019 - 43737927
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||||||||||| ||||| |||||||||| ||||||||||| ||| |||| |||||||| ||||||||||||||| ||||||||    
T  43738019 actcataagaatcacttttaaataagtttatccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaa 43737927  T

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Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 47021944 - 47022040
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||||||||||| | ||   |||| ||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  47021944 atcaattcgtaagaatcacatctagtaaagtgtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaa 47022040  T

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Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 34366065 - 34365972
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    |||||||| ||| |||||||||||| ||||  |||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  34366065 atcaactcataaaaatcacttttaa-taagcgtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactc 34365972  T

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Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 9456130 - 9456222
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| |||||| || || |||||||||||||||||||||||||||||| ||||    
T  9456130 atcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaatttacctcaaactcacttttaaccaaaatcaattctctcgaact 9456222  T

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Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 34010365 - 34010460
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||| ||||||||| | ||| ||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  34010365 atcaactcataagaaccacttttaaatgagtgtattcaaacataa-tcagttcatatccaactcacttttaaccaaaatcaattctttcaaactcaa 34010460  T

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Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 42904587 - 42904674
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||   ||| |||| ||||||||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||    
T  42904587 taagaatcacttttaaacgagtgtatcaaaacataaatcaattcacatctaactcatttttatccaaaaacaattctctcaaactcaa 42904674  T

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Target: chr7; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 46541634 - 46541721
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||  || | ||||  |||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  46541634 taagaatcacttttcggtgaatatactcaaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaa 46541721  T

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Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 24770982 - 24770902
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||||||  |  ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  24770982 aatcacttttagttttgtatatctaaatataaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaact 24770902  T

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Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 36920262 - 36920166
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||  ||||||||| ||||| |||   ||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||    
T  36920262 atcaactcaaaagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaa 36920166  T

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Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 37008434 - 37008351
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    |||||||| |||||||||||| |||| |||| | |||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  37008434 atcaactcataagaatcacttataagaaagtgtctccaaacataaatcaa-tcacctcaaactcacttttaaccaaaatcaattc 37008351  T

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Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 34011045 - 34010949
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcaca-tccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| | | | ||||||||||||| |||| ||| || ||||||| ||||||||||||||||| ||||||||||||    
T  34011045 atcaactcataagaatcacttttaagtgaatgtttccaaacataaattaatttacactcaaactcac-tttaaccaaaatcaattttctcaaactcaa 34010949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 39634217 - 39634164
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  39634217 tatccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattct 39634164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 42752243 - 42752190
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  42752243 tatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattct 42752190  T

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Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 41715694 - 41715778
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  41715694 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 41715778  T

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Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 48134605 - 48134700
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||  ||| ||||||||||||  |||| ||||||||||||| ||||||| | || ||| |||||||||| |||||||||||||||||||||||    
T  48134605 atcaacttataaaaatcacttttaaacaagtttatccaaacataa-tcaattctcctcaaacccacttttaacaaaaatcaattctctcaaactcaa 48134700  T

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Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 32186977 - 32187052
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctct 105  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  32186977 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctct 32187052  T

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Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 38494276 - 38494325
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||||    
T  38494276 ccaaacataaaccacttcacattcaactcacttttaaccaaaatcaattc 38494325  T

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Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 39977609 - 39977670
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||| ||||||||||||| ||| ||||||||||| || |||||||||||| |||||||    
T  39977609 tatccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaact 39977670  T

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Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 12964659 - 12964719
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||  |||| |||||||||| |||| |||||||||| ||||||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaa 12964719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 16079460 - 16079512
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||||| ||  ||| ||||||||||| ||||||||||||||||    
T  16079460 atccaaacataaatcacttttcattcaactcactttaaaccaaaatcaattct 16079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 20088929 - 20088977
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||| || || | ||||||||||||||||||||||||||    
T  20088929 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaatt 20088977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 4228604 - 4228655
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||||| ||  ||| |||||||||||||| |||||||||||    
T  4228604 tatccaaacataaatcacttttcattcaactcacttttaatcaaaatcaatt 4228655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 1766459 - 1766533
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||| || |   |||||||| ||||||||||| |  | |||||||||||||| |||||||||||    
T  1766459 taagaatcacttttatgttaaggtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatt 1766533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 33746423 - 33746497
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||  |||||| | | || ||||||| ||||||||| | || |||||||||||||| |||||||||||    
T  33746423 taagaatcacggttaagttaatgtaaccaaacaaaaatcaatttatattcaactcacttttaatcaaaatcaatt 33746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 19097474 - 19097518
Alignment:
Q  70 cacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| | ||||||||||| ||||||||||||| ||||||||||    
T  19097474 cacatctagctcacttttaatcaaaatcaattctttcaaactcaa 19097518  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 29829362 - 29829310
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||||||||| || |||| ||||||| ||||| ||| |||||||||    
T  29829362 tatccaaacataaatcactttacattcaactcatttttagccagaatcaattc 29829310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 6e-43; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 39636774 - 39636870
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39636774 atcaactcgtaagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaa 39636870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 42944995 - 42944899
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  42944995 atcaacacataagaatcacttttaagtaagtatatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 42944899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 43772220 - 43772124
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||| |||  |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43772220 atcaactcgtaagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 43772124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 49136511 - 49136607
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  49136511 atcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaa 49136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 49519716 - 49519815
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || ||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49519716 aatatcaattcataagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 49519815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 46830166 - 46830070
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  46830166 atcaactcataagaatcaattttaagaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaa 46830070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 4954148 - 4954052
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| ||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4954148 atcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaa 4954052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 6138717 - 6138621
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  6138717 atcaactcatatgaatcatttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaa 6138621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 16566306 - 16566390
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16566306 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 16566390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 19592327 - 19592232
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| ||||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  19592327 tcaattcgtaagaatcacttttagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaa 19592232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 43781615 - 43781520
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  43781615 atcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 43781520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 48550524 - 48550428
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  48550524 atcaactcataagaatcacttctattaaagtttatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaa 48550428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 51922929 - 51923025
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||| |||||||   |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  51922929 atcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaa 51923025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 13167523 - 13167610
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||| |  || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13167523 taagaatcacttttaaatgggtgtatccaaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 13167610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 29149407 - 29149308
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||  ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  29149407 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 29149308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 14564240 - 14564147
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| |||||||||||||||| | |   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  14564240 aactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaa 14564147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 15603349 - 15603445
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||| ||||||| ||||||||| ||||| ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  15603349 atcaactcataagaatcatttttaagcaagtatatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaa 15603445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 48407794 - 48407699
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  48407794 atcaactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 48407699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 25312713 - 25312800
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||  |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25312713 taagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 25312800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 54150524 - 54150611
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||||  |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  54150524 taagaatcatttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 54150611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 26651941 - 26651852
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||| ||||||| |||||||   |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26651941 actcataagaattacttttagtaaagtgtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaact 26651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 15619635 - 15619699
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15619635 tatccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaa 15619699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 30842121 - 30842216
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  30842121 atcaactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaa 30842216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 6505203 - 6505286
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  | ||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6505203 aatcacttttatatgagtgtatctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaa 6505286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 26426214 - 26426116
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  ||||||||||||||| ||||  ||||||||||||| |||||| | ||| ||||||||||||||||||||||||| ||||||||||||    
T  26426214 aatatcaactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaatttatatctaactcacttttaaccaaaatcaattttctcaaactcaa 26426116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 46926050 - 46926133
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  46926050 aatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaa 46926133  T

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Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 33574197 - 33574263
Alignment:
Q  48 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  33574197 tatattcaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaa 33574263  T

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Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 39187733 - 39187819
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| ||   |||| ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||    
T  39187733 aagaatcacttctagtaaagtgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaa 39187819  T

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Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 31520467 - 31520375
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||| ||| |||||||||||| |||| ||||| ||||||||||| ||||||| |||||||||||||||||||||| |||||| |||||||    
T  31520467 atcaactcataaaaatcacttttaa-taagcatatctaaacataaatccattcacacccaactcacttttaaccaaaattaattctttcaaact 31520375  T

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Target: chr4; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 38263891 - 38263984
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||| |||||||||| |||||| |||||| |||||| |||| ||||||||||||    
T  38263891 aactcataagtatcacttttaagtgagtatattcaaacataaattaattcacatcaaactcaattttaagcaaaattaattttctcaaactcaa 38263984  T

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Target: chr4; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 56241933 - 56241844
Alignment:
Q  17 tatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctc 106  Q
    ||||||||| |||||||||||||||  | | | |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  56241933 tatcaactcataagaatcacttttacattaatgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctc 56241844  T

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Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 9889427 - 9889336
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| ||||||||||||| |||| ||| |||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  9889427 actcataagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaa 9889336  T

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Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 9893700 - 9893796
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||| ||||  || |||||||||||| ||||||||| ||| ||||||||||| || |||||||||||||||||| ||||    
T  9893700 atcaactcataagaatcactttcaagtgggtgtatccaaacatatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaa 9893796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 14054840 - 14054936
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||| | || |||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||| || ||| |||||||| ||||||||||    
T  14054840 atcaacttgaaataatcacttttatataagtttatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaa 14054936  T

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Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 14076004 - 14076099
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| || |||||||||||||||||||  | | |||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||    
T  14076004 atcaattcataagaatcacttttaagtatatgtttccaaacataaatcaatttacatcaaactcac-tttaaccaaaatcaattttctcaaactcaa 14076099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 19599583 - 19599497
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||| |  ||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  19599583 taagaatcaattttaagtaattgcatccaaacataaatcaatt-acattcaactcacttttattcaaaatcaattctctcaaactcaa 19599497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 41866176 - 41866239
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  41866176 atccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaa 41866239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 55638834 - 55638756
Alignment:
Q  36 cttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||| ||||| |||| ||||||||||||||| ||||  |||||||||||||| |||||||||||||||||||||||    
T  55638834 cttttaaataagtgtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaa 55638756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 28987010 - 28987103
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||||||  |||| ||| ||| ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  28987010 atcaactcataaaaatcactt--aagtgagtgtattcaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 28987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 32238155 - 32238060
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || ||||||||| |||   ||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  32238155 atcaactcatatgaatcacttctaatatagtgtatccaaacataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaa 32238060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 48908295 - 48908358
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48908295 tatccaaacataac-caattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 48908358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 54153034 - 54153129
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| | |||||||||| ||   |||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  54153034 atcaactcatgagaatcacttctagtaaagtgtattcaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaa 54153129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 54735747 - 54735652
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||||  | | |||||||||||| ||||| ||||| ||||||  ||||||||||||||||| ||||||||||||    
T  54735747 atcaactcataagaatcacttttaagtatatgtttccaaacataaaccaatttacatcaaactca-atttaaccaaaatcaattttctcaaactcaa 54735652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 48550203 - 48550302
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || || |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  48550203 aatatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 48550302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 2175231 - 2175161
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||  |||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2175231 aatcacttttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 13183147 - 13183051
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||  ||| ||||| |||||| ||||| ||||||||||||||||||||||| |  ||||  ||||||||||||||||||| ||||| ||||||    
T  13183147 atcaacttataaaaatcatttttaaataagtgtatccaaacataaatcaattcaccttaaacttgcttttaaccaaaatcaattatctcagactcaa 13183051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 14072492 - 14072587
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| | |||||||||| ||   |||| ||||||||||||| |||||| || | |||||||||||||| ||||||||||||||||||||||||    
T  14072492 atcaactcattagaatcacttctattaaagtgtatccaaacataa-tcaatttaccttcaactcacttttaaacaaaatcaattctctcaaactcaa 14072587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 38306032 - 38306085
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  38306032 tatccaaacataaatcaattcgcattcaactcacttttaacaaaaatcaattct 38306085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 54488630 - 54488679
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  54488630 caaacataaatcaattcacattcaactcacttttaacaaaaatcaattct 54488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 54487285 - 54487221
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| |||| |||||||||||| | | ||||||||||| ||||||||||    
T  54487285 tatccaaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaa 54487221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 33843801 - 33843855
Alignment:
Q  48 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||||||||||| || |||||||||||||||||| ||| |||||||||    
T  33843801 tatatccaaacataaatcactttacatccaactcacttttagccagaatcaattc 33843855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 22699763 - 22699816
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  22699763 tatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22699816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 22980767 - 22980714
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  22980767 tatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22980714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 22994354 - 22994301
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||||||||||    
T  22994354 tatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22994301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 36150624 - 36150689
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||| || |||| |||||||||||||| ||||||||||| | ||||| ||||    
T  36150624 atatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaa 36150689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 45780095 - 45780011
Alignment:
Q  29 agaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||| | | |||| ||||| |||| |||||| | | ||||||||||| ||||||||||||| ||||||||||||    
T  45780095 agaatcacttttaagtgaatgtatctaaacaaaaattaattcataccaaactcactttttaccaaaatcaatt-tctcaaactcaa 45780011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 16492948 - 16493012
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||| ||||||||| |||||||||||||| |||| |||||| | ||||| ||||    
T  16492948 tatccaaacataaataaattcacattcaactcacttttaatcaaactcaattatttcaaaatcaa 16493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 53914920 - 53914983
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| |||| |||||||||||||  ||||||| ||||||| ||||||||    
T  53914920 tatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcgattctctgaaactcaa 53914983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 28947811 - 28947762
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    |||||||||||||| || || | |||||||||||||||||||||||||||    
T  28947811 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattc 28947762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 39993574 - 39993627
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||| ||||||||||||||||||||  |||||| |||||| |||||||||||||    
T  39993574 tatctaaacataaatcaattcacatttaactcatttttaatcaaaatcaattct 39993627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 46958047 - 46958108
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||| | || || | |||||||||||||||||||||||||||| ||||| ||||    
T  46958047 ccaaacataaattactttacgttcaactcacttttaaccaaaatcaattctatcaaaatcaa 46958108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 53532001 - 53532062
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| ||  | |||||||||||||||||||| |||||||||| | ||||||||||    
T  53532001 ccaaacataaaccacgttacatccaactcacttttaactaaaatcaattatgtcaaactcaa 53532062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 38694037 - 38694133
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| | |||||||||||||||||  ||| ||||||||||||||  ||||  ||  ||||| |||||||  ||||||||||||| | ||||||||    
T  38694037 atcaacccataagaatcacttttaagcgagtgtatccaaacataaactaatttgcactcaacttacttttagacaaaatcaattcttttaaactcaa 38694133  T

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Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 523172 - 523235
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||| ||  |||||||||||  |||||||||||| | |||| |||||    
T  523172 atccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaa 523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 30887247 - 30887165
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 104  Q
    ||||| |||||||||||||||  |  || ||||||||||||||||||||  |||| ||||||| |||||| ||||| |||||||    
T  30887247 aactcataagaatcacttttatattggtgtatccaaacataaatcaatt-tcatcaaactcacgtttaactaaaataaattctc 30887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 38740367 - 38740316
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||||| ||||  | ||||||||||||| ||||||||||||    
T  38740367 tatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 38740316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 8683115 - 8683034
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattc--acatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||||| || | | ||||||||||||||| |||||  ||||  |||||| ||||||||||| |||||| |||||||    
T  8683115 gaatcacttttatgttaatgtatccaaacataaattaattcttacattaaactcaattttaaccaaattcaattttctcaaa 8683034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 8754156 - 8754217
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaa 89  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| ||||||||||||||    
T  8754156 taagaatcaattttaggtgattgtatccaaacataaatcaatt-acattcaactcacttttaa 8754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 17898138 - 17898085
Alignment:
Q  33 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttt 86  Q
    |||||||||  ||| ||||||||||||||||||| || |||| |||||||||||    
T  17898138 tcacttttacctaaatatatccaaacataaatcactttacattcaactcacttt 17898085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 3097303 - 3097207
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3097303 atcaactcataagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaa 3097207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 40742133 - 40742232
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| ||||||||| |||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40742133 aatatcaactcataagaatcaattttattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 40742232  T

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Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 3467545 - 3467641
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| || |||||||||||||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3467545 atcaattcataagaatcacttttaaataaatatatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 3467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 25698056 - 25697961
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25698056 atcaactcataagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaa 25697961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 6399205 - 6399109
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  6399205 atcaactcataagaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaa 6399109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 42143460 - 42143365
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||    
T  42143460 tcaactcataagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaactaaaatcaattttctcaaactcaa 42143365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 4941878 - 4941782
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||| ||||||| ||| | ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  4941878 atcaactcataagaatcgcttttaaataattttatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaa 4941782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 44926853 - 44926948
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  44926853 atcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 44926948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 22936880 - 22936797
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22936880 aagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaact 22936797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 26243138 - 26243232
Alignment:
Q  20 caactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| ||||||||||||||||  || |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||    
T  26243138 caactcataagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaa 26243232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 440283 - 440190
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||||||| |||||| | | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  440283 aactcataagaatcatttttaactgaatgtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaa 440190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 8124984 - 8125076
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    ||||||| |||||||||||||||| | ||| ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  8124984 tcaactcctaagaatcacttttaaatgagtgtatccaaacataa-tcaattcacatcaaactcacttctaaccaaaatcaattctctcaaactc 8125076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 28425568 - 28425484
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||| |||||||||||| |||| |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  28425568 tcaactcataagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattct 28425484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 25497717 - 25497799
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  25497717 aatcacttttaaataagtgtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaa 25497799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 42149017 - 42149100
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||| || ||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  42149017 atcaactcatacgaatcacttttaaataagtctatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaatt 42149100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 43550913 - 43550991
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctc 106  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  43550913 aagaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattttctc 43550991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 30759363 - 30759306
Alignment:
Q  57 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 30759306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 15206717 - 15206804
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||| ||||| | | ||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||    
T  15206717 taagaatcacttctaagtcaatgtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttgtcaaactcaa 15206804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 38114458 - 38114552
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||| ||||||||||||  ||   ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38114458 tcaactcataagaatcacttgaaaccgagtgtatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaa 38114552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 41289146 - 41289059
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  41289146 taagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaa 41289059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 38152271 - 38152179
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||| ||||||||| |||||||||| ||| |||||||||||||||||| ||||| ||||||| |||||| |||||||||| |||||||||    
T  38152271 atcaactcataagaatcatttttaagtaaatatttccaaacataaatcaatttacatcaaactcac-tttaactaaaatcaattttctcaaact 38152179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 24897684 - 24897589
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||| |||||| ||| | ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||  ||||||||    
T  24897684 atcaactcataagaatcaattttaaataaatgtatccaaacataattca-ttcatatccaactcacttttaaccaaaatcaattctcataaactcaa 24897589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 27649758 - 27649853
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| | ||| |||| |||||||  |||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  27649758 atcaactcataagaatcacttttaaatgagtgtatctaaacatat-tcaattcatatccaaatcacttttaaccaaaatcaattctttcaaactcaa 27649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 33627128 - 33627035
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| |||||||||||||||   |||| |||||||||||||||||||||  |||||||||| ||||||  |||||||||||| ||||||||||    
T  33627128 aactcataagaatcacttttagtaaagtgtatccaaacataaatcaattcttatccaactcagttttaaataaaatcaattctttcaaactcaa 33627035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 36114140 - 36114042
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| ||||||||||||||||   ||| |||||||||||||  ||||  ||||| |||| |||||||| ||||||||||||||||||||||||    
T  36114140 aatatcaactcataagaatcacttttaaacgagtgtatccaaacataac-caatctacatcaaacttacttttaatcaaaatcaattctctcaaactcaa 36114042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 31246380 - 31246327
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  31246380 tatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattct 31246327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 40742390 - 40742296
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||  |  | ||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||| | ||||||||    
T  40742390 atcaactcataagaatcacttaca--ttagtgtatccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaa 40742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 36121614 - 36121546
Alignment:
Q  45 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||| || ||||||||    
T  36121614 aagtgtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaattcacttaaactcaa 36121546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 19649230 - 19649281
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  19649230 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  55 aaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 26490977 - 26491030
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||||||||    
T  26490977 tatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaattct 26491030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 34342941 - 34342873
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaat 96  Q
    |||||||||||||||| ||| | |||||||||| ||||||||||| || | |||||||||||||||||||    
T  34342941 taagaatcacttttaaataaatttatccaaacaaaaatcaattcatat-ctactcacttttaaccaaaat 34342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 32767481 - 32767538
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||||||| ||||||    
T  32767481 tatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaa 32767538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 39219764 - 39219824
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||||||||||| |||| ||  |||||||||||||| |||||||||||| |||||    
T  39219764 atatccaaacataaatcacttcatattaaactcacttttaacgaaaatcaattctatcaaa 39219824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 1373064 - 1373134
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||  |||| | ||||||||||||||||| ||||  | ||||||||||||| ||||||||||||    
T  1373064 aatcacttttttgtaattgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 1373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 36779434 - 36779488
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||||| | || |||| |||||||||||||| |||||||||||||    
T  36779434 atatccaaacataaattactttacattcaactcacttttaatcaaaatcaattct 36779488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 42600968 - 42601018
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  42600968 ccaaaaataaatcaattcacattcaactcactttgaacaaaaatcaattct 42601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 30081715 - 30081652
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||| |  |||||||||||||| |||||||||| || |||| ||||    
T  30081715 tatccaaacataaatcaattcac-tttaactcacttttaactaaaatcaattttcacaaaatcaa 30081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 35615733 - 35615817
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| |||||||| | | |||| |||||||||||||||| ||| |||||||||| |  |||||||||||  | ||||||||||    
T  35615733 gaatcaattttaagtgaatgtatctaaacataaatcaattcccattcaactcacttctttccaaaatcaatcttgtcaaactcaa 35615817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 37667126 - 37667059
Alignment:
Q  46 agtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||| ||||||||||||||||  |||| | ||||||| |||||||||||| ||||| ||||    
T  37667126 agtatatccaaatataaatcaattcacattaaactta-ttttaacgaaaatcaattctatcaaaatcaa 37667059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 40792292 - 40792205
Alignment:
Q  26 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||| || |||| ||||| |||| |||||||||||  ||| |||||||||||||| ||||||||||| | ||||| ||||    
T  40792292 gtaaaaatcacttctatgtaaatatattcaaatataaatcaattg-cattcaactcacttttaatcaaaatcaattatatcaaaatcaa 40792205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 37458386 - 37458312
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||||||| || | |||||||||||||||||||||| |  | |||| || |||| ||||||||||||||    
T  37458386 taagaatcacttttatgtcaatatatccaaacataaatcaatttagcttcaacaca-tttttaccaaaatcaattc 37458312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 45147350 - 45147251
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||  |||||||||||||||| | ||  | |||||||||||   ||||  ||| ||||||||||||||||||| || ||||| ||||| ||||    
T  45147350 aatatcaacttataagaatcacttttaaatgagagtgtccaaacataaccaaatttgcattcaactcacttttaaccaaattcgattctatcaaaatcaa 45147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 2071630 - 2071569
Alignment:
Q  52 tccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||| |||| |||||||||||||  ||||||||||||| ||||| ||||    
T  2071630 tccaaacatgaatcaatt-acattcaactcacttttagtcaaaatcaattctgtcaaaatcaa 2071569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 30085674 - 30085640
Alignment:
Q  80 tcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||||||| ||||||||    
T  30085674 tcacttttaaccaaaatcaattctcttaaactcaa 30085640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 3465478 - 3465441
Alignment:
Q  77 aactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  3465478 aactcacttctaaccaaaatcaattcactcaaactcaa 3465441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 27746292 - 27746231
Alignment:
Q  48 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    ||||||||||||||||||| ||||  ||||||| | ||| |||||||||||| ||| |||||    
T  27746292 tatatccaaacataaatcagttcaagtccaacttattttgaaccaaaatcaagtctatcaaa 27746231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 33588764 - 33588817
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||| | || ||||  ||||||||||||| |||||||||||||    
T  33588764 tatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct 33588817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 23018140 - 23018204
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||| |||| | |  |||||||||||| | ||||||||||||  ||||||||||    
T  23018140 tatccaaacataaataaatttatactcaactcacttttgatcaaaatcaattcgatcaaactcaa 23018204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 38516343 - 38516395
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||||| || |||| ||||||||| ||| | ||||||||||||    
T  38516343 atccaaacataaatcactttacattcaactcactattatcgaaaatcaattct 38516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 10826095 - 10826191
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  10826095 atcaactcataagaatcacttttaaataagtatatccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaa 10826191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 16442450 - 16442351
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||    
T  16442450 aatatcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaa 16442351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 13739210 - 13739305
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  13739210 atcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 13739305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 13744710 - 13744805
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  13744710 atcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 13744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 33899099 - 33899006
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| |||||||||||||||  | ||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  33899099 aactcataagaatcacttttacattagtgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaa 33899006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 29409348 - 29409252
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||| ||||||  || | |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  29409348 atcaactcataagaatcatttttaaaaaactgtatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaa 29409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 16548155 - 16548229
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 104  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16548155 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 16548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 17830058 - 17829999
Alignment:
Q  55 aaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17830058 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 17829999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 6208159 - 6208064
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||   |||| ||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| ||||    
T  6208159 atcaactcataagaatcacttttagtaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaa 6208064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 21254966 - 21254880
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||| |||| |||||||||||||||||||    
T  21254966 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaactcaa 21254880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 1312527 - 1312442
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    ||||||||| || ||||| | | ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||    
T  1312527 taagaatcaattctaagtcaatgtatccgaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactc 1312442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 31132468 - 31132563
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| | |||||||||||||||| ||||| |||||||| ||||   |||| |||||||||||| ||||| ||||||| |||| ||||||||||||    
T  31132468 atcaacccataagaatcacttttaaataagtgtatccaaaaataacg-aattaacatccaactcatttttagccaaaataaattatctcaaactcaa 31132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 699594 - 699656
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||  ||||||||||| |||||| |||||||||||| ||||||||||    
T  699594 atccaaacataaatcaattcttatccaactcac-tttaactaaaatcaattctttcaaactcaa 699656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 5584137 - 5584050
Alignment:
Q  26 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||| ||  ||| |||||||||||||||||||||| ||||  ||||||||||||  ||||||||||||| ||||| ||||    
T  5584137 gtaaaaatcacttctatataaatatatccaaacataaatcaatt-acattaaactcacttttagtcaaaatcaattctgtcaaaatcaa 5584050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 29682203 - 29682262
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||| ||||||||| |||  ||||||| |||||||||||||||||||| |||||    
T  29682203 tatccaaacacaaatcaatttacacgcaactcaattttaaccaaaatcaattctatcaaa 29682262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 882778 - 882843
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaaa 115  Q
    ||||||||||||||||| || || | ||||||| ||||||| | ||||||||| ||||||||||||    
T  882778 tatccaaacataaatcattttaccttcaactcaattttaactagaatcaattcactcaaactcaaa 882843  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 21455897 - 21455980
Alignment:
Q  29 agaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||| ||||| ||| |||||| || | | ||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  21455897 agaatcacttttaa-taagtgtatacaaacacaattga-ttcacatccaacttacttttaactaaaatcaattcttacaaactcaa 21455980  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 10874290 - 10874222
Alignment:
Q  33 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||  ||| |||||||||||||||| || ||||||| |||||||| |||| | ||||||||||    
T  10874290 tcacttttacctaaatatatccaaacataaaccacttcacattcaactcacatttacctaaaatcaatt 10874222  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 15151543 - 15151506
Alignment:
Q  77 aactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  15151543 aactcacttctaaccaaaatcaattcactcaaactcaa 15151506  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 1499975 - 1500043
Alignment:
Q  33 tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||  ||| | ||| |||||||||||||||| |||  |||||| |||||| ||||||||||||    
T  1499975 tcacttttacataaatgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaatt 1500043  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 16122062 - 16122002
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| ||||||| | |||  ||| |||||||||||||||||||||||| ||||| ||||    
T  16122062 caaacacaaatcaacttacactcaaatcacttttaaccaaaatcaattctatcaaaatcaa 16122002  T

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Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 39988061 - 39987965
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  39988061 atcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 39987965  T

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Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 8049143 - 8049049
Alignment:
Q  20 caactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  8049143 caactcataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 8049049  T

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Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 41834910 - 41835003
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||| ||||||||||||||| ||   |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41834910 atcaattcgtaagaatcacttctagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaact 41835003  T

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Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 22482219 - 22482303
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  22482219 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 22482303  T

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Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 32454555 - 32454650
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  32454555 atcaactcataagaatcacttttaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 32454650  T

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Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 3667869 - 3667968
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||  ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  3667869 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaa 3667968  T

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Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 32030741 - 32030828
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||| | |||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32030741 taagaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaa 32030828  T

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Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 9275578 - 9275482
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||| |||||   |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  9275578 atcaactcataagaatcaattttattaaagtgtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaa 9275482  T

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Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 10058092 - 10058188
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||||||||||||| ||   |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  10058092 atcaattcgtaagaatcacttctagtaaagtgtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaa 10058188  T

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Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 13253176 - 13253081
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| | ||| ||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  13253176 atcaactcataagaatcacttttaaatgagtgtatccaaacataa-tcaattcatattcaactcacttttaaccaaaatcaattctttcaaactcaa 13253081  T

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Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 27021147 - 27021242
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||  |||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||    
T  27021147 atcaacttctaagaatcacttttaagtgagtata-ccaaacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaa 27021242  T

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Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 40495452 - 40495356
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||||||||||  |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  40495452 atcaactcataaaaatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaa 40495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 40885225 - 40885325
Alignment:
Q  15 aatatcaactcgtaagaa-tcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactca 113  Q
    ||||||||||| ||| || ||||||||||  |||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  40885225 aatatcaactcataaaaactcacttttaaacaagtgtgtccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactca 40885324  T
Q  114 a 114  Q
    |    
T  40885325 a 40885325  T

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Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 35760204 - 35760303
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||  ||| ||||| |||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  35760204 aatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 35760303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 40791166 - 40791068
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  ||||||||||||||| ||||  ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  40791166 aatatcaactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaa 40791068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 42146323 - 42146421
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  ||||||||||||||| ||||  ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  42146323 aatatcaactcaaaagaatcacttttaattaagcgtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaa 42146421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 7386026 - 7385933
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||| |||||||||||||||| ||||| |||  |||||||||||||||||| || ||| ||||||||||||||||||||||||| |||||    
T  7386026 atcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaacccacttttaaccaaaatcaattctctaaaact 7385933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 111
Target Start/End: Original strand, 4292177 - 4292260
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| | |||||| |||||||||||||||||||||    
T  4292177 aagaatcacttctaattaagtgtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaact 4292260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 16158565 - 16158462
Alignment:
Q  12 aagaatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||| ||||| || ||||||||||||||||  ||||  ||||||| |||||| |||||||||| ||||||||||||| ||||||||||||| |||||||    
T  16158565 aagaacatcaattcctaagaatcacttttaaaaaagtgcatccaaatataaattaattcacatcaaactcacttttaatcaaaatcaattctttcaaact 16158466  T
Q  112 caaa 115  Q
    ||||    
T  16158465 caaa 16158462  T

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Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 3060314 - 3060225
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||||||    
T  3060314 aactcataagaatcacttt-aagtgagtatatccaaacataaattaattcatataaaactcacttttaatcaaaatcaattctctcaaact 3060225  T

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Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 2430390 - 2430295
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| ||||||||||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  2430390 atcaactcataagaatcacttctattgaagtgtatccaaacataa-tcaattcatgttcaactcacttttaaccaaaatcaattctctcaaactcaa 2430295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 7714958 - 7715054
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||  ||||||||| ||| |||| ||| | || ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  7714958 atcaacttataagaatcaatttcaagtgagtgtgtcaaaacatatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaa 7715054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 24045881 - 24045944
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  24045881 atccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaa 24045944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 5710482 - 5710386
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    |||||| |||| ||| |||||||| ||| ||||  |||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  5710482 aatatctactcataaaaatcacttgtaa-taagcgtatccaaacataaagcaattcacaccaaactcacttttaaccaaaatcaattctttcaaactc 5710386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 28869597 - 28869530
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcactt 85  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||    
T  28869597 atcaactcataagaatcacttttaagtaagtgtattcaaacataaatcaatccacatccaactaactt 28869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 2483776 - 2483724
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  2483776 tatccaaacataaatcaattcacattcaactcacttttaactaaaatcaattc 2483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 41740687 - 41740591
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||||||||||  |||| ||| |||||||||| |||||||  || ||||||| | ||| ||||||||||||||||||||||||    
T  41740687 atcaactcataacaatcacttttaaacaagtgtattcaaacataaaccaattcatctcaaactcacctataatcaaaatcaattctctcaaactcaa 41740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 7178805 - 7178891
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||  |||||| |||||||||||||||||    
T  7178805 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaattaattctctcaaactcaa 7178891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 23914339 - 23914252
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||| |  || ||||||||| |||||||||||| |||||||||| ||||||  | |||||||||||||||| ||||    
T  23914339 taagaatcacttttaaatgggtgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaa 23914252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 22811076 - 22811129
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  22811076 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 22811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 33953995 - 33953900
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| | |||||||||| ||   |||| ||||||||||||| |||||| || | ||||||||||||||  |||||||||||||||||||||||    
T  33953995 atcaactcatcagaatcacttctattaaagtgtatccaaacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaa 33953900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 34107004 - 34106945
Alignment:
Q  55 aaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  34107004 aaacattaatcaattcacatctaactcacttttaaccaaaaacaattcttttaaactcaa 34106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 19784864 - 19784915
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||||| || || |||| |||||||||||||||||||||||||||    
T  19784864 atccaaacataaaccactttacattcaactcacttttaaccaaaatcaattc 19784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 20068942 - 20069028
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||   | ||| ||||||||||||||| |||| | |  |||||||||||| ||||||||||||||  ||||||||||    
T  20068942 aagaatcacttttgcattagtgtatccaaacataaataaatttaaactcaactcacttttgaccaaaatcaattcgatcaaactcaa 20069028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 24036622 - 24036687
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| ||||||||||||| || |||| |||||||||||| | ||||||||||||| ||||| ||||    
T  24036622 atattcaaacataaatcattttacattcaactcacttttcatcaaaatcaattctatcaaaatcaa 24036687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 2868414 - 2868362
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||| ||||||| || |||| ||||||||||||||| ||||||||||||    
T  2868414 atccaaacttaaatcactttacattcaactcacttttaactaaaatcaattct 2868362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 33468054 - 33467990
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||| ||||||||  |||  ||||||||||||||||||||||| |||| ||||| ||||    
T  33468054 tatccaaacacaaatcaatatacactcaactcacttttaaccaaaatcagttctatcaaaatcaa 33467990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 2861668 - 2861754
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||  ||  |||||||||||||||||||||| |||| ||| ||| |||||||  ||||||||| | ||||| ||||    
T  2861668 taagaatcacttttacatat-tatatccaaacataaatcaatttacatgcaagtcatttttaactcaaatcaattatatcaaaatcaa 2861754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 4569130 - 4569089
Alignment:
Q  62 aatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||  |||||||||||||| |||||||||||||    
T  4569130 aatcaattcacactcaactcacttttaatcaaaatcaattct 4569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 5970005 - 5969956
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||| || |||| |||||||||| || ||||||||||||||    
T  5970005 caaacataaatcactttacattcaactcacttatatccaaaatcaattct 5969956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 35847925 - 35847888
Alignment:
Q  77 aactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  35847925 aactcacttctaaccaaaatcaattcactcaaactcaa 35847888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 16843599 - 16843643
Alignment:
Q  70 cacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||||| ||||  ||||||||||    
T  16843599 cacatccaattcacttttaaccaaaatctattcgttcaaactcaa 16843643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 41959482 - 41959561
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||| ||||||||||||||| ||  || | ||||||||||||| ||||||| |  |||||||||||||| ||||| ||||    
T  41959482 aactcataagaatcacttttatgtg-gtgtttccaaacataaattaattcacttttaactcacttttaactaaaattaatt 41959561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 9988596 - 9988500
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9988596 atcaactcatatgaatcacttttaaataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaa 9988500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 2213660 - 2213756
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2213660 atcaactcataagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 2213756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 7472768 - 7472673
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7472768 atcaactcataagaatcacttttaaataagtgtatccaaacataa-tcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 7472673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 1945122 - 1945038
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1945122 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 1945038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 31224693 - 31224789
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||   || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  31224693 atcaactcataagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaa 31224789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 28261307 - 28261403
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| || || ||  |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28261307 atcaactcataagaatcacttctatgtgagagtatccaaatataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaa 28261403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 2213516 - 2213615
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||  ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  2213516 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 2213615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 26208024 - 26207933
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    ||||||| |||||||||| |||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  26208024 atcaacttgtaagaatcaattttaattaagtgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaa 26207933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 27911419 - 27911515
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||| | || |||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||    
T  27911419 atcaacttgaaataatcacttttaaatgagtatatccaaacataaatcaattcacatcaaactcacttttaaccaaactcaattctatcaaaatcaa 27911515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 28127385 - 28127289
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||||||||  ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  28127385 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaact 28127289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 39141564 - 39141469
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||| |||||| | ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  39141564 atcaactcataagaatcatttttaaatgagtgtatccaaacataa-tcaattcatatccaactcacttttaaccaaaatcaattctttcaaactcaa 39141469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 44619156 - 44619060
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||| ||||||  |||| ||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||    
T  44619156 atcaactcataataatcatttttaaacaagtgtatccaaacataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaa 44619060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 7296181 - 7296264
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  | ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  7296181 aatcacttttatatgagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaa 7296264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 42516070 - 42515975
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||| |||| | | ||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  42516070 atcaactcgaaagaatcattttttaatgagtatattcaaacataa-tcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaa 42515975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 5916324 - 5916246
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5916324 gaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 5916246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 32501996 - 32502094
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||| ||| |||||||| | | | ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  32501996 aatatcaactcgtaaaaattacttttaattgaatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaa 32502094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 36312302 - 36312380
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  36312302 gaatcacttttaataaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 36312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 42089627 - 42089536
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatc----caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctct 105  Q
    |||||||| |||||||||||||||| ||||| ||||    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  42089627 atcaactcataagaatcacttttaaataagtgtatctatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctct 42089536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 2215292 - 2215361
Alignment:
Q  45 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  2215292 aagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaa 2215361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 30007613 - 30007552
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  30007613 ccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaa 30007552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 36548231 - 36548308
Alignment:
Q  37 ttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||  ||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  36548231 ttttaagtgagagtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaa 36548308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 34433369 - 34433305
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  34433369 tatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaa 34433305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 41580773 - 41580709
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  41580773 tatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 41580709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 45714731 - 45714667
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  45714731 tatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaa 45714667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 25747967 - 25747881
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  25747967 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttaatcaaaatcaattctctcaaactcaa 25747881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 38600511 - 38600445
Alignment:
Q  45 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  38600511 aagtgtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaact 38600445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 14821176 - 14821271
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| ||||||||||||| |||||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  14821176 atcaactcataagaatcacttctagtaaagtgtatccaaacataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaa 14821271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 16467099 - 16467182
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||| | |||||||||||||||  | |  ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  16467099 atcaacccataagaatcacttttacattatcatatccaaacataaatcaatttacatctaactcacttttaaccaaaatcaatt 16467182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 28641690 - 28641744
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctca 107  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28641690 ccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctctca 28641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 7295441 - 7295347
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| | | |||||||||||  || || |||||||||||||||||||| || || |||||| ||||||||| |||||||||||||||||||||    
T  7295441 atcaactcatgataatcactttta--tatgtgtatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaa 7295347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 3853945 - 3854009
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||| ||||    
T  3853945 tatccaaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaa 3854009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 8170358 - 8170421
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  8170358 tatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaa 8170421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 31562782 - 31562686
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||| ||||||||||||||||   ||| |  |||||||||| ||||||||| || || |||||||||||||||||||||||||||||||||||    
T  31562782 aatataaactcataagaatcacttttaaacgagtgt--ccaaacataa-tcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaa 31562686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 23358284 - 23358367
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||  |||| ||||||||||||||  | ||||  || ||||||||||||| ||||||||||||||||||||||||    
T  23358284 aatcacttttaaacaagtgtatccaaacataaactatttcatctcaaactcacttttaatcaaaatcaattctctcaaactcaa 23358367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 8041311 - 8041387
Alignment:
Q  37 ttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||| |  ||||||||||||||||||| |||| ||| |||||||||  ||||||||||||||||||||||||    
T  8041311 ttttaagtaattgcatccaaacataaatcaatt-acattcaattcacttttattcaaaatcaattctctcaaactcaa 8041387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 23359993 - 23359940
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  23359993 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 23359940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 30599967 - 30599908
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||||||||||| |||||    
T  30599967 tatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattctatcaaa 30599908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 34997301 - 34997238
Alignment:
Q  48 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| | |||||||    
T  34997301 tatattcaaacataaatcaattcacatccaattcatttttaacaaaaatcaattttgtcaaact 34997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 39106753 - 39106678
Alignment:
Q  29 agaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 104  Q
    |||||||||||||||| | | ||||||||||| || ||||| | ||| ||||||||||| ||||||||||||||||    
T  39106753 agaatcacttttaagtgaatgtatccaaacattaaacaatttatatcaaactcactttttaccaaaatcaattctc 39106678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 18511147 - 18511211
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| ||||  || |||||||||||||||||||||| | ||||| ||||    
T  18511147 tatccaaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaa 18511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 10918649 - 10918700
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    |||||||||||||||| || |||| ||||||||||||| |||||||||||||    
T  10918649 atccaaacataaatcactttacattcaactcacttttatccaaaatcaattc 10918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 12110919 - 12110970
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||||| || | || ||||||||||||||||||||||||||    
T  12110919 tatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt 12110970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 23377549 - 23377600
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||| ||||    
T  23377549 tatccaaacataaatcaacttacattcaactcacttttaaccaaaattaatt 23377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 43436364 - 43436290
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 104  Q
    |||| |||||||| | |||  ||| ||||||||||||||| ||||| || |||||||||| ||||||||||||||    
T  43436364 gaattacttttaaatgagtgcatcaaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctc 43436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 3654865 - 3654794
Alignment:
Q  31 aatcacttttaagtaagtatatccaaa-cataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||| |||| | |||||||| ||||| ||| | ||||| ||||||||||||||| ||||||||||    
T  3654865 aatcacttttatgtaactctatccaaaacataagtcactgcacattcaactcacttttaactaaaatcaatt 3654794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 23267400 - 23267363
Alignment:
Q  77 aactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  23267400 aactcacttctaaccaaaatcaattcactcaaactcaa 23267363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 26806318 - 26806265
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| ||  ||  |||||||||||||| |||||||||||||    
T  26806318 tatccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattct 26806265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 11240693 - 11240753
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcactttt 87  Q
    ||||||||| || ||||| | | ||| ||||||||||||||||||||| |||||| |||||    
T  11240693 taagaatcaattctaagtgaatgtattcaaacataaatcaattcacattcaactcgctttt 11240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 25940300 - 25940264
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaac 90  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  25940300 caaatataaatcaattcacatcaaactcacttttaac 25940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 42770460 - 42770408
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||| |||||||  ||| |||||||||||||| |||||| ||||    
T  42770460 atatccaaacatagatcaattttcattcaactcacttttaatcaaaatgaatt 42770408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 42850317 - 42850221
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  42850317 atcaactcataagaatcacttttaaggaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaa 42850221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 31223402 - 31223498
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31223402 atcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 31223498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 43728975 - 43728880
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43728975 atcaactcataagaatcacttttaaataagtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaa 43728880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 48510936 - 48511032
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  48510936 atcaattcataagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaa 48511032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 4369900 - 4369805
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| ||  || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  4369900 atcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacat-caactcacttttaaccaaaatcaattctctcaaaatcaa 4369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 20800363 - 20800279
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  20800363 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 20800279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 35569288 - 35569204
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  35569288 gaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaa 35569204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 47123423 - 47123510
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||  |||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  47123423 taagaatcacttttaacgaagtgtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 47123510  T

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Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 1199865 - 1199951
Alignment:
Q  28 aagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  1199865 aagaatcacttctaataaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaa 1199951  T

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Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 7826452 - 7826356
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| || |||||||||||||||||| ||  || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  7826452 atcaattcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaa 7826356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 15884287 - 15884351
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15884287 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaa 15884351  T

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Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 11561853 - 11561946
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||||||||||||||   ||||||| |||| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  11561853 aactcataagaatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaa 11561946  T

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Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 13056023 - 13056119
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    ||||||||||| ||| |||||||||||| ||||  ||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||    
T  13056023 aatatcaactcataaaaatcacttttaa-taagcgtattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactc 13056119  T

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Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 5410668 - 5410763
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| || ||||||||||||||||||| || ||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||    
T  5410668 atcaagtcataagaatcacttttaagta-gtgtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaa 5410763  T

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Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 6166138 - 6166233
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||| | ||| ||||||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||||| ||||    
T  6166138 atcaactcctaagaatcacttttaaatgagtgtatccaaacataa-tcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaa 6166233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 12468240 - 12468336
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||||||||||  |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  12468240 atcaactcataaaaatcacttttaaaaaagtgtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaa 12468336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 36205223 - 36205315
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||| ||||| ||||||| || ||| ||||||| ||| ||| ||||||||| ||||||||||||||||||||||||    
T  36205223 actcgtaagaatcacttttaaataagtttatccaatcaaaaaccaattcatatctaacccacttttaatcaaaatcaattctctcaaactcaa 36205315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 49243044 - 49242984
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49243044 caaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaa 49242984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 11023430 - 11023332
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||| ||| |||||||| | | | ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  11023430 aatatcaactcgtaaaaattacttttaattgaatgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaa 11023332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 12247448 - 12247543
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||||||||||  |||| ||||||||||||| | |||| |||||||||||||||||||||| |||||||||||| ||||||||    
T  12247448 atcaactcataaaaatcacttttaaacaagtgtatccaaacataatt-aatttacatccaactcacttttaaccagaatcaattctcttaaactcaa 12247543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 40229568 - 40229484
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||  ||||||||| | |||| |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  40229568 atcaactcagaagaatcacctgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattc 40229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 25230035 - 25230129
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactca 113  Q
    |||||||  |||||||||||| ||   |||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  25230035 atcaactaataagaatcacttctattaaagtgtatccaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactca 25230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 50977440 - 50977344
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    |||||| |||| ||| |||||||| ||| ||||  |||||||||||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  50977440 aatatctactcataaaaatcacttgtaa-taagcgtatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactc 50977344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 45710077 - 45710172
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| ||| ||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||    
T  45710077 atcaactcataagaatcacttctagtaaagtgtattcaaacataa-tcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaa 45710172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 13931651 - 13931733
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||| ||||||||||  ||||||| ||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||    
T  13931651 atcaacttgtaagaatcatgtttaagtgagtatatccaaacat-aatcaattcacatcaaactcatttttaaacaaaatcaatt 13931733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 50406167 - 50406254
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||||  ||||  ||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||| ||||||||||    
T  50406167 taagaatcatttttaacgaagtgcatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaaatctttcaaactcaa 50406254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 291813 - 291729
Alignment:
Q  20 caactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 104  Q
    |||||| ||| ||||||||||||  |||| |||||||||||||| |||||||  || ||||||||||||| ||||||||||||||    
T  291813 caactcataacaatcacttttaaacaagtgtatccaaacataaaccaattcatctcaaactcacttttaatcaaaatcaattctc 291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 9447561 - 9447636
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaa 94  Q
    ||||||||| ||||||||||||||| | |||||||| |||||| |||| ||||||||| ||||||||||||||||||    
T  9447561 atcaactcgaaagaatcacttttaaatgagtatatctaaacat-aatccattcacatcaaactcacttttaaccaaa 9447636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 10470650 - 10470713
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  10470650 tatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaa 10470713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 27801738 - 27801654
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  27801738 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 27801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 23628794 - 23628708
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||| || | | |||||||||||||||||||| |||| |||||||||||||  ||||||||||| ||||||||||||    
T  23628794 taagaatcaattttaggttattgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcaattatctcaaactcaa 23628708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 34718488 - 34718575
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||    |||| ||| |||||||||||||||| | ||| |||||||||||||||||||| |||| ||||||||||||    
T  34718488 taagaatcacttttgtacaagtgtattcaaacataaatcaatttatatcaaactcacttttaaccaaaattaattatctcaaactcaa 34718575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 4347034 - 4347087
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  4347034 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 4347087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 26058281 - 26058365
Alignment:
Q  30 gaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||| | |||  ||||||||||||||||||| ||||| || |||||||||| ||||||||||||||| ||| ||||    
T  26058281 gaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaa 26058365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 35536100 - 35536195
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||||||   ||| |||| ||||||||  |||||||| || || |||||||||| |||||| |||||||||||||||||    
T  35536100 atcaactcataagaatcacttttaaacgagtgtatctaaacataac-caattcacgtcaaagtcacttttaatcaaaattaattctctcaaactcaa 35536195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 25061263 - 25061338
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    ||||||||||||||| || |   |||||||||||||||||||| |  | |||||||||||||||||||||||||||    
T  25061263 taagaatcacttttatgttaaggtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattc 25061338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 47085898 - 47085957
Alignment:
Q  55 aaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| ||||| ||||    
T  47085898 aaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaaatcaa 47085957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 40352450 - 40352503
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    |||||||||||||||||| || ||||  ||||||||||||||||||||||||||    
T  40352450 atatccaaacataaatcactttacattaaactcacttttaaccaaaatcaattc 40352503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 6464636 - 6464731
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| |||  |||||||| |||||||||||  |||||||||||||||||||| || || |||||||||||    
T  6464636 atcaactcataagaatcacttctagtaaagtgtataaaaacataa-tcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaa 6464731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 15576490 - 15576578
Alignment:
Q  26 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||||||| |  ||| ||| ||||||||| ||||| | ||| |||||||||||||  |||||||||||||| ||||||||    
T  15576490 gtaaaaatcacttttaattttgtaaatcaaaacataaaacaattaatatctaactcacttttaattaaaatcaattctcttaaactcaa 15576578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 11051406 - 11051339
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcactttta 88  Q
    ||||| |||||| || ||||||||  || ||| |||||||||||||||||||||| ||||||||||||    
T  11051406 aactcttaagaaccatttttaagtgtgtgtattcaaacataaatcaattcacatcaaactcactttta 11051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 29759711 - 29759762
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||||| || |||| ||||||||||||||||| ||||||||    
T  29759711 tatccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 43730110 - 43730059
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||||||||||    
T  43730110 tatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaatt 43730059  T

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Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 13344836 - 13344886
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||| || || | ||||||||||||||||||||||||||||    
T  13344836 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 13344886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 43134536 - 43134574
Alignment:
Q  76 caactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43134536 caactcacttttaaccaaaatcaattctcttaaactcaa 43134574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 47978426 - 47978368
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaa 109  Q
    |||||| ||||||||| || |||| ||||||||||||| ||||||||||||| ||||||    
T  47978426 atccaaccataaatcactttacattcaactcacttttacccaaaatcaattcactcaaa 47978368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 6220032 - 6219968
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  ||||||| | ||||||| ||||||||| ||||||||||| | ||||||||||    
T  6220032 tatccaaacatgtatcaatttaaatccaacacacttttaatcaaaatcaattatatcaaactcaa 6219968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 32365143 - 32365190
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||||| |||| |||||||||||| || ||||||||||    
T  32365143 caaacataaatcaatttacattcaactcacttttgactaaaatcaatt 32365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 5930823 - 5930873
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||| || |||| ||| | ||||||||||||||||||||||    
T  5930823 ccaaacataaatcactttacattcaatttacttttaaccaaaatcaattct 5930873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 41989 - 42038
Alignment:
Q  54 caaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||||| | |||||||| ||| || ||||||||||||    
T  41989 caaacataaatcaattcacgttcaactcaccttttactaaaatcaattct 42038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 29441271 - 29441308
Alignment:
Q  77 aactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  29441271 aactcacttctaaccaaaatcaattcactcaaactcaa 29441308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 40709236 - 40709288
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||||||||| |||  ||||||||| |||| |||||||||||||    
T  40709236 tatccaaacataaatcaatt-acactcaactcactattaatcaaaatcaattct 40709288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 16556295 - 16556358
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||| ||||  || || |||||||||||||||||||||| | ||||| ||||    
T  16556295 tatccaaacataaatcacttcatctc-aattcacttttaaccaaaatcaattatgtcaaattcaa 16556358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 10853364 - 10853268
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||    
T  10853364 atcaactcataagaatcacttttaagtgagtatatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaa 10853268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 21224994 - 21225090
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||| |||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  21224994 atcaactcgtaagaatcgcttttaagaaagtgtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaa 21225090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 50664765 - 50664858
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| |||||||||||| |||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50664765 aactcttaagaatcacttctaagtgtgtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 50664858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 38172404 - 38172308
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38172404 atcaactcataagaatcacttctattaaagtgtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaa 38172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 44224766 - 44224862
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||||||||||    
T  44224766 atcaactcataagaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaa 44224862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 20813150 - 20813245
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactca 113  Q
    |||||||| |||||||||||||| | |||||||||||||||| ||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  20813150 atcaactcataagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactcacttttaaccaaacacaattctctcaaactca 20813245  T

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Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 15511475 - 15511379
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactc 112  Q
    ||||||||||| ||| |||||||||||| ||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15511475 aatatcaactcataaaaatcacttttaa-taagcgtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactc 15511379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 3348247 - 3348343
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||||||    
T  3348247 atcaactcataagaattacttttaaggaagtgtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaa 3348343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 52966906 - 52966810
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||||||||| ||  || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  52966906 atcaactcataagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaa 52966810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 53074911 - 53075002
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||||||||||||| ||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  53074911 actcataagaatcacttttaagtgagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 53075002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 26519665 - 26519764
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||  ||| |||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  26519665 aatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaa 26519764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 31084209 - 31084307
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||    
T  31084209 aatatcaagtcataagaatcacttttaag-aagtgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaa 31084307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 23496353 - 23496417
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23496353 tatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 23496417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 38340827 - 38340902
Alignment:
Q  35 acttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  38340827 acttttaa-taagcatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaact 38340902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 42318334 - 42318429
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  42318334 atcaactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 42318429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 4984594 - 4984681
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||    
T  4984594 taagaatcacttttaaacgagtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaa 4984681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 10334143 - 10334238
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||| ||||||| |||||||   |||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  10334143 tcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaactgacttttaaccaaaatcaattctctcaaactcaa 10334238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 19877448 - 19877517
Alignment:
Q  45 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  19877448 aagtatatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaa 19877517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 8424826 - 8424731
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| ||   |||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  8424826 atcaactcataagaatcacttctattgaagtgtatccaaacataa-tcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaa 8424731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 53179852 - 53179948
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||||||||||  |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| | | ||||||||    
T  53179852 atcaactcataaaaatcacttttaaaaaagtgtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaa 53179948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 35425335 - 35425433
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||| |||||||||||| |    |||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  35425335 aatatcaactcataagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaa 35425433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 42475722 - 42475809
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||  |||| ||| |||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42475722 taagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaa 42475809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 38125538 - 38125443
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||| ||||||||| || ||| ||||||||||||||||||||||||||||| ||||    
T  38125538 atcaactcataagaatcactttcaaacaagtgtatccaaacataa-tcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaa 38125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 35930741 - 35930838
Alignment:
Q  17 tatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| ||||||| |||| ||  | ||| ||||||| |||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||    
T  35930741 tatcaactcataagaatgacttatacattagtgtatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaa 35930838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 34561121 - 34561205
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    ||||||||| || ||||| | | ||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||    
T  34561121 taagaatcaattctaagtcaatgtatccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaact 34561205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 23207164 - 23207082
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||| ||| |||||||| |||  |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  23207164 atcaactcataa-aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaatt 23207082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 30811631 - 30811533
Alignment:
Q  15 aatatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| || |||||||||||| |    |||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  30811631 aatatcaagtcataagaatcacttctgttaaagtgtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaa 30811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 16246191 - 16246105
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctc 104  Q
    |||||||| |||||||||||| ||   |||| | |||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  16246191 atcaactcctaagaatcacttctattaaagtgtttccaaacataaatcaatttacatctaactcacttttaactaaaatcaattctc 16246105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 25848039 - 25848132
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| ||||||||| |||||||| |   |||||||||||||||||||||| ||  ||||||||||| |||||||| |||| ||||||||||||    
T  25848039 aactcataagaatcatttttaagtgaaggtatccaaacataaatcaattcatattaaactcactttttaccaaaattaattttctcaaactcaa 25848132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 44939511 - 44939417
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| |||||||||||| || |||| | ||||||||||||| |||||||| || |||||||||||||| |||||||||||| |||||| ||||    
T  44939511 atcaactcataagaatcacttata-gtaaatgtatccaaacataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaa 44939417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 48189506 - 48189443
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  48189506 tatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaa 48189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 55154549 - 55154601
Alignment:
Q  62 aatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  55154549 aatcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaa 55154601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 30810033 - 30809946
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||||  ||  ||| |||||||||||||||||  |||||||||||||||||| |||||| | ||||| ||||    
T  30810033 taagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactcacttttaaccaaactcaattttatcaaaatcaa 30809946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 7012676 - 7012729
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  7012676 tatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 7012729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 29716784 - 29716687
Alignment:
Q  17 tatcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| || |||||||||||||||| |||   | || | | ||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||||    
T  29716784 tatcaattcataagaatcacttttaattaaacgtgtctataaataaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaa 29716687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 14651190 - 14651103
Alignment:
Q  26 gtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| |||||||| || ||||||||||| ||||| ||||||||| | || |||||||||||||| ||||||||||||| ||||| ||||    
T  14651190 gtaaaaatcacttctatgtaagtatatcaaaacacaaatcaatt-atattcaactcacttttaatcaaaatcaattctatcaaaatcaa 14651103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 40415373 - 40415309
Alignment:
Q  38 tttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattc 102  Q
    |||||||  |||||||||||||||||| |||| |||||||||||||||||||| |||||| ||||    
T  40415373 tttaagtgggtatatccaaacataaattaatttacatccaactcacttttaactaaaatcgattc 40415309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 22737041 - 22737114
Alignment:
Q  41 aagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| ||| || ||||||||||||||| |||| | ||| |||||||||||||||||||| | ||||||||||    
T  22737041 aagtaaatatgtctaaacataaatcaatttacattctacttacttttaaccaaaatcaattttttcaaactcaa 22737114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 10852775 - 10852727
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||||    
T  10852775 ccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 42644297 - 42644349
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||||||| || |||| ||||||||||||||| ||||||||||    
T  42644297 atatccaaacataaatcactttacattcaactcacttttaactaaaatcaatt 42644349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 49526734 - 49526670
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||||||||| |||  ||| |||||||||| ||||||||||||| ||||| ||||    
T  49526734 tatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaatcaa 49526670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 23918881 - 23918931
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||| || |||| ||||||||||||||||||||| ||||||    
T  23918881 ccaaacataaatcactttacattcaactcacttttaaccaaaattaattct 23918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 31618984 - 31618930
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcac 72  Q
    |||||||| |||||||||||| ||||| ||  |||||||||||||||||||||||    
T  31618984 atcaactcataagaatcacttctaagtgagagtatccaaacataaatcaattcac 31618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 30736172 - 30736213
Alignment:
Q  62 aatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  30736172 aatcaattcacatacaactcacttttaactaaaatcaattct 30736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 44225601 - 44225654
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||||| || ||||  |||||||||||||| ||||||||||||    
T  44225601 tatccaaacataaatcactttacattaaactcacttttaacgaaaatcaattct 44225654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 21023280 - 21023229
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||| |||||||||||| |||| || |||||||| |||||||||||||||||    
T  21023280 tatctaaacataaatcacttcaaattcaactcacatttaaccaaaatcaatt 21023229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 32357515 - 32357597
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||| | |||||||||||||||| | ||| | | |||||||||||||||| ||||| || |||| || ||||||||||||||    
T  32357515 atcaacacataagaatcacttttaaatgagtgttttcaaacataaatcaatttacatcaaattcac-ttcaaccaaaatcaatt 32357597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 52931637 - 52931586
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||||||||| |||   |||||||||||||| ||||||||||    
T  52931637 tatccaaacataaatcaatttacactaaactcacttttaactaaaatcaatt 52931586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 30301253 - 30301199
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctct 105  Q
    |||||||||||| ||| |  |||| |||||||||||||| |||||||||||||||    
T  30301253 atccaaacataattcactatacattcaactcacttttaatcaaaatcaattctct 30301199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Original strand, 38626750 - 38626788
Alignment:
Q  52 tccaaacataaatcaattcacatccaactcacttttaac 90  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  38626750 tccaaacataaatcatttcacattcaactcacttttaac 38626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 25181246 - 25181299
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    ||||||||||||||| | || ||||  ||||||||||||| |||||||||||||    
T  25181246 tatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct 25181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 52813278 - 52813315
Alignment:
Q  77 aactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  52813278 aactcacttctaaccaaaatcaattcactcaaactcaa 52813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 45423856 - 45423781
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||||  | | |||||||||||||||| ||||| |  | |||||||||||||  |||||||||||||    
T  45423856 taagaatcacttttactttaatatatccaaacataaaccaatt-aagttcaactcacttttaggcaaaatcaattct 45423781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 49330430 - 49330378
Alignment:
Q  48 tatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaat 100  Q
    ||||||||||||||| | | ||||| | ||||| |||||||||||||||||||    
T  49330430 tatatccaaacataatttagttcactttcaactaacttttaaccaaaatcaat 49330378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 114
Target Start/End: Original strand, 253135 - 253228
Alignment:
Q  21 aactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||| |||||||||||||||| | |   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  253135 aactcataagaatcacttttaactgaaggtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaa 253228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 8453 - 8549
Alignment:
Q  18 atcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||| ||| ||||| ||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  8453 atcaactcataaaaatcatttttaaaaaagtgtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaa 8549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 9119 - 9210
Alignment:
Q  22 actcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||| ||||||||||||| |||| ||| |||||||||||| | ||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  9119 actcataagaatcactttcaagtgagtgtatccaaacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaa 9210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 2364 - 2269
Alignment:
Q  19 tcaactcgtaagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||| |||| || |||||||||  |||| | ||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||||    
T  2364 tcaacttgtaaaaaccacttttaaacaagtgtgtccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaa 2269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 5882 - 5831
Alignment:
Q  63 atcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5882 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 5831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 118498 - 118411
Alignment:
Q  27 taagaatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    ||||||||||||||    |||| |||||||||||||||||||| ||||| |||||||||||||| |||||| ||||| ||||||||||    
T  118498 taagaatcacttttgtacaagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaa 118411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 29192 - 29127
Alignment:
Q  45 aagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaact 111  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  29192 aagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctttcaaact 29127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 2111 - 2028
Alignment:
Q  31 aatcacttttaagtaagtatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||  | |||  ||||||||||||||||||||| ||| |||||| ||| |||||||||||||||| ||||||||||    
T  2111 aatcacttttatatgagtgcatccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaa 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 15322 - 15271
Alignment:
Q  50 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    ||||||||||||||||| || | || ||||||||||||||||||||||||||    
T  15322 tatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt 15271  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 199431 - 199381
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattct 103  Q
    |||||||||||||| || || | ||||||||||||||||||||||||||||    
T  199431 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 199381  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 65535 - 65587
Alignment:
Q  49 atatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||||||||| || ||||  |||||| ||||||||||||||||||    
T  65535 atatccaaacataaatcactttacattaaactcatttttaaccaaaatcaatt 65587  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 301562 - 301625
Alignment:
Q  51 atccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaa 114  Q
    |||||||||||||| |||| | |  |||||||||||| ||||||||||||||  ||||||||||    
T  301562 atccaaacataaataaatttatactcaactcacttttgaccaaaatcaattcgatcaaactcaa 301625  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 99701 - 99749
Alignment:
Q  53 ccaaacataaatcaattcacatccaactcacttttaaccaaaatcaatt 101  Q
    |||||||||||| |||| |||| ||||||||||||||  ||||||||||    
T  99701 ccaaacataaattaatttacattcaactcacttttaattaaaatcaatt 99749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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