View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20364_low_19 (Length: 242)
Name: NF20364_low_19
Description: NF20364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20364_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 33991637 - 33991857
Alignment:
| Q |
1 |
ctctattcatgaagctannnnnnnnagttgttcggagttggcccaagggtactgacacttgctatgagcctctaacccactccgctcaactcctacatag |
100 |
Q |
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| T |
33991637 |
ctctattcatgaagctattttttttagttgttcggagttggcccaagggtactgacacttgctatgagcctctaacccactccgctcaactcctacatag |
33991736 |
T |
|
| Q |
101 |
ctcacctccgttaagagtctcatattggaggagatctagtctgaaaaagtgttgtgagagacatctctcaccttataagtcgatttcgtagggttatcgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
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| T |
33991737 |
ctcacctccgttaagagtctcatattggaggagatctagtctgaaaaagtgttgtgagagacatctctcaccttataagtcgattttgtagggttgtcgt |
33991836 |
T |
|
| Q |
201 |
tcatgttccagacagggaccc |
221 |
Q |
| |
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||||||||||||||||||||| |
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|
| T |
33991837 |
tcatgttccagacagggaccc |
33991857 |
T |
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