View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20369_low_13 (Length: 321)
Name: NF20369_low_13
Description: NF20369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20369_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 15 - 306
Target Start/End: Original strand, 2086024 - 2086315
Alignment:
| Q |
15 |
actccattaaattgaaaaattgaagcaaatattaaattcatttttactggaatatatccgtaactgaagcaaataatttattctagtttatgaaaattta |
114 |
Q |
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| T |
2086024 |
actccattaaattgaaaaattgaagcaaatattaaattcatttttactggaatatatccgtaactgaagcaaataatttattctagtttatgaaaattta |
2086123 |
T |
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| Q |
115 |
aaatccgatttcattttgtgatatatatacacacactatagtatagtgtgactctacaaaaatacattttagagnnnnnnnttagagtgacaaggtgagt |
214 |
Q |
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| T |
2086124 |
aaatccgatttcattttgtgatatatatacacacactatagtatagtgtgactctacaaaaatacattttagagaaaaaaattagagtgacaaggtgagt |
2086223 |
T |
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| Q |
215 |
gattcatcttcttcataagttcttatgttatattcttcatttctttgaaaatgcatggaatgcatgatgatacttttttagttagcattttt |
306 |
Q |
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| T |
2086224 |
gattcatcttcttcataagttcttatgttatattcttcatttctttgaaaatgcatggaatgcatgatgatacttttttagttagcattttt |
2086315 |
T |
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