View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20362_low_37 (Length: 286)
Name: NF20362_low_37
Description: NF20362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20362_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 2283129 - 2282889
Alignment:
| Q |
18 |
gtttagtgatgtagagatgtaacttaccatcaatgagtgattgggagacatggaaggtggaacataagagcagggacagaaacaagaagacattcatggt |
117 |
Q |
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| T |
2283129 |
gtttagtgatgtagagatgtaacttaccatcaatgagtgattgggagacatggaaggtggaacataagagcagggacagaaacaagaagacattcatggt |
2283030 |
T |
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| Q |
118 |
ggttgagctatgaaagttactgctcttcattcaagtttgagaggaggatatggtatggggaaagaagaaggcgcgagaatgaaatggacttagcaagcaa |
217 |
Q |
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| T |
2283029 |
ggttgagctatgaaagttactactcttcattcaagtttgagaagaggatatggtatggggaaagaagaaggcgcgagaatgaaatggacttagcaagcaa |
2282930 |
T |
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| Q |
218 |
tgttacagggtacaggatgggcatgtccttatatgcatgct |
258 |
Q |
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| T |
2282929 |
tgttacagggtacaggatgggcatgtccttatatgcatgct |
2282889 |
T |
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