View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2036_low_6 (Length: 370)

Name: NF2036_low_6
Description: NF2036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2036_low_6
NF2036_low_6
[»] chr8 (47 HSPs)
chr8 (173-360)||(34810638-34810830)
chr8 (20-116)||(34810887-34810983)
chr8 (283-354)||(4054289-4054360)
chr8 (286-354)||(10692439-10692507)
chr8 (283-354)||(25987789-25987861)
chr8 (285-351)||(27325757-27325823)
chr8 (285-354)||(31249527-31249596)
chr8 (285-354)||(43397780-43397849)
chr8 (286-354)||(37449428-37449496)
chr8 (287-354)||(44061718-44061786)
chr8 (278-353)||(7271844-7271919)
chr8 (286-357)||(43715875-43715946)
chr8 (284-357)||(23754706-23754780)
chr8 (285-354)||(22719439-22719508)
chr8 (286-357)||(5849565-5849637)
chr8 (286-354)||(12898932-12899000)
chr8 (286-357)||(43285962-43286034)
chr8 (284-354)||(26026894-26026965)
chr8 (283-360)||(27300343-27300420)
chr8 (286-354)||(2730963-2731032)
chr8 (283-351)||(5600992-5601061)
chr8 (283-351)||(5639559-5639628)
chr8 (286-354)||(7598708-7598777)
chr8 (285-357)||(25830245-25830318)
chr8 (285-354)||(42768206-42768274)
chr8 (274-354)||(43397544-43397625)
chr8 (286-357)||(6440081-6440153)
chr8 (287-354)||(11253545-11253610)
chr8 (286-353)||(33100472-33100540)
chr8 (286-357)||(35067160-35067232)
chr8 (286-357)||(45405531-45405603)
chr8 (286-353)||(24479236-24479303)
chr8 (279-357)||(42786659-42786738)
chr8 (286-359)||(3946240-3946314)
chr8 (284-357)||(33279548-33279622)
chr8 (273-360)||(12659038-12659126)
chr8 (284-350)||(17005475-17005543)
chr8 (284-350)||(17571705-17571773)
chr8 (282-354)||(21273713-21273785)
chr8 (289-354)||(36660453-36660518)
chr8 (289-354)||(44825446-44825511)
chr8 (286-357)||(67160-67232)
chr8 (286-357)||(12655922-12655994)
chr8 (285-353)||(13971124-13971192)
chr8 (286-354)||(32501199-32501267)
chr8 (325-357)||(34996360-34996392)
chr8 (286-357)||(38675603-38675675)
[»] chr5 (46 HSPs)
chr5 (284-360)||(28306129-28306205)
chr5 (284-352)||(1764222-1764290)
chr5 (286-354)||(18258796-18258864)
chr5 (286-354)||(33037520-33037588)
chr5 (286-353)||(1274358-1274425)
chr5 (284-354)||(5721820-5721890)
chr5 (289-354)||(19522006-19522071)
chr5 (281-357)||(22098250-22098327)
chr5 (289-354)||(36738951-36739016)
chr5 (286-354)||(1079955-1080023)
chr5 (286-354)||(22649664-22649732)
chr5 (286-354)||(26791247-26791315)
chr5 (286-357)||(35075575-35075647)
chr5 (285-352)||(36563056-36563123)
chr5 (283-357)||(40829411-40829486)
chr5 (284-357)||(21155985-21156059)
chr5 (286-354)||(13089784-13089853)
chr5 (281-353)||(19481185-19481258)
chr5 (286-354)||(35646382-35646451)
chr5 (286-353)||(189706-189774)
chr5 (290-354)||(5168187-5168251)
chr5 (286-354)||(7076571-7076639)
chr5 (284-344)||(15479467-15479527)
chr5 (286-354)||(18660759-18660827)
chr5 (283-354)||(39807716-39807788)
chr5 (279-354)||(41175708-41175784)
chr5 (283-353)||(6517709-6517780)
chr5 (286-352)||(11954431-11954498)
chr5 (286-352)||(17097806-17097873)
chr5 (286-360)||(18638822-18638896)
chr5 (323-357)||(884479-884513)
chr5 (286-344)||(1981890-1981948)
chr5 (284-357)||(7287189-7287263)
chr5 (286-359)||(8920078-8920152)
chr5 (323-357)||(26686919-26686953)
chr5 (323-357)||(26956650-26956684)
chr5 (323-360)||(2117621-2117658)
chr5 (325-354)||(12718383-12718412)
chr5 (285-357)||(16690498-16690571)
chr5 (327-360)||(29803266-29803299)
chr5 (327-360)||(41460157-41460190)
chr5 (286-346)||(8686891-8686951)
chr5 (286-354)||(14051319-14051387)
chr5 (327-359)||(19437298-19437330)
chr5 (286-357)||(24468285-24468357)
chr5 (285-313)||(35301482-35301510)
[»] chr6 (27 HSPs)
chr6 (283-354)||(25811841-25811912)
chr6 (284-354)||(34047385-34047455)
chr6 (286-354)||(552793-552861)
chr6 (286-354)||(22079566-22079634)
chr6 (287-357)||(5570333-5570403)
chr6 (283-352)||(11635539-11635609)
chr6 (286-354)||(8505776-8505845)
chr6 (285-352)||(8098602-8098667)
chr6 (284-344)||(31077791-31077851)
chr6 (289-354)||(5080570-5080635)
chr6 (286-354)||(17551381-17551450)
chr6 (323-355)||(5522639-5522671)
chr6 (286-354)||(5694154-5694222)
chr6 (286-354)||(8645309-8645377)
chr6 (287-357)||(24900776-24900845)
chr6 (286-353)||(32459520-32459588)
chr6 (286-360)||(9188941-9189015)
chr6 (286-349)||(14817932-14817995)
chr6 (285-320)||(18737592-18737627)
chr6 (286-354)||(15318190-15318259)
chr6 (284-344)||(33712318-33712379)
chr6 (286-353)||(2242025-2242093)
chr6 (286-357)||(16337922-16337994)
chr6 (286-353)||(20822871-20822939)
chr6 (286-354)||(32316931-32316999)
chr6 (323-355)||(32444402-32444434)
chr6 (286-334)||(33430379-33430427)
[»] chr4 (42 HSPs)
chr4 (279-354)||(46634093-46634168)
chr4 (284-357)||(37060315-37060389)
chr4 (284-354)||(5622456-5622526)
chr4 (286-354)||(10250518-10250586)
chr4 (286-354)||(23369335-23369403)
chr4 (286-354)||(37297049-37297117)
chr4 (286-354)||(43174984-43175052)
chr4 (285-354)||(37997255-37997322)
chr4 (285-354)||(26732224-26732293)
chr4 (286-354)||(27051089-27051157)
chr4 (286-354)||(29531609-29531676)
chr4 (286-354)||(40348794-40348862)
chr4 (286-354)||(46212970-46213038)
chr4 (286-354)||(51986042-51986110)
chr4 (287-354)||(2268510-2268577)
chr4 (287-354)||(27354357-27354424)
chr4 (286-357)||(50890073-50890144)
chr4 (286-353)||(55609169-55609236)
chr4 (284-357)||(1795981-1796055)
chr4 (286-344)||(44539736-44539794)
chr4 (286-351)||(51255746-51255812)
chr4 (286-354)||(5932766-5932835)
chr4 (277-354)||(26910194-26910270)
chr4 (286-354)||(39158105-39158174)
chr4 (286-354)||(26724972-26725040)
chr4 (286-354)||(29175227-29175295)
chr4 (286-354)||(36177906-36177974)
chr4 (286-354)||(38134353-38134421)
chr4 (284-352)||(39440482-39440550)
chr4 (286-354)||(39478435-39478503)
chr4 (284-354)||(149487-149558)
chr4 (287-357)||(2401611-2401682)
chr4 (287-357)||(31641565-31641633)
chr4 (285-354)||(11068689-11068756)
chr4 (286-354)||(2738270-2738339)
chr4 (284-344)||(32012894-32012955)
chr4 (289-354)||(38376494-38376559)
chr4 (287-340)||(39731903-39731956)
chr4 (286-354)||(50506393-50506462)
chr4 (286-354)||(27964987-27965055)
chr4 (286-354)||(45082981-45083049)
chr4 (286-357)||(50721744-50721816)
[»] chr1 (60 HSPs)
chr1 (283-354)||(37685328-37685399)
chr1 (283-354)||(37700119-37700190)
chr1 (283-354)||(23645408-23645479)
chr1 (285-354)||(47642609-47642679)
chr1 (286-351)||(8350202-8350267)
chr1 (289-354)||(30735296-30735361)
chr1 (281-354)||(31088176-31088249)
chr1 (285-354)||(37275036-37275105)
chr1 (286-354)||(33100808-33100876)
chr1 (286-354)||(37619544-37619612)
chr1 (286-352)||(4213072-4213139)
chr1 (286-357)||(41677324-41677395)
chr1 (286-354)||(649768-649837)
chr1 (286-354)||(9566963-9567032)
chr1 (286-351)||(27465063-27465128)
chr1 (289-354)||(29359642-29359707)
chr1 (285-357)||(49931552-49931625)
chr1 (286-354)||(2571635-2571702)
chr1 (283-354)||(15470059-15470131)
chr1 (286-346)||(37985397-37985457)
chr1 (281-351)||(48983673-48983744)
chr1 (283-357)||(49020403-49020478)
chr1 (286-352)||(35369700-35369766)
chr1 (286-344)||(45333570-45333628)
chr1 (285-334)||(3159375-3159424)
chr1 (286-343)||(3982045-3982102)
chr1 (289-354)||(40861263-40861328)
chr1 (286-354)||(48858823-48858892)
chr1 (286-357)||(9987951-9988023)
chr1 (286-353)||(34254354-34254422)
chr1 (325-357)||(50118896-50118928)
chr1 (307-354)||(3851179-3851226)
chr1 (325-360)||(12489578-12489613)
chr1 (286-360)||(27352630-27352704)
chr1 (286-352)||(37139927-37139994)
chr1 (285-354)||(5771750-5771820)
chr1 (286-344)||(15083063-15083121)
chr1 (326-360)||(25702212-25702246)
chr1 (323-357)||(27687519-27687553)
chr1 (323-357)||(32960386-32960420)
chr1 (323-357)||(49570034-49570068)
chr1 (285-351)||(50932305-50932371)
chr1 (326-360)||(51168765-51168799)
chr1 (283-355)||(2362353-2362425)
chr1 (327-360)||(3826812-3826845)
chr1 (301-354)||(18434810-18434863)
chr1 (284-340)||(19947757-19947814)
chr1 (327-360)||(23554792-23554825)
chr1 (323-360)||(40596051-40596088)
chr1 (286-354)||(52362482-52362551)
chr1 (285-360)||(3919299-3919374)
chr1 (286-353)||(10890049-10890117)
chr1 (286-354)||(12657222-12657290)
chr1 (286-353)||(13489662-13489730)
chr1 (286-353)||(15705065-15705133)
chr1 (286-357)||(30535991-30536063)
chr1 (325-357)||(45470840-45470872)
chr1 (329-357)||(49647149-49647177)
chr1 (286-354)||(50726251-50726319)
chr1 (302-357)||(52437510-52437566)
[»] chr3 (59 HSPs)
chr3 (284-354)||(26014810-26014880)
chr3 (288-354)||(33939238-33939304)
chr3 (287-357)||(41308926-41308996)
chr3 (284-353)||(37302544-37302613)
chr3 (286-354)||(46623907-46623975)
chr3 (286-354)||(5244229-5244297)
chr3 (286-354)||(36671017-36671085)
chr3 (286-354)||(38926628-38926696)
chr3 (287-354)||(47472330-47472397)
chr3 (286-355)||(26550237-26550307)
chr3 (286-354)||(288725-288794)
chr3 (277-354)||(52326010-52326087)
chr3 (286-354)||(27541505-27541573)
chr3 (285-353)||(37503751-37503819)
chr3 (284-352)||(38671616-38671684)
chr3 (286-352)||(9862533-9862600)
chr3 (286-353)||(16479632-16479699)
chr3 (299-354)||(34064108-34064163)
chr3 (287-354)||(44413923-44413990)
chr3 (288-354)||(45711442-45711508)
chr3 (286-351)||(52939653-52939716)
chr3 (285-354)||(16969569-16969638)
chr3 (286-354)||(27168684-27168753)
chr3 (289-354)||(41505494-41505559)
chr3 (287-351)||(42357088-42357150)
chr3 (283-344)||(52254151-52254212)
chr3 (294-357)||(3648587-3648651)
chr3 (286-354)||(5114078-5114146)
chr3 (282-354)||(6178428-6178500)
chr3 (281-360)||(9027608-9027687)
chr3 (286-357)||(19150318-19150390)
chr3 (286-357)||(49021711-49021783)
chr3 (286-357)||(52963315-52963387)
chr3 (286-352)||(10811135-10811202)
chr3 (295-353)||(26772377-26772436)
chr3 (286-344)||(32362933-32362992)
chr3 (325-360)||(35425669-35425704)
chr3 (287-354)||(35597163-35597230)
chr3 (283-360)||(1295329-1295406)
chr3 (285-354)||(9692724-9692794)
chr3 (285-354)||(14207260-14207330)
chr3 (285-354)||(14215008-14215078)
chr3 (281-354)||(21196119-21196193)
chr3 (283-360)||(26668839-26668916)
chr3 (284-349)||(34057960-34058026)
chr3 (287-353)||(44855954-44856020)
chr3 (286-354)||(3347124-3347193)
chr3 (286-354)||(24095408-24095477)
chr3 (327-360)||(27276775-27276808)
chr3 (281-353)||(37894246-37894319)
chr3 (285-357)||(48352995-48353068)
chr3 (286-354)||(7668190-7668258)
chr3 (286-354)||(8847110-8847178)
chr3 (286-354)||(20547993-20548061)
chr3 (285-360)||(32457752-32457827)
chr3 (286-354)||(42358641-42358709)
chr3 (286-357)||(45293028-45293100)
chr3 (285-357)||(46815858-46815930)
chr3 (286-353)||(55399999-55400067)
[»] chr7 (34 HSPs)
chr7 (285-354)||(44189313-44189382)
chr7 (286-354)||(30941386-30941454)
chr7 (286-354)||(13152593-13152661)
chr7 (286-354)||(44895575-44895643)
chr7 (284-360)||(17500695-17500771)
chr7 (284-360)||(17552443-17552519)
chr7 (279-348)||(32529863-32529932)
chr7 (286-354)||(41189546-41189614)
chr7 (295-354)||(43025349-43025408)
chr7 (286-352)||(47448826-47448893)
chr7 (284-354)||(2362662-2362732)
chr7 (286-351)||(12007191-12007257)
chr7 (286-359)||(35586770-35586844)
chr7 (286-359)||(37899323-37899397)
chr7 (289-357)||(26018043-26018112)
chr7 (286-357)||(47012569-47012641)
chr7 (286-353)||(31398124-31398191)
chr7 (283-357)||(31445314-31445389)
chr7 (284-350)||(32777713-32777780)
chr7 (299-354)||(38073209-38073264)
chr7 (286-340)||(25192901-25192955)
chr7 (326-360)||(26123407-26123441)
chr7 (285-354)||(38956621-38956688)
chr7 (285-351)||(29723932-29724000)
chr7 (327-360)||(37392084-37392117)
chr7 (285-334)||(38861095-38861144)
chr7 (323-355)||(237050-237082)
chr7 (283-354)||(4292425-4292496)
chr7 (287-354)||(23910253-23910321)
chr7 (283-354)||(34978293-34978365)
chr7 (287-354)||(38340385-38340453)
chr7 (286-357)||(41018663-41018735)
chr7 (286-357)||(42584802-42584874)
chr7 (282-357)||(42598207-42598283)
[»] scaffold0098 (1 HSPs)
scaffold0098 (286-354)||(49295-49363)
[»] chr2 (40 HSPs)
chr2 (286-354)||(18254212-18254280)
chr2 (286-354)||(6511251-6511319)
chr2 (286-354)||(9207590-9207658)
chr2 (286-357)||(24766152-24766224)
chr2 (286-354)||(41042254-41042322)
chr2 (286-354)||(43487379-43487447)
chr2 (285-354)||(9760016-9760086)
chr2 (285-353)||(22888825-22888893)
chr2 (290-354)||(29349510-29349574)
chr2 (285-357)||(44287440-44287512)
chr2 (286-360)||(1052493-1052567)
chr2 (279-342)||(27490745-27490808)
chr2 (282-355)||(40210069-40210143)
chr2 (283-352)||(42421903-42421972)
chr2 (286-354)||(9990691-9990759)
chr2 (286-357)||(18737873-18737945)
chr2 (287-351)||(34945096-34945160)
chr2 (325-360)||(2308319-2308354)
chr2 (286-360)||(13711061-13711135)
chr2 (289-344)||(36193737-36193792)
chr2 (289-351)||(8848701-8848763)
chr2 (284-357)||(12784398-12784472)
chr2 (324-354)||(13711369-13711399)
chr2 (309-354)||(5054632-5054677)
chr2 (285-353)||(6999071-6999140)
chr2 (281-357)||(7497991-7498067)
chr2 (327-360)||(9449412-9449445)
chr2 (323-360)||(25801810-25801847)
chr2 (283-352)||(32944508-32944576)
chr2 (323-360)||(36133011-36133048)
chr2 (290-354)||(38911932-38911997)
chr2 (286-354)||(43057064-43057133)
chr2 (285-357)||(1040513-1040585)
chr2 (286-354)||(2464251-2464319)
chr2 (286-357)||(6336252-6336324)
chr2 (287-352)||(7367869-7367936)
chr2 (325-357)||(8482232-8482264)
chr2 (286-353)||(9634439-9634507)
chr2 (286-354)||(22416213-22416281)
chr2 (286-354)||(38874618-38874686)
[»] scaffold0003 (1 HSPs)
scaffold0003 (286-354)||(366294-366362)
[»] scaffold0056 (1 HSPs)
scaffold0056 (286-354)||(76622-76690)
[»] scaffold0432 (1 HSPs)
scaffold0432 (286-352)||(6524-6591)
[»] scaffold0024 (1 HSPs)
scaffold0024 (286-362)||(60469-60545)
[»] scaffold0519 (1 HSPs)
scaffold0519 (287-354)||(11784-11849)
[»] scaffold0110 (1 HSPs)
scaffold0110 (286-344)||(28339-28398)
[»] scaffold0034 (1 HSPs)
scaffold0034 (286-352)||(101910-101977)
[»] scaffold0199 (1 HSPs)
scaffold0199 (289-354)||(8671-8736)
[»] scaffold0128 (1 HSPs)
scaffold0128 (286-354)||(10936-11005)
[»] scaffold0020 (1 HSPs)
scaffold0020 (285-360)||(155905-155980)


Alignment Details
Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 173 - 360
Target Start/End: Complemental strand, 34810830 - 34810638
Alignment:
Q  173 caccaaagatttcattcttaataatccactcacaaggattatttttattgaaaagaatagattcttacaatttcatttgtgttagttctagtggatcatc 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34810830 caccaaagatttcattcttaataatccactcacaaggattatttttattgaaaagaatagattcttacaatttcatttgtgttagttctagtggatcatc 34810731  T
Q  273 -----tacattaattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
         | |||||||||| |||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||    
T  34810730 tgcattgcattaattaaagagaaatgatatttgaacaaccattttttacaactcttgtgataactttatctctcatattcatattatattctt 34810638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 34810983 - 34810887
Alignment:
Q  20 tgttaatctattaatttatcctctatgttttgtgaataaagttttgaagaagactgatgaaaatatgtttctaataagtttaaacagccaattgacc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34810983 tgttaatctattaatttatcctctatgttttgtgaataaagttttgaagaagactgatgaaaatatgtttctaataagtttaaacagccaattgacc 34810887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 4054360 - 4054289
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||    
T  4054360 aatgagaaatgatatttgaacaaccattttttacaacttctgtgataactttatctttcatattcacattat 4054289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 10692439 - 10692507
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| |||||||||||| |  |||||||||||||||||||||| |||||||||    
T  10692439 gagaaatgatatttgaacaatcattttttataatttttgtgacaactttatctctcatactcacattat 10692507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 25987861 - 25987789
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| |||||||||||||||||||| | ||||  |||||||||||||||||||||| |||||||||    
T  25987861 aatgagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttatctctcatactcacattat 25987789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 27325757 - 27325823
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| ||||||    
T  27325757 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 27325823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 31249596 - 31249527
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||| ||||  |||||||| ||| ||||||||| |||||||||    
T  31249596 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaattttttctctcatactcacattat 31249527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 43397780 - 43397849
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||| ||||  ||| |||||||| ||||||||| |||||||||    
T  43397780 tgagaaatgatatttgaacaaccattttttacaacttttgttacaactttctctctcatactcacattat 43397849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 37449496 - 37449428
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||| ||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  37449496 gagaaatgatatttcaacaaccattttttacaacttttgtgacaactttttctctcatactcacattat 37449428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 44061718 - 44061786
Alignment:
Q  287 agaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| |||||||||||||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  44061718 agaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacattat 44061786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 7271844 - 7271919
Alignment:
Q  278 taattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||| |||||||||| |||||||||||  |||||| | ||||  |||||||||||||||||||||| ||||||||    
T  7271844 taatttatgagaaatgatatttgaacaataatttttaacaacttttgtgacaactttatctctcatactcacatta 7271919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 43715875 - 43715946
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||||||||| || ||||  |||||||||||| ||||||||| ||||||||||||    
T  43715875 gagaaatgatatttgtacaaccattttctaaaacttttgtgacaactttctctctcatactcacattatatt 43715946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 23754780 - 23754706
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| |||||||||||||||||||| ||||||  |||||||||||| ||| ||||| ||| ||||||||    
T  23754780 atgagaaatgatatttgaacaaccattttttaataacttttgtgacaactttctctttcatactcatattatatt 23754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 22719439 - 22719508
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||| ||||  |||||||| ||| ||||||||  |||||||||    
T  22719439 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaattttctctctcatgctcacattat 22719508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 5849637 - 5849565
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||||||||||||||||| ||||||  ||||| | |||||| ||||||||||| ||||||||    
T  5849637 gagaaatgatatttgaacaaccattttttgataacttttgtgatagctttatatctcatattcatattatatt 5849565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 12899000 - 12898932
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||  |||||||| ||||||||||||||| |  |||||||||||| ||||||||| |||||||||    
T  12899000 gagaaatcatatttgaataaccattttttataaattttgtgacaactttttctctcatactcacattat 12898932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 43286034 - 43285962
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||||||||| || |||||  |||||||||||| ||||||||| ||||||||||||    
T  43286034 gagaaatgatatttggacaaccattttctaataacttttgtgacaactttctctctcatactcacattatatt 43285962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 26026894 - 26026965
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| |||||||||||||||||||| | ||||  |||||||||||| | ||||||| |||||||||    
T  26026894 atgagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctttctcatactcacattat 26026965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 27300343 - 27300420
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttt-tataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||||| |||||| |||||||||||| || ||||  ||| |||||||| ||||||||||||||||||| |||||    
T  27300343 aatgagaaatgatatttgtacaaccatttttgtacaacttttgt-acaactttctctctcatattcacattatcttctt 27300420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 2731032 - 2730963
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||| ||||| | ||||  ||| |||||||| |||||||||||||||||||    
T  2731032 gagaaatgatatttgaacaaccactttttgacaacttttgtaacaactttctctctcatattcacattat 2730963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 5601061 - 5600992
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||||||| |||||||||||||||||||| | ||||  |||||||| ||| ||||||||| ||||||    
T  5601061 aatgagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcatactcacat 5600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 5639559 - 5639628
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||||||| |||||||||||||||||||| | ||||  |||||||| ||| ||||||||| ||||||    
T  5639559 aatgagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcatactcacat 5639628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 7598708 - 7598777
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| | ||||  |||||| ||||| ||||||||| |||||||||    
T  7598708 gagaaatgatatttgaacaaccattttttgacaacttttgtgaccactttctctctcatactcacattat 7598777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 357
Target Start/End: Complemental strand, 25830318 - 25830245
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||| ||||||||||| ||  ||||  |||||||||||| ||||||||| ||||||||||||    
T  25830318 tgagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacattatatt 25830245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 42768206 - 42768274
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| |||||||||||  |||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  42768206 tgagaaatgatatttgaacaattattttttacaactt-tgtgacaactttttctctcatactcacattat 42768274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 43397544 - 43397625
Alignment:
Q  274 acattaattaatgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| | |||||||||| |||||||||| ||| ||| |||||| |  |||||||| ||||||||||||| |||||||||    
T  43397544 acattaaattatgagaaatgatatttgaacatccactttgttataatttttgtgacaattttatctctcataatcacattat 43397625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 6440081 - 6440153
Alignment:
Q  286 gagaaatgttatttgaacaaccattt-tttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||| |||| |||| ||||  |||||||||||| ||||||||| ||||||||||||    
T  6440081 gagaaatgatatttgtacaactatttctttacaacttttgtgacaactttctctctcatactcacattatatt 6440153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 11253610 - 11253545
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| ||||||||||||||||||||| || |  |||||||||||| ||||||||| | |||||||    
T  11253610 agaaatgatatttgaacaaccattttttacaatt--tgtgacaactttctctctcatacttacattat 11253545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 33100540 - 33100472
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||||||||||| ||  ||||  |||||||||||| ||||||||| ||||||||    
T  33100540 gagaaatgatatttgaacaaccattttataacaacttttgtgacaactttctctctcatactcacatta 33100472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 35067160 - 35067232
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| |||||||||| |||  ||||  |||||||||||| ||||||||| ||||||||||||    
T  35067160 gagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttctctctcatactcacattatatt 35067232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 45405531 - 45405603
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| ||| || |||||||||||||| ||| |  |||||||||||| ||| ||||||||||||||||||    
T  45405531 gagaaatgatatatgtacaaccattttttaataatttttgtgacaactttttctttcatattcacattatatt 45405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 24479236 - 24479303
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| ||||||||||||||||||| ||||||  |||||||| ||| | | ||||| ||||||||    
T  24479236 gagaaatgatatttgaacaaccatttttgataacttttgtgacaattttctttttcatactcacatta 24479303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 42786738 - 42786659
Alignment:
Q  279 aattaatgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||| |||||||||| |||||| ||||||||||| ||| || |  |||||||||||| ||||| ||| ||||||||||||    
T  42786738 aatttatgagaaatgatatttgtacaaccattttcttacaatttttgtgacaactttctctcttatactcacattatatt 42786659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 3946240 - 3946314
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattct 359  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| |||||| |||||||    
T  3946240 gagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacatcatattct 3946314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 33279622 - 33279548
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||| ||||| |||||| |||||||||| |||  ||||  |||||||||||||||||||||| | ||||||||||    
T  33279622 atgaaaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttatctctcatacttacattatatt 33279548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 12659038 - 12659126
Alignment:
Q  273 tacattaat-taatgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||| ||| |||||||| |||||| ||||||| ||||||  ||||  | |||||||||| ||||||||| |||||||||||||||    
T  12659038 tacattaatgtaaggagaaatgatatttgtacaaccaatttttaacaactttt-tgacaactttctctctcatactcacattatattctt 12659126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 17005475 - 17005543
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttt--ttataactcctgtgacaactttatctctcatattcaca 350  Q
    |||||||||| ||| ||||||| ||||||  ||||||||  |||||||||||| ||||| |||||||||    
T  17005475 atgagaaatgatatctgaacaatcattttttttataacttttgtgacaactttctctcttatattcaca 17005543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 17571773 - 17571705
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt--ataactcctgtgacaactttatctctcatattcaca 350  Q
    |||||||||| ||| ||||||| ||||||||  ||||||  |||||||||||| ||||| |||||||||    
T  17571773 atgagaaatgatatctgaacaatcattttttttataacttttgtgacaactttctctcttatattcaca 17571705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 21273785 - 21273713
Alignment:
Q  282 taatgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||||| |||||| ||||||||||| | | |||| || |||||| ||||||||||||| |||||||||    
T  21273785 taatgagaaatgatatttgtacaaccattttgtgacaacttct-tgacaattttatctctcatactcacattat 21273713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 36660518 - 36660453
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||| |||||||||||||||||||| |  ||| |||||||| ||||||||| | |||||||    
T  36660518 aaatgatatgtgaacaaccattttttataatttttgtaacaactttctctctcatacttacattat 36660453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 44825446 - 44825511
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| || |||||||| ||||||| | ||||  |||||||| ||||||||||||| |||||||||    
T  44825446 aaatgataattgaacaatcatttttgacaacttttgtgacaattttatctctcatactcacattat 44825511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 67232 - 67160
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||||||||| ||  ||||  |||||||||||| |||||||||  |||||||||||    
T  67232 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatacccacattatatt 67160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 12655922 - 12655994
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||||||||| || |||||  ||| | |||||| ||||||||||||| ||||||||    
T  12655922 gagaaatgatatttgtacaaccattttataataacttttgtaataactttttctctcatattcatattatatt 12655994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 13971124 - 13971192
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||||||| |||||||||| ||||||  || ||||  |||||||||||| |||||| || ||||||||    
T  13971124 tgagaaatgatatttgaacatccatttcatacaacttttgtgacaactttctctctcgtactcacatta 13971192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 32501267 - 32501199
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| ||||||||| ||||  | | |||| ||| ||||||||| |||||||||    
T  32501267 gagaaatgatatttgaacaatcattttttacaacttttttaacaattttctctctcatactcacattat 32501199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 34996392 - 34996360
Alignment:
Q  325 tgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| ||||||||||||||||||||||    
T  34996392 tgacaactttctctctcatattcacattatatt 34996360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 38675603 - 38675675
Alignment:
Q  286 gagaaatgttatttgaacaaccattttt-tataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| |||||||||||| ||||| |  | |||||||||| |||||||||  |||||||||||    
T  38675603 gagaaatgatatttgtacaaccatttttctataatttttatgacaactttctctctcatacccacattatatt 38675675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 28306205 - 28306129
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||| |||||    
T  28306205 atgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttatctctcatactcacattatcttctt 28306129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 1764222 - 1764290
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||||| ||||||||||| ||||||||| |||| ||||||||||||| ||||||||| |||||||    
T  1764222 atgagaaatgatatttgaacaatcattttttacaacttctgtgacaactttctctctcatactcacatt 1764290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 18258864 - 18258796
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||||||||   ||||||||||| ||||||||| | |||||||    
T  18258864 gagaaatgatatttgaacaaccattttttataactttagtgacaactttctctctcatacttacattat 18258796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 33037520 - 33037588
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||||||    
T  33037520 gagaaatgatatttgaacaaccattttttacaacttttatgacaactttctctctcatactcacattat 33037588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 1274358 - 1274425
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| ||||||||||||||||||| | ||||  |||||||||||||||| ||||| ||||||||    
T  1274358 gagaaatgatatttgaacaaccatttttgacaacttttgtgacaactttatctttcatactcacatta 1274425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 5721890 - 5721820
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| |||||||||||| |||||||| || |  |||||||||||||||||||||| | |||||||    
T  5721890 atgagaaatgatatttgaacaactattttttacaatttttgtgacaactttatctctcatactgacattat 5721820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 19522071 - 19522006
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| ||| ||||| |||||||||    
T  19522071 aaatgatatttgaacaaccattttttacaacttttgtgacaactttctctttcatactcacattat 19522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 22098250 - 22098327
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||||||| |||||| ||||||||||| ||  ||||  |||||||||||| ||||||||| ||||||||||||    
T  22098250 ttaatgagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacattatatt 22098327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 36738951 - 36739016
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||| ||||| ||||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  36738951 aaatgatatatgaaccaccattttttacaactcttgtgacaactttctctctcatactcacattat 36739016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 1080023 - 1079955
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||  |||||||| || |  |||||||||||| |||||||||||||||||||    
T  1080023 gagaaatgatatttgaacaattattttttacaatttttgtgacaactttctctctcatattcacattat 1079955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 22649732 - 22649664
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| || |  |||||||| ||| ||||||||| |||||||||    
T  22649732 gagaaatgatatttgaacaaccattttttacaatttttgtgacaattttctctctcatactcacattat 22649664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 26791315 - 26791247
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||  ||||||||||||||||||||| ||||  |||||||||||| ||||||||  |||||||||    
T  26791315 gagaaataatatttgaacaaccattttttacaacttttgtgacaactttctctctcatgctcacattat 26791247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 35075647 - 35075575
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| ||||||||||| |||||||| | ||||  |||||||||||| ||||||||| ||||||||||||    
T  35075647 gagaaatgatatttgaacaatcattttttgacaactgatgtgacaactttttctctcatactcacattatatt 35075575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 36563123 - 36563056
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||||| ||||||||||||| ||||| |||| |  ||||||||||| |||| |||||||||||||    
T  36563123 tgagaaatgatatttgaacaaccttttttgataatttttgtgacaacttaatctttcatattcacatt 36563056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 40829411 - 40829486
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||||| |||||| ||||||||||||| |||| |  |||||||| ||| ||||||||| ||||||||||||    
T  40829411 aatgagaaatgatatttgtacaaccattttttaataatttttgtgacaattttttctctcatactcacattatatt 40829486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 21155985 - 21156059
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| |||||||||||||||||||| | ||||  ||||||| |||| ||| ||||| ||||||||||||    
T  21155985 atgagaaatgatatttgaacaaccattttttgacaacttttgtgacacctttctctttcatactcacattatatt 21156059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 13089853 - 13089784
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||| ||||| |||||||||    
T  13089853 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctttcatactcacattat 13089784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 19481258 - 19481185
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||| |||||||| |||||||||| ||||||| | ||||||  |||||||||||| ||||||||| ||||||||    
T  19481258 ttaaagagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacatta 19481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 35646382 - 35646451
Alignment:
Q  286 gagaaatgttatttgaacaacca-ttttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||| ||||||||||||   |||| |||||| ||||||||| |||||||||    
T  35646382 gagaaatggtatttgaacaaccatttttttataactttagtgataactttctctctcatactcacattat 35646451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 189774 - 189706
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | ||||||  |||||||||||| ||||||||| ||||||||    
T  189774 gagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacatta 189706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 5168187 - 5168251
Alignment:
Q  290 aatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||| ||||||||||||| ||||| | ||||   ||||||||||||||||||||| |||||||||    
T  5168187 aatgatatttgaacaaccgtttttcacaactttagtgacaactttatctctcatactcacattat 5168251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 7076639 - 7076571
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| |||||||||||| |  |||||||| ||| ||||||||| ||| |||||    
T  7076639 gagaaatgatatttgaacaatcattttttataatttttgtgacaattttctctctcatactcatattat 7076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 15479467 - 15479527
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    |||||||||| ||||||||||| ||||||||| ||||  | |||||||||| |||||||||    
T  15479467 atgagaaatgatatttgaacaatcattttttacaacttttatgacaactttctctctcata 15479527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 18660759 - 18660827
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||| | ||||  |||||||| ||| ||||||||| |||| ||||    
T  18660759 gagaaatgatatttgaacaaccatttttgacaacttttgtgacaattttctctctcatactcacgttat 18660827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 39807788 - 39807716
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaacttta-tctctcatattcacattat 354  Q
    ||||||||||| ||||||||||||||||||||| || |  | ||||||||||| ||||||||| ||| |||||    
T  39807788 aatgagaaatgatatttgaacaaccattttttacaatttttatgacaactttactctctcatactcaaattat 39807716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 41175784 - 41175708
Alignment:
Q  279 aattaatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||| |||||||||| | |||||   ||||||  |||||||||||| ||||||||| |||||||||    
T  41175784 aattaatgagaaatgatatttgaacatctattttgggataacttttgtgacaactttctctctcatactcacattat 41175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 6517709 - 6517780
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  6517709 aatgagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 6517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 11954431 - 11954498
Alignment:
Q  286 gagaaatgttatttgaacaaccatt-ttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| |||||||||||| ||| |||||||| |  |||||||||||| ||||||||| |||||||    
T  11954431 gagaaatgatatttgaacaactattgttttataatttttgtgacaactttctctctcatactcacatt 11954498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 17097873 - 17097806
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| |||||||||||||||||||| ||||||  |||||||| ||| | ||||||| |||||||    
T  17097873 gagaaatgatatttgaacaaccattttttgataacttttgtgacaattttctatctcatactcacatt 17097806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 18638896 - 18638822
Alignment:
Q  286 gagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||| ||||||||||| ||| ||||  | |||||| ||||||||||||| |||||||||||||||    
T  18638896 gagaaatgatatttgcacaaccattttattacaactttt-tgacaaatttatctctcatactcacattatattctt 18638822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 884479 - 884513
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||||||||||||| ||||||||||||    
T  884479 tgtgacaactttatctctcatactcacattatatt 884513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 1981890 - 1981948
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    |||||||| ||||||||||||||||||| |  |||  |||||||||||| |||||||||    
T  1981890 gagaaatgatatttgaacaaccatttttaaacacttttgtgacaactttctctctcata 1981948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 7287263 - 7287189
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||| ||||| ||||| |||||||||||||| | ||||  |||||||||||| ||| ||||| ||||||||||||    
T  7287263 atgataaatgatatttaaacaaccatttttttacaacttttgtgacaactttctctttcatactcacattatatt 7287189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 8920078 - 8920152
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattct 359  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| |||||| |||||||    
T  8920078 gagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacatcatattct 8920152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 26686919 - 26686953
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||| ||||||||||||||||||||||    
T  26686919 tgtgacaactttctctctcatattcacattatatt 26686953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 26956650 - 26956684
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||| ||||||||||||||||||||||    
T  26956650 tgtgacaactttctctctcatattcacattatatt 26956684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 2117658 - 2117621
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  2117658 tgtgacaactttctctctcatactcacattatattctt 2117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 354
Target Start/End: Complemental strand, 12718412 - 12718383
Alignment:
Q  325 tgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||||||||||||||||||    
T  12718412 tgacaactttatctctcatattcacattat 12718383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 16690498 - 16690571
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||| |||||||||| |||  ||||  |||||||||||| ||| ||||| ||||||||||||    
T  16690498 tgagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttctctttcatactcacattatatt 16690571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 29803266 - 29803299
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||||||||||||||||||||||    
T  29803266 acaactttctctctcatattcacattatattctt 29803299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 41460157 - 41460190
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||| |||||||||||||||    
T  41460157 acaactttatctctcatactcacattatattctt 41460190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 8686891 - 8686951
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatatt 346  Q
    ||||||||  |||||||||||||||||| |||| |  |||||||| ||||||| |||||||    
T  8686891 gagaaatgagatttgaacaaccatttttgataatttttgtgacaattttatctttcatatt 8686951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 14051387 - 14051319
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||| || |||||||||||| |  |||||||||||| ||| | ||| |||||||||    
T  14051387 gagaaatgatatttgaaaaatcattttttataatttttgtgacaactttttcttttatactcacattat 14051319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 19437298 - 19437330
Alignment:
Q  327 acaactttatctctcatattcacattatattct 359  Q
    |||||||| ||||||||||||||||||||||||    
T  19437298 acaactttctctctcatattcacattatattct 19437330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 24468357 - 24468285
Alignment:
Q  286 gagaaatgttatttgaacaaccattttt-tataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||||||||||||||||  | ||||  ||||| |||||| | ||||||| ||||||||||||    
T  24468357 gagaaatgatatttgaacaaccatttttaaacaacttttgtgataactttctatctcatactcacattatatt 24468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 35301482 - 35301510
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttt 313  Q
    |||||||||||||||||||||||||||||    
T  35301482 tgagaaatgttatttgaacaaccattttt 35301510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 25811912 - 25811841
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  25811912 aatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 25811841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 34047385 - 34047455
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  34047385 atgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 34047455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 552793 - 552861
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| ||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  552793 gagaaatgatatttgaacaaacattttttacaacttatgtgacaactttgtctctcatattcacattat 552861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 22079634 - 22079566
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||| | |||||||||    
T  22079634 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcacactcacattat 22079566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 5570403 - 5570333
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||| ||||||||||||||||||||| || |  |||||||| ||| ||||||||| ||||||||||||    
T  5570403 agaaatgatatttgaacaaccattttttacaatttttgtgacaattttctctctcatactcacattatatt 5570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 11635609 - 11635539
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||||||| ||||||||||| |||||||| | ||||  |||||||||||| |||||||||||||||||    
T  11635609 aatgagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacatt 11635539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 8505845 - 8505776
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| |||||||| | ||||  |||||||||||| |||||||||||||||||||    
T  8505845 gagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacattat 8505776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 8098667 - 8098602
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||||| ||||||||||||||||||||| ||||  |||||||||||  ||||||||| |||||||    
T  8098667 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactt--tctctcatactcacatt 8098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 31077791 - 31077851
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    |||||||||| ||||||||||| |||||||||||| |  |||||||||||| |||||||||    
T  31077791 atgagaaatgatatttgaacaatcattttttataaattttgtgacaactttctctctcata 31077851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 5080635 - 5080570
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| |||||||||||||| |||||| ||||  |||||||||||| ||| ||||| |||||||||    
T  5080635 aaatgatatttgaacaaccactttttacaacttttgtgacaactttctctttcatactcacattat 5080570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 17551450 - 17551381
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| | ||||  ||| |||||||| ||||||||| |||||||||    
T  17551450 gagaaatgatatttgaacaaccattttttgacaacttttgtaacaactttctctctcatactcacattat 17551381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 355
Target Start/End: Complemental strand, 5522671 - 5522639
Alignment:
Q  323 tgtgacaactttatctctcatattcacattata 355  Q
    |||||||||||||||||||||||||||||||||    
T  5522671 tgtgacaactttatctctcatattcacattata 5522639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 5694222 - 5694154
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||| |||||||||||| || |  ||||| || ||||| |||||||||||||||||    
T  5694222 gagaaatgatatttgaataaccattttttacaatttttgtgataattttatttctcatattcacattat 5694154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 8645309 - 8645377
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||  ||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  8645309 gagaaatgatatttgaacaacactttttgacaacttttgtgacaactttctctctcatactcacattat 8645377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 24900776 - 24900845
Alignment:
Q  287 agaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||| |||||||||||||||||||| | ||||  |||||||||||  ||| ||||||||||||||||||    
T  24900776 agaaatgatatttgaacaaccattttttgacaacttttgtgacaactt--tctttcatattcacattatatt 24900845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 32459588 - 32459520
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||||||||||||    
T  32459588 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatattcacatta 32459520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 9189015 - 9188941
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||| ||||||||||||||  ||||  |  ||||||||||||||||||| |||||||||||||||    
T  9189015 gagaaatgatatttgtacaaccattttttaacaactttta-gacaactttatctctcatactcacattatattctt 9188941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 14817932 - 14817995
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcac 349  Q
    |||||||| |||||||||||| |||||||| || |  |||||||||||| ||||||||| ||||    
T  14817932 gagaaatgatatttgaacaactattttttacaatttttgtgacaactttctctctcatactcac 14817995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 18737627 - 18737592
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataact 320  Q
    ||||||||| ||||||||||||||||||||||||||    
T  18737627 tgagaaatgatatttgaacaaccattttttataact 18737592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 15318259 - 15318190
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||| ||||||| | | ||||  ||| |||||||| |||||||||||||||||||    
T  15318259 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatattcacattat 15318190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 33712318 - 33712379
Alignment:
Q  284 atgagaaatgttatttgaacaacca-ttttttataactcctgtgacaactttatctctcata 344  Q
    |||||||||| |||||||||||||| ||||| | ||||  |||||||||||| |||||||||    
T  33712318 atgagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 33712379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 2242093 - 2242025
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| ||||||||||| |||||||| | || |  |||||||||||| ||||||||| ||||||||    
T  2242093 gagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacatta 2242025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 16337994 - 16337922
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||| | ||||||||||| || |||||  ||| |||||||| ||||||||| ||||||||||||    
T  16337994 gagaaatgatattggtacaaccattttataataacttttgtaacaactttctctctcatactcacattatatt 16337922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 20822939 - 20822871
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  20822939 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 20822871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 32316999 - 32316931
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| |||||||| ||||   |||||| |||| ||| ||||| |||||||||    
T  32316999 gagaaatgatatttgaacaactattttttacaactttagtgacagctttctctttcatactcacattat 32316931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 32444402 - 32444434
Alignment:
Q  323 tgtgacaactttatctctcatattcacattata 355  Q
    |||||||||||||||||||||| ||||||||||    
T  32444402 tgtgacaactttatctctcatactcacattata 32444434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 33430427 - 33430379
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaacttt 334  Q
    |||||||| || |||||||||||||||||||||||  || |||||||||    
T  33430427 gagaaatgataattgaacaaccattttttataacttttgcgacaacttt 33430379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 354
Target Start/End: Original strand, 46634093 - 46634168
Alignment:
Q  279 aattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||||    
T  46634093 aattattgagaaatgatatttgaacaatcattttttacaacttttgtgacaactttatctctcatactcacattat 46634168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 37060315 - 37060389
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||| |||||||||||||||||||||||||| | ||||  |||||||||||| ||||||||||||||||||||||    
T  37060315 atgaaaaatgttatttgaacaaccattttttgacaacttttgtgacaactttctctctcatattcacattatatt 37060389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 5622456 - 5622526
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||| ||||| |||||||||    
T  5622456 atgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctttcatactcacattat 5622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 10250586 - 10250518
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| |||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  10250586 gagaaatgatatttgaacaactattttttacaacttttgtgacaactttctctctcatactcacattat 10250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 23369403 - 23369335
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| |||||| || |||||||||    
T  23369403 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcttactcacattat 23369335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 37297049 - 37297117
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||| ||| ||||||||| |||||||||    
T  37297049 gagaaatgatatttgaacaaccattttttacaacttttgtgacaattttctctctcatactcacattat 37297117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 43174984 - 43175052
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  ||||| |||||| ||||||||| |||||||||    
T  43174984 gagaaatgatatttgaacaaccattttttacaacttttgtgataactttctctctcatactcacattat 43175052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 37997255 - 37997322
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||| ||||  |||||||||||  ||||||||| |||||||||    
T  37997255 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaactt--tctctcatactcacattat 37997322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 26732224 - 26732293
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||| |||| ||||||||||||||||||| | ||||   ||||||||||||||||||||| |||||||||    
T  26732224 tgaggaatgatatttgaacaaccatttttcacaactttagtgacaactttatctctcatactcacattat 26732293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 27051157 - 27051089
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||| |||||||||||||||||| |  ||||| |||||| ||||||||| |||||||||    
T  27051157 gagaaatgatatttaaacaaccattttttataatttttgtgataactttctctctcatactcacattat 27051089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 29531676 - 29531609
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| ||| |||||    
T  29531676 gagaaatgatatttgaacaaccattttttacaact-ttgtgacaactttctctctcatactcatattat 29531609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 40348794 - 40348862
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| |||||||||||| |  |||||||| ||| ||||||||| |||||||||    
T  40348794 gagaaatgatatttgaacaatcattttttataatttttgtgacaattttctctctcatactcacattat 40348862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 46212970 - 46213038
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||| || |||||||||    
T  46212970 gagaaatgatatttgaacaactattttttataatttttgtgacaactttttctctcgtactcacattat 46213038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 51986042 - 51986110
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||  |||||||||||||  | |||||||||| ||||||||| |||||||||    
T  51986042 gagaaatgatatttgaacaattattttttataacttttatgacaactttctctctcatactcacattat 51986110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 2268577 - 2268510
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| |||||||||| |||||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  2268577 agaaatgatatttgaacatccatttttaacaacttttgtgacaactttctctctcatactcacattat 2268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 27354424 - 27354357
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| ||||||||||| ||||||| ||||||  | ||| |||||||||||||||| |||||||||    
T  27354424 agaaatgatatttgaacaatcatttttgataacttttatgataactttatctctcatactcacattat 27354357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 50890144 - 50890073
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||| |||||| | ||||  |||||||||||| ||||||||| ||||||||||||    
T  50890144 gagaaatgatatttgtacaactatttttgacaacttttgtgacaactttctctctcatactcacattatatt 50890073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 55609236 - 55609169
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||| ||||||||||| || ||||  |||||||||||| ||||||||| ||||||||    
T  55609236 gagaaatgatatttgtacaaccattttgtacaacttttgtgacaactttctctctcatactcacatta 55609169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 1796055 - 1795981
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| |||||| ||||| ||||||||  ||||  ||||| |||||||||||||||| ||||||||||||    
T  1796055 atgagaaatgatatttgtacaacaattttttaacaacttttgtgataactttatctctcatactcacattatatt 1795981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 44539736 - 44539794
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    |||||||| |||||||||||||||||||||||| |  ||||| |||||| |||||||||    
T  44539736 gagaaatgatatttgaacaaccattttttataatttttgtgataactttctctctcata 44539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 51255746 - 51255812
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacat 351  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||| ||||||    
T  51255746 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 51255812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 5932835 - 5932766
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||| ||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  5932835 gagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatactcacattat 5932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 26910194 - 26910270
Alignment:
Q  277 ttaattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||  |||||||| |||||||| |||||||||||| ||||  |||||||||||| |||||| |||||| |||||    
T  26910194 ttaattatagagaaatgatatttgaa-aaccattttttacaacttttgtgacaactttctctctcgtattcatattat 26910270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 39158105 - 39158174
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| |||||||| |||| |  |||||||||||| ||||||||| |||||||||    
T  39158105 gagaaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactcacattat 39158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 26725040 - 26724972
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||  |||||||||||||  |||||||||||| |||||| || |||| ||||    
T  26725040 gagaaatgatatttgaacaattattttttataacttttgtgacaactttttctctcttactcacgttat 26724972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 29175227 - 29175295
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||| ||||||| ||||||||| || |  |||||||||||| ||||||||| |||||||||    
T  29175227 gagaaatgatatatgaacaatcattttttacaatttttgtgacaactttttctctcatactcacattat 29175295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 36177906 - 36177974
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||  ||| ||| ||||||||| |||||||||    
T  36177906 gagaaatgatatttgaacaaccattttttacaacttttgtcgcaattttctctctcatactcacattat 36177974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 38134353 - 38134421
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| || |  |||||||||||| | ||||||| | |||||||    
T  38134353 gagaaatgatatttgaacaaccattttttacaatttttgtgacaactttctttctcatacttacattat 38134421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 39440482 - 39440550
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||| || ||| ||| ||||| |||||||    
T  39440482 atgagaaatgatatttgaacaaccattttttacaacttttgtgataattttctctttcatactcacatt 39440550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 39478435 - 39478503
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||| |||||||| |||||||| ||||  |||||||||||| ||||||||| ||| |||||    
T  39478435 gagaaatgatatatgaacaactattttttacaacttttgtgacaactttctctctcatactcatattat 39478503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 149558 - 149487
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| ||||||||||| || ||||| |||| |  |||||||||||| ||||||||| |||||||||    
T  149558 atgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacattat 149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 2401611 - 2401682
Alignment:
Q  287 agaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||| |||||||||| ||||||| | | ||||  |||||||||||||||||||||| |||||| |||||    
T  2401611 agaaatgatatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactcacatcatatt 2401682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 31641633 - 31641565
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||| |||||||||||| ||||||||  |||  |||||||||||| ||||||| | ||||||||||||    
T  31641633 agaaatgatatttgaacaactatttttta--acttttgtgacaactttctctctcacactcacattatatt 31641565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 11068689 - 11068756
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| | ||||||||||| ||||||||| ||||  | |||||||||  |||||||||||||||||||    
T  11068689 tgagaaacgatatttgaacaatcattttttacaacttttttgacaactt--tctctcatattcacattat 11068756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 2738339 - 2738270
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| |||||||| | || |  ||||| |||||| |||||||||||||||||||    
T  2738339 gagaaatgatatttgaacaatcattttttgacaatttttgtgataactttctctctcatattcacattat 2738270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 32012894 - 32012955
Alignment:
Q  284 atgagaaatgttatttgaacaacc-attttttataactcctgtgacaactttatctctcata 344  Q
    |||||||||| ||||||||||||| |||||| | ||||  |||||||||||| |||||||||    
T  32012894 atgagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttctctctcata 32012955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 38376559 - 38376494
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||||||||||| ||||||||| || |  | |||||||||| ||||| |||||||||||||    
T  38376559 aaatgatatttgaacaatcattttttacaatttttttgacaactttttctctaatattcacattat 38376494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 39731956 - 39731903
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctct 340  Q
    ||||||| |||||| ||||||||||||||||| |  |||||||||| |||||||    
T  39731956 agaaatgatatttggacaaccattttttataatttttgtgacaactctatctct 39731903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 50506393 - 50506462
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| |||| |  || || || ||| |||||||||||||||||||    
T  50506393 gagaaatgatatttgaacaaccattttttgataatttttgagataattttctctctcatattcacattat 50506462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 27964987 - 27965055
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| ||||||||  |||  |||||||||||| | | ||||| |||||||||    
T  27964987 gagaaatgatatttgaacaactattttttacgacttttgtgacaactttttatttcatactcacattat 27965055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 45082981 - 45083049
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||| | ||||  ||||| || ||| ||||||||| ||| |||||    
T  45082981 gagaaatgatatttgaacaaccatttttgacaacttttgtgataattttctctctcatactcaaattat 45083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 50721816 - 50721744
Alignment:
Q  286 gagaaatgttatttgaacaacc-attttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| ||||||||||||| |||||| | ||||  ||||| |||||| ||| ||||| ||||||||||||    
T  50721816 gagaaatgatatttgaacaaccaatttttgacaacttttgtgataactttctctttcatactcacattatatt 50721744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 37685328 - 37685399
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  37685328 aatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 37685399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 37700190 - 37700119
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  37700190 aatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 37700119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 23645408 - 23645479
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| |||||| |||||||||||||| ||||  | |||||||||||||||||||| |||||||||    
T  23645408 aatgagaaatgatatttggacaaccattttttacaacttttttgacaactttatctctcatactcacattat 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 47642679 - 47642609
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| |||||||||||||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  47642679 tgagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacattat 47642609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 8350267 - 8350202
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| ||||||    
T  8350267 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 8350202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 30735361 - 30735296
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  30735361 aaatgatatttgaacaaccattttttacaacttttgtgacaactttttctctcatactcacattat 30735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 31088176 - 31088249
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||| |||||||  ||||||||||||||||||||||||||  ||||| |||||| ||||||||| |||||||||    
T  31088176 ttaaagagaaataatatttgaacaaccattttttataacttttgtgataactttttctctcatactcacattat 31088249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 37275105 - 37275036
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||||||||  ||||| |||||| ||| ||||| |||||||||    
T  37275105 tgagaaatgatatttgaacaaccattttttataacttttgtgataactttctctttcatactcacattat 37275036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 33100808 - 33100876
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  | |||||||||| ||||||||| |||||||||    
T  33100808 gagaaatgatatttgaacaaccattttttacaacttttttgacaactttctctctcatactcacattat 33100876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 37619544 - 37619612
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||| |||||||||||| ||||||  |||||||||||| ||||||||| |||||||||    
T  37619544 gagaaatgatatttggacaaccatttttgataacttttgtgacaactttctctctcatactcacattat 37619612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 4213072 - 4213139
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| |||||||||||||||||||| ||||||  |||||||||||| ||||||||| |||||||    
T  4213072 gagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacatt 4213139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 41677395 - 41677324
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| ||||||||||| |||||||||||| | ||||||||||| | ||| ||||| ||||||||||||    
T  41677395 gagaaatgatatttgaacaatcattttttataatttctgtgacaactgtctctttcatactcacattatatt 41677324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 649768 - 649837
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttctctctcatactcacattat 649837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 9567032 - 9566963
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  9567032 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacattat 9566963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 27465128 - 27465063
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    |||||||| ||||| ||||||||||||||| ||||  |||||||||||| ||||||||| ||||||    
T  27465128 gagaaatgatatttaaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 27465063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 29359642 - 29359707
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||||||||||| ||||||||||||||  ||| |||||||| ||||||||| |||||||||    
T  29359642 aaatgatatttgaacaatcattttttataacttttgtaacaactttctctctcatactcacattat 29359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 49931552 - 49931625
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||| |||| |||||||||  ||||  |||||||||||| ||||||||||||||||||||||    
T  49931552 tgagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatattcacattatatt 49931625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 2571635 - 2571702
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  ||||||||| || ||||||||| |||||||||    
T  2571635 gagaaatgatatttgaacaaccattttttacaacttttgtgacaac-ttctctctcatagtcacattat 2571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 15470131 - 15470059
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| ||||| |||||||||||||| ||||||  | |||||||||| ||||||||| |||||||||    
T  15470131 aatgagaaatgatattttaacaaccatttttttataacttttttgacaactttctctctcatactcacattat 15470059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 346
Target Start/End: Complemental strand, 37985457 - 37985397
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatatt 346  Q
    |||||||||| |||||||||||||||||||||| |  ||||||||||||  ||||||||||    
T  37985457 gagaaatgttttttgaacaaccattttttataatttttgtgacaactttcactctcatatt 37985397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 48983744 - 48983673
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacat 351  Q
    |||| |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||| ||||||    
T  48983744 ttaaagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 48983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 49020478 - 49020403
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||||| |||||| ||||||||||||| | ||||  |||||||| ||| ||||||||| ||||||||||||    
T  49020478 aatgagaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcatactcacattatatt 49020403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 35369700 - 35369766
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| ||||||||||| ||||||||| ||||  |||||||||||| | ||||||| |||||||    
T  35369700 gagaaatgatatttgaacaatcattttttacaacttttgtgacaactttctatctcatactcacatt 35369766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 45333570 - 45333628
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    |||||||| ||||||||||| ||||||||| ||||  |||||||||||| |||||||||    
T  45333570 gagaaatgatatttgaacaatcattttttacaacttttgtgacaactttctctctcata 45333628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 3159375 - 3159424
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaacttt 334  Q
    ||||||||| ||||||||||||||||||||| ||||  ||||||||||||    
T  3159375 tgagaaatgatatttgaacaaccattttttacaacttttgtgacaacttt 3159424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 3982102 - 3982045
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcat 343  Q
    |||||||| ||||||||||||| ||||||| ||||  |||||||||||| ||||||||    
T  3982102 gagaaatgatatttgaacaacctttttttacaacttttgtgacaactttctctctcat 3982045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 40861328 - 40861263
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| |||||||||||| | ||||||||| |  ||||| || |||||||||||||||||||||||    
T  40861328 aaatgatatttgaacaactactttttataatttttgtgataattttatctctcatattcacattat 40861263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 48858823 - 48858892
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||| ||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  48858823 gagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatactcacattat 48858892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 9987951 - 9988023
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||||||||||| ||||| | ||||  |||||||||||| ||| ||||| ||||||||||||    
T  9987951 gagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttctctttcatactcacattatatt 9988023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 34254422 - 34254354
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| ||||||||||  |||||| | | |||| ||||||||||||||||||||||| ||||||||    
T  34254422 gagaaatgatatttgaacattcattttatgacaacttctgtgacaactttatctctcatactcacatta 34254354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 50118928 - 50118896
Alignment:
Q  325 tgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||||||||||||||||||||||||    
T  50118928 tgacaactttatctctcatattcacattatatt 50118896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 3851179 - 3851226
Alignment:
Q  307 cattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||  |||||||||||| ||||||||| |||||||||    
T  3851179 cattttttataacttttgtgacaactttctctctcatactcacattat 3851226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 12489613 - 12489578
Alignment:
Q  325 tgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||| |||||||||||||||||||||||||    
T  12489613 tgacaactttctctctcatattcacattatattctt 12489578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 27352630 - 27352704
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||| ||||||||||| | ||||||  || ||||||||| ||||||||| |||||||||||||||    
T  27352630 gagaaatgatatttgtacaaccattttgtgataacttttg-gacaactttctctctcatactcacattatattctt 27352704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 37139994 - 37139927
Alignment:
Q  286 gagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||||||||||||||||| ||||| | |||| || | |||||| ||| |||||||||||||||||    
T  37139994 gagaaatgttatttgaacaactattttatgataattcttatgacaattttctctctcatattcacatt 37139927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 5771820 - 5771750
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||| || ||||| |||| |  |||||||||||| ||||||||| |||||||||    
T  5771820 tgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacattat 5771750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 15083121 - 15083063
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    |||||||| ||||||||||||||||||| | ||||  |||||||| ||| |||||||||    
T  15083121 gagaaatgatatttgaacaaccatttttgacaacttttgtgacaattttctctctcata 15083063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 25702246 - 25702212
Alignment:
Q  326 gacaactttatctctcatattcacattatattctt 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  25702246 gacaactttatctctcatactcacattatattctt 25702212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 27687553 - 27687519
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||||||||||||| ||||||||||||    
T  27687553 tgtgacaactttatctctcatactcacattatatt 27687519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 32960386 - 32960420
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||| ||||||||||||||||||||||    
T  32960386 tgtgacaactttctctctcatattcacattatatt 32960420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 49570034 - 49570068
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||| ||||||||||||||||||||||    
T  49570034 tgtgacaactttctctctcatattcacattatatt 49570068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 50932305 - 50932371
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||||| |||||||| ||  |||||||||||||  |||||||| ||| ||||||||| ||||||    
T  50932305 tgagaaatgatatttgaataataattttttataacttttgtgacaattttttctctcatactcacat 50932371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 51168799 - 51168765
Alignment:
Q  326 gacaactttatctctcatattcacattatattctt 360  Q
    ||||||||| |||||||||||||||||||||||||    
T  51168799 gacaactttttctctcatattcacattatattctt 51168765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 355
Target Start/End: Original strand, 2362353 - 2362425
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattata 355  Q
    ||||||||||| |||||| |||| || ||||| ||||||  |||||||||||||||||||||| ||| ||||||    
T  2362353 aatgagaaatgatatttgtacaatcactttttgataactt-tgtgacaactttatctctcatactcatattata 2362425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 3826845 - 3826812
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||||||||||||| |||||    
T  3826845 acaactttatctctcatattcacattatcttctt 3826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 18434810 - 18434863
Alignment:
Q  301 aacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||| | ||||  |||||||||||| ||||||| |||||||||||    
T  18434810 aacaaccatttttgacaacttttgtgacaactttctctctcacattcacattat 18434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 19947814 - 19947757
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctct 340  Q
    |||||||||| |||||||||||||||||||| | ||||  |||||||||||| |||||    
T  19947814 atgagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctct 19947757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 23554792 - 23554825
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||| |||||||||||||||    
T  23554792 acaactttatctctcatactcacattatattctt 23554825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 40596088 - 40596051
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  40596088 tgtgacaactttctctctcatactcacattatattctt 40596051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 52362482 - 52362551
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| |||||||||    
T  52362482 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattat 52362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 3919299 - 3919374
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||| |||||| ||||||||||| |||||| |  || ||||||||| ||||||||| || ||||||||||||    
T  3919299 tgagaaatgatatttgtacaaccattttgttataatttttg-gacaactttctctctcatactcgcattatattctt 3919374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 10890117 - 10890049
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  10890117 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 10890049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 12657222 - 12657290
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| ||||||||| || |  || || |||||| ||||||||| |||||||||    
T  12657222 gagaaatgatatttgaacaatcattttttacaatttttgagataactttctctctcatactcacattat 12657290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 13489662 - 13489730
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  13489662 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 13489730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 15705133 - 15705065
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  15705133 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 15705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 30535991 - 30536063
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| |||| |||||||||  || |  |||||||||||| ||||||||| ||||||||||||    
T  30535991 gagaaatgatatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactcacattatatt 30536063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 45470872 - 45470840
Alignment:
Q  325 tgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| ||||||||||||||||||||||    
T  45470872 tgacaactttctctctcatattcacattatatt 45470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 357
Target Start/End: Complemental strand, 49647177 - 49647149
Alignment:
Q  329 aactttatctctcatattcacattatatt 357  Q
    |||||||||||||||||||||||||||||    
T  49647177 aactttatctctcatattcacattatatt 49647149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 50726319 - 50726251
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||| |||||| |||||||| ||||   ||||||||||| ||||||| ||| |||||||    
T  50726319 gagaaatgatatttcaacaactattttttacaactttagtgacaactttctctctcacatttacattat 50726251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 357
Target Start/End: Original strand, 52437510 - 52437566
Alignment:
Q  302 acaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||||| ||| |  |||||||||||| ||||||||| ||||||||||||    
T  52437510 acaaccattttttaataatttttgtgacaactttctctctcatactcacattatatt 52437566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 26014810 - 26014880
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  26014810 atgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 26014880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 288 - 354
Target Start/End: Original strand, 33939238 - 33939304
Alignment:
Q  288 gaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||| |||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||    
T  33939238 gaaatgatatttgaacaaccattttttataatttttgtgacaactttctctctcatattcacattat 33939304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 41308926 - 41308996
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||| ||| ||||||||    
T  41308926 agaaatgatatttgaacaaccattttttataacttttgtgacaactttctctctcatactcatattatatt 41308996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 37302544 - 37302613
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||||| ||||| ||||||||||||||| ||||  |||||||||||| ||||||||||||||||||    
T  37302544 atgagaaatgatattttaacaaccattttttacaacttttgtgacaactttctctctcatattcacatta 37302613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 46623907 - 46623975
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||    
T  46623907 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctgatattcacattat 46623975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 5244229 - 5244297
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||| ||||| ||||  |||||||||||| ||||||||| |||||||||    
T  5244229 gagaaatgatatttgaacaaccatattttacaacttttgtgacaactttctctctcatactcacattat 5244297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 36671085 - 36671017
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| || |  |||||||||||| ||||||||| |||||||||    
T  36671085 gagaaatgatatttgaacaaccattttttacaatttttgtgacaactttttctctcatactcacattat 36671017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 38926628 - 38926696
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| |||   |||||||||||| ||||||||| |||||||||    
T  38926628 gagaaatgatatttgaacaaccattttttacaacgtttgtgacaactttctctctcatactcacattat 38926696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 47472330 - 47472397
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| ||| |||||    
T  47472330 agaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcatattat 47472397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 26550237 - 26550307
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattata 355  Q
    |||||||| |||||| |||||||||||||| ||| |  |||||||||||| ||||||||||||||||||||    
T  26550237 gagaaatgatatttgcacaaccattttttaataatttttgtgacaactttctctctcatattcacattata 26550307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 288725 - 288794
Alignment:
Q  286 gagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| ||||| ||||||||  |||||||||||| ||||||||| |||||||||    
T  288725 gagaaatgatatttgaacaacaatttttttataacttttgtgacaactttctctctcatactcacattat 288794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 52326010 - 52326087
Alignment:
Q  277 ttaattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| || |||||||| |||||||| |||||||||||| ||||  |||||||||||| ||||||||  |||||||||    
T  52326010 ttaataaaggagaaatgatatttgaataaccattttttacaacttttgtgacaactttctctctcatgctcacattat 52326087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 27541573 - 27541505
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||   ||||||| ||| ||||||||| |||||||||    
T  27541573 gagaaatgatatttgaacaaccattttttacaactttagtgacaattttctctctcatactcacattat 27541505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 37503819 - 37503751
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||||||| |||||||| || |||||||||||| |  |||||||||||||||| ||||| ||||||||    
T  37503819 tgagaaatgatatttgaataatcattttttataatttttgtgacaactttatctttcatactcacatta 37503751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 38671616 - 38671684
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||| ||| |||||| || |||||||    
T  38671616 atgagaaatgatatttgaacaaccattttttataatttttgtgacaattttctctctcgtactcacatt 38671684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 9862533 - 9862600
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||||| |||||    
T  9862533 gagaaatgatatttgaacaaccattttttgtcaacttttgtgacaactttctctctcatattaacatt 9862600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 16479632 - 16479699
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||| ||||||||||| || ||||  |||||||||||| ||||||||| ||||||||    
T  16479632 gagaaatgatatttgtacaaccattttgtacaacttttgtgacaactttctctctcatactcacatta 16479699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 34064163 - 34064108
Alignment:
Q  299 tgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||| ||||||  ||| |||||||||||||||||| |||||||||    
T  34064163 tgaacaaccatttttaataacttttgtaacaactttatctctcatactcacattat 34064108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 44413990 - 44413923
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| ||| |||||||| |||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  44413990 agaaatgatatatgaacaacaattttttacaacttttgtgacaactttctctctcatactcacattat 44413923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 354
Target Start/End: Complemental strand, 45711508 - 45711442
Alignment:
Q  288 gaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||| |||||||||||| |||||||| ||||  |||||||| ||| ||||||||| |||||||||    
T  45711508 gaaatgatatttgaacaacaattttttacaacttttgtgacaattttctctctcatactcacattat 45711442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 52939653 - 52939716
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||  ||||||||| ||||||    
T  52939653 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactt--tctctcatactcacat 52939716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 16969638 - 16969569
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||| ||||||||||||| | ||||  | |||||||||| ||||||||| |||||||||    
T  16969638 tgagaaatgatattttaacaaccatttttgacaacttttttgacaactttctctctcatactcacattat 16969569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 27168753 - 27168684
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||| |||| |  |||||||||||| ||||||||| ||| |||||    
T  27168753 gagaaatgatatttgaacaaccattttttaataatttttgtgacaactttctctctcatactcatattat 27168684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 41505494 - 41505559
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| |||||||||||  |||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  41505494 aaatgatatttgaacaattattttttacaacttttgtgacaactttctctctcatactcacattat 41505559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 42357150 - 42357088
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||||  ||||||||| ||||||    
T  42357150 agaaatgatatttgaacaaccattttttacaacttttgtgacaactt--tctctcatactcacat 42357088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 52254212 - 52254151
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    ||||||||||| |||||||||||||||| |||| ||||  | |||||||||| |||||||||    
T  52254212 aatgagaaatgatatttgaacaaccattgtttacaacttttatgacaactttctctctcata 52254151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 3648587 - 3648651
Alignment:
Q  294 ttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||||||||||||| | ||||||  |||||||| ||| ||||||||||||||||| ||||    
T  3648587 ttatttgaacaaccattttatgataacttttgtgacaattttctctctcatattcacattgtatt 3648651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 5114078 - 5114146
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| || |  | |||||||||| ||||||| | |||||||||    
T  5114078 gagaaatgatatttgaacaaccattttttacaatttttttgacaactttctctctcacactcacattat 5114146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 6178500 - 6178428
Alignment:
Q  282 taatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||||| |||||| ||||| |||||| | ||||  |||||||| ||| ||||||||| |||||||||    
T  6178500 taatgagaaatgatatttgtacaactatttttgacaacttttgtgacaattttctctctcatactcacattat 6178428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 9027608 - 9027687
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccattttt-tataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||| ||||||||||||||| |||||||||||| || ||||  ||| |||||||||||||| ||| ||||||||| |||||    
T  9027608 ttaaagagaaatgttatttgtacaaccatttttatacaacttttgt-acaactttatctctgatactcacattatcttctt 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 19150390 - 19150318
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| |||| |||||||||  ||||  |||||||||||| ||||||||||| ||||||||||    
T  19150390 gagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatatttacattatatt 19150318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 49021711 - 49021783
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||| |||||||||| |||||  |||||||||||| | ||||||| ||||||||||||    
T  49021711 gagaaatgatatttgtacatccattttttaataacttttgtgacaactttctttctcatactcacattatatt 49021783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 52963387 - 52963315
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||||||||||||  ||||  |||||||| ||| ||||||||||||| ||||||||    
T  52963387 gagaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcatattcatattatatt 52963315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 10811135 - 10811202
Alignment:
Q  286 gagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| |||||||||||||||||| | | ||||  |||||||||||| ||||||||| |||||||    
T  10811135 gagaaatgatatttgaacaaccattttatgacaacttttgtgacaactttctctctcatactcacatt 10811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 26772377 - 26772436
Alignment:
Q  295 tatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||||||||||||| || ||| |  |||||||||||| ||||||||||||||||||    
T  26772377 tatttgaacaaccattttataataatttttgtgacaactttctctctcatattcacatta 26772436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 32362933 - 32362992
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcata 344  Q
    |||||||| |||||||||||||||||||| | ||||  | ||||||||||||||||||||    
T  32362933 gagaaatgatatttgaacaaccattttttgacaacttttatgacaactttatctctcata 32362992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 35425704 - 35425669
Alignment:
Q  325 tgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||||| |||||||||||||||    
T  35425704 tgacaactttatctctcatactcacattatattctt 35425669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 35597163 - 35597230
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| ||||||||||| ||||||||| || |   ||||||||||| ||||||||| |||||||||    
T  35597163 agaaatgatatttgaacaaacattttttacaattttagtgacaactttctctctcatactcacattat 35597230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 1295329 - 1295406
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||||| |||||| ||||| ||||| | ||||||  || ||||||||| ||||||||| |||||||||||||||    
T  1295329 aatgagaaatgatatttgtacaactattttgtgataacttttg-gacaactttttctctcatactcacattatattctt 1295406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 9692724 - 9692794
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||| |||||||| ||||||| || |  ||||| |||||| |||||||||||||||||||    
T  9692724 tgagaaatggtatttaaacaaccactttttatcaatttttgtgataactttctctctcatattcacattat 9692794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 14207330 - 14207260
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| |||||||||||| ||||| ||  ||||  |||||||||||| ||||||||| |||||||||    
T  14207330 tgagaaatgatatttgaacaacgattttgtaacaacttttgtgacaactttctctctcatactcacattat 14207260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 14215078 - 14215008
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| |||||||||||| ||||| ||  ||||  |||||||||||| ||||||||| |||||||||    
T  14215078 tgagaaatgatatttgaacaacgattttgtaacaacttttgtgacaactttctctctcatactcacattat 14215008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 21196119 - 21196193
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||| |||||||| |||||||||| ||||||| | | |||| ||||||||||||| ||||||||| | |||||||    
T  21196119 ttaaagagaaatgatatttgaacatccattttgtgacaacttctgtgacaactttctctctcatacttacattat 21196193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 26668839 - 26668916
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||||  |||||| |||| |||||| ||||||||| | |||||||||| | | |||||||||||||||||||||    
T  26668839 aatgagaaataatatttgtacaatcattttattataactctt-tgacaactttttttttcatattcacattatattctt 26668916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 34058026 - 34057960
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcac 349  Q
    |||||||||| |||||||||| ||||||| | ||||||  |||||||||||| ||||||||| ||||    
T  34058026 atgagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcac 34057960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 353
Target Start/End: Original strand, 44855954 - 44856020
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||||| |||||||| ||| |||||||| ||||  |||||||||||| || |||||| ||||||||    
T  44855954 agaaatgatatttgaataacaattttttacaacttttgtgacaactttctcactcatactcacatta 44856020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 3347193 - 3347124
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||| ||||||| | ||||||  ||  |||||||| |||||||||||||||||||    
T  3347193 gagaaatgatatttgaacatccattttgtgataacttttgctacaactttctctctcatattcacattat 3347124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 24095477 - 24095408
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||| ||||||| | |||| |  |||||||||||| ||||||||| |||||||||    
T  24095477 gagaaatgatatttgaacatccattttatgataatttttgtgacaactttctctctcatactcacattat 24095408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 27276775 - 27276808
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||||||||||||| |||||    
T  27276775 acaactttatctctcatattcacattatcttctt 27276808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 37894319 - 37894246
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacatta 353  Q
    |||| |||||||| |||||| ||||||||||| ||  ||||  |||||||||||| ||||||||| ||||||||    
T  37894319 ttaaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacatta 37894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 48352995 - 48353068
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||| ||| ||||||||||  ||||  |||||||||||| ||||||||| ||| ||||||||    
T  48352995 tgagaaatgatatttgtacatccattttttaacaacttttgtgacaactttctctctcatactcatattatatt 48353068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 7668258 - 7668190
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| ||||||||| ||||  | |||||| ||| ||||| ||| |||||||||    
T  7668258 gagaaatgatatttgaacaatcattttttacaacttttttgacaattttctctcttatactcacattat 7668190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 8847110 - 8847178
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||  ||||| |||||||||||||||||| |  ||| | |||||| ||||||||| |||||||||    
T  8847110 gagaaataatatttaaacaaccattttttataatttttgtcataactttctctctcatactcacattat 8847178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 20548061 - 20547993
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| || |||||| ||||  |||||||| ||| ||||||||| |||| ||||    
T  20548061 gagaaatgatatttgaacaatcagtttttacaacttttgtgacaattttctctctcatactcacgttat 20547993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 32457827 - 32457752
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||| |||||| ||||||| ||||| | ||||  |||||||||||| ||||||||| |||||||||| ||||    
T  32457827 tgagaaatgatatttgtacaaccactttttgacaactt-tgtgacaactttctctctcatactcacattatactctt 32457752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 42358709 - 42358641
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||  |||||||||||||| | || |  |||||||||||| ||||||||| |||||||||    
T  42358709 gagaaatgatatacgaacaaccatttttgacaatttttgtgacaactttctctctcatactcacattat 42358641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 45293100 - 45293028
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| ||||| |||||| |||||| |  ||||  |||||||||||| ||||||||| ||||||||||||    
T  45293100 gagaaatgatatttaaacaactatttttaaacaacttttgtgacaactttctctctcatactcacattatatt 45293028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 357
Target Start/End: Complemental strand, 46815930 - 46815858
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||| |||||||  ||||| || |  | |||||| ||| ||||||||||||||||||||||    
T  46815930 tgagaaatgatatttgtacaaccacattttacaatttttttgacaattttctctctcatattcacattatatt 46815858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 55399999 - 55400067
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  55399999 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 55400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 44189382 - 44189313
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||||||||  |||| ||||||| ||||||||| |||||||||    
T  44189382 tgagaaatgatatttgaacaaccattttttataacttttgtgtcaactttctctctcatactcacattat 44189313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 30941386 - 30941454
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  30941386 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 30941454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 13152593 - 13152661
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  13152593 gagaaatgatatttgaacaaccatttttgacaacttttgtgacaactttctctctcatactcacattat 13152661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 44895643 - 44895575
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| | |||||||||||| ||||    
T  44895643 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctatctcatattcacgttat 44895575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 360
Target Start/End: Original strand, 17500695 - 17500771
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||| |||||| ||||||| ||| ||||||||  | |||||||||||||||||||| |||||||||||||||    
T  17500695 atgagaaatgatatttgtacaaccactttattataactttt-tgacaactttatctctcatactcacattatattctt 17500771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 360
Target Start/End: Complemental strand, 17552519 - 17552443
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||| |||||| ||||||| ||| ||||||||  | |||||||||||||||||||| |||||||||||||||    
T  17552519 atgagaaatgatatttgtacaaccactttattataactttt-tgacaactttatctctcatactcacattatattctt 17552443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 32529932 - 32529863
Alignment:
Q  279 aattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattca 348  Q
    |||||| || ||||| |||||||||||| |||||||||||||  ||| |||||||| |||||||||||||    
T  32529932 aattaaagataaatgatatttgaacaactattttttataacttttgtaacaactttctctctcatattca 32529863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 41189614 - 41189546
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||| |||||||||||||||||||| |  |||||||||||| | ||||||| |||||||||    
T  41189614 gagaaatgatatatgaacaaccattttttataatttttgtgacaactttctttctcatactcacattat 41189546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 43025349 - 43025408
Alignment:
Q  295 tatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||||||||| || |  |||||||||||||||||||||| ||| |||||    
T  43025349 tatttgaacaaccattttttacaatttttgtgacaactttatctctcatactcatattat 43025408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 47448826 - 47448893
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||| |||||||    
T  47448826 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacatt 47448893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 2362662 - 2362732
Alignment:
Q  284 atgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||||| ||| ||||||||||||||||| ||||  |||||||||||| | | ||||| |||||||||    
T  2362662 atgagaaatgatatatgaacaaccattttttacaacttttgtgacaactttttatttcatactcacattat 2362732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 12007257 - 12007191
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacat 351  Q
    |||||||| |||||||||||||||||||| | ||||  |||||||||||| ||||||||| ||||||    
T  12007257 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacat 12007191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 35586844 - 35586770
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattct 359  Q
    |||||||| |||||||||| ||||||| | ||||||  |||||||||||| ||||||||| |||||| |||||||    
T  35586844 gagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacatcatattct 35586770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 37899323 - 37899397
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattct 359  Q
    |||||||| |||||||||| ||||||| | | ||||  |||||||||||||||||||||| |||||| |||||||    
T  37899323 gagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttatctctcatactcacatcatattct 37899397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 26018043 - 26018112
Alignment:
Q  289 aaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||| |||||| |||| |||||| || |||||  ||||||||| |||||||||||||||||||||||||    
T  26018043 aaatgatatttgtacaatcattttataataacttttgtgacaacattatctctcatattcacattatatt 26018112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 47012641 - 47012569
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| |||| |||||| || ||| |  |||||||| ||||||||||||||||||||||||||    
T  47012641 gagaaatgatatttgtacaatcattttctaataatttttgtgacaattttatctctcatattcacattatatt 47012569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 31398124 - 31398191
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||| ||||||||||| || ||||  ||||| |||||| ||||||||| ||||||||    
T  31398124 gagaaatgatatttgtacaaccattttatacaacttttgtgataactttctctctcatactcacatta 31398191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 31445314 - 31445389
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||||  |||||||||||||||||||| | ||||  |||||||||||| | | ||||| ||||||||||||    
T  31445314 aatgagaaatagtatttgaacaaccattttttgacaacttttgtgacaactttctttttcatactcacattatatt 31445389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 32777780 - 32777713
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcaca 350  Q
    |||||||||| |||||||||||||||||||| | ||||  | |||||||||| ||||||||| |||||    
T  32777780 atgagaaatgatatttgaacaaccattttttgacaacttttatgacaactttctctctcatactcaca 32777713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 299 - 354
Target Start/End: Original strand, 38073209 - 38073264
Alignment:
Q  299 tgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||||| ||||  |||||||||||  ||||||||| |||||||||    
T  38073209 tgaacaaccattttttacaacttttgtgacaacttactctctcatactcacattat 38073264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 25192955 - 25192901
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctct 340  Q
    |||||||| ||||||||||||||||||||| ||||  ||| |||||||| |||||    
T  25192955 gagaaatgatatttgaacaaccattttttacaacttttgtaacaactttctctct 25192901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 26123407 - 26123441
Alignment:
Q  326 gacaactttatctctcatattcacattatattctt 360  Q
    ||||||||| |||||||||||||||||||||||||    
T  26123407 gacaactttctctctcatattcacattatattctt 26123441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 38956688 - 38956621
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||| ||||||||||||||| ||||   ||||||||||  ||||||||| |||||||||    
T  38956688 tgagaaatgatatttaaacaaccattttttacaactttagtgacaactt--tctctcatactcacattat 38956621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 351
Target Start/End: Complemental strand, 29724000 - 29723932
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttttt--ataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||||| |||||||||||| |||||||  |||| |  |||||||||||| ||||||||| ||||||    
T  29724000 tgagaaatgatatttgaacaactatttttttgataatttttgtgacaactttctctctcatactcacat 29723932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 37392084 - 37392117
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||| |||||||||||||||    
T  37392084 acaactttatctctcatactcacattatattctt 37392117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 334
Target Start/End: Original strand, 38861095 - 38861144
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaacttt 334  Q
    ||||||||| ||||||||||| ||||||||| ||||  ||||||||||||    
T  38861095 tgagaaatgatatttgaacaatcattttttacaacttttgtgacaacttt 38861144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 237050 - 237082
Alignment:
Q  323 tgtgacaactttatctctcatattcacattata 355  Q
    |||||||||||||||||||||| ||||||||||    
T  237050 tgtgacaactttatctctcatactcacattata 237082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 4292425 - 4292496
Alignment:
Q  283 aatgagaaatgttatttgaacaac-cattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||||||||||||||  || ||||| ||||  ||||||||| || ||||||||| |||||||||    
T  4292425 aatgagaaatgttatttgaacaactaatattttacaacttttgtgacaac-ttctctctcatactcacattat 4292496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 23910321 - 23910253
Alignment:
Q  287 agaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| |||||| ||||||||||||| | ||||  ||||||||  || |||||||||||||||||||    
T  23910321 agaaatgatatttgtacaaccattttttgacaacttttgtgacaatattttctctcatattcacattat 23910253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 34978293 - 34978365
Alignment:
Q  283 aatgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||| ||||||||||| || ||||| | || |  |||||||||||| ||||||||| |||||||||    
T  34978293 aatgagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacattat 34978365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 38340453 - 38340385
Alignment:
Q  287 agaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| |||||| | || |||||||||  ||||  |||||||||||||||||||||| |||||||||    
T  38340453 agaaatgatatttgtaaaagcattttttaacaacttttgtgacaactttatctctcatactcacattat 38340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 41018663 - 41018735
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||||||||| ||||||  | ||||  |||||||||||| | ||||||| ||||||||||||    
T  41018663 gagaaatgatatttgaacaactatttttggacaacttttgtgacaactttctatctcatactcacattatatt 41018735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 42584802 - 42584874
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| ||| || ||||||||||| ||  ||||  |||||||||||| ||||||||| ||||||||||||    
T  42584802 gagaaatgatatatgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacattatatt 42584874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 42598283 - 42598207
Alignment:
Q  282 taatgagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||||| |||||| ||||| ||||||||  || |  ||||| |||||||||||||||| ||| ||||||||    
T  42598283 taatgagaaatgatatttgtacaactattttttaacaatttttgtgataactttatctctcatactcatattatatt 42598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 49295 - 49363
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||||||||  | |||||||||| ||||||||| |||||||||    
T  49295 gagaaatgatatttgaacaaccattttttataacttttatgacaactttctctctcatactcacattat 49363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 18254280 - 18254212
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  18254280 gagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattat 18254212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 6511251 - 6511319
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||||| ||||   ||||||||||| ||||||||| |||||||||    
T  6511251 gagaaatgatatttgaacaaccattttttacaactttagtgacaactttctctctcatactcacattat 6511319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 9207590 - 9207658
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||| ||||||||| ||||  |||||||||||| ||||||||| |||||||||    
T  9207590 gagaaatgatatttgaacaatcattttttacaacttttgtgacaactttctctctcatactcacattat 9207658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 24766152 - 24766224
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| |||||||||||||| |||||  ||||||||||||||||| |||| ||||||||||||    
T  24766152 gagaaatgatatttgtacaaccattttttaataacttttgtgacaactttatctcgcatactcacattatatt 24766224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 41042254 - 41042322
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||||||||||||||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  41042254 gagaaatgatatttgaacaaccatttttaacaacttttgtgacaactttttctctcatactcacattat 41042322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 43487379 - 43487447
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||||||||||||| |  |||||||||||| ||||||||  |||||||||    
T  43487379 gagaaatgatatttgaacaaccattttttataatttttgtgacaactttctctctcatgctcacattat 43487447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 9760016 - 9760086
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataac-tcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||| ||||||||||||||||||||| ||| |  |||||||||||| ||||||||| |||||||||    
T  9760016 tgagaaatgatatttgaacaaccattttttacaactttttgtgacaactttctctctcatactcacattat 9760086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 22888893 - 22888825
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||||||| ||||||||||||||||||| | || |  |||||||||||| ||||||||| ||||||||    
T  22888893 tgagaaatgatatttgaacaaccatttttgacaatttttgtgacaactttctctctcatactcacatta 22888825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 29349510 - 29349574
Alignment:
Q  290 aatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||| ||||||||||||||||||| || |||  |||||||||||| ||||||| |||||||||||    
T  29349510 aatgatatttgaacaaccatttttgatcacttttgtgacaactttctctctcacattcacattat 29349574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 357
Target Start/End: Complemental strand, 44287512 - 44287440
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||||||||| |||||||| ||||  ||||| || ||| ||||||||| ||||||||||||    
T  44287512 tgagaaatgatatttgaacaactattttttacaacttttgtgataattttttctctcatactcacattatatt 44287440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 1052567 - 1052493
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||| ||||||||||||||  ||||  |  |||||||||||||||||||||||||||||||||||    
T  1052567 gagaaatgatatttgtacaaccattttttaacaactttta-gacaactttatctctcatattcacattatattctt 1052493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Complemental strand, 27490808 - 27490745
Alignment:
Q  279 aattaatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctca 342  Q
    |||||| |||||||| ||||||||||||||||||| | ||||  |||||||||||| |||||||    
T  27490808 aattaaagagaaatgatatttgaacaaccatttttgacaacttttgtgacaactttctctctca 27490745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 40210143 - 40210069
Alignment:
Q  282 taatgagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattata 355  Q
    |||||||||||| |||||||||||| |||||| | ||| |  |||||||||||| ||||||||| ||||||||||    
T  40210143 taatgagaaatgatatttgaacaactatttttaaataatttttgtgacaactttctctctcatactcacattata 40210069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 42421972 - 42421903
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||||||| |||| |||||||||||||||| ||||  |||||||| ||| || |||||| |||||||    
T  42421972 aatgagaaatgatattcgaacaaccattttttacaacttttgtgacaattttgtcactcatactcacatt 42421903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 9990691 - 9990759
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| | |||||| ||||  |||||||||||| ||||| ||| |||||||||    
T  9990691 gagaaatgatatttgaacaactaatttttacaacttttgtgacaactttctctcttatactcacattat 9990759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 18737945 - 18737873
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| | | ||||||||||  ||||  |||||||||||| ||||||||||||||||||||||    
T  18737945 gagaaatgatatttgtatatccattttttaacaacttttgtgacaactttctctctcatattcacattatatt 18737873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 34945160 - 34945096
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||||| ||||||||||| |||||||||||| |  | |||||||||| ||||||||| ||||||    
T  34945160 agaaatgatatttgaacaatcattttttataatttttatgacaactttctctctcatactcacat 34945096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 2308354 - 2308319
Alignment:
Q  325 tgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||||| |||||||||||||||    
T  2308354 tgacaactttatctctcatactcacattatattctt 2308319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 13711061 - 13711135
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||| ||||||| ||||| ||||||  |||||||||||| ||||||||| |||||||||| ||||    
T  13711061 gagaaatgatatttgtacaaccactttttgataactt-tgtgacaactttctctctcatactcacattatactctt 13711135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 344
Target Start/End: Complemental strand, 36193792 - 36193737
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcata 344  Q
    ||||| ||||||||||||||||||| | |||| | ||||||||||| |||||||||    
T  36193792 aaatgatatttgaacaaccatttttaacaacttcggtgacaactttctctctcata 36193737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 8848763 - 8848701
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacat 351  Q
    ||||| ||||||||||||||||||| | ||||  |||||||||||| ||||||| | ||||||    
T  8848763 aaatgatatttgaacaaccatttttgacaacttttgtgacaactttctctctcacactcacat 8848701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 12784472 - 12784398
Alignment:
Q  284 atgagaaatgttatttgaacaaccatttttta-taactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| |||||| ||||||||||| || ||| |  |||||||||||| ||||||||| |||| |||||||    
T  12784472 atgagaaatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactcacgttatatt 12784398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 354
Target Start/End: Complemental strand, 13711399 - 13711369
Alignment:
Q  324 gtgacaactttatctctcatattcacattat 354  Q
    |||||||||||||||||||||||||||||||    
T  13711399 gtgacaactttatctctcatattcacattat 13711369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 5054632 - 5054677
Alignment:
Q  309 ttttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||||||||  |||||||||||| ||||||||| |||||||||    
T  5054632 ttttttataacttttgtgacaactttttctctcatactcacattat 5054677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 6999140 - 6999071
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    ||||||||| |||||||||| ||||||| | | ||||  |||||||||||| ||||||||| ||||||||    
T  6999140 tgagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 6999071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 7498067 - 7497991
Alignment:
Q  281 ttaatgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||| |||||||| |||||| ||||||||||| ||| ||||  | |||||||||| ||||||||| ||||||||||||    
T  7498067 ttaaagagaaatgatatttgtacaaccattttattacaactttt-tgacaactttctctctcatactcacattatatt 7497991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 9449445 - 9449412
Alignment:
Q  327 acaactttatctctcatattcacattatattctt 360  Q
    |||||||| |||||||||||||||||||||||||    
T  9449445 acaactttctctctcatattcacattatattctt 9449412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 25801847 - 25801810
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  25801847 tgtgacaactttatctctcatactcacattatactctt 25801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 32944576 - 32944508
Alignment:
Q  283 aatgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||||||| |||||||||||||| | |  ||||||  |||||||||||| ||||||||| |||||||    
T  32944576 aatgagaaatgatatttgaacaaccactgtg-ataacttttgtgacaactttctctctcatagtcacatt 32944508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 36133011 - 36133048
Alignment:
Q  323 tgtgacaactttatctctcatattcacattatattctt 360  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  36133011 tgtgacaactttatctctcatactcacattatactctt 36133048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 38911997 - 38911932
Alignment:
Q  290 aatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||| |||||||||||||||||||| |||  |  |||||||||||||||| ||||||||| |||||    
T  38911997 aatgatatttgaacaaccattttttgatattttttgtgacaactttatctttcatattcatattat 38911932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 43057064 - 43057133
Alignment:
Q  286 gagaaatgttatttgaacaacca-ttttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||||| ||||| | ||||  |||||||||||| ||||| ||| |||||||||    
T  43057064 gagaaatgatatttgaacaaccactttttaacaacttttgtgacaactttctctcttatactcacattat 43057133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 357
Target Start/End: Original strand, 1040513 - 1040585
Alignment:
Q  285 tgagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattatatt 357  Q
    ||||||||| |||||| ||||||||||| | |||||  |||||||| |||  | |||||| ||||||||||||    
T  1040513 tgagaaatgatatttgtacaaccattttatttaacttttgtgacaattttcgccctcatactcacattatatt 1040585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 2464319 - 2464251
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||| ||||||  || ||||  |||||||||||| | ||||||||||| |||||    
T  2464319 gagaaatgatatttgaacatccatttgatacaacttttgtgacaactttctttctcatattcatattat 2464251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 6336252 - 6336324
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacattatatt 357  Q
    |||||||| |||||| ||||||||||| ||  ||||  |||||||||||| ||||||||| ||| ||||||||    
T  6336252 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcatattatatt 6336324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 7367869 - 7367936
Alignment:
Q  287 agaaatgttatttgaacaaccatttttt--ataactcctgtgacaactttatctctcatattcacatt 352  Q
    ||||||| ||||| ||||||||||||||  ||||||    |||||||||||||||||||| |||||||    
T  7367869 agaaatgatatttcaacaaccatttttttaataactttaatgacaactttatctctcatactcacatt 7367936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 8482264 - 8482232
Alignment:
Q  325 tgacaactttatctctcatattcacattatatt 357  Q
    |||||||||| ||||||||||||||||||||||    
T  8482264 tgacaactttctctctcatattcacattatatt 8482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 9634507 - 9634439
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatta 353  Q
    |||||||| |||||||||| ||||||| | |||| |  |||||||||||| ||||||||| ||||||||    
T  9634507 gagaaatgatatttgaacatccattttatgataatttttgtgacaactttttctctcatactcacatta 9634439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 22416213 - 22416281
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||  ||||| ||||||||||||||||||||  ||||| |||||| |||| |||| | |||||||    
T  22416213 gagaaattatatttaaacaaccattttttataacttttgtgataactttctctcccatacttacattat 22416281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 38874686 - 38874618
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| ||||| ||||||||||||| ||||||  |||||||| ||| || |||| ||||| |||||    
T  38874686 gagaaatgatatttaaacaaccatttttaataacttttgtgacaattttctccctcaaattcatattat 38874618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 366294 - 366362
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||| |||||||||||| | ||||  |||||||||||| |||||||||||||||||||    
T  366294 gagaaatgatatttgtacaaccatttttaacaacttttgtgacaactttctctctcatattcacattat 366362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 76690 - 76622
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| |||||||||||| ||||||||||| |  |||||||||||| |||||||||  ||||||||    
T  76690 gagaaatgatatttgaacaactattttttataatttttgtgacaactttctctctcatacccacattat 76622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 6591 - 6524
Alignment:
Q  286 gagaaatgttatttgaacaaccattttttat-aactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| ||||||||||| |||||||||  ||||  |||||||||||||||||||||| |||||||    
T  6591 gagaaatgatatttgaacaatcattttttaacaacttttgtgacaactttatctctcatactcacatt 6524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 60469 - 60545
Alignment:
Q  286 gagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattcttct 362  Q
    |||||||| |||||| ||||||||||| ||| ||||  | |||||||||| ||| |||||||||||||||||||||||    
T  60469 gagaaatgatatttgtacaaccattttattacaactttt-tgacaactttttctttcatattcacattatattcttct 60545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 11784 - 11849
Alignment:
Q  287 agaaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||||| ||||||||||||||||||||| || |  |||||||||||| ||||||||| | |||||||    
T  11784 agaaatgatatttgaacaaccattttttacaatt--tgtgacaactttctctctcatacttacattat 11849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 28398 - 28339
Alignment:
Q  286 gagaaatgttatttgaacaacca-ttttttataactcctgtgacaactttatctctcata 344  Q
    |||||||| |||||||||||||| ||||| ||||||  |||||||||||| |||||||||    
T  28398 gagaaatgatatttgaacaaccactttttgataacttttgtgacaactttctctctcata 28339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 101977 - 101910
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacatt 352  Q
    |||||||| ||| |||||||||||||||| | ||||  |||||||||||| ||||||||| |||||||    
T  101977 gagaaatgatatctgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacatt 101910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 8671 - 8736
Alignment:
Q  289 aaatgttatttgaacaaccattttttataactcctgtgacaactttatctctcatattcacattat 354  Q
    ||||| ||||||||||| ||||||||| ||||  |||||||||||| ||| ||||| ||| |||||    
T  8671 aaatgatatttgaacaatcattttttacaacttttgtgacaactttctctttcatactcatattat 8736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 10936 - 11005
Alignment:
Q  286 gagaaatgttatttgaacaaccatttttt-ataactcctgtgacaactttatctctcatattcacattat 354  Q
    |||||||| || ||||||||||| ||||| | ||||  |||||||||||| ||||||||| |||||||||    
T  10936 gagaaatgataattgaacaaccactttttgacaacttttgtgacaactttctctctcatactcacattat 11005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 155905 - 155980
Alignment:
Q  285 tgagaaatgttatttgaacaaccatttt-ttataactcctgtgacaactttatctctcatattcacattatattctt 360  Q
    ||||||||| |||||| ||||||||||| ||| ||||  | |||||||||| |||||| || |||||||||||||||    
T  155905 tgagaaatgatatttgtacaaccattttattacaactttt-tgacaactttctctctcgtactcacattatattctt 155980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University