View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20369_high_21 (Length: 247)
Name: NF20369_high_21
Description: NF20369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20369_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 26419583 - 26419804
Alignment:
| Q |
10 |
gcacagacaataagacaaaacctactccagccatttcacctgtgtttatttgccactttggcttcaattttggctcttcctctaggtgggattaaatatt |
109 |
Q |
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| T |
26419583 |
gcacagacaataagacaaaacctactccagccatttcacctgtgtttatttgccactttggcttcaattttggctcttcctctaggtgggattaaatatt |
26419682 |
T |
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| Q |
110 |
tattgtgctctagcgtccaccaaatttacatgcaacttattgaactctggggtcacggtc--ttgttaatcttaattctgacagaatttatagcgttagg |
207 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
26419683 |
tattgtgctctagcgtccaccaaatttacatgcaactcattgaactctggggtcacggtctattgttaatcttaattctgacagaatttatagcgttagg |
26419782 |
T |
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| Q |
208 |
tgatccttgctaaccatcacac |
229 |
Q |
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|||||||||||||||||||||| |
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| T |
26419783 |
tgatccttgctaaccatcacac |
26419804 |
T |
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