View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20365_low_6 (Length: 535)
Name: NF20365_low_6
Description: NF20365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20365_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 506; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 18 - 527
Target Start/End: Complemental strand, 42215922 - 42215413
Alignment:
| Q |
18 |
ttgttgatatgtatactgtaggcaaaaacattgaaatctatattaattccacaaagtaagctctttttcactctccttttaaccataccccaattgggca |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42215922 |
ttgttgatatgtatactgtaggcaaaaacattgaaatctatattaattccacaaagtaagctctttttcactctccttttaaccataccccaattgggca |
42215823 |
T |
|
| Q |
118 |
atgtgatgaatttttgaaaataaatgaactaacctgaagtaatctttgactggttttaaattcaggaatcctcaagctgttatttacaagtcagcaagta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42215822 |
atgtgatgaatttttgaaaataaatgaactaacctgaagtaatctttgactggttttaaattcaggaatcctcaagctgttatttacaagtcagcaagta |
42215723 |
T |
|
| Q |
218 |
caagattccctgctccatatcttgcttctttttcatctagagggcctcaaaaaatcactcccaacatcctcaaggtgatcatcatttttctatcttttat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42215722 |
caagattccctgctccatatcttgcttctttttcatctagagggcctcaaaaaatcactcccaacatcctcaaggtgatcatcatttttctatcttttat |
42215623 |
T |
|
| Q |
318 |
cccttgtgttgtgctctatctggtttgtcttctaaatgtcaacattttatgtgaagcctgacttggctgcaccaggattggacatactagctgcttattc |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42215622 |
cccttgtgttgtgctctatctggtttgtcttctaaatgtcaacattttatgtgaagcctgacttggctgcaccaggattggacatactagctgcttattc |
42215523 |
T |
|
| Q |
418 |
caaattggcaacactaacagggtaccctgaagacacacgttttgaagttttcaatatagtatcaggaacatcaatggcatgtccacatgccattgcggct |
517 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42215522 |
caaattggcaacactaacagggtaccctgaagacacacgttttgaagttttcaatatagtatcaggaacatcaatggcatgtccacatgccattgcggct |
42215423 |
T |
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| Q |
518 |
gctgcctatg |
527 |
Q |
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| T |
42215422 |
gctgcttatg |
42215413 |
T |
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