View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20362_low_33 (Length: 292)
Name: NF20362_low_33
Description: NF20362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20362_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 6491594 - 6491853
Alignment:
| Q |
18 |
agaccatacatcaaaagtaatttctattcacaccttatcgtgctcgagaatttgtttggtaagtatactagttcttttattttgtttctatttgcataaa |
117 |
Q |
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| T |
6491594 |
agaccatacatcaaaagtaatttctattcacaccttatcgtgctcgagattttgtttggtaagtatactagttcttttattttgtttctatttgcataaa |
6491693 |
T |
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| Q |
118 |
caaccttagccctatgaaaactcgtaatttaaaattaatttcagactaatgtttctagctatggaactccaaattcactgagcaaaattgttagaatttg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
6491694 |
caaccttagccctatgaaaactcgtaatttaaaattaatttcagactaatgtttctagcaatggaactccaaattcactgagcaaaattgttagaatttg |
6491793 |
T |
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| Q |
218 |
atagctatgataatcaagctcacattcacttttgttgaaataacagtccagggcaagatt |
277 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
6491794 |
atagctatgataatcaagctcacattcacttttgtttaaataacagtccagggcaagatt |
6491853 |
T |
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