View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20369_high_9 (Length: 390)
Name: NF20369_high_9
Description: NF20369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20369_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 41346426 - 41346778
Alignment:
| Q |
24 |
gataaataagtttttaatccgtaaatatattaaattttgtgtttagtacctctaaattttttctttgaataatggtcctacaaatgtttttctatcacta |
123 |
Q |
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| T |
41346426 |
gataaataagtttttaatccgtaaatatattaaattttgtgtttagtacctctaaattttttctttgaataatggtcctgcagatgtttttctatcacta |
41346525 |
T |
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| Q |
124 |
tttttcgttcttgtacnnnnnnnnnn-cttcatgaaatggaaaataaaacacaaacaaggggacaagaaagaaaactatatgtttcgtagacaagcgaca |
222 |
Q |
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| T |
41346526 |
tttttcgttcttgtacttttttttcttcttcataaaatggaaaataaaacacaaacaaggggacaagaaagaaaactatatgtttcgtagacaagcaaca |
41346625 |
T |
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| Q |
223 |
cctataacatcgtccatcaacacgagaccgagttgaggaggacaactattccaaatctacaaggtatcatttgaagaaactttagtcttcgtaagtcaat |
322 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41346626 |
cctataacatcgtccatcaacacgagaccgagttgaggaggacaactattccaaatctacaaggtatcatttgaagaaactttagtcttcgtaagccaat |
41346725 |
T |
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| Q |
323 |
attgacacattgactttcctctctaagagtatgttgaaaagagacgtacaatc |
375 |
Q |
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| T |
41346726 |
aatggcacattcactgtcctctctaagagtatgttgaaaagagacgtacaatc |
41346778 |
T |
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