View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20365_high_4 (Length: 577)
Name: NF20365_high_4
Description: NF20365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20365_high_4 |
 |  |
|
| [»] scaffold0012 (1 HSPs) |
 |  |  |
|
| [»] scaffold0437 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 292; Significance: 1e-164; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 48 - 419
Target Start/End: Complemental strand, 1065222 - 1064851
Alignment:
| Q |
48 |
ttgttcatgaacgtgcatcaactgctagaaacattcaattttagaagctgaacctccaaatctttatttcttgatcattctcgtaaacaccttcagactt |
147 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1065222 |
ttgttcatgaacgtgcatcaaccgctagaaacattcaattttagaagctgcacctccaaatctttatttcttgatcattctcgtaaaccccttcagactt |
1065123 |
T |
 |
| Q |
148 |
attccgtgtttctttctttcgacacaagtcctaccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggt |
247 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
1065122 |
attccgcgtttctttctttctacacaagtcctgccatggcttttgattggcaatcagaattggcttccacggggaaacctccttctccctccactgtggt |
1065023 |
T |
 |
| Q |
248 |
tgcactccccacaaacagcaatccaccaaaagaagcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggtt |
347 |
Q |
| |
|
|||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
1065022 |
tgcactccccacaaacagtaatccaccaaaaaaatcatttgcacaggctcttgttgcagcaaccgtgacaaacacatctacaccgttactaactccggtt |
1064923 |
T |
 |
| Q |
348 |
atccgtggtgaaacactatgcatccctatatctgatgagacctacacacgaggaattgatggtagcaagaga |
419 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |
|
|
| T |
1064922 |
atccgtggtgaaacgctatgcatccctatatctgatgagacctacacacaaggaattgatgcttgcaagaga |
1064851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 423 - 569
Target Start/End: Complemental strand, 1053106 - 1052961
Alignment:
| Q |
423 |
tttcggggcagactcatcttaagtaagggcgacaaaccctattgatcacaggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttgga |
522 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
1053106 |
tttcggggcagactcatcttaagtaagggcgacaaaccctattgatcacgggaggttcaa-caaagcttcaacaactttggacgaatgttgggccatgga |
1053008 |
T |
 |
| Q |
523 |
atatgacgccactgggaaaagggtattttgaattctatttttcttct |
569 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1053007 |
agatgacgccactgggaaaagggtattttgaattctatttttcttct |
1052961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 168 - 568
Target Start/End: Complemental strand, 26594221 - 26593822
Alignment:
| Q |
168 |
gacacaagtcctaccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagca |
267 |
Q |
| |
|
|||||||| ||| ||||||||||||| ||| |||| |||||||||||||||||||| || ||||||||| ||||||||||||||||||| |||||||| | |
|
|
| T |
26594221 |
gacacaagccctgccatggcttttgattggaaatctgaattggcttccacgggaaa-cctccttctccctccactgtggttgcactcccaacaaacagta |
26594123 |
T |
 |
| Q |
268 |
atccaccaaaagaagcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatg |
367 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||| ||| | |||||| ||||||| |||||||||||||| |||||||| |||||||||| ||||| |
|
|
| T |
26594122 |
atccaccaaaaaaatcatttgcacaggctcttgttgtcgcaactgtgacagacacatcgacaccgttaccaacttcggttatctgtggtgaaacgctatg |
26594023 |
T |
 |
| Q |
368 |
catccctatatctgatgagacctacacacgaggaattgatggtagcaagagatattttcggggcagactcatcttaagtaagggcgacaaaccctattga |
467 |
Q |
| |
|
||||| ||||||||||||||||||| ||| |||||| |||| | | |||||| | || ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
26594022 |
catccttatatctgatgagacctacgcacaaggaatcgatgcttgaaagagaaacttacggggcagactcatcttaagtaagggcgacaaaccctatgga |
26593923 |
T |
 |
| Q |
468 |
tcacaggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgccactgggaaaagggtattttgaattctatttttctt |
567 |
Q |
| |
|
|||| ||||||||| ||||| ||||| |||||||||||||| |||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
26593922 |
tcacgggaggttcacacaaagcttcagcaactttggacgaacgttgggccatggaaaatgacgccattgggaaaggggtattttgaattctatttttctt |
26593823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 172 - 568
Target Start/End: Original strand, 25821616 - 25822012
Alignment:
| Q |
172 |
caagtcctaccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagcaatcc |
271 |
Q |
| |
|
|||| ||| ||||||||||||| |||||||||||||||| ||||||| ||||| ||| ||||| |||| |||| ||| ||| |||||||| | || || |
|
|
| T |
25821616 |
caagccctgccatggcttttgattggcaatcagaattggtgtccacggtgaaacctcctcctccctccaccgtggctgctctctccacaaactgtaaccc |
25821715 |
T |
 |
| Q |
272 |
accaaaagaagcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatgcatc |
371 |
Q |
| |
|
||||||| || ||||||| |||||| | ||||| ||| |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
25821716 |
accaaaaaaatcatttgctcaggctttggttgctgcaaccgtgacagacacttctccaccgttaccaactccggttatccgtggggaaactctctgcatt |
25821815 |
T |
 |
| Q |
372 |
cctatatctgatgagacctacacacgaggaattgatggtagcaagagatattttcggggcagactcatcttaagtaagggcgacaaaccctattgatcac |
471 |
Q |
| |
|
||||| ||||||||||| || || |||||| |||| | | || ||| |||| |||| | | || || ||||| ||||| ||||| |||||| ||| | |
|
|
| T |
25821816 |
cctatttctgatgagacttatgaacaaggaatagatgcttgtaaaagaaatttacgggaccgtctaattttaagcaagggagacaagccctatggattcc |
25821915 |
T |
 |
| Q |
472 |
aggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgccactgggaaaagggtattttgaattctatttttcttc |
568 |
Q |
| |
|
|||||||| ||||| ||| | |||||||||| ||| ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |
|
|
| T |
25821916 |
gtgaggttcagacaaagctttagcaactttggaagaacgttggcccatggaagatgacgccactaggaaatgggtattttgaattctacttttcttc |
25822012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 181 - 568
Target Start/End: Original strand, 16169320 - 16169707
Alignment:
| Q |
181 |
ccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagcaatccaccaaaaga |
280 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||||| ||||| ||| ||||| |||| |||| ||| ||| ||||||| | || ||||||||| |
|
|
| T |
16169320 |
ccatggcttttgattggcaatcagaattggcgtccacggtgaaacctcctcctccctccaccgtggctgctctctccacaaattgtaacccaccaaaaat |
16169419 |
T |
 |
| Q |
281 |
agcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatgcatccctatatct |
380 |
Q |
| |
|
| ||||| |||||| | ||||| ||| | | |||| || | ||| |||||||||||||||||||||||||||| ||||| || ||||| ||||| ||| |
|
|
| T |
16169420 |
attgtttgctcaggctttggttgctgcaactgcgacagacgcttctccaccgttaccaactccggttatccgtggggaaactctctgcattcctatttct |
16169519 |
T |
 |
| Q |
381 |
gatgagacctacacacgaggaattgatggtagcaagagatattttcggggcagactcatcttaagtaagggcgacaaaccctattgatcacaggaggttc |
480 |
Q |
| |
|
|||||||| || || |||||| |||| | | || | | |||| |||||| | || || ||||| ||||| ||||| |||||| ||| | ||||||| |
|
|
| T |
16169520 |
gatgagacttatgaacaaggaatagatgcttgtaaaataaatttacggggccgtctaattttaagcaagggagacaagccctatggattccgtgaggttc |
16169619 |
T |
 |
| Q |
481 |
aaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgccactgggaaaagggtattttgaattctatttttcttc |
568 |
Q |
| |
|
| ||||| ||||| |||||||||| ||| ||||| || ||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |
|
|
| T |
16169620 |
agacaaagcttcagcaactttggaagaacgttggcccatggaagatgacgccactaggaaaggggtattttgaattctacttttcttc |
16169707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 330 - 565
Target Start/End: Original strand, 14639419 - 14639654
Alignment:
| Q |
330 |
ccgttaccaactccggttatccgtggtgaaacactatgcatccctatatctgatgagacctacacacgaggaattgatggtagcaagagatattttcggg |
429 |
Q |
| |
|
||||||||||| ||| ||||||||||||||| || ||||| ||||| |||||||||| ||| || |||||| ||| | | || ||| |||| |||| |
|
|
| T |
14639419 |
ccgttaccaacaccgaatatccgtggtgaaactctctgcattcctatttctgatgagagctatgaacaaggaatatatgcttgtaaaagaaatttacggg |
14639518 |
T |
 |
| Q |
430 |
gcagactcatcttaagtaagggcgacaaaccctattgatcacaggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttggaatatgac |
529 |
Q |
| |
|
| |||| || ||||| ||||| ||||| |||||| ||| | || |||| ||||| ||||| |||||||||| || |||||| || ||| | ||||| |
|
|
| T |
14639519 |
gtcgactaattttaagcaagggagacaagccctatggattccgtgaagttcggacaaagcttcagcaactttggaagagtgttggcccatggtagatgac |
14639618 |
T |
 |
| Q |
530 |
gccactgggaaaagggtattttgaattctatttttc |
565 |
Q |
| |
|
|||||| || || ||||| ||||||||||| ||||| |
|
|
| T |
14639619 |
gccactaggcaatgggtactttgaattctacttttc |
14639654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 14639270 - 14639350
Alignment:
| Q |
181 |
ccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaa |
261 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||||| ||||| || ||||| |||| |||| ||| ||| |||||| |
|
|
| T |
14639270 |
ccatggcttttgattggcaatccgaattggcgtccacggtgaaaccttctcctccccccaccgtggctgctctctccacaa |
14639350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 176; Significance: 2e-94; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 169 - 568
Target Start/End: Original strand, 50472 - 50871
Alignment:
| Q |
169 |
acacaagtcctaccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagcaa |
268 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| | ||| ||| | | |
|
|
| T |
50472 |
acacaagccctgccatggcttttgattggcaatcagaattggcttccacggtgaaacctccttctccctccaccgtggttgcacactccaaaaattgtac |
50571 |
T |
 |
| Q |
269 |
tccaccaaaagaagcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatgc |
368 |
Q |
| |
|
||||||||| || | | |||||||||| | ||||| ||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
50572 |
cccaccaaaaaaatcgtatgcacaggctttggttgctgcaaccgtgacagacacatcttcaccgttaccatctccggttatccgtggtgaaacgctatgt |
50671 |
T |
 |
| Q |
369 |
atccctatatctgatgagacctacacacgaggaattgatggtagcaagagatattttcggggcagactcatcttaagtaagggcgacaaaccctattgat |
468 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||||||| | |||||||| |||| |||||| ||||||| ||||| |||||||| || |||||| ||| |
|
|
| T |
50672 |
atccctatttctgatgagacctacgaacaaggaattgatgcttgcaagagaaatttacggggccgactcatattaagcaagggcgataagccctatggat |
50771 |
T |
 |
| Q |
469 |
cacaggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgccactgggaaaagggtattttgaattctatttttcttc |
568 |
Q |
| |
|
| ||||||||| ||||| ||||| |||||||||| ||| |||||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||||||| |
|
|
| T |
50772 |
tccgggaggttcagacaaagcttcagcaactttggaagaacgttgggccatggaagatgacgccactaggaaaggggtattttgaattttatttttcttc |
50871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 169 - 568
Target Start/End: Complemental strand, 12631843 - 12631445
Alignment:
| Q |
169 |
acacaagtcctaccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagcaa |
268 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| | |||||||| | | |
|
|
| T |
12631843 |
acacaagccctgccatggcttttgattggcaatcagaattggcttccacggtgaaacctccttctccctccaccgtggttgcacactccacaaactgtac |
12631744 |
T |
 |
| Q |
269 |
tccaccaaaagaagcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatgc |
368 |
Q |
| |
|
||||||||| || | ||||||| |||| | ||||| ||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
12631743 |
cccaccaaaaaaatcgtttgcacgggctttggttgctgcaaccgtgacagacacatcttcaccgttaccatctccggttatccgtggtgaaacgctatgt |
12631644 |
T |
 |
| Q |
369 |
atccctatatctgatgagacctacacacgaggaattgatggtagcaagagatattttcggggcagactcatcttaagtaagggcgacaaaccctattgat |
468 |
Q |
| |
|
|||||||| | |||||||| ||||| || ||||||||||| | |||||| | |||| ||||| || |||| ||||| |||||||| || |||||| ||| |
|
|
| T |
12631643 |
atccctatttatgatgagagctacaaacaaggaattgatgcttgcaagaaaaatttatggggccgattcatattaagcaagggcgataagccctatggat |
12631544 |
T |
 |
| Q |
469 |
cacaggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgccactgggaaaagggtattttgaattctatttttcttc |
568 |
Q |
| |
|
| ||||||||| ||||| ||||| |||||||||| |||||||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||||| |
|
|
| T |
12631543 |
tccgggaggttcagacaaagcttcagcaactttggaagaatgttgggccatggaagataacgccactaggaaaggggtattttgaatt-tatttttcttc |
12631445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 181 - 568
Target Start/End: Original strand, 26655803 - 26656190
Alignment:
| Q |
181 |
ccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagcaatccaccaaaaga |
280 |
Q |
| |
|
|||||| |||||| | ||||||||||||||||||||| | ||||| || |||||| |||| |||||||||||| | | ||||| |||||||| ||| | |
|
|
| T |
26655803 |
ccatggattttgattcgcaatcagaattggcttccactgtgaaacctccctctccctccaccgtggttgcactctcaaataacagtaatccaccgaaaaa |
26655902 |
T |
 |
| Q |
281 |
agcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatgcatccctatatct |
380 |
Q |
| |
|
| ||||||| || ||||||| || | |||||||| |||||||| |||| |||||||||||| |||||||||| | || ||||||||||| || ||| |
|
|
| T |
26655903 |
atcatttgctcaagctcttgcagctacgaccgtgacagacacatctacaccattaccaactccgattatccgtggcaagacgctatgcatcccaatctct |
26656002 |
T |
 |
| Q |
381 |
gatgagacctacacacgaggaattgatggtagcaagagatattttcggggcagactcatcttaagtaagggcgacaaaccctattgatcacaggaggttc |
480 |
Q |
| |
|
|| |||||||| ||| |||||||| | | ||||| || | | || |||||||||||||| | ||| || |||||||||||| |||| |||||| | |
|
|
| T |
26656003 |
gacgagacctatgcacagggaattgaggcttgcaagcgaaacctccgtggcagactcatcttgaataaaggagacaaaccctatggatcgagggaggtac |
26656102 |
T |
 |
| Q |
481 |
aaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgccactgggaaaagggtattttgaattctatttttcttc |
568 |
Q |
| |
|
| ||||| ||||||||||||||||| || |||| || ||||| ||||||||||||||||| || || || || |||||||||||||| |
|
|
| T |
26656103 |
agacaaagcttcaacaactttggacaaacattggcccatggaagatgacgccactgggaaagggctacttcgagttctatttttcttc |
26656190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 172 - 388
Target Start/End: Original strand, 27515740 - 27515956
Alignment:
| Q |
172 |
caagtcctaccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaacagcaatcc |
271 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||||||||||| ||||||| ||||| ||| ||||| |||| |||| ||| ||| |||||||| | || || |
|
|
| T |
27515740 |
caagccctgccatggcttttgattggcaatcagaattggcgtccacggtgaaacctcctcctccctccaccgtggctgctctctccacaaactgtaaccc |
27515839 |
T |
 |
| Q |
272 |
accaaaagaagcatttgcacaggctcttgttgcagcatccgtgacaaacacatctgcaccgttaccaactccggttatccgtggtgaaacactatgcatc |
371 |
Q |
| |
|
||||||| || | |||| |||||| | ||||| ||| ||| |||| |||| ||| |||||||||||||||||||||||||||| ||||| || ||||| |
|
|
| T |
27515840 |
accaaaaaaatcgtttgatcaggctttggttgctgcaaccgcgacagacacttctccaccgttaccaactccggttatccgtggggaaactctctgcatt |
27515939 |
T |
 |
| Q |
372 |
cctatatctgatgagac |
388 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
27515940 |
tctatttctgatgagac |
27515956 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 11317679 - 11317597
Alignment:
| Q |
181 |
ccatggcttttgactggcaatcagaattggcttccacgggaaaaccgccttctcccaccactgtggttgcactccccacaaac |
263 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||| |||| |||||||||| | |||||||| |
|
|
| T |
11317679 |
ccatggcttttgattggcaatcagaattggcttccacggtgaaacctcctcctccctccaccgtggttgcacactccacaaac |
11317597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0437 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0437
Description:
Target: scaffold0437; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 332 - 565
Target Start/End: Original strand, 6099 - 6330
Alignment:
| Q |
332 |
gttaccaactccggttatccgtggtgaaacactatgcatccctatatctgatgagacctacacacgaggaattgatggtagcaagagatattttcggggc |
431 |
Q |
| |
|
||||||||| ||| ||||||||||||||| || ||||| ||||| |||||||||| ||| || |||||| |||| | | || ||| |||| ||| | |
|
|
| T |
6099 |
gttaccaacaccgaatatccgtggtgaaactctctgcattcctatttctgatgagagctatgaacaaggaatagatgcttgtaaaagaaatttacgg--c |
6196 |
T |
 |
| Q |
432 |
agactcatcttaagtaagggcgacaaaccctattgatcacaggaggttcaaacaaatcttcaacaactttggacgaatgttgggccttggaatatgacgc |
531 |
Q |
| |
|
|||| || ||||| ||||| ||||| |||||| ||| | || |||| ||||| ||||| |||||||||| || |||||| || ||||| |||| || |
|
|
| T |
6197 |
cgactaattttaagcaagggagacaagccctatggattccgtgaagttcggacaaagcttcagcaactttggaagagtgttggcccatggaagatgaagc |
6296 |
T |
 |
| Q |
532 |
cactgggaaaagggtattttgaattctatttttc |
565 |
Q |
| |
|
|||| || |||||||| ||||||||||| ||||| |
|
|
| T |
6297 |
cactaggcaaagggtactttgaattctacttttc |
6330 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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