View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20365_high_12 (Length: 430)
Name: NF20365_high_12
Description: NF20365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20365_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 18 - 420
Target Start/End: Original strand, 283670 - 284072
Alignment:
| Q |
18 |
caattagtgttgttggtaactacctacctgaacatcaccagttcttattgtacccttgtggccagcaaaatcttgatgagttatacctccctgaattcaa |
117 |
Q |
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| T |
283670 |
caattagtgttgttggtaactacctacctgaacatcaccagttcttattgtacccttgtggccagcaaaatcttgatgagttatacctccctgaattcaa |
283769 |
T |
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| Q |
118 |
gcaatgtcaaactttttaggcaaataaaatgacaataataaaccaatgttgaaagtaaaataaaacttagacatcattaaagtgctgacacagacaccga |
217 |
Q |
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| T |
283770 |
gcaatgtcaaactttttaggcaaataaaatgacaataataaaccaatgttgaaagtaaaataaaacttagacatcattaaagtgctgacacagacaccga |
283869 |
T |
|
| Q |
218 |
catcagacacaaagtacatatagattttcgtaataatttaaagaaaataaattaactacatataattaaatgtgtcggtatcatgttgaacattggaaac |
317 |
Q |
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| T |
283870 |
catcagacacaaagtacatatagattttcgtaataatttaaagaaaataaattaactacatataattaaatgtgtcggtatcatgttgaacatcggaaac |
283969 |
T |
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| Q |
318 |
acggaagtgtggtacaaagatggtcaatatacatagatacatacctctagcatgtaggtgactgtctcaaaacctgcaaaagagatatgcaaatcaagat |
417 |
Q |
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| T |
283970 |
acggaagtgtggtacaaagatggtcaatatacatagatacatacctctagcatgtaggtgactgtctcaaaacctgcaaaagagatatgcaaatcaagat |
284069 |
T |
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| Q |
418 |
att |
420 |
Q |
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| T |
284070 |
att |
284072 |
T |
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