View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20364_high_15 (Length: 269)
Name: NF20364_high_15
Description: NF20364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20364_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 43360301 - 43360064
Alignment:
| Q |
15 |
tattcttgcactccatcatactgtattggactaattcattcatctcctctcccccaaagcatgaactcagtgcattgctttcttaggcctctcagctcca |
114 |
Q |
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| T |
43360301 |
tattcttgcactccatcataatgtattggactaattcattcatctcctctaccc-aaagcatgaactcagtgcattgctttcttaggcctctcagctcca |
43360203 |
T |
|
| Q |
115 |
acttccaacttataatatagtacagtcggtgcctttattattacttactattaacatcaattcaagaattaattgagagaaccttttttattgcacttga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43360202 |
acttccaacttataatatagtacagtcggtgcctttattattacttactattaacatcaattcaagaattaattgagagaaccttttttattgcacttga |
43360103 |
T |
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| Q |
215 |
acagttccaagccaaaaccctatttttcttccaaggaac |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
43360102 |
acagttccaagccaaaaccctatttttcttccaaggaac |
43360064 |
T |
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