View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20371_low_10 (Length: 276)

Name: NF20371_low_10
Description: NF20371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20371_low_10
NF20371_low_10
[»] chr2 (38 HSPs)
chr2 (19-268)||(41446086-41446334)
chr2 (93-214)||(41454254-41454375)
chr2 (94-194)||(42261533-42261633)
chr2 (105-194)||(24398089-24398178)
chr2 (93-194)||(36318057-36318157)
chr2 (27-194)||(2334466-2334631)
chr2 (105-232)||(33648203-33648331)
chr2 (93-194)||(6595054-6595154)
chr2 (93-194)||(11690521-11690621)
chr2 (93-182)||(30218104-30218193)
chr2 (93-161)||(38312260-38312328)
chr2 (174-224)||(28196274-28196324)
chr2 (93-159)||(33162532-33162598)
chr2 (93-194)||(723792-723892)
chr2 (27-60)||(4503313-4503346)
chr2 (27-60)||(5723435-5723468)
chr2 (93-194)||(17057417-17057517)
chr2 (93-194)||(17085400-17085500)
chr2 (93-194)||(35446932-35447032)
chr2 (93-194)||(42362372-42362472)
chr2 (27-60)||(45099709-45099742)
chr2 (93-161)||(1631812-1631880)
chr2 (93-137)||(14202509-14202553)
chr2 (93-161)||(42288190-42288258)
chr2 (30-60)||(32289530-32289560)
chr2 (30-60)||(36205844-36205874)
chr2 (30-60)||(36988256-36988286)
chr2 (27-60)||(4484511-4484544)
chr2 (93-194)||(36988124-36988224)
chr2 (93-166)||(42019948-42020021)
chr2 (93-194)||(45726949-45727049)
chr2 (93-161)||(4484411-4484479)
chr2 (93-161)||(11151671-11151739)
chr2 (27-66)||(11151765-11151805)
chr2 (93-161)||(14633906-14633974)
chr2 (94-154)||(24885682-24885742)
chr2 (93-161)||(34811302-34811370)
chr2 (98-194)||(36773587-36773682)
[»] chr4 (48 HSPs)
chr4 (94-202)||(34112838-34112946)
chr4 (93-214)||(16422634-16422755)
chr4 (93-201)||(44570406-44570514)
chr4 (95-169)||(32091500-32091574)
chr4 (93-232)||(34788782-34788923)
chr4 (27-194)||(56178685-56178850)
chr4 (93-194)||(8665428-8665528)
chr4 (93-160)||(21688269-21688336)
chr4 (95-182)||(33089900-33089987)
chr4 (93-263)||(52065617-52065787)
chr4 (93-232)||(379400-379539)
chr4 (93-194)||(6542227-6542328)
chr4 (27-194)||(9927506-9927671)
chr4 (96-194)||(26175684-26175781)
chr4 (93-202)||(5349930-5350039)
chr4 (93-194)||(12073412-12073512)
chr4 (94-194)||(12119559-12119660)
chr4 (93-194)||(48143063-48143163)
chr4 (105-169)||(26699515-26699579)
chr4 (94-166)||(27417040-27417112)
chr4 (98-169)||(22882823-22882894)
chr4 (98-169)||(22934487-22934558)
chr4 (96-194)||(33989867-33989965)
chr4 (93-161)||(4587978-4588047)
chr4 (27-60)||(13992466-13992499)
chr4 (93-194)||(24969132-24969232)
chr4 (93-194)||(36994544-36994644)
chr4 (93-194)||(54199954-54200054)
chr4 (97-161)||(50262781-50262845)
chr4 (93-161)||(52467434-52467502)
chr4 (93-161)||(54883040-54883108)
chr4 (93-161)||(55085445-55085513)
chr4 (110-169)||(6677506-6677565)
chr4 (93-232)||(38811200-38811337)
chr4 (110-169)||(53345254-53345313)
chr4 (93-194)||(2209733-2209834)
chr4 (27-194)||(37740580-37740745)
chr4 (22-59)||(55085545-55085583)
chr4 (27-60)||(5370267-5370300)
chr4 (93-194)||(6655976-6656076)
chr4 (93-194)||(12745484-12745584)
chr4 (27-60)||(29999986-30000019)
chr4 (93-194)||(34570462-34570562)
chr4 (93-194)||(40632465-40632565)
chr4 (93-161)||(26364256-26364324)
chr4 (93-161)||(46147471-46147539)
chr4 (93-137)||(47038514-47038558)
chr4 (105-169)||(48142450-48142514)
[»] chr3 (50 HSPs)
chr3 (95-231)||(25490978-25491114)
chr3 (93-206)||(24635277-24635390)
chr3 (93-194)||(46173377-46173477)
chr3 (93-161)||(20937676-20937744)
chr3 (93-161)||(46860494-46860562)
chr3 (93-191)||(54739004-54739102)
chr3 (22-60)||(5434058-5434096)
chr3 (94-191)||(8166507-8166604)
chr3 (19-60)||(4569898-4569940)
chr3 (27-194)||(7762220-7762385)
chr3 (93-194)||(32891123-32891224)
chr3 (93-194)||(49199517-49199618)
chr3 (96-194)||(54593727-54593824)
chr3 (27-60)||(5258325-5258358)
chr3 (27-60)||(5260504-5260537)
chr3 (93-169)||(5433948-5434025)
chr3 (27-60)||(7764422-7764455)
chr3 (27-60)||(9636307-9636340)
chr3 (93-194)||(22835050-22835150)
chr3 (27-60)||(23198118-23198151)
chr3 (27-60)||(23200317-23200350)
chr3 (93-194)||(29682379-29682479)
chr3 (93-194)||(30236145-30236245)
chr3 (93-194)||(34491232-34491332)
chr3 (93-182)||(35138765-35138854)
chr3 (93-194)||(40735403-40735503)
chr3 (27-60)||(45095119-45095152)
chr3 (93-161)||(5236536-5236604)
chr3 (93-206)||(7764484-7764598)
chr3 (93-161)||(31340281-31340349)
chr3 (22-114)||(25173620-25173711)
chr3 (93-194)||(760867-760967)
chr3 (93-161)||(5373252-5373321)
chr3 (93-194)||(9581302-9581402)
chr3 (93-194)||(19683937-19684037)
chr3 (27-60)||(32744607-32744640)
chr3 (93-194)||(40734518-40734618)
chr3 (93-194)||(44331565-44331665)
chr3 (93-194)||(44700526-44700626)
chr3 (93-194)||(45095183-45095283)
chr3 (93-161)||(5258224-5258292)
chr3 (93-161)||(5260403-5260471)
chr3 (93-157)||(9636210-9636274)
chr3 (93-137)||(23410433-23410477)
chr3 (94-194)||(29810889-29810988)
chr3 (93-161)||(29813083-29813151)
chr3 (93-161)||(37408478-37408546)
chr3 (93-165)||(39153437-39153509)
chr3 (93-137)||(43401906-43401950)
chr3 (93-129)||(47304271-47304307)
[»] chr7 (47 HSPs)
chr7 (93-233)||(43363480-43363622)
chr7 (93-194)||(6431991-6432091)
chr7 (93-194)||(22269993-22270093)
chr7 (94-194)||(5116625-5116725)
chr7 (93-194)||(23565109-23565210)
chr7 (93-161)||(4253609-4253678)
chr7 (93-194)||(26417336-26417436)
chr7 (93-161)||(2390302-2390370)
chr7 (93-182)||(36574575-36574665)
chr7 (93-194)||(496031-496131)
chr7 (27-60)||(4178729-4178762)
chr7 (93-194)||(4586181-4586281)
chr7 (94-194)||(18396338-18396438)
chr7 (27-60)||(23554994-23555027)
chr7 (27-60)||(24514941-24514974)
chr7 (27-60)||(25767138-25767171)
chr7 (27-60)||(29991009-29991042)
chr7 (93-194)||(30024780-30024880)
chr7 (27-161)||(35853869-35854002)
chr7 (27-60)||(39731331-39731364)
chr7 (93-166)||(43864264-43864337)
chr7 (93-194)||(47673991-47674091)
chr7 (27-60)||(48408757-48408790)
chr7 (93-194)||(48491599-48491699)
chr7 (93-161)||(2361052-2361120)
chr7 (93-165)||(4510624-4510696)
chr7 (93-165)||(4512466-4512538)
chr7 (105-161)||(22328471-22328527)
chr7 (93-161)||(27347837-27347905)
chr7 (93-161)||(29608757-29608825)
chr7 (93-161)||(31733049-31733117)
chr7 (93-161)||(48489451-48489519)
chr7 (93-161)||(48599414-48599482)
chr7 (94-161)||(4508786-4508853)
chr7 (93-232)||(8359325-8359465)
chr7 (95-161)||(1113679-1113745)
chr7 (19-60)||(4253709-4253751)
chr7 (94-138)||(5514112-5514157)
chr7 (27-60)||(19502132-19502165)
chr7 (93-194)||(23555060-23555160)
chr7 (93-157)||(13065482-13065546)
chr7 (121-169)||(23793904-23793952)
chr7 (93-157)||(31105477-31105541)
chr7 (93-161)||(31518815-31518883)
chr7 (148-184)||(40808663-40808699)
chr7 (27-66)||(41317608-41317648)
chr7 (93-161)||(47676216-47676284)
[»] chr5 (42 HSPs)
chr5 (93-202)||(10700688-10700796)
chr5 (99-268)||(32579250-32579418)
chr5 (99-202)||(30802854-30802957)
chr5 (93-194)||(3075706-3075806)
chr5 (93-169)||(316782-316858)
chr5 (99-231)||(32609561-32609693)
chr5 (93-166)||(28278336-28278409)
chr5 (141-202)||(30793204-30793265)
chr5 (93-161)||(533789-533857)
chr5 (105-169)||(13695763-13695827)
chr5 (93-161)||(16452100-16452168)
chr5 (93-161)||(33831700-33831768)
chr5 (93-161)||(38747025-38747093)
chr5 (93-184)||(14689484-14689575)
chr5 (27-194)||(13239706-13239871)
chr5 (94-184)||(35616190-35616280)
chr5 (93-194)||(213485-213585)
chr5 (27-60)||(13343015-13343048)
chr5 (93-194)||(13488223-13488323)
chr5 (27-60)||(25412716-25412749)
chr5 (27-60)||(30683101-30683134)
chr5 (95-212)||(32583312-32583429)
chr5 (27-60)||(36074225-36074258)
chr5 (93-194)||(42428478-42428578)
chr5 (93-161)||(538045-538113)
chr5 (93-169)||(3325933-3326009)
chr5 (93-161)||(39468629-39468697)
chr5 (93-161)||(42310015-42310083)
chr5 (27-194)||(32636778-32636944)
chr5 (93-191)||(10054867-10054964)
chr5 (19-60)||(13695871-13695913)
chr5 (30-60)||(16409440-16409470)
chr5 (30-60)||(26170739-26170769)
chr5 (30-60)||(26177848-26177878)
chr5 (93-161)||(16641017-16641086)
chr5 (93-194)||(25412780-25412880)
chr5 (93-161)||(27637692-27637761)
chr5 (27-60)||(30182543-30182576)
chr5 (27-60)||(37439088-37439121)
chr5 (93-194)||(40147281-40147381)
chr5 (32-60)||(9789397-9789425)
chr5 (32-60)||(18441821-18441849)
[»] chr8 (46 HSPs)
chr8 (93-182)||(19491759-19491847)
chr8 (93-194)||(40221765-40221865)
chr8 (93-194)||(30143360-30143460)
chr8 (93-194)||(32902221-32902322)
chr8 (93-161)||(1292543-1292611)
chr8 (106-194)||(7597647-7597735)
chr8 (93-137)||(10929819-10929863)
chr8 (93-161)||(18655420-18655488)
chr8 (93-161)||(27811298-27811366)
chr8 (93-161)||(42435071-42435139)
chr8 (93-187)||(41266988-41267083)
chr8 (93-194)||(40328799-40328900)
chr8 (27-60)||(1746399-1746432)
chr8 (93-194)||(4283544-4283644)
chr8 (93-194)||(4731678-4731778)
chr8 (27-60)||(17982607-17982640)
chr8 (27-60)||(19945541-19945574)
chr8 (27-60)||(31218211-31218244)
chr8 (27-60)||(34254510-34254543)
chr8 (93-194)||(42498214-42498314)
chr8 (27-60)||(44303808-44303841)
chr8 (95-166)||(1822313-1822385)
chr8 (95-166)||(1856758-1856830)
chr8 (94-169)||(3231868-3231944)
chr8 (93-161)||(3303750-3303818)
chr8 (93-161)||(4162517-4162585)
chr8 (93-161)||(12702714-12702782)
chr8 (93-161)||(15212806-15212874)
chr8 (28-60)||(42498149-42498181)
chr8 (93-155)||(6598992-6599054)
chr8 (93-155)||(6674445-6674507)
chr8 (27-57)||(12702822-12702852)
chr8 (93-194)||(30291626-30291727)
chr8 (94-196)||(30909389-30909489)
chr8 (105-182)||(10240186-10240263)
chr8 (93-194)||(18141841-18141940)
chr8 (93-194)||(33352170-33352270)
chr8 (27-60)||(34256686-34256719)
chr8 (93-161)||(1746298-1746366)
chr8 (142-194)||(3899198-3899250)
chr8 (93-161)||(11384005-11384073)
chr8 (106-166)||(11712076-11712136)
chr8 (93-161)||(31218277-31218345)
chr8 (93-137)||(41366718-41366762)
chr8 (93-137)||(43036443-43036487)
chr8 (93-161)||(44353813-44353881)
[»] chr1 (48 HSPs)
chr1 (93-194)||(22079336-22079437)
chr1 (93-182)||(41360934-41361022)
chr1 (93-198)||(16914218-16914324)
chr1 (22-212)||(1485799-1485992)
chr1 (93-200)||(4535522-4535629)
chr1 (93-187)||(25652106-25652200)
chr1 (93-232)||(47255349-47255488)
chr1 (93-169)||(3460715-3460792)
chr1 (93-194)||(11348718-11348818)
chr1 (93-194)||(13549048-13549148)
chr1 (93-233)||(12318532-12318671)
chr1 (95-191)||(10925245-10925343)
chr1 (27-194)||(28220274-28220440)
chr1 (100-194)||(6808479-6808573)
chr1 (93-194)||(7482278-7482379)
chr1 (96-194)||(9109467-9109565)
chr1 (93-194)||(37559916-37560017)
chr1 (105-166)||(928051-928112)
chr1 (93-194)||(3156885-3156985)
chr1 (93-194)||(13547137-13547237)
chr1 (93-194)||(19754515-19754615)
chr1 (27-60)||(20762626-20762659)
chr1 (93-194)||(28265602-28265702)
chr1 (93-194)||(31659258-31659358)
chr1 (93-194)||(49918370-49918470)
chr1 (93-161)||(4552717-4552785)
chr1 (93-161)||(15820327-15820395)
chr1 (93-161)||(19752706-19752774)
chr1 (105-169)||(37282764-37282828)
chr1 (93-194)||(37168317-37168418)
chr1 (93-166)||(47115191-47115265)
chr1 (27-60)||(3156820-3156853)
chr1 (27-60)||(3189285-3189318)
chr1 (27-60)||(3198102-3198135)
chr1 (27-60)||(3206941-3206974)
chr1 (93-194)||(8550835-8550935)
chr1 (174-215)||(24215148-24215189)
chr1 (93-194)||(28223469-28223569)
chr1 (93-194)||(31925755-31925855)
chr1 (93-202)||(41135840-41135949)
chr1 (93-194)||(44455180-44455280)
chr1 (27-60)||(51765349-51765382)
chr1 (93-161)||(13316432-13316500)
chr1 (93-137)||(23555369-23555413)
chr1 (93-137)||(29136267-29136311)
chr1 (93-137)||(37033177-37033221)
chr1 (93-137)||(37879015-37879059)
chr1 (93-161)||(42298055-42298123)
[»] scaffold0002 (2 HSPs)
scaffold0002 (94-194)||(490368-490468)
scaffold0002 (93-161)||(434553-434621)
[»] scaffold0053 (1 HSPs)
scaffold0053 (93-200)||(25073-25180)
[»] chr6 (28 HSPs)
chr6 (93-194)||(2972987-2973087)
chr6 (93-238)||(3808711-3808857)
chr6 (93-194)||(17758043-17758143)
chr6 (93-194)||(21588951-21589051)
chr6 (93-194)||(21593684-21593784)
chr6 (98-190)||(12221155-12221247)
chr6 (94-161)||(5043648-5043715)
chr6 (27-60)||(2171711-2171744)
chr6 (27-60)||(5406379-5406412)
chr6 (27-60)||(5410704-5410737)
chr6 (27-60)||(16452510-16452543)
chr6 (27-60)||(31404854-31404887)
chr6 (107-191)||(603139-603222)
chr6 (93-171)||(186734-186812)
chr6 (30-60)||(6097613-6097643)
chr6 (93-208)||(26830155-26830271)
chr6 (93-194)||(5406248-5406348)
chr6 (93-194)||(5410573-5410673)
chr6 (93-194)||(5413442-5413542)
chr6 (27-60)||(5413573-5413606)
chr6 (93-194)||(9183079-9183179)
chr6 (96-165)||(22615994-22616063)
chr6 (93-194)||(28137456-28137556)
chr6 (27-60)||(30834717-30834750)
chr6 (93-194)||(31404723-31404823)
chr6 (93-161)||(3038983-3039051)
chr6 (93-137)||(17763010-17763054)
chr6 (93-161)||(30834616-30834684)
[»] scaffold0466 (1 HSPs)
scaffold0466 (93-161)||(7347-7415)
[»] scaffold1519 (2 HSPs)
scaffold1519 (27-60)||(871-904)
scaffold1519 (93-161)||(936-1004)
[»] scaffold0286 (1 HSPs)
scaffold0286 (27-60)||(11512-11545)
[»] scaffold0219 (1 HSPs)
scaffold0219 (94-194)||(27490-27591)
[»] scaffold0016 (1 HSPs)
scaffold0016 (27-60)||(114557-114590)
[»] scaffold0491 (2 HSPs)
scaffold0491 (93-192)||(11211-11310)
scaffold0491 (27-60)||(11342-11375)
[»] scaffold0176 (1 HSPs)
scaffold0176 (93-166)||(18078-18151)
[»] scaffold0066 (1 HSPs)
scaffold0066 (96-161)||(20495-20560)
[»] scaffold0014 (1 HSPs)
scaffold0014 (93-137)||(80387-80431)


Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 41446086 - 41446334
Alignment:
Q  19 ggaaaacaattgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgag 118  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||       ||||||||||||||||||||||||||    
T  41446086 ggaaaacaattgtaaatac-ttggtgagtgaaaatcattgagcctcttaatcacggaaagagattcgaaaaaaaggtagaaattatgtttgttctttgag 41446184  T
Q  119 agcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagatgtctctcctccaaacgtaggttat 218  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  41446185 agcttgttgaagctaattttaagtaacccttttgtatctctttataaagaactggttgacagtgaagtggagagatgtctctcctccaaacgtaggtcat 41446284  T
Q  219 tattgggccgaactatgtgatcaaatttcagtgtgtttgtttttcttctc 268  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41446285 tattgggccgaactatgtgatcaaatttcagtgtgtttgtttctcttctc 41446334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 214
Target Start/End: Original strand, 41454254 - 41454375
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||  |||||| ||||||||||||||||| |||||||  || ||| ||||||||| | ||| ||||||| |  |||||||||||||||| ||    
T  41454254 ggtagaaattagatttgttttttgagagcttgttgaagctaatttctagcaactcttttgtatatatttgtaaagaactcattgatagtgaagtggacag 41454353  T
Q  193 atgtctctcctccaaacgtagg 214  Q
    || |||||||||| ||||||||    
T  41454354 atctctctcctcccaacgtagg 41454375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 42261633 - 42261533
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagaga 193  Q
    |||||||||| |||||||||| |||||||||||||| |||||||   ||||| ||||||||| ||||| ||||| | |  |||||||||||| |||||||    
T  42261633 gtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtgaagcggagaga 42261534  T
Q  194 t 194  Q
    |    
T  42261533 t 42261533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 24398089 - 24398178
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||||||||||| |||||||||||| |||||||   ||||||||||||||||||||| ||||||| |  |||||| || | |||||||||    
T  24398089 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagat 24398178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 36318157 - 36318057
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  36318157 ggtagaaattagggttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 36318059  T
Q  193 at 194  Q
    ||    
T  36318058 at 36318057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 2334631 - 2334466
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||||||||||||||||||||||||||||||||  ||||  |||  | | |||||| |       ||||||||| | | |||||||||| || ||||||    
T  2334631 attgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattg-gtgagattgggaaaatgggtagaaataagggttgttctttgtgaacttgtt 2334533  T
Q  127 gaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||| |||||||  |||||| ||||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  2334532 gaagctaatttctagtaactcttttgtatctctttgt-aagaactcattgatagtggattggagagat 2334466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 33648203 - 33648331
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat--gtctctcc 202  Q
    |||||||||||| |||||||||||| |||||||   ||||||||||||||| ||||| ||||||| |  ||||||| | | |||||||||   |||||||    
T  33648203 gtttgttctttgtgagcttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcc 33648302  T
Q  203 tccaaacgtaggttattattgggccgaact 232  Q
    |||| | |||||| ||| |||| |||||||    
T  33648303 tccaga-gtaggtcattgttggaccgaact 33648331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 6595154 - 6595054
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   |||||||||||| |||||||| | ||||| | |||||||||| | |||||||    
T  6595154 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgt-aagaactcgttgatagtggattggagag 6595056  T
Q  193 at 194  Q
    ||    
T  6595055 at 6595054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 11690521 - 11690621
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||| |||| | ||||| | |||||||||| | |||||||    
T  11690521 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaaatcgttgatagtggattggagag 11690619  T
Q  193 at 194  Q
    ||    
T  11690620 at 11690621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 30218193 - 30218104
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    ||||||| ||| |||||||||| |||||||| ||||| |||||||   |||||| |||||||||||||| |||| ||||  |||||||||    
T  30218193 ggtagaagttaggtttgttcttggagagcttattgaagctaatttcttgtaaccattttgtatctctttgtaaataattcattgatagtg 30218104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 38312260 - 38312328
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||||||||||||||   ||||||| |||||||||||||    
T  38312260 ggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctcttt 38312328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 28196274 - 28196324
Alignment:
Q  174 ttgatagtgaagtggagagatgtctctcctccaaacgtaggttattattgg 224  Q
    ||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  28196274 ttgatagtgaagtggagagatgtctctcctccatatctaggtcattattgg 28196324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 33162598 - 33162532
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctct 159  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||    
T  33162598 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctct 33162532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 723892 - 723792
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  723892 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattggagag 723794  T
Q  193 at 194  Q
    ||    
T  723793 at 723792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 4503346 - 4503313
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  4503346 attgtaaacaccttggtgagtgaaaatcattgag 4503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5723468 - 5723435
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  5723468 attgtaaacaccttggtgagtgaaaatcattgag 5723435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 17057517 - 17057417
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | ||||||||||  ||||||||||| ||||||||  ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  17057517 ggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagag 17057419  T
Q  193 at 194  Q
    ||    
T  17057418 at 17057417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 17085500 - 17085400
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | ||||||||||  ||||||||||| ||||||||  ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  17085500 ggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagag 17085402  T
Q  193 at 194  Q
    ||    
T  17085401 at 17085400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 35447032 - 35446932
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  35447032 ggtagaaattagggttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 35446934  T
Q  193 at 194  Q
    ||    
T  35446933 at 35446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 42362372 - 42362472
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  42362372 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattggagag 42362470  T
Q  193 at 194  Q
    ||    
T  42362471 at 42362472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 45099709 - 45099742
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  45099709 attgtaaacaccttggtgagtgaaaatcattgag 45099742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 1631880 - 1631812
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| ||||| |   ||||||| |||||||||||||    
T  1631880 ggtagaaattaggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctcttt 1631812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 14202553 - 14202509
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    |||||||||||||||||||||||| ||||||||| || |||||||    
T  14202553 ggtagaaattatgtttgttctttgtgagcttgtttaagctaattt 14202509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 42288258 - 42288190
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||| |||||    
T  42288258 ggtagaaattaaggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatttcttt 42288190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 32289530 - 32289560
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  32289530 gtaaacaccttggtgagtgaaaatcattgag 32289560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Complemental strand, 36205874 - 36205844
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  36205874 gtaaacaccttggtgagtgaaaatcattgag 36205844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Complemental strand, 36988286 - 36988256
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  36988286 gtaaacaccttggtgagtgaaaatcattgag 36988256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 4484544 - 4484511
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||| |||||||||||    
T  4484544 attgtaaacaccttggtgagtgtaaatcattgag 4484511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 36988224 - 36988124
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | ||||||| || ||||||||  ||||||||||   ||||| ||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  36988224 ggtagaaattagggttgttctatgtgagcttgtcaaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagag 36988126  T
Q  193 at 194  Q
    ||    
T  36988125 at 36988124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 42020021 - 42019948
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||| ||||||||||||||  | ||||||| ||| |||||||   ||||| ||||||||||||||| ||||    
T  42020021 ggtagaatttatgtttgttcttataaagcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaa 42019948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 45726949 - 45727049
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||   |||||||||| |||||||||||| |||||||   ||||||  ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  45726949 ggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgatagtggattggagag 45727047  T
Q  193 at 194  Q
    ||    
T  45727048 at 45727049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 4484479 - 4484411
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  4484479 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 4484411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 11151739 - 11151671
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    |||||||||||  ||||||||||| ||||||||| || |||||||   ||||||| |||||||| ||||    
T  11151739 ggtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 11151805 - 11151765
Alignment:
Q  27 attgtaaacaccttgg-tgagtgaaaatcattgagcctctt 66  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  11151805 attgtaaacaccttgggtgagtgaaaatcattgagtctctt 11151765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 14633974 - 14633906
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| ||||||||| || |||||||   ||||||| |||||||| ||||    
T  14633974 ggtagaaattaggattgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 24885682 - 24885742
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgta 154  Q
    |||||||||| |||||||||||| ||||||||| || |||||||   ||||||| ||||||    
T  24885682 gtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgta 24885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 34811370 - 34811302
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||| |||| |||||||||||||| |||||||   ||||| ||||| |||||||||    
T  34811370 ggtagaaattaagattgctcttagagagcttgttgaagctaatttattgtaactcttttatatctcttt 34811302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 194
Target Start/End: Original strand, 36773587 - 36773682
Alignment:
Q  98 aaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||||| | |||||||||| |||||||||||| |||||||   ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  36773587 aaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactctttgatagtggattggagagat 36773682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 34112838 - 34112946
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagaga 193  Q
    ||||||||||||||||||||  |||||||||||||| ||||||| | |||||||||||| |||||||| ||||||| |  ||||||||||||||||||||    
T  34112838 gtagaaattatgtttgttctaggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagaga 34112937  T
Q  194 tgtctctcc 202  Q
    | |||||||    
T  34112938 tctctctcc 34112946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 16422755 - 16422634
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||  || ||||||||||||| ||||| ||| ||| |  | |||||||||||||||||    
T  16422755 ggtagaaattatgtttgttttttgagagctttttgaagctaatttctagaaacccttttgtatatctttgtaatgaactcatggatagtgaagtggagag 16422656  T
Q  193 atgtctctcctccaaacgtagg 214  Q
    || ||||| |||| ||||||||    
T  16422655 atctctcttctcccaacgtagg 16422634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 44570514 - 44570406
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||||||||||| || ||||||||||||||||||||||   |||||  |||||||||||||| ||||||| |  ||||||| || |||||||     
T  44570514 ggtagaaattatgtttgttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactcattgatagagatgtggagat 44570415  T
Q  193 atgtctctc 201  Q
    || ||||||    
T  44570414 atctctctc 44570406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 32091500 - 32091574
Alignment:
Q  95 tagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||   ||||| ||||||||||||||| |||||||    
T  32091500 tagaaattaggtttgttcttggagagtttgttgaaactaatttcttgtaactcttttgtatctctttgtaaagaa 32091574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 34788923 - 34788782
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa--ttggttgatagtgaagtggag 190  Q
    ||||||||||| | ||| |||| ||||||||||||||  ||||||   ||||| ||||||||||||||| |||||||  |   ||||||| ||||| |||    
T  34788923 ggtagaaattaggattgctcttggagagcttgttgaagttaatttcttgtaactcttttgtatctctttgtaaagaaactcttttgatagcgaagtagag 34788824  T
Q  191 agatgtctctcctccaaacgtaggttattattgggccgaact 232  Q
     ||| ||||||||||||| |||||| |||| ||| |||||||    
T  34788823 ggatctctctcctccaaatgtaggtcattactggaccgaact 34788782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 56178850 - 56178685
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||||||||||||||||||||||||||||||||  ||||  |||  | | |||||| |       ||||||||||| | |||||||||| || ||||||    
T  56178850 attgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattg-gtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtt 56178752  T
Q  127 gaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||| |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  56178751 gaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagagat 56178685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 8665428 - 8665528
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  8665428 ggtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 8665526  T
Q  193 at 194  Q
    ||    
T  8665527 at 8665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 21688269 - 21688336
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctt 160  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||  ||||| | ||||||||||||    
T  21688269 ggtagaaattagggttgttctttgtgagcttgttgaaactaattttttgtaactcatttgtatctctt 21688336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 33089900 - 33089987
Alignment:
Q  95 tagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    |||||||||||||||||||| |||||||||||||| |||||||    ||||| |||||||||||| | ||||||| |  |||||||||    
T  33089900 tagaaattatgtttgttcttggagagcttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtg 33089987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 263
Target Start/End: Original strand, 52065617 - 52065787
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| ||| |||||| |||||||| ||||| ||| ||||  ||||||| |||||||||||||| | |  || |  ||||||||||||||||||    
T  52065617 ggtagaaattaggtt-gttcttagagagcttattgaagctatttttctgtaaccccttttgtatctctttgttagaaactcattgatagtgaagtggaga 52065715  T
Q  192 gatgtctctcctccaaacgtaggttattattgggccgaactatgtgatcaaatttcagtgtgtttgtttttc 263  Q
    ||| ||||||| ||| |||| ||| ||| ||| | |||||   |||| | |||||  |||||||||||||||    
T  52065716 gatctctctcccccatacgtgggtcattgttgtgtcgaacagggtgaactaattttggtgtgtttgtttttc 52065787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 379400 - 379539
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  379400 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttgt-aagaactaattgatagtggattggagag 379498  T
Q  193 at--gtctctcctccaaacgtaggttattattgggccgaact 232  Q
    ||   ||||||||||| | |||||| ||| |||| |||||||    
T  379499 atcaatctctcctccaga-gtaggtcattgttggaccgaact 379539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 6542328 - 6542227
Alignment:
Q  93 ggtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||||   || | |||||||||||||||| | ||||| | |||||||||| | ||||||    
T  6542328 ggtagaaattaggatttgttctttgtgagcttgttgaaactaatttcttgttagccttttgtatctctttgt-aagaactcgttgatagtggattggaga 6542230  T
Q  192 gat 194  Q
    |||    
T  6542229 gat 6542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 9927671 - 9927506
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||||||||||||||||||||||||||| ||||  ||||| |||  | | |||||| |       ||||||||||| | |||||||||| || ||||||    
T  9927671 attgtaaacaccttggtgagtgaaaatcactgagtgtcttattcattg-gtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 9927573  T
Q  127 gaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  9927572 gaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagat 9927506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 26175781 - 26175684
Alignment:
Q  96 agaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||||||| | |||||||||| ||||||||||||||||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  26175781 agaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagat 26175684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 5349930 - 5350039
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| || ||||| ||| ||||||    ||| | | ||||||||||||| ||||||| | ||||||| ||||| ||||||    
T  5349930 ggtagaaattaggtttgttctttgtgaacttgtcgaagctaattccttgtagctcgtttgtatctctttgtaaagaactcgttgataatgaagcggagag 5350029  T
Q  193 atgtctctcc 202  Q
    || |||||||    
T  5350030 atctctctcc 5350039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 12073412 - 12073512
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||   ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  12073412 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagag 12073510  T
Q  193 at 194  Q
    ||    
T  12073511 at 12073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 12119559 - 12119660
Alignment:
Q  94 gtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||| ||||||||||| || ||| ||||| |||||||   ||||||||||||||||||||| ||||||| |  || |||||| | |||||||    
T  12119559 gtagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagag 12119658  T
Q  193 at 194  Q
    ||    
T  12119659 at 12119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 48143063 - 48143163
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   |||||||||||||||||||| || ||||| |  ||||||||| | |||||||    
T  48143063 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttcat-aagaactcattgatagtggattggagag 48143161  T
Q  193 at 194  Q
    ||    
T  48143162 at 48143163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 26699579 - 26699515
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||||||| |||||||||||| |||||||   ||||| ||||||||||||||| |||||||    
T  26699579 gtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaa 26699515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 27417112 - 27417040
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    |||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| ||||    
T  27417112 gtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa 27417040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 22882894 - 22882823
Alignment:
Q  98 aaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||| |||||||||| ||||| |||||||| |||||||   ||||||||||||||||||||  |||||||    
T  22882894 aaattaggtttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaa 22882823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 22934558 - 22934487
Alignment:
Q  98 aaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||| |||||||||| ||||| |||||||| |||||||   ||||||||||||||||||||  |||||||    
T  22934558 aaattaggtttgttcttggagagtttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaa 22934487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 33989867 - 33989965
Alignment:
Q  96 agaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||||| || |||||||||| ||||| |||||||| |||||||   |||| |||||||||||||||| |||| || | ||| |||||| | |||||||||    
T  33989867 agaaactaggtttgttcttagagagtttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggagagat 33989965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 4587978 - 4588047
Alignment:
Q  93 ggtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||||  ||||||||||| |||||||   |||||||||||||||||||||    
T  4587978 ggtagaaattaagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctcttt 4588047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 13992499 - 13992466
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  13992499 attgtaaacaccttggtgagtgaaaatcattgag 13992466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 24969132 - 24969232
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||  ||||||||||| |||||||||||| |||||||   ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  24969132 ggtagaaattagatttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactaattgatagtggattggagag 24969230  T
Q  193 at 194  Q
    ||    
T  24969231 at 24969232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 36994544 - 36994644
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  36994544 ggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattggagag 36994642  T
Q  193 at 194  Q
    ||    
T  36994643 at 36994644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 54200054 - 54199954
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||||| | |||||    
T  54200054 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtgaattagagag 54199956  T
Q  193 at 194  Q
    ||    
T  54199955 at 54199954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 161
Target Start/End: Complemental strand, 50262845 - 50262781
Alignment:
Q  97 gaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  50262845 gaaattacggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 50262781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 52467502 - 52467434
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||| |||||||||||| ||||| |   ||||||| |||||||| ||||    
T  52467502 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 54883040 - 54883108
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||||| |||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  54883040 ggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 54883108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 55085513 - 55085445
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   |||| || |||||||||||||    
T  55085513 ggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaaaccatttgtatctcttt 55085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 6677506 - 6677565
Alignment:
Q  110 ttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    ||||| |||||||||||||| |||||||   ||||||||||||||| ||||| |||||||    
T  6677506 ttcttggagagcttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaa 6677565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 38811337 - 38811200
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||| |||||| |||||||||| ||||| ||||||||  ||||||  ||| ||| |||||||| ||||| ||||  | |  |||||||||||| ||||||    
T  38811337 ggtacaaattaagtttgttcttggagagtttgttgaatttaatttctagtgaccattttgtat-tctttgtaaatgactcattgatagtgaagcggagag 38811239  T
Q  193 atgtctctcctccaaacgtaggttattattgggccgaact 232  Q
    || ||||||| ||||  |||||| ||| |||| |||||||    
T  38811238 atctctctcc-ccaagagtaggtcattgttggaccgaact 38811200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 53345254 - 53345313
Alignment:
Q  110 ttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    ||||||| ||||||||||||||||||||   ||||||||||| ||||| ||| |||||||    
T  53345254 ttctttgtgagcttgttgaaactaatttcttgtaacccttttatatctttttgtaaagaa 53345313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 2209733 - 2209834
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | || ||||||| |||||||||||| |||||||   ||||||| |||||||||||||| | ||||| |  ||||||||| | ||||||    
T  2209733 ggtagaaattagggtttttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggattggaga 2209831  T
Q  192 gat 194  Q
    |||    
T  2209832 gat 2209834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 194
Target Start/End: Original strand, 37740580 - 37740745
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||||||||||||||||||||||||||| ||||  ||||  |||  | | |||||| |       |||| |||||| | |||||||||| || ||||||    
T  37740580 attgtaaacaccttggtgagtgaaaatcactgagtgtcttgttcattg-gtgagatttggaaaaagggtataaattagggttgttctttgtgaacttgtt 37740678  T
Q  127 gaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  37740679 gaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagat 37740745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 55085583 - 55085545
Alignment:
Q  22 aaacaattgtaaacacctt-ggtgagtgaaaatcattga 59  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  55085583 aaacaattgtaaacaccttgggtgagtgaaaatcattga 55085545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5370300 - 5370267
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||| ||||||||||||||||||||||    
T  5370300 attgtaaacactttggtgagtgaaaatcattgag 5370267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 6655976 - 6656076
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  6655976 ggtagaaattaaggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagag 6656074  T
Q  193 at 194  Q
    ||    
T  6656075 at 6656076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 12745584 - 12745484
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  ||||||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  12745584 ggtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 12745486  T
Q  193 at 194  Q
    ||    
T  12745485 at 12745484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 30000019 - 29999986
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||| |||||    
T  30000019 attgtaaacaccttggtgagtgaaaatcgttgag 29999986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 34570562 - 34570462
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   |||||||  |||||||||||| | ||||| |  ||||||||| | |||||||    
T  34570562 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctctttgt-aagaactcattgatagtggattggagag 34570464  T
Q  193 at 194  Q
    ||    
T  34570463 at 34570462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 40632465 - 40632565
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||   |||||||||| |||||||||||| |||||||   ||||||  ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  40632465 ggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgatagtggattggagag 40632563  T
Q  193 at 194  Q
    ||    
T  40632564 at 40632565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 26364256 - 26364324
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||| | |||||||||||||    
T  26364256 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctcttt 26364324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 46147539 - 46147471
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||| ||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  46147539 ggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 46147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 47038558 - 47038514
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  47038558 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 47038514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 48142514 - 48142450
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||||||| |||||||||||| ||| |||   ||||||||| | ||||||||| |||||||    
T  48142514 gtttgttctttgtgagcttgttgaagctagtttcttgtaacccttgtatatctctttgtaaagaa 48142450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 231
Target Start/End: Complemental strand, 25491114 - 25490978
Alignment:
Q  95 tagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||||||||| ||||||||||||||||||||||||| || ||||    ||  |||||||||||||||| ||||||| |  |||||||||||||||||||||    
T  25491114 tagaaattaggtttgttctttgagagcttgttgaagctgatttcttatactccttttgtatctctttgtaaagaaatcattgatagtgaagtggagagat 25491015  T
Q  195 gtctctcctccaaacgtaggttattattgggccgaac 231  Q
     |||||||||||||| ||| | ||||||||| |||||    
T  25491014 ctctctcctccaaacatagttcattattgggtcgaac 25490978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 24635277 - 24635390
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||| ||||| |||||||| ||||||||  |||||  ||||||||||||||||||  ||||  ||||||||||||| || |     
T  24635277 ggtagaaattaagtttgttcttggagagtttgttgaagctaattttttgtaactattttgtatctctttataatcaattcattgatagtgaagtcgatat 24635376  T
Q  193 atgtctctcctcca 206  Q
    || |||||||||||    
T  24635377 atctctctcctcca 24635390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 46173377 - 46173477
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | |||||||  ||||||||| | |||||||    
T  46173377 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaattcattgatagtggattggagag 46173475  T
Q  193 at 194  Q
    ||    
T  46173476 at 46173477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 20937676 - 20937744
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||||||||||| || ||||||||||||||  ||||||   |||||||||||||||||||||    
T  20937676 ggtagaaattatgtttgtttttggagagcttgttgaagttaatttcttgtaacccttttgtatctcttt 20937744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 46860494 - 46860562
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  46860494 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 54739102 - 54739004
Alignment:
Q  93 ggtagaaatta-tgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||| ||||| ||||||| | ||||||| |  ||||||||| | ||||||    
T  54739102 ggtagaaattagtgtttgttctttgtgagcttgttgaaactaa-tttatgtaactcttttatatctctctgtaaagaactcattgatagtggattggaga 54739004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 5434096 - 5434058
Alignment:
Q  22 aaacaattgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5434096 aaacaattgtaaacaccttggtgagtgaaaatcattgag 5434058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 8166604 - 8166507
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    |||||||||| |||||||||| ||||| ||||||||  |||| |    ||||| |||||||||||||| ||||||| | ||||||||||||| |||||    
T  8166604 gtagaaattaggtttgttcttggagagtttgttgaagttaatatcttataacctttttgtatctctttgtaaagaacttgttgatagtgaagcggaga 8166507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 4569898 - 4569940
Alignment:
Q  19 ggaaaacaattgtaaacacctt-ggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  4569898 ggaaaacaattgtaaacaccttgggtgagtgaaaatcattgag 4569940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 194
Target Start/End: Original strand, 7762220 - 7762385
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||| ||||||||||||||||||||||||||||  ||||| |||  | | ||||||         ||||||||||| | |||||||||| || ||||||    
T  7762220 attgtgaacaccttggtgagtgaaaatcattgagtgtcttattcattg-gtgagattgagaaaaagggtagaaattagggttgttctttgtgaacttgtt 7762318  T
Q  127 gaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||| |||||||   ||||| ||||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  7762319 gaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagagat 7762385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 32891123 - 32891224
Alignment:
Q  93 ggtagaaattatgttt-gttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| |||| |||||||| |||||||||||| |||||||   ||||| | ||||||||||||| | ||||| | |||||||||| | ||||||    
T  32891123 ggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcgttgatagtggattggaga 32891221  T
Q  192 gat 194  Q
    |||    
T  32891222 gat 32891224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 49199618 - 49199517
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||| | ||||| |  ||||||||| | ||||||    
T  49199618 ggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggattggaga 49199520  T
Q  192 gat 194  Q
    |||    
T  49199519 gat 49199517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 54593727 - 54593824
Alignment:
Q  96 agaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  54593727 agaaattagggttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagat 54593824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5258358 - 5258325
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  5258358 attgtaaacaccttggtgagtgaaaatcattgag 5258325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5260537 - 5260504
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  5260537 attgtaaacaccttggtgagtgaaaatcattgag 5260504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 5434025 - 5433948
Alignment:
Q  93 ggtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    ||||||||||| | ||||||||||| ||||||||| || |||||||   ||||||||||| ||||||||| |||||||    
T  5434025 ggtagaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttatatctctttgtaaagaa 5433948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 7764422 - 7764455
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  7764422 attgtaaacaccttggtgagtgaaaatcattgag 7764455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 9636340 - 9636307
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  9636340 attgtaaacaccttggtgagtgaaaatcattgag 9636307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 22835150 - 22835050
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  22835150 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattggagag 22835052  T
Q  193 at 194  Q
    ||    
T  22835051 at 22835050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 23198151 - 23198118
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  23198151 attgtaaacaccttggtgagtgaaaatcattgag 23198118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 23200350 - 23200317
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  23200350 attgtaaacaccttggtgagtgaaaatcattgag 23200317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 29682379 - 29682479
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||||||||||||||| ||||||||| || |||||||   || |||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  29682379 ggtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatccctttgt-aagaactcattgatagtggattggagag 29682477  T
Q  193 at 194  Q
    ||    
T  29682478 at 29682479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 30236145 - 30236245
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||  ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  30236145 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactcattgatagtggattggagag 30236243  T
Q  193 at 194  Q
    ||    
T  30236244 at 30236245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 34491232 - 34491332
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  34491232 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagag 34491330  T
Q  193 at 194  Q
    ||    
T  34491331 at 34491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 35138854 - 35138765
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    |||||||||||||||||||||| | ||| ||||||||  ||||||   | ||| ||||||||||||||| ||||||| |  |||||||||    
T  35138854 ggtagaaattatgtttgttcttggtgagtttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtg 35138765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 40735403 - 40735503
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||  ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  40735403 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttattgtaaccagtttgtatctctttgt-aagaactcattgatagtggattggagag 40735501  T
Q  193 at 194  Q
    ||    
T  40735502 at 40735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 45095119 - 45095152
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  45095119 attgtaaacaccttggtgagtgaaaatcattgag 45095152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 5236604 - 5236536
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| |||||||||||||    
T  5236604 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 5236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 206
Target Start/End: Original strand, 7764484 - 7764598
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||| || |||||||   ||||| ||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  7764484 ggtagaaattagggttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagag 7764582  T
Q  193 atg--tctctcctcca 206  Q
    |||  |||||||||||    
T  7764583 atgaatctctcctcca 7764598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 31340349 - 31340281
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||  | |||||||||| |||||||||||| ||||||| | ||||| | |||||||||||||    
T  31340349 ggtagaaattgaggttgttctttgtgagcttgttgaagctaatttcatgtaactcatttgtatctcttt 31340281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 25173711 - 25173620
Alignment:
Q  22 aaacaattgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctt 114  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||  ||||||  ||||||||        ||||||||||| ||||||||||    
T  25173711 aaacaattgtaaacaccttggtaagtg-aaatcattgagtctcttggtcacggctagagattctggaaaagggtagaaattaggtttgttctt 25173620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 760867 - 760967
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| || ||||||||| ||||||||| || |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  760867 ggtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgt-aagaactcattgatagtggattggagag 760965  T
Q  193 at 194  Q
    ||    
T  760966 at 760967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 5373252 - 5373321
Alignment:
Q  93 ggtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||||||||||  |||||||||||| |||||||   ||||||||||| |||||||||    
T  5373252 ggtagaaattaggctttgttctttttgagcttgttgaagctaatttattgtaacccttttatatctcttt 5373321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 9581302 - 9581402
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||    |||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  9581302 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccctttgt-aagaactcattgatagtggattggagag 9581400  T
Q  193 at 194  Q
    ||    
T  9581401 at 9581402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 19684037 - 19683937
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  19684037 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 19683939  T
Q  193 at 194  Q
    ||    
T  19683938 at 19683937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 32744640 - 32744607
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||| ||||||||||||||||||||||    
T  32744640 attgtaaacacattggtgagtgaaaatcattgag 32744607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 40734518 - 40734618
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||| | |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  40734518 ggtagaaattagggttgttctttgtgagcttgttgaacctaatttcttgtaacacatttgtatccctttgt-aagaactcattgatagtggattggagag 40734616  T
Q  193 at 194  Q
    ||    
T  40734617 at 40734618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 44331565 - 44331665
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||| ||| |||||||||||| |||||||   |||| || ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  44331565 ggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaagccatttgtatctctttgt-aagaacttattgatagtggattggagag 44331663  T
Q  193 at 194  Q
    ||    
T  44331664 at 44331665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 44700626 - 44700526
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||| |||||||| |||||||   ||||||  ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  44700626 ggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaacctatttgtatctctttgt-aagaactctttgatagtggattggagag 44700528  T
Q  193 at 194  Q
    ||    
T  44700527 at 44700526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 45095183 - 45095283
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  45095183 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 45095281  T
Q  193 at 194  Q
    ||    
T  45095282 at 45095283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 5258292 - 5258224
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  5258292 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 5258224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 5260471 - 5260403
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  5260471 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 5260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 9636274 - 9636210
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatct 157  Q
    ||||||||||| | |||||||||| || |||||  ||||||||||   |||||||||||||||||    
T  9636274 ggtagaaattagggttgttctttgtgaacttgtcaaaactaatttcttgtaacccttttgtatct 9636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 23410477 - 23410433
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    |||||||||||||||| ||||||| ||||||||| || |||||||    
T  23410477 ggtagaaattatgtttattctttgtgagcttgtttaagctaattt 23410433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 29810889 - 29810988
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagaga 193  Q
    ||||||||||   |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | ||||||||    
T  29810889 gtagaaattagagttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagaga 29810987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 29813083 - 29813151
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| |||| ||||||||    
T  29813083 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctcttt 29813151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 37408478 - 37408546
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  37408478 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 37408546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 39153509 - 39153437
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataa 165  Q
    ||||||||||| |||||||| ||| ||||||||| || |||||||   ||||| | |||||||| ||||||||    
T  39153509 ggtagaaattaggtttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttataa 39153437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 43401950 - 43401906
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  43401950 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 43401906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 47304271 - 47304307
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaa 129  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  47304271 ggtagaaattatggttgttctttgtgagcttgttgaa 47304307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 233
Target Start/End: Complemental strand, 43363622 - 43363480
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctc--tttataaagaattggttgatagtgaagtggag 190  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||   ||||| ||||||||||||  ||| |||| || |  ||||||||||||||||     
T  43363622 ggtagaaattaggtttgttcttggagagcttgttgaaactaatttattgtaactcttttgtatctctatttgtaaataactcattgatagtgaagtggat 43363523  T
Q  191 agatgtctctcctccaaacgtaggttattattgggccgaacta 233  Q
    |||| ||||||||||| | || ||| ||| ||||||| |||||    
T  43363522 agatctctctcctccatatgttggtcattgttgggccaaacta 43363480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 6431991 - 6432091
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| | |||||||||| | |||||||    
T  6431991 ggtagaaattaggattgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattggagag 6432089  T
Q  193 at 194  Q
    ||    
T  6432090 at 6432091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 22269993 - 22270093
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| || ||||||||| | |||||||    
T  22269993 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactgattgatagtggattggagag 22270091  T
Q  193 at 194  Q
    ||    
T  22270092 at 22270093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 5116625 - 5116725
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagaga 193  Q
    |||||||||| |||||||||| || || ||||||||  ||||||   |||| |||||||||||||||| ||||||| |  ||||||||||| ||||||||    
T  5116625 gtagaaattaggtttgttcttggatagtttgttgaagataatttattgtaaaccttttgtatctctttgtaaagaactcattgatagtgaattggagaga 5116724  T
Q  194 t 194  Q
    |    
T  5116725 t 5116725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 23565210 - 23565109
Alignment:
Q  93 ggtagaaattatgt-ttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||   ||||| ||||||||||||||| | ||||| |  ||||||||| | ||||||    
T  23565210 ggtagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggaga 23565112  T
Q  192 gat 194  Q
    |||    
T  23565111 gat 23565109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 4253678 - 4253609
Alignment:
Q  93 ggtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||||||||||| |||||||||||| ||||||| | ||||||||||| |||||||||    
T  4253678 ggtagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctcttt 4253609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 26417336 - 26417436
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||||||||||||  ||||||   ||||||| ||||||||||||| | ||||| | |||||||||| | |||||||    
T  26417336 ggtagaaattagggttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattggagag 26417434  T
Q  193 at 194  Q
    ||    
T  26417435 at 26417436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 2390302 - 2390370
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  2390302 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2390370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 36574665 - 36574575
Alignment:
Q  93 ggtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    ||||||||||| | ||||||||||| ||| |||||||| |||||||   ||||||||||| ||||||||| ||||||| |  |||||||||    
T  36574665 ggtagaaattaagatttgttctttgtgagtttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgatagtg 36574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 496131 - 496031
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | | |||||||| |||||||||||| |||||||   | ||||| ||||||||||||||| ||||| |  ||||||||| | |||||||    
T  496131 ggtagaaattagggtagttctttgtgagcttgttgaagctaatttcttgcaacccatttgtatctctttat-aagaactcattgatagtggattggagag 496033  T
Q  193 at 194  Q
    ||    
T  496032 at 496031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 4178729 - 4178762
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  4178729 attgtaaacaccttggtgagtgaaaatcattgag 4178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 4586181 - 4586281
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| ||||||||  ||||||| ||| ||||||||| | ||||| |  ||||||||| | |||||||    
T  4586181 ggtagaaattagggttgttctttgtgaacttgttgaagctaattttttgtaacccatttttatctctttgt-aagaactcattgatagtggattggagag 4586279  T
Q  193 at 194  Q
    ||    
T  4586280 at 4586281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 194
Target Start/End: Original strand, 18396338 - 18396438
Alignment:
Q  94 gtagaaattatgttt-gttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||| |||| |||||| ||||| |||||||| ||| ||||  |||||  ||||||||||||||||||||||||  ||||||| | | |||||||    
T  18396338 gtagaaattaggttttgttcttggagagtttgttgaacctatttttttgtaaca-ttttgtatctctttataaagaattcattgatagaggattggagag 18396436  T
Q  193 at 194  Q
    ||    
T  18396437 at 18396438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 23554994 - 23555027
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  23554994 attgtaaacaccttggtgagtgaaaatcattgag 23555027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 24514974 - 24514941
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  24514974 attgtaaacaccttggtgagtgaaaatcattgag 24514941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 25767171 - 25767138
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  25767171 attgtaaacaccttggtgagtgaaaatcattgag 25767138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 29991009 - 29991042
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  29991009 attgtaaacaccttggtgagtgaaaatcattgag 29991042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 30024880 - 30024780
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||| ||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  30024880 ggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattggagag 30024782  T
Q  193 at 194  Q
    ||    
T  30024781 at 30024780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 35853869 - 35854002
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||||||||||||||||||||||||||||||||  ||||  |||  | | |||||| |       ||||||||||| | |||||||||| || |||||     
T  35853869 attgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattg-gtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtc 35853967  T
Q  127 gaaactaattttaagtaacccttttgtatctcttt 161  Q
     || |||||||   |||||||||||||||||||||    
T  35853968 aaagctaatttcttgtaacccttttgtatctcttt 35854002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 39731331 - 39731364
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  39731331 attgtaaacaccttggtgagtgaaaatcattgag 39731364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 43864264 - 43864337
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| ||||    
T  43864264 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctctttgtaaa 43864337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 47674091 - 47673991
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  47674091 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 47673993  T
Q  193 at 194  Q
    ||    
T  47673992 at 47673991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 48408757 - 48408790
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  48408757 attgtaaacaccttggtgagtgaaaatcattgag 48408790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 48491599 - 48491699
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| |||||||||||||  |||||| |  ||||||||| | |||||||    
T  48491599 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt-gaaagaactcattgatagtggattggagag 48491697  T
Q  193 at 194  Q
    ||    
T  48491698 at 48491699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 2361120 - 2361052
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  2361120 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 2361052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 4510696 - 4510624
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataa 165  Q
    ||||||||||| | |||||||||| ||| || ||||| |||||||   ||||||| |||||||||||||||||    
T  4510696 ggtagaaattaaggttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctctttataa 4510624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 4512538 - 4512466
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataa 165  Q
    ||||||||||| | |||||||||| ||| || ||||| |||||||   ||||||| |||||||||||||||||    
T  4512538 ggtagaaattaaggttgttctttgtgagtttattgaagctaatttcttgtaacccatttgtatctctttataa 4512466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 22328527 - 22328471
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    |||||||||||| |||||||||||| |||||||   ||||| |||||||||||||||    
T  22328527 gtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctcttt 22328471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 27347837 - 27347905
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| |||||||||||||    
T  27347837 ggtagaaattaggattgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 27347905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 29608757 - 29608825
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  29608757 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 29608825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 31733117 - 31733049
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| ||||||| |||| |||||||   ||||||| |||||||||||||    
T  31733117 ggtagaaattagggttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctcttt 31733049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 48489451 - 48489519
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||||||||||| | ||||||||| |||||||   ||||||| |||||||||||||    
T  48489451 ggtagaaattagggttgttctttgaaaacttgttgaagctaatttcttgtaacccatttgtatctcttt 48489519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 48599482 - 48599414
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  48599482 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 48599414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 4508853 - 4508786
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    |||||||||| | |||||||||| |||||| ||||| |||||||   ||||||| |||||||||||||    
T  4508853 gtagaaattagggttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctcttt 4508786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 8359465 - 8359325
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | || ||||||| ||||||||| ||||||||||   ||||||| |||||||||||||| | ||||| |  ||||||||| | ||||||    
T  8359465 ggtagaaattagggtttttctttgtgagcttgtttaaactaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggattggaga 8359367  T
Q  192 gat--gtctctcctccaaacgtaggttattattgggccgaact 232  Q
    |||   ||||||||||| | |||||| ||| |||| |||||||    
T  8359366 gatcaatctctcctccaga-gtaggtcattgttggaccgaact 8359325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 1113679 - 1113745
Alignment:
Q  95 tagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||| | |||||||||| |||||||||||| |||||||    |||||| |||||||||||||    
T  1113679 tagaaattagggttgttctttgtgagcttgttgaagctaatttcttataacccatttgtatctcttt 1113745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 4253751 - 4253709
Alignment:
Q  19 ggaaaacaattgtaaacacctt-ggtgagtgaaaatcattgag 60  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  4253751 ggaaaacatttgtaaacaccttaggtgagtgaaaatcattgag 4253709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 5514157 - 5514112
Alignment:
Q  94 gtagaaattatgttt-gttctttgagagcttgttgaaactaatttt 138  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||    
T  5514157 gtagaaattatgttttgttctttgtgagcttgttgaagctaatttt 5514112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 19502132 - 19502165
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||| ||||||||||    
T  19502132 attgtaaacaccttggtgagtgagaatcattgag 19502165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 23555060 - 23555160
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||| |||||||| |||||| | ||||| |  ||||||||| | |||||||    
T  23555060 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgtacctctttgt-aagaactcattgatagtggattggagag 23555158  T
Q  193 at 194  Q
    ||    
T  23555159 at 23555160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 13065546 - 13065482
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatct 157  Q
    ||||||||||| | |||  ||||||||| ||||||||||||||||   |||||| ||||||||||    
T  13065546 ggtagaaattaggattgcactttgagagtttgttgaaactaatttattgtaaccgttttgtatct 13065482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 23793952 - 23793904
Alignment:
Q  121 cttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    ||||||||| |||| ||| ||||||  ||||||||||||||||||||||    
T  23793952 cttgttgaagctaacttttagtaactattttgtatctctttataaagaa 23793904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 31105541 - 31105477
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatct 157  Q
    |||||||||||  ||| ||||||| |||||||||||| |||||||   ||||||| |||||||||    
T  31105541 ggtagaaattagattttttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatct 31105477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 31518815 - 31518883
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||| |||||| ||||| ||| |||   ||||| | |||||||||||||    
T  31518815 ggtagaaattaggtttgttctttgtgagcttattgaagctagtttcttgtaactcatttgtatctcttt 31518883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 40808663 - 40808699
Alignment:
Q  148 ttttgtatctctttataaagaattggttgatagtgaa 184  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  40808663 ttttgtatctctttgtaaagaattcgttgatagtgaa 40808699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 41317648 - 41317608
Alignment:
Q  27 attgtaaacaccttgg-tgagtgaaaatcattgagcctctt 66  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  41317648 attgtaaacaccttggatgagtgaaaatcattgagtctctt 41317608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 47676284 - 47676216
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| ||  |||||||| |||||||   ||||||| |||||||||||||    
T  47676284 ggtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctcttt 47676216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 10700796 - 10700688
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||| |||||||||||||| |||||| | | ||||  ||||||||||||||| |||||| |  |||||||||||||||||||    
T  10700796 ggtagaaattaggtttgttcttagagagcttgttgaagctaattctta-taacatttttgtatctctttaaaaagaactcattgatagtgaagtggagag 10700698  T
Q  193 atgtctctcc 202  Q
    || |||||||    
T  10700697 atctctctcc 10700688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 268
Target Start/End: Original strand, 32579250 - 32579418
Alignment:
Q  99 aattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagatgtct 198  Q
    ||||| |||| || || |||||||| |||||||||||||   ||||| ||| ||||| ||||| |||| || |  |||| |||||||||||| ||| |||    
T  32579250 aattaggtttatttttggagagcttattgaaactaatttcttgtaactcttatgtatgtctttgtaaataactcattgaaagtgaagtggagtgatctct 32579349  T
Q  199 ctcctccaaacgtaggttattattgggccgaactatgtgatcaaatttcagtgtgtttgtttttcttctc 268  Q
    ||||||||||||||||| ||| || ||||||||||  ||| ||||| |  |||||||||||| |||||||    
T  32579350 ctcctccaaacgtaggtcattctttggccgaactagatgaccaaatat-ggtgtgtttgtttctcttctc 32579418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 30802854 - 30802957
Alignment:
Q  99 aattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagatgtct 198  Q
    ||||| |||||||||||| ||||||||||||||||||||   |||| |||||||||||| ||| ||||||| | ||||||| |||||  ||||||| |||    
T  30802854 aattaggtttgttctttgtgagcttgttgaaactaatttattgtaatccttttgtatctatttgtaaagaactcgttgataatgaagcagagagatctct 30802953  T
Q  199 ctcc 202  Q
    ||||    
T  30802954 ctcc 30802957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 3075806 - 3075706
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||| |||| |||||||   ||||||| ||||||||| ||| | ||||||| |||||||||||| |||||||    
T  3075806 ggtagaaattaggtttgttctttgtgagcttgctgaatctaatttcttgtaacccatttgtatctttttgt-aagaattcgttgatagtgaattggagag 3075708  T
Q  193 at 194  Q
    ||    
T  3075707 at 3075706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 316782 - 316858
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||   |||| |||||||||||||||| |||||||    
T  316782 ggtagaaattaggtttgttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaa 316858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 231
Target Start/End: Original strand, 32609561 - 32609693
Alignment:
Q  99 aattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagatgtct 198  Q
    ||||| |||| ||||||||||| ||||||||  ||||||   ||||| ||||||||| ||||| ||||||| |  |||||| ||||||| | | || |||    
T  32609561 aattaagtttattctttgagagtttgttgaagttaatttcttgtaactcttttgtatttctttgtaaagaacttattgatattgaagtgcataaatctct 32609660  T
Q  199 ctcctccaaacgtaggttattattgggccgaac 231  Q
    ||||||||||||||||| ||| |||||| ||||    
T  32609661 ctcctccaaacgtaggtcattcttgggctgaac 32609693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 28278336 - 28278409
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| ||||    
T  28278336 ggtagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa 28278409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 30793204 - 30793265
Alignment:
Q  141 gtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagatgtctctcc 202  Q
    |||||| |||||||||||||| ||||||| |  ||||||||||||||||||||| |||||||    
T  30793204 gtaaccattttgtatctctttgtaaagaactaattgatagtgaagtggagagatctctctcc 30793265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 533789 - 533857
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||| |||||| |||||||||||| ||||||||  ||||||| |||||||||||||    
T  533789 ggtagaaattagggttggtctttgtgagcttgttgaagctaattttttgtaacccatttgtatctcttt 533857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 13695827 - 13695763
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||||||| ||||||||| || |||||||   ||||||||||||||||||||| |||||||    
T  13695827 gtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctctttgtaaagaa 13695763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 16452100 - 16452168
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||  |||||||||||| |||||||   ||||||| |||||||||||||    
T  16452100 ggtagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 16452168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 33831700 - 33831768
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||||||||    
T  33831700 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 38747025 - 38747093
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  38747025 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 38747093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 184
Target Start/End: Complemental strand, 14689575 - 14689484
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaa 184  Q
    |||||||||||||||||||| | ||| |||||||||| ||||||||  ||||   |||||||||||||| |||| ||||  ||| |||||||    
T  14689575 ggtagaaattatgtttgttcatggagtgcttgttgaagctaattttttgtaatatttttgtatctctttgtaaataatttattgttagtgaa 14689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 194
Target Start/End: Original strand, 13239706 - 13239871
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgtt 126  Q
    ||||||||||||||||||||||||||||||||||  ||||  |||  | | |||||| |       ||||||||||| | || ||||||| || ||||||    
T  13239706 attgtaaacaccttggtgagtgaaaatcattgagtgtcttgttcattg-gtgagattggaaaaaatggtagaaattagggtttttctttgtgaacttgtt 13239804  T
Q  127 gaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||| |||||||   ||||| ||||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  13239805 gaagctaatttcttgtaactcttttgtatctctttgt-aagaactcattgatagtggattggagagat 13239871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 35616190 - 35616280
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaa 184  Q
    |||||||||| |||||||||| ||||||| ||| ||  ||||||   ||||||||||||||| ||||| ||||||| |  |||||||||||    
T  35616190 gtagaaattaggtttgttcttggagagctcgtttaagttaatttcttgtaacccttttgtatttctttgtaaagaactcattgatagtgaa 35616280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 213485 - 213585
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||||||||| || |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  213485 ggtagaaattagggttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 213583  T
Q  193 at 194  Q
    ||    
T  213584 at 213585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 13343015 - 13343048
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  13343015 attgtaaacaccttggtgagtgaaaatcattgag 13343048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 13488223 - 13488323
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  13488223 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 13488321  T
Q  193 at 194  Q
    ||    
T  13488322 at 13488323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 25412716 - 25412749
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  25412716 attgtaaacaccttggtgagtgaaaatcattgag 25412749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 30683134 - 30683101
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  30683134 attgtaaacaccttggtgagtgaaaatcattgag 30683101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 212
Target Start/End: Complemental strand, 32583429 - 32583312
Alignment:
Q  95 tagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||||||||||| |||||||| || || |||||||| |||||| |  ||| | ||||||||||| ||| ||||||| |  |||||||||||| ||||| |     
T  32583429 tagaaattatgattgttcttggaaaggttgttgaagctaattatgtgtatctcttttgtatctttttgtaaagaactcattgatagtgaagcggagatac 32583330  T
Q  195 gtctctcctccaaacgta 212  Q
     ||||||| ||| |||||    
T  32583329 ctctctccaccagacgta 32583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 36074258 - 36074225
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  36074258 attgtaaacaccttggtgagtgaaaatcattgag 36074225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 42428578 - 42428478
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||||| || ||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  42428578 ggtagaaattatggtttttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 42428480  T
Q  193 at 194  Q
    ||    
T  42428479 at 42428478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 538045 - 538113
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||| |||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  538045 ggtagaaattaaggttgctctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 3325933 - 3326009
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||||||  |||||||||  ||||||||||||| |||||||   |||||| || ||||||||||| |||||||    
T  3325933 ggtagaaattagttttgttcttgaagagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaa 3326009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 39468697 - 39468629
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| |||||||||||||    
T  39468697 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 39468629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 42310083 - 42310015
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||| | ||||| |||||| |||||||||||| |||||||   ||||| |||||||||||||||    
T  42310083 ggtagaaatcaagtttgatctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctcttt 42310015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 194
Target Start/End: Original strand, 32636778 - 32636944
Alignment:
Q  27 attgtaaacaccttgg-tgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgt 125  Q
    |||||||||||||||| ||||||||||||||||||  ||||| |||  | | |||||| |       ||||||||||||| |||||||||| || |||||    
T  32636778 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttattcattg-gtgagattgggaaaatgggtagaaattatggttgttctttgtgaacttgt 32636876  T
Q  126 tgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
      || |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  32636877 caaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattggagagat 32636944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 10054964 - 10054867
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||||||||||||||  |||| |||||||| |||||||    ||| |||||||||||||||| ||| ||| |  ||||||||| | ||||||    
T  10054964 ggtagaaattatgtttgttcttgaagagtttgttgaagctaatttcttataa-ccttttgtatctctttgtaatgaactcattgatagtgtattggaga 10054867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 13695913 - 13695871
Alignment:
Q  19 ggaaaacaattgtaaacaccttg-gtgagtgaaaatcattgag 60  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  13695913 ggaaaacatttgtaaacaccttgtgtgagtgaaaatcattgag 13695871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 16409440 - 16409470
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  16409440 gtaaacaccttggtgagtgaaaatcattgag 16409470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 26170739 - 26170769
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  26170739 gtaaacaccttggtgagtgaaaatcattgag 26170769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 26177848 - 26177878
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  26177848 gtaaacaccttggtgagtgaaaatcattgag 26177878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16641086 - 16641017
Alignment:
Q  93 ggtagaaatta-tgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| ||||||||||||| |||||||||||| || ||||    |||| |||||||||||||||    
T  16641086 ggtagaaattagtgtttgttctttgtgagcttgttgaagctgatttctgataactcttttgtatctcttt 16641017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 25412780 - 25412880
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  25412780 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 25412878  T
Q  193 at 194  Q
    ||    
T  25412879 at 25412880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 27637761 - 27637692
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctcttt 161  Q
    ||||||||||| | |||||||||  ||||||||| ||||||||||   ||||||| ||||||||||||||    
T  27637761 ggtagaaattagggttgttctttatgagcttgtttaaactaatttcttgtaacccattttgtatctcttt 27637692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 30182543 - 30182576
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||| |||||||||||||||||||||||||||||    
T  30182543 attgcaaacaccttggtgagtgaaaatcattgag 30182576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 37439088 - 37439121
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||| ||||||||||||||||||||||    
T  37439088 attgtaaacactttggtgagtgaaaatcattgag 37439121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 40147281 - 40147381
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||| | |||||||||||| |||||||   ||||| | ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  40147281 ggtagaaattagggttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgt-aagaactcattgatagtggattggagag 40147379  T
Q  193 at 194  Q
    ||    
T  40147380 at 40147381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 9789425 - 9789397
Alignment:
Q  32 aaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||    
T  9789425 aaacaccttggtgagtgaaaatcattgag 9789397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 18441849 - 18441821
Alignment:
Q  32 aaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||    
T  18441849 aaacaccttggtgagtgaaaatcattgag 18441821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 19491847 - 19491759
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||   ||||||| ||||||||||||| | ||||| | ||||||||||    
T  19491847 ggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtg 19491759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 40221765 - 40221865
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||   ||||||| ||||||||||||| | ||||| | |||||||||| | |||||||    
T  40221765 ggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattggagag 40221863  T
Q  193 at 194  Q
    ||    
T  40221864 at 40221865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 30143360 - 30143460
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  30143360 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 30143458  T
Q  193 at 194  Q
    ||    
T  30143459 at 30143460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 32902322 - 32902221
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||||||||||| | ||||   ||||||| |||||||   |||||  |||||||||||||| |||||||||  ||||||||||| | |||||    
T  32902322 ggtagaaattatgtttgttcatggagactctgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgagag 32902223  T
Q  193 at 194  Q
    ||    
T  32902222 at 32902221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 1292611 - 1292543
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  1292611 ggtagaaattaagtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 1292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 7597647 - 7597735
Alignment:
Q  106 tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    ||||||||| |||||||||||||| |||||||    ||| |||||||||||||||| ||||||||   ||||||||| | |||||||||    
T  7597647 tttgttcttggagagcttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagat 7597735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 10929819 - 10929863
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  10929819 ggtagaaattatgtttgttctttgtgagcttgttgaagctaattt 10929863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 18655420 - 18655488
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  18655420 ggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 18655488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 27811298 - 27811366
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  27811298 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 27811366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 42435139 - 42435071
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  42435139 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 42435071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 41266988 - 41267083
Alignment:
Q  93 ggtagaaattatgttt-gttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtg 187  Q
    ||||||||||| |||| |||||| |||| |||||||| ||||||||   ||||| ||||||||| ||||| ||||||| |  ||||||||||||||    
T  41266988 ggtagaaattaggttttgttcttagagaacttgttgagactaatttcttgtaactcttttgtatttctttctaaagaacttcttgatagtgaagtg 41267083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 40328799 - 40328900
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaac-ccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||   ||||| | |||||||||||||| | ||||| |  ||||||||| | ||||||    
T  40328799 ggtagaaattaggtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgt-aagaactcattgatagtggattggaga 40328897  T
Q  192 gat 194  Q
    |||    
T  40328898 gat 40328900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 1746432 - 1746399
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  1746432 attgtaaacaccttggtgagtgaaaatcattgag 1746399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 4283544 - 4283644
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | ||||| |||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  4283544 ggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 4283642  T
Q  193 at 194  Q
    ||    
T  4283643 at 4283644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 4731678 - 4731778
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | ||| |||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  4731678 ggtagaaattagggttgctctttgtgagcttgttgaacctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 4731776  T
Q  193 at 194  Q
    ||    
T  4731777 at 4731778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 17982607 - 17982640
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  17982607 attgtaaacaccttggtgagtgaaaatcattgag 17982640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 19945574 - 19945541
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  19945574 attgtaaacaccttggtgagtgaaaatcattgag 19945541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 31218211 - 31218244
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  31218211 attgtaaacaccttggtgagtgaaaatcattgag 31218244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 34254543 - 34254510
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  34254543 attgtaaacaccttggtgagtgaaaatcattgag 34254510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 42498214 - 42498314
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||||||||||| ||||| | ||||| |  ||||||||| | |||||||    
T  42498214 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttctttgt-aagaactcattgatagtggattggagag 42498312  T
Q  193 at 194  Q
    ||    
T  42498313 at 42498314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 44303808 - 44303841
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  44303808 attgtaaacaccttggtgagtgaaaatcattgag 44303841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 1822313 - 1822385
Alignment:
Q  95 tagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||   ||||||||||| ||||| ||| ||||    
T  1822313 tagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatctatttgtaaa 1822385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 1856758 - 1856830
Alignment:
Q  95 tagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||   ||||||||||| ||||| ||| ||||    
T  1856758 tagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatctatttgtaaa 1856830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 3231944 - 3231868
Alignment:
Q  94 gtagaaattatg-tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||||| | ||||||||| | |||||||||||| ||||||||   ||||| |||||||||||||| |||||||    
T  3231944 gtagaaattaggctttgttcttcgtgagcttgttgaagctaattttttttaaccattttgtatctctttgtaaagaa 3231868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 3303818 - 3303750
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||| | |||||||||||||    
T  3303818 ggtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctcttt 3303750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 4162517 - 4162585
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||| ||| ||||||||||||||| ||||||||| |||||||   ||||| | |||||||||||||    
T  4162517 ggtagaagttaggtttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctcttt 4162585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 12702782 - 12702714
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||||||||| |||||||    
T  12702782 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctcttt 12702714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 15212806 - 15212874
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| |||||||||||||    
T  15212806 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 15212874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 42498149 - 42498181
Alignment:
Q  28 ttgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||||    
T  42498149 ttgtaaacaccttggtgagtgaaaatcattgag 42498181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 6598992 - 6599054
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtat 155  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||    
T  6598992 ggtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat 6599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 6674445 - 6674507
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtat 155  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||||| |||||||    
T  6674445 ggtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaacccatttgtat 6674507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Complemental strand, 12702852 - 12702822
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcatt 57  Q
    |||||||||||||||||||||||||||||||    
T  12702852 attgtaaacaccttggtgagtgaaaatcatt 12702822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 30291626 - 30291727
Alignment:
Q  93 ggtagaaattatgttt-gttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| |||| |||||||| |||||||||||| |||||||   ||||| | |||||||| |||| | |||||||  ||||||||| | ||||||    
T  30291626 ggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcactttgt-aagaattctttgatagtggattggaga 30291724  T
Q  192 gat 194  Q
    |||    
T  30291725 gat 30291727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 30909389 - 30909489
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagaga 193  Q
    |||||||||| ||||  |||| ||||||||||| ||||||||||   ||||| | ||||||||||||| ||| | | | |||||||||||| ||||||||    
T  30909389 gtagaaattaggtttactcttggagagcttgtttaaactaatttcttgtaactc-tttgtatctctttgtaatg-actcgttgatagtgaattggagaga 30909486  T
Q  194 tgt 196  Q
    |||    
T  30909487 tgt 30909489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 10240186 - 10240263
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    |||||||||||| |||||||||||| |||||||   |||||| | ||| |||||||| ||||||| |  |||||||||    
T  10240186 gtttgttctttgtgagcttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtg 10240263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 18141841 - 18141940
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| ||| |||||||| |||||||||||| |||||||   ||||||| |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  18141841 ggtagaaattaggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcactttgt-aagaactctttgatagtggattggagag 18141938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 33352170 - 33352270
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||| |||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  33352170 ggtaaaaattagggttgttctttgtgaacttgttgaacctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 33352268  T
Q  193 at 194  Q
    ||    
T  33352269 at 33352270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 34256719 - 34256686
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||| |||||||||||||||    
T  34256719 attgtaaacaccttggtgtgtgaaaatcattgag 34256686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 1746366 - 1746298
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  1746366 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 1746298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 3899198 - 3899250
Alignment:
Q  142 taacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||| ||||| ||||||||| || ||||||  |||||||||||||||||||||    
T  3899198 taactcttttatatctctttgtagagaattctttgatagtgaagtggagagat 3899250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 11384005 - 11384073
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| ||| |||||||| |||||||   ||||| | |||||||||||||    
T  11384005 ggtagaaattagggttgttctttgtgagtttgttgaagctaatttcttgtaactcatttgtatctcttt 11384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 11712136 - 11712076
Alignment:
Q  106 tttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||| |||||||||||||||| |||||||   | ||||||||| ||||||||| ||||    
T  11712136 tttgttccttgagagcttgttgaagctaatttcttgaaacccttttatatctctttgtaaa 11712076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 31218277 - 31218345
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  31218277 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 31218345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 41366762 - 41366718
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||||||||||||||||  |||||||| || |||||||    
T  41366762 ggtagaaattatgtttgttctttgtaagcttgtttaagctaattt 41366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 43036443 - 43036487
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| || |||||||||||||||||    
T  43036443 ggtagaaattagggttgttctttgtgaacttgttgaaactaattt 43036487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 44353813 - 44353881
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||| | |||||||||||||    
T  44353813 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacatttgtatctcttt 44353881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 22079336 - 22079437
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||||||||||||||| ||||||||| || |||||||   |||||| |||||||||||||| ||||||| |  |||||| || | |||||||    
T  22079336 ggtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgatattggattggagag 22079435  T
Q  193 at 194  Q
    ||    
T  22079436 at 22079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 41360934 - 41361022
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtg 182  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||   ||||||| ||||||||||||| | ||||| | ||||||||||    
T  41360934 ggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtg 41361022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 16914324 - 16914218
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaag-taacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    |||| ||||||||||||||||| |||||| ||||||| |||| |||    |||||||||||||||||||| ||||||| |  |||||||||||||| ||     
T  16914324 ggtaaaaattatgtttgttcttggagagcctgttgaagctaagtttcttctaacccttttgtatctctttgtaaagaactcattgatagtgaagtgcagg 16914225  T
Q  192 gatgtct 198  Q
    |||||||    
T  16914224 gatgtct 16914218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 1485992 - 1485799
Alignment:
Q  22 aaacaattgtaaacaccttg-gtgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnng-gtagaaattatgtttgttctttgaga 119  Q
    |||||||||||||||| ||  |||||||||||||||||||  ||||  |||| |  |||||||||       | |||||||||| | || ||||| |||     
T  1485992 aaacaattgtaaacacattaagtgagtgaaaatcattgagtatctttgtcacaggaagagattcgggtaaaagtgtagaaattaggatttttcttggagt 1485893  T
Q  120 gcttgttgaaactaattttaagtaacccttttgtatctctttataaag-aattggttgatagtgaagtggagagatgtctctcctccaaacgta 212  Q
    ||||||||||  ||||||   ||||||||||||||||| ||||||||| || |  ||||||||||||| |||| || ||||||||||| |||||    
T  1485892 gcttgttgaatataatttcttgtaacccttttgtatctatttataaagaaactctttgatagtgaagttgagaaatctctctcctccagacgta 1485799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 4535629 - 4535522
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||| |||||||| |||||   |||||   |||||  |||||||||||||| ||||||| |  |||||||| ||||||||||    
T  4535629 ggtagaaattaagtttgttcttggagagcttattgaagtcaatttcttgtaacatttttgtatctctttgtaaagaactcattgatagttaagtggagag 4535530  T
Q  193 atgtctct 200  Q
    || |||||    
T  4535529 atctctct 4535522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 25652106 - 25652200
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtg 187  Q
    ||||||||||| || |||| |||||||| |||||||| |||||||   ||||| || |||||||||||| ||||||| |  ||||||||||||||    
T  25652106 ggtagaaattaagtgtgttatttgagagtttgttgaagctaatttcttgtaactctcttgtatctctttgtaaagaactctttgatagtgaagtg 25652200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 47255488 - 47255349
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  47255488 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 47255390  T
Q  193 at--gtctctcctccaaacgtaggttattattgggccgaact 232  Q
    ||   ||||||||||| | |||||| ||| |||| |||||||    
T  47255389 atcaatctctcctccaga-gtaggtcattgttggaccgaact 47255349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 3460715 - 3460792
Alignment:
Q  93 ggtagaaattat-gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||||||  |||||||||||| |||||||||||| |||||||   ||||||||||||||| ||||| |||||||    
T  3460715 ggtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaa 3460792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 11348718 - 11348818
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  11348718 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttct-aagaactcattgatagtggattggagag 11348816  T
Q  193 at 194  Q
    ||    
T  11348817 at 11348818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 13549148 - 13549048
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||||||||| || ||||||| | ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  13549148 ggtagaaattagggttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 13549050  T
Q  193 at 194  Q
    ||    
T  13549049 at 13549048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 233
Target Start/End: Complemental strand, 12318671 - 12318532
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||| | |||||||||||||| |||||||   |||||| |||||||| ||||  | ||||| |  |||||| |||||  |||||    
T  12318671 ggtagaaattaggtttgttcatggagagcttgttgaagctaatttcttgtaaccattttgtatgtcttctttaagaactcattgatactgaagcagagag 12318572  T
Q  193 atgtctctcctccaaacgtaggttattattgggccgaacta 233  Q
    || ||||||| ||| | |||| | |||||||| ||||||||    
T  12318571 atctctctcccccata-gtagttcattattggaccgaacta 12318532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 10925245 - 10925343
Alignment:
Q  95 tagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttata--aagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| |||||||||| |||||||||||| |||||||   ||||| | ||||||||||||| ||  |||||||  ||||||||| | ||||||    
T  10925245 tagaaattatggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggattggaga 10925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 194
Target Start/End: Complemental strand, 28220440 - 28220274
Alignment:
Q  27 attgtaaacaccttgg-tgagtgaaaatcattgagcctcttaatcacggagagagattcgnnnnnnnggtagaaattatgtttgttctttgagagcttgt 125  Q
    |||| ||||||||||| ||||||||||||||||||  ||||| |||  | | ||||||||       ||||||||||| | |||||||||| || |||||    
T  28220440 attgaaaacaccttgggtgagtgaaaatcattgagtgtcttattcattg-gtgagattcggaaaatgggtagaaattagggttgttctttgtgaacttgt 28220342  T
Q  126 tgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||||    
T  28220341 tgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagagat 28220274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 6808479 - 6808573
Alignment:
Q  100 attatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||| |||||||||| |||||||||||||| |||| ||   ||||| ||||||||||||||| ||||||| |  || |||||| | |||||||||    
T  6808479 attaggtttgttcttggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagat 6808573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 7482379 - 7482278
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | |||||||||| ||||||||| || |||||||   ||||||| |||||||||||||| | ||||| |  ||||||||||| ||||||    
T  7482379 ggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtgaattggaga 7482281  T
Q  192 gat 194  Q
    |||    
T  7482280 gat 7482278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 9109565 - 9109467
Alignment:
Q  96 agaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagagat 194  Q
    |||||||| |||| | ||| |||| |||||||||  ||||||   ||||||||||||||||||||| |||||||   |||||||||| | |||||||||    
T  9109565 agaaattaagtttttacttggagaacttgttgaagttaatttcttgtaacccttttgtatctctttgtaaagaacacgttgatagtgtattggagagat 9109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 37560017 - 37559916
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaa-ctaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    |||||||||||   |||||||||| || |||||||||| |||||||   ||||||| ||||||||||||| ||| ||| | |||||||||||| ||||||    
T  37560017 ggtagaaattagagttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtgaattggaga 37559919  T
Q  192 gat 194  Q
    |||    
T  37559918 gat 37559916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 928112 - 928051
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    |||||||||||| |||||||||||| |||||||   |||||||||||| |||||||| ||||    
T  928112 gtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttggatctctttgtaaa 928051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 3156885 - 3156985
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  3156885 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 3156983  T
Q  193 at 194  Q
    ||    
T  3156984 at 3156985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 13547237 - 13547137
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| ||| |||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  13547237 ggtagaaattagggttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 13547139  T
Q  193 at 194  Q
    ||    
T  13547138 at 13547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 19754515 - 19754615
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||  ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  19754515 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctctttgt-aagaactcattgatagtggattggagag 19754613  T
Q  193 at 194  Q
    ||    
T  19754614 at 19754615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 20762626 - 20762659
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  20762626 attgtaaacaccttggtgagtgaaaatcattgag 20762659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 28265702 - 28265602
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||| ||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  28265702 ggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactctttgatagtggattggagag 28265604  T
Q  193 at 194  Q
    ||    
T  28265603 at 28265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 31659258 - 31659358
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |  ||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  31659258 ggtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaacttattgatagtggattggagag 31659356  T
Q  193 at 194  Q
    ||    
T  31659357 at 31659358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 49918370 - 49918470
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  49918370 ggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 49918468  T
Q  193 at 194  Q
    ||    
T  49918469 at 49918470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 4552785 - 4552717
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| |||||| ||||| |||||||||||| |||||||   ||||||| |||||||| ||||    
T  4552785 ggtagaaattaggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatcccttt 4552717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 15820327 - 15820395
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    |||| |||||| |||||||||||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  15820327 ggtaaaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctcttt 15820395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 19752706 - 19752774
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||  |||||||||||||    
T  19752706 ggtagaaattagggttgttctttgcgagcttgttgaagctaatttcttgtaaccgatttgtatctcttt 19752774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 37282828 - 37282764
Alignment:
Q  105 gtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaa 169  Q
    |||||||| ||| |||||||||||| |||||||   |||||||||||| |||||||| |||||||    
T  37282828 gtttgttccttgtgagcttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaa 37282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 37168317 - 37168418
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | |||||||||| ||||||||| || |||||||   ||||||| |||||||||||||| | ||||| |  ||||||||| | ||||||    
T  37168317 ggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggattggaga 37168415  T
Q  192 gat 194  Q
    |||    
T  37168416 gat 37168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 47115191 - 47115265
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaa 166  Q
    ||||||||||| | |||||||||| ||||||||| || |||||||   ||||||| |||||||||||||| ||||    
T  47115191 ggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaaa 47115265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 3156820 - 3156853
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||| |||||||||||||||||||||    
T  3156820 attgtaaacaccctggtgagtgaaaatcattgag 3156853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 3189285 - 3189318
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||| ||||    
T  3189285 attgtaaacaccttggtgagtgaaaatcactgag 3189318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 3198102 - 3198135
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||| ||||    
T  3198102 attgtaaacaccttggtgagtgaaaatcactgag 3198135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 3206941 - 3206974
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||| ||||    
T  3206941 attgtaaacaccttggtgagtgaaaatcactgag 3206974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 8550935 - 8550835
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| ||||||||| || |||||||   ||||| | |||||||| |||| | ||||| |  ||||||||| | |||||||    
T  8550935 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttgt-aagaactcattgatagtggattggagag 8550837  T
Q  193 at 194  Q
    ||    
T  8550836 at 8550835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 24215148 - 24215189
Alignment:
Q  174 ttgatagtgaagtggagagatgtctctcctccaaacgtaggt 215  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  24215148 ttgatagtgaattggagagatctctctcctccagacgtaggt 24215189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 28223569 - 28223469
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||||| ||| |||||  || ||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  28223569 ggtagaaattatggttgatctttctgaacttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 28223471  T
Q  193 at 194  Q
    ||    
T  28223470 at 28223469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 31925855 - 31925755
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |  ||||| ||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  31925855 ggtagaaattagggatgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 31925757  T
Q  193 at 194  Q
    ||    
T  31925756 at 31925755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 41135840 - 41135949
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||  |||||||||  ||| ||| |||||  ||||||   |||| |||||||||||| ||| ||||||| | ||||||| |||||  |||||    
T  41135840 ggtagaaattagatttgttcttgaagaactttttgaagttaatttcttgtaaaccttttgtatctatttgtaaagaactcgttgatactgaagcagagag 41135939  T
Q  193 atgtctctcc 202  Q
    || |||||||    
T  41135940 atctctctcc 41135949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 44455180 - 44455280
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||||||||||||||   ||||| | ||||||||| ||| | ||||| |  ||||||||| | |||||||    
T  44455180 ggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaactcatttgtatctttttgt-aagaactcattgatagtggattggagag 44455278  T
Q  193 at 194  Q
    ||    
T  44455279 at 44455280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 51765349 - 51765382
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||| |||||||||||    
T  51765349 attgtaaacaccttggtgagtgtaaatcattgag 51765382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 13316500 - 13316432
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  13316500 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 13316432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 23555413 - 23555369
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| || |||||||||||||||||    
T  23555413 ggtagaaattagggttgttctttgtgaacttgttgaaactaattt 23555369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 29136267 - 29136311
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  29136267 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 29136311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 37033221 - 37033177
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  37033221 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 37033177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 37879059 - 37879015
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  37879059 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 37879015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 42298123 - 42298055
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | ||||| |||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  42298123 ggtagaaattagggttgttttttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 42298055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 490468 - 490368
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagaga 193  Q
    |||||||||| |||||||||| |||||||||||||| |||||||   ||||| ||||||||| ||||| ||||| | |  |||||||||||| |||||||    
T  490468 gtagaaattaagtttgttcttggagagcttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtgaagcggagaga 490369  T
Q  194 t 194  Q
    |    
T  490368 t 490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 434553 - 434621
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  434553 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 434621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 25073 - 25180
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||| ||  ||||||||||||||| ||||||||  ||||||   |||||| |||||||||||||| ||||||| |  ||||||||||||| |||||    
T  25073 ggtagaaactagttttgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtgaagtagagag 25172  T
Q  193 atgtctct 200  Q
    || |||||    
T  25173 atctctct 25180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 2973087 - 2972987
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  2973087 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 2972989  T
Q  193 at 194  Q
    ||    
T  2972988 at 2972987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 3808857 - 3808711
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaaccc-ttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||   ||||||| |||||||||||||| | ||||| |  ||||||||| | ||||||    
T  3808857 ggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgt-aagaactcattgatagtggattggaga 3808759  T
Q  192 gat--gtctctcctccaaacgtaggttattattgggccgaactatgtga 238  Q
    |||   ||||||||||| | |||||| || ||||| |||||||| ||||    
T  3808758 gatcaatctctcctccaga-gtaggtcatgattggaccgaactaggtga 3808711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 17758043 - 17758143
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  17758043 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 17758141  T
Q  193 at 194  Q
    ||    
T  17758142 at 17758143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 21588951 - 21589051
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  21588951 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 21589049  T
Q  193 at 194  Q
    ||    
T  21589050 at 21589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 21593684 - 21593784
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  21593684 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 21593782  T
Q  193 at 194  Q
    ||    
T  21593783 at 21593784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 12221247 - 12221155
Alignment:
Q  98 aaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggag 190  Q
    |||||| ||||||||||  |||  | |||||||||||||||  ||||| |||||||||| |||| |||||||||  |||| ||||||||||||    
T  12221247 aaattaggtttgttcttgaagaattcgttgaaactaattttttgtaactcttttgtatcactttgtaaagaattaattgacagtgaagtggag 12221155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 5043648 - 5043715
Alignment:
Q  94 gtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    |||||||||| |||||||||||| |||||||||||| |||||||   ||||| | |||||||||||||    
T  5043648 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 5043715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 2171744 - 2171711
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  2171744 attgtaaacaccttggtgagtgaaaatcattgag 2171711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5406412 - 5406379
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  5406412 attgtaaacaccttggtgagtgaaaatcattgag 5406379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5410737 - 5410704
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  5410737 attgtaaacaccttggtgagtgaaaatcattgag 5410704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 16452543 - 16452510
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  16452543 attgtaaacaccttggtgagtgaaaatcattgag 16452510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 31404887 - 31404854
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  31404887 attgtaaacaccttggtgagtgaaaatcattgag 31404854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 191
Target Start/End: Complemental strand, 603222 - 603139
Alignment:
Q  107 ttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggaga 191  Q
    |||||||||| |||||||||||| |||||||   ||||||| ||||||||||||| | ||||| | |||||||||| | ||||||    
T  603222 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcgttgatagtggattggaga 603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Original strand, 186734 - 186812
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaatt 171  Q
    ||||||||| | |||||||||| ||||||||||||||  ||| |||   || | ||||||||||||||| |||||||||    
T  186734 ggtagaaataaggtttgttcttggagagcttgttgaagttaaatttttatagctcttttgtatctctttgtaaagaatt 186812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 60
Target Start/End: Complemental strand, 6097643 - 6097613
Alignment:
Q  30 gtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||||||||||||    
T  6097643 gtaaacaccttggtgagtgaaaatcattgag 6097613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 208
Target Start/End: Complemental strand, 26830271 - 26830155
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    |||||||||||   |||||||||| |||||||||||| |||||||   |||| || ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  26830271 ggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctctttgt-aagaactcattgatagtggattggagag 26830173  T
Q  193 at--gtctctcctccaaa 208  Q
    ||   |||||||||||||    
T  26830172 atcaatctctcctccaaa 26830155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 5406348 - 5406248
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  5406348 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 5406250  T
Q  193 at 194  Q
    ||    
T  5406249 at 5406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 5410673 - 5410573
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  5410673 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 5410575  T
Q  193 at 194  Q
    ||    
T  5410574 at 5410573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 5413542 - 5413442
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  5413542 ggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 5413444  T
Q  193 at 194  Q
    ||    
T  5413443 at 5413442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 5413606 - 5413573
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||| ||||||||||||||||||||||    
T  5413606 attgtaaacacattggtgagtgaaaatcattgag 5413573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 9183179 - 9183079
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||  |||||||| |||||||   ||||||| ||||||||||||| | ||||| |  ||||||||| | |||||||    
T  9183179 ggtagaaattagggttgttctttgtgaatttgttgaagctaatttcttgtaacccatttgtatctctttgt-aagaactcattgatagtggattggagag 9183081  T
Q  193 at 194  Q
    ||    
T  9183080 at 9183079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 22615994 - 22616063
Alignment:
Q  96 agaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataa 165  Q
    |||||||| | ||||| || ||||||||||||||||| ||||   |||| || |||||||||||||||||    
T  22615994 agaaattaagattgtttttagagagcttgttgaaactgatttcttgtaatccctttgtatctctttataa 22616063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 28137556 - 28137456
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| ||||||||| || |||||||   ||||||| ||||||| ||||| | ||||| |  ||||||||| | |||||||    
T  28137556 ggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatttctttgt-aagaactcattgatagtggattggagag 28137458  T
Q  193 at 194  Q
    ||    
T  28137457 at 28137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 30834750 - 30834717
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||| ||||||||||||||||||||    
T  30834750 attgtaaacacctcggtgagtgaaaatcattgag 30834717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 31404823 - 31404723
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   ||||||||||||||||||||| | ||||| |  ||||||||| | |||||||    
T  31404823 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgt-aagaactcattgatagtggattggagag 31404725  T
Q  193 at 194  Q
    ||    
T  31404724 at 31404723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 3039051 - 3038983
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||| ||| |||||| ||||| |||||||   ||||||| |||||||||||||    
T  3039051 ggtagaaattagggttgttcattgtgagctttttgaagctaatttcttgtaacccatttgtatctcttt 3038983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 17763010 - 17763054
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  17763010 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 17763054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 30834684 - 30834616
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  30834684 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 30834616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 7347 - 7415
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||   ||||||| |||||||||||||    
T  7347 ggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 871 - 904
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  871 attgtaaacaccttggtgagtgaaaatcattgag 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 936 - 1004
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||    
T  936 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttt 1004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 11512 - 11545
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  11512 attgtaaacaccttggtgagtgaaaatcattgag 11545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 27591 - 27490
Alignment:
Q  94 gtagaaattatgt-ttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||||| ||||||||  ||||||||||||| |||||||   ||||| | ||||||||||||| |||| || |  ||||||||| | |||||||    
T  27591 gtagaaattatgtattgttcttgaagagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagag 27492  T
Q  193 at 194  Q
    ||    
T  27491 at 27490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 114557 - 114590
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    ||||||||||||||||||||||||||||||||||    
T  114557 attgtaaacaccttggtgagtgaaaatcattgag 114590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 11310 - 11211
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaagaattggttgatagtgaagtggagag 192  Q
    ||||||||||| | |||||||||| || |||||  || |||||||   |||||||||||||||||||||   ||||| | |||||||||| | |||||||    
T  11310 ggtagaaattagggttgttctttgtgaacttgtaaaatctaatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagag 11211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 11375 - 11342
Alignment:
Q  27 attgtaaacaccttggtgagtgaaaatcattgag 60  Q
    |||||||||||||||||||||| |||||||||||    
T  11375 attgtaaacaccttggtgagtgtaaatcattgag 11342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 18151 - 18078
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctctttataaa 166  Q
    ||||||||||| | |||||| ||| |||||||||||| |||||||   ||||| | ||||||||||||| ||||    
T  18151 ggtagaaattagggttgttcattgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaa 18078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 20560 - 20495
Alignment:
Q  96 agaaattatgtttgttctttgagagcttgttgaaactaattttaagtaacccttttgtatctcttt 161  Q
    |||||||| ||||||| |||| || ||||||||| |||||||   ||||||| |||||||||||||    
T  20560 agaaattaggtttgttttttgtgaacttgttgaagctaatttcttgtaacccatttgtatctcttt 20495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 80431 - 80387
Alignment:
Q  93 ggtagaaattatgtttgttctttgagagcttgttgaaactaattt 137  Q
    ||||||||||| | |||||||||| |||||||||||| |||||||    
T  80431 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 80387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University