View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20373_high_4 (Length: 342)

Name: NF20373_high_4
Description: NF20373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20373_high_4
NF20373_high_4
[»] scaffold1431 (1 HSPs)
scaffold1431 (13-152)||(37-176)
[»] chr7 (19 HSPs)
chr7 (13-152)||(10981508-10981647)
chr7 (13-152)||(27813811-27813950)
chr7 (13-154)||(40348958-40349099)
chr7 (13-146)||(36453262-36453395)
chr7 (151-324)||(22200226-22200402)
chr7 (151-324)||(22237419-22237595)
chr7 (13-152)||(47110451-47110588)
chr7 (13-145)||(25614491-25614621)
chr7 (20-93)||(3091576-3091649)
chr7 (13-92)||(27942177-27942256)
chr7 (20-93)||(7743542-7743614)
chr7 (15-102)||(16662146-16662231)
chr7 (15-102)||(17636506-17636591)
chr7 (23-93)||(16360443-16360511)
chr7 (13-87)||(3498892-3498966)
chr7 (99-152)||(25060133-25060186)
chr7 (99-152)||(2911548-2911601)
chr7 (111-152)||(25059450-25059491)
chr7 (24-61)||(28200298-28200335)
[»] chr6 (20 HSPs)
chr6 (13-152)||(1605579-1605718)
chr6 (13-152)||(29260192-29260331)
chr6 (13-145)||(30734621-30734753)
chr6 (13-152)||(13757208-13757347)
chr6 (13-152)||(7761301-7761438)
chr6 (13-152)||(8626482-8626621)
chr6 (13-137)||(31559874-31559998)
chr6 (13-152)||(15064832-15064971)
chr6 (13-137)||(8235639-8235763)
chr6 (13-152)||(4129435-4129566)
chr6 (13-152)||(17942443-17942584)
chr6 (37-148)||(30734772-30734881)
chr6 (15-93)||(21277574-21277651)
chr6 (22-93)||(3798162-3798233)
chr6 (15-93)||(14287048-14287125)
chr6 (99-152)||(19996715-19996768)
chr6 (20-93)||(11370630-11370703)
chr6 (111-152)||(19996322-19996363)
chr6 (124-156)||(22054768-22054800)
chr6 (15-55)||(30235447-30235487)
[»] chr4 (26 HSPs)
chr4 (13-152)||(12071561-12071700)
chr4 (13-152)||(25704651-25704790)
chr4 (13-153)||(34324720-34324861)
chr4 (13-145)||(24706385-24706517)
chr4 (13-152)||(21310425-21310564)
chr4 (13-145)||(22321405-22321537)
chr4 (13-152)||(14261044-14261183)
chr4 (13-152)||(40122623-40122762)
chr4 (13-145)||(44568844-44568976)
chr4 (13-152)||(21661673-21661812)
chr4 (13-152)||(21670437-21670576)
chr4 (13-145)||(50767871-50768003)
chr4 (13-152)||(20249151-20249289)
chr4 (37-142)||(1988046-1988150)
chr4 (13-146)||(31892244-31892373)
chr4 (15-93)||(20714488-20714566)
chr4 (15-101)||(32543532-32543617)
chr4 (15-127)||(19692748-19692860)
chr4 (15-127)||(19703333-19703445)
chr4 (20-102)||(6129093-6129175)
chr4 (23-152)||(26676714-26676843)
chr4 (29-92)||(34284171-34284234)
chr4 (15-84)||(18507404-18507472)
chr4 (13-80)||(21064834-21064899)
chr4 (15-104)||(48652268-48652356)
chr4 (15-55)||(51777715-51777755)
[»] chr1 (32 HSPs)
chr1 (13-152)||(23045417-23045556)
chr1 (17-152)||(284333-284468)
chr1 (13-152)||(321626-321765)
chr1 (13-152)||(40783795-40783934)
chr1 (13-145)||(47037990-47038120)
chr1 (13-152)||(46771637-46771776)
chr1 (13-152)||(24772043-24772182)
chr1 (13-151)||(27211102-27211240)
chr1 (13-141)||(23526251-23526379)
chr1 (13-130)||(33082767-33082884)
chr1 (13-137)||(52037260-52037382)
chr1 (13-102)||(1749357-1749446)
chr1 (11-94)||(7765071-7765154)
chr1 (24-93)||(1837978-1838045)
chr1 (15-81)||(31003926-31003992)
chr1 (99-152)||(3943060-3943113)
chr1 (99-152)||(9588670-9588723)
chr1 (15-84)||(31061594-31061662)
chr1 (99-152)||(41959078-41959131)
chr1 (15-158)||(51064893-51065039)
chr1 (15-94)||(18396753-18396832)
chr1 (30-104)||(3657125-3657199)
chr1 (99-145)||(13984991-13985037)
chr1 (15-104)||(52478016-52478103)
chr1 (27-92)||(40562733-40562797)
chr1 (111-152)||(44227848-44227889)
chr1 (111-155)||(3943763-3943807)
chr1 (15-102)||(27143151-27143239)
chr1 (23-104)||(40261419-40261501)
chr1 (89-138)||(40564244-40564293)
chr1 (111-152)||(41959809-41959850)
chr1 (110-146)||(44228239-44228275)
[»] chr8 (25 HSPs)
chr8 (13-155)||(11174361-11174503)
chr8 (13-194)||(40058441-40058620)
chr8 (13-146)||(2540069-2540202)
chr8 (17-152)||(3585451-3585586)
chr8 (13-152)||(43275537-43275674)
chr8 (17-152)||(11646467-11646602)
chr8 (13-152)||(37345571-37345710)
chr8 (13-154)||(7146911-7147052)
chr8 (13-145)||(30999661-30999791)
chr8 (13-152)||(40918869-40919006)
chr8 (17-152)||(36068080-36068215)
chr8 (13-152)||(27034997-27035135)
chr8 (13-152)||(20546427-20546564)
chr8 (15-93)||(13881094-13881173)
chr8 (13-104)||(37510314-37510405)
chr8 (15-145)||(35866621-35866751)
chr8 (20-146)||(28562427-28562554)
chr8 (15-104)||(28326797-28326883)
chr8 (99-152)||(8697898-8697951)
chr8 (99-152)||(41307961-41308014)
chr8 (99-152)||(45278701-45278754)
chr8 (99-146)||(10646598-10646645)
chr8 (99-152)||(40486453-40486506)
chr8 (111-152)||(41305762-41305803)
chr8 (20-94)||(10181002-10181075)
[»] chr2 (15 HSPs)
chr2 (13-154)||(39938168-39938309)
chr2 (13-152)||(3518908-3519047)
chr2 (13-151)||(23366790-23366928)
chr2 (13-154)||(1102501-1102642)
chr2 (25-153)||(37673887-37674015)
chr2 (13-152)||(12969877-12970016)
chr2 (13-124)||(1646317-1646426)
chr2 (13-75)||(22388273-22388335)
chr2 (15-99)||(14779832-14779914)
chr2 (37-104)||(35179097-35179164)
chr2 (99-152)||(34224378-34224431)
chr2 (15-93)||(18078115-18078193)
chr2 (15-104)||(19976380-19976468)
chr2 (25-93)||(39562037-39562103)
chr2 (124-156)||(44365153-44365185)
[»] chr5 (18 HSPs)
chr5 (13-153)||(25773648-25773788)
chr5 (13-152)||(10285195-10285334)
chr5 (13-152)||(12806991-12807130)
chr5 (13-152)||(30720630-30720769)
chr5 (13-145)||(40886748-40886880)
chr5 (13-145)||(36561237-36561369)
chr5 (13-152)||(37900762-37900901)
chr5 (13-141)||(7277560-7277688)
chr5 (13-106)||(25683366-25683459)
chr5 (27-102)||(23098386-23098461)
chr5 (15-104)||(30403101-30403191)
chr5 (18-152)||(16983258-16983393)
chr5 (15-146)||(734478-734608)
chr5 (15-146)||(11319565-11319696)
chr5 (110-155)||(15305223-15305268)
chr5 (15-93)||(39070942-39071020)
chr5 (15-101)||(1056422-1056507)
chr5 (44-104)||(11796499-11796559)
[»] chr3 (29 HSPs)
chr3 (13-152)||(13364843-13364982)
chr3 (13-145)||(3383083-3383215)
chr3 (13-157)||(46694248-46694392)
chr3 (13-152)||(198855-198994)
chr3 (13-152)||(23088069-23088208)
chr3 (17-152)||(19241810-19241945)
chr3 (13-152)||(36881282-36881419)
chr3 (13-152)||(29375138-29375277)
chr3 (13-152)||(43750137-43750276)
chr3 (48-145)||(32835129-32835226)
chr3 (31-137)||(13702784-13702890)
chr3 (74-152)||(27707363-27707441)
chr3 (20-101)||(37780988-37781069)
chr3 (15-93)||(19897067-19897145)
chr3 (99-152)||(12094582-12094635)
chr3 (13-64)||(27707126-27707177)
chr3 (111-152)||(12095423-12095464)
chr3 (99-152)||(19911509-19911562)
chr3 (111-152)||(44276775-44276816)
chr3 (99-152)||(44277455-44277508)
chr3 (15-103)||(18356007-18356095)
chr3 (23-86)||(17755221-17755284)
chr3 (23-86)||(19056541-19056604)
chr3 (24-93)||(1455297-1455366)
chr3 (20-61)||(6901655-6901696)
chr3 (111-152)||(19912174-19912215)
chr3 (99-152)||(38805245-38805298)
chr3 (111-152)||(38806341-38806382)
chr3 (133-181)||(42791253-42791301)
[»] scaffold0054 (1 HSPs)
scaffold0054 (13-152)||(45454-45593)
[»] scaffold1770 (1 HSPs)
scaffold1770 (13-152)||(170-301)
[»] scaffold0062 (1 HSPs)
scaffold0062 (13-137)||(403-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-102)||(70874-70961)
[»] scaffold0025 (1 HSPs)
scaffold0025 (13-86)||(65301-65375)
[»] scaffold0257 (1 HSPs)
scaffold0257 (99-153)||(23466-23520)


Alignment Details
Target: scaffold1431 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 37 - 176
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  37 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 136  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  137 tttctccaaaatggacatgtattttgaaacggagagagta 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 10981647 - 10981508
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  10981647 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 10981548  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  10981547 tttctccaaaatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 27813950 - 27813811
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  27813950 aaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 27813851  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  27813850 tttctccaaaatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 40349099 - 40348958
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||    
T  40349099 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 40349000  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtact 154  Q
    |||||||||||||||||| ||||||||||||||  |||||||    
T  40348999 tttctccaaaatggacatgtattttgaaacggaaggagtact 40348958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 36453262 - 36453395
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||    
T  36453262 aaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggttagtgcaa 36453361  T
Q  113 tttctccaaaatggacatatattttgaaacggag 146  Q
    |||||||||||||||||| |||||||||||||||    
T  36453362 tttctccaaaatggacatgtattttgaaacggag 36453395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 151 - 324
Target Start/End: Original strand, 22200226 - 22200402
Alignment:
Q  151 tactatatttatttccttaaccagtgcctcgagatcatttattagttttgttcatgtaataaaattttaaagacaatatttctaagtcttg----nnnnn 246  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||             
T  22200226 tactatatttacttccttaaccagtgcc-cgggatcatttattagttttgtttatgtaataaaattttaaagacaatatttctaagccttgttttttttt 22200324  T
Q  247 nnnngctgaagcagaaccacgagtaactagttctgagtaactatgcccaaatgttcatgcaaaattacatgaaatttg 324  Q
        |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22200325 ttttgctgaagcagaaccaccagtaactagttctgagtaactatgcccaaatgttcatgcaaaattacattaaatttg 22200402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 151 - 324
Target Start/End: Complemental strand, 22237595 - 22237419
Alignment:
Q  151 tactatatttatttccttaaccagtgcctcgagatcatttattagttttgttcatgtaataaaattttaaagacaatatttctaagtcttg----nnnnn 246  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||             
T  22237595 tactatatttacttccttaaccagtgcc-cgggatcatttattagttttgtttatgtaataaaattttaaagacaatatttctaagccttgttttttttt 22237497  T
Q  247 nnnngctgaagcagaaccacgagtaactagttctgagtaactatgcccaaatgttcatgcaaaattacatgaaatttg 324  Q
        |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22237496 ttttgctgaagcagaaccaccagtaactagttctgagtaactatgcccaaatgttcatgcaaaattacattaaatttg 22237419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 47110588 - 47110451
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  47110588 aaaataaaataaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaa 47110491  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||| |||| |||||    
T  47110490 tttctccaaaatggacatgtattttgaaatggagggagta 47110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 25614491 - 25614621
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||| |||    
T  25614491 aaaataaaatgaaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggttagtgcaa 25614588  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||| ||||||||||||||    
T  25614589 tttctccaaaatggacatgtattttgaaacgga 25614621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 3091649 - 3091576
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||||||||||||||| ||||||||||||||||||| ||||| | | ||||||||||||||||||||| |||||    
T  3091649 aatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttattt 3091576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 27942177 - 27942256
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatt 92  Q
    |||||| |||||||||||||||| |||| |||||||||||||| ||||||||| | |||| |||||||| ||||| ||||    
T  27942177 aaaatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 7743542 - 7743614
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    ||||||||||||||| ||||| |||||||||| ||| | ||||||| ||||||||||||||||||||| |||||    
T  7743542 aatgaaataataaataattaacggtattatag-aaagaaacacataatttcatcaaaaataacaaaatttattt 7743614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 16662231 - 16662146
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  ||||||||||||||||||||| |||||  |||||||    
T  16662231 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 17636591 - 17636506
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  ||||||||||||||||||||| |||||  |||||||    
T  17636591 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 16360511 - 16360443
Alignment:
Q  23 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    ||||||||||||| ||||||||||||||||||  | ||||| | ||||||||||||||||||||| |||||    
T  16360511 gaaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttattt 16360443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 3498892 - 3498966
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat 87  Q
    ||||||||||||||||||||||| ||||  ||||||||||||| | ||| | | |||||| ||||||||||||||    
T  3498892 aaaataaaatgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaat 3498966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 25060133 - 25060186
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 2911548 - 2911601
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| |||||||||| |||| |||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagta 2911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 25059491 - 25059450
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| |||||||||||||||| ||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggagaaagta 25059450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 28200335 - 28200298
Alignment:
Q  24 aaataataaatgattaagggtattatagaaaacacaca 61  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28200335 aaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 1605718 - 1605579
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  1605718 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 1605619  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  1605618 tttctccaaaatggacatgtattttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 29260331 - 29260192
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  29260331 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 29260232  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  29260231 tttctccaaaatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 30734621 - 30734753
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  30734621 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 30734720  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||| ||||||||||||||    
T  30734721 tttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 13757347 - 13757208
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  ||    
T  13757347 aaaataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaa 13757248  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  13757247 tttctccaaaatggacatgtattttgaaacggagagagta 13757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 7761438 - 7761301
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||| |||    
T  7761438 aaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaa 7761341  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  7761340 tttctccaaaatggacatgtattttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 8626621 - 8626482
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||    
T  8626621 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaa 8626522  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||| |||||||||||| ||||||||||||||| |||||    
T  8626521 tttcttcaaaatggacatgtattttgaaacggagggagta 8626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 31559874 - 31559998
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||  ||| ||||||| | |||    
T  31559874 aaaaaaaaatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaa 31559973  T
Q  113 tttctccaaaatggacatatatttt 137  Q
    |||||||||||||||||| ||||||    
T  31559974 tttctccaaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 15064832 - 15064971
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||  | |||    
T  15064832 aaaatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaa 15064931  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||| ||||||||||| ||||||||||||||| |||||    
T  15064932 tttctctaaaatggacatgtattttgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 8235763 - 8235639
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| | ||||| |||||||||||| | |||    
T  8235763 aaaatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaa 8235664  T
Q  113 tttctccaaaatggacatatatttt 137  Q
    ||||| ||||||| |||| ||||||    
T  8235663 tttcttcaaaatgtacatgtatttt 8235639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 4129566 - 4129435
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||        ||||||| | |||    
T  4129566 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttat--------ttggttactgcaa 4129475  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||| |||| || ||||||||||||||| |||||    
T  4129474 tttctccaaagtggatatgtattttgaaacggagggagta 4129435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 17942584 - 17942443
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaat--aacaaaatctatttagtttcttggttagtac 110  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||  || ||||  ||||| |||||||||||| | |    
T  17942584 aaaataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggttactgc 17942485  T
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| |||||||||||| || |||||    
T  17942484 aatttctcaaaaatggacatgtattttgaaacgaagggagta 17942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 148
Target Start/End: Original strand, 30734772 - 30734881
Alignment:
Q  37 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctccaaaatggacatatattt 136  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||| |||||  ||| || |||| | |||||||| |||||||||||| |||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  137 tgaaacggagag 148  Q
    ||||||||||||    
T  30734870 tgaaacggagag 30734881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 21277574 - 21277651
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||| |||||| || ||||| |||||||||||||||||||| ||||| | |||||||| |||||||||||||| |||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttattt 21277651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 3798233 - 3798162
Alignment:
Q  22 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    ||||||||||||||  ||||||| |||||||||| ||||| |||  ||||| |||||||||||||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttattt 3798162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 14287125 - 14287048
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    ||||||||||||||||||| |  |||||||||||||||||| |  |||| | |||||| |||||||||||||| |||||    
T  14287125 aataaaatgaaataataaaggggtaagggtattatagaaaa-aagcacagaatttcataaaaaataacaaaatttattt 14287048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 19996715 - 19996768
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||| ||||| ||||||||||||||| |||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 19996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 11370630 - 11370703
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||| ||||||||||| ||||| |||||||| |||| |||||   | | ||||||||||||||||||| |||||    
T  11370630 aatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttattt 11370703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 19996363 - 19996322
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 22054800 - 22054768
Alignment:
Q  124 tggacatatattttgaaacggagagagtactat 156  Q
    ||||||| |||||||||||||||||||||||||    
T  22054800 tggacatgtattttgaaacggagagagtactat 22054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 30235447 - 30235487
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaa 55  Q
    |||| |||||||||||||||||||||| ||| |||||||||    
T  30235447 aatagaatgaaataataaatgattaagagtaatatagaaaa 30235487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 12071700 - 12071561
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||    
T  12071700 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaa 12071601  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  12071600 tttctccaaaatggacatgtattttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 25704790 - 25704651
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  25704790 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 25704691  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  25704690 tttctccaaaatggacatgtattttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 34324720 - 34324861
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatct-atttagtttcttggttagtaca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  34324720 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgca 34324819  T
Q  112 atttctccaaaatggacatatattttgaaacggagagagtac 153  Q
    ||||||||||||||||||| ||||||||||||||| ||||||    
T  34324820 atttctccaaaatggacatgtattttgaaacggagggagtac 34324861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 24706385 - 24706517
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  24706385 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 24706484  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||| ||||||||||||||    
T  24706485 tttctccaaaatggacatgtattttgaaacgga 24706517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 21310564 - 21310425
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  21310564 aaaaaaaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 21310465  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  21310464 tttctccaaaatggacatgtattttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 22321405 - 22321537
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||    
T  22321405 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaa 22321504  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||| ||||||||||||||    
T  22321505 tttctccaaaatggacatgtattttgaaacgga 22321537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 14261183 - 14261044
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||    
T  14261183 aaaataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggttagtgcaa 14261084  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  14261083 tttctccaaaatggacatgtattttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 40122623 - 40122762
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| | |||    
T  40122623 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggttactgcaa 40122722  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  40122723 tttctccaaaatggacatgtattttgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 44568976 - 44568844
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||| |||    
T  44568976 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggttagtgcaa 44568877  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    ||||| |||||||||||| ||||||||||||||    
T  44568876 tttcttcaaaatggacatgtattttgaaacgga 44568844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 21661673 - 21661812
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| | |||    
T  21661673 aaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggttactgcaa 21661772  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||| |||| |||||    
T  21661773 tttctccaaaatggacatgtattttgaaagggagggagta 21661812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 21670437 - 21670576
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| | |||    
T  21670437 aaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggttactgcaa 21670536  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||| |||| |||||    
T  21670537 tttctccaaaatggacatgtattttgaaagggagggagta 21670576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 50768003 - 50767871
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||| |||    
T  50768003 aaaataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaa 50767904  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||| |||||| | || ||||||||||||||    
T  50767903 tttctctaaaatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 20249151 - 20249289
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||| |||||||||||| |||||    
T  20249151 aaaatagaataaaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaa 20249249  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||| |||||||||||||| |||||||||||||||||||||    
T  20249250 tttatccaaaatggacatgtattttgaaacggagagagta 20249289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 1988150 - 1988046
Alignment:
Q  37 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctccaaaatggacatatattt 136  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||  |||||| |||| | |||||||||| |||| |||||||||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctcc-aaatagacatatattt 1988052  T
Q  137 tgaaac 142  Q
    | ||||    
T  1988051 taaaac 1988046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 31892373 - 31892244
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| | || ||||||||||||||||||    || ||||||||||||||| ||||| |||||  ||||||||||| | |||    
T  31892373 aaaatagaatgaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaa 31892278  T
Q  113 tttctccaaaatggacatatattttgaaacggag 146  Q
    |||||  |||||| |||| |||||||| ||||||    
T  31892277 tttctttaaaatgaacatgtattttgatacggag 31892244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 20714488 - 20714566
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||| |||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  20714488 aatataatgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttattt 20714566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 32543617 - 32543532
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttctt 101  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| | | ||||||||||| ||||||||  ||||| |||||||    
T  32543617 aataaaatgaaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 19692860 - 19692748
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatt 114  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| || |||||  |||||||||  ||| ||||    
T  19692860 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19692761  T
Q  115 tctccaaaatgga 127  Q
    ||| |||||||||    
T  19692760 tcttcaaaatgga 19692748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 19703445 - 19703333
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatt 114  Q
    |||| ||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| || |||||  |||||||||  ||| ||||    
T  19703445 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19703346  T
Q  115 tctccaaaatgga 127  Q
    ||| |||||||||    
T  19703345 tcttcaaaatgga 19703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 6129093 - 6129175
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    |||||||||||||||||||||||||||| ||||||| | ||| | | ||| ||||||||||||||||| |||||  |||||||    
T  6129093 aatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttg 6129175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 26676714 - 26676843
Alignment:
Q  23 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctccaaa 122  Q
    |||||||||||||| |||||||||||||||||| ||||  | | |||||| |||||| |||| || |||||  || ||||||  ||  ||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  123 atggacatatattttgaaacggagagagta 152  Q
    ||||| |  |||| ||||||||||||||||    
T  26676814 atggataagtattgtgaaacggagagagta 26676843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 34284171 - 34284234
Alignment:
Q  29 ataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatt 92  Q
    |||||| |||||||||||||||||||| | ||| ||| ||||||||||| ||||||||| ||||    
T  34284171 ataaataattaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 18507404 - 18507472
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 84  Q
    |||| |||||||||||||||  | |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  18507404 aatataatgaaataataaattgtcaagg-tattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 21064899 - 21064834
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 80  Q
    |||||| |||||||||||||||  ||||| |||||||  |||| ||||||||| ||||||||||||||    
T  21064899 aaaatagaatgaaataataaatagttaagagtattat--aaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 48652356 - 48652268
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||| ||||||||||||||||| |||  || ||| |||||| | ||| | | ||||||||||||||||||||| |||||  |||||||||    
T  48652356 aatataatgaaataataaatgagtaaatgtgttaaagaaaa-atacaaagaatttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 51777755 - 51777715
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaa 55  Q
    ||||| ||||||||||||||| ||||| |||||||||||||    
T  51777755 aataacatgaaataataaatggttaagagtattatagaaaa 51777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 23045417 - 23045556
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  23045417 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 23045516  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  23045517 tttctccaaaatggacatgtattttgaaacggagggagta 23045556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 284468 - 284333
Alignment:
Q  17 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  284468 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 284369  T
Q  117 tccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||| ||||||||||||||| |||||    
T  284368 tccaaaatggacatgtattttgaaacggagggagta 284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 321765 - 321626
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  321765 aaaataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 321666  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||||||||||| |||| ||||||||||||||| |||||    
T  321665 tttctccaaaatgaacatgtattttgaaacggagggagta 321626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 40783795 - 40783934
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||    
T  40783795 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 40783894  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||||||||||| |||| ||||||||||||||| |||||    
T  40783895 tttctccaaaatgaacatgtattttgaaacggagggagta 40783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 47037990 - 47038120
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  47037990 aaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagttagtacaa 47038087  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||| ||||||||||||||    
T  47038088 tttctccaaaatggacatgtattttgaaacgga 47038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 46771776 - 46771637
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||| | |||    
T  46771776 aaaatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaa 46771677  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||||||| ||||||    
T  46771676 tttctccaaaatggacatgtattttgaaacggatagagta 46771637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 24772043 - 24772182
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||    
T  24772043 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 24772142  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||| |||||||||||| ||||||||||||||| |||||    
T  24772143 tttcttcaaaatggacatgtattttgaaacggagggagta 24772182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 27211102 - 27211240
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||| |||||||||||| | |||    
T  27211102 aaaatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaa 27211201  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagt 151  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  27211202 tttctccaaaatggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 23526379 - 23526251
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||| | |||    
T  23526379 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaa 23526280  T
Q  113 tttctccaaaatggacatatattttgaaa 141  Q
    ||||||||||||| |||| ||||||||||    
T  23526279 tttctccaaaatgaacatgtattttgaaa 23526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 33082884 - 33082767
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||  ||||||||||||| |||    
T  33082884 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 33082785  T
Q  113 tttctccaaaatggacat 130  Q
    |||||||||||| |||||    
T  33082784 tttctccaaaatagacat 33082767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 52037260 - 52037382
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| ||||| ||||||||||||  ||||||||| ||| ||||||||||| ||||| ||||| |||| |||| || | |||    
T  52037260 aaaatagaatgaaataataaatggttaagagtattatagaaa--acacacataattttatcaaaaataataaaatttatttggttttttggataatgcaa 52037357  T
Q  113 tttctccaaaatggacatatatttt 137  Q
    |||||| ||||||||||| ||||||    
T  52037358 tttctctaaaatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 1749446 - 1749357
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    |||||| ||| |||||||||||| |||| | |||||||||||||||||| ||| ||||||||||||||||||||| |||||  |||||||    
T  1749446 aaaatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttg 1749357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 7765154 - 7765071
Alignment:
Q  11 agaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattta 94  Q
    |||||| ||||| |||||||||||| ||| ||||||||  ||||||||||| ||| ||||| ||||||||||||||| ||||||    
T  7765154 agaaaaaaaaattaaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattta 7765071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 1837978 - 1838045
Alignment:
Q  24 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    ||||||||||||  |||||||||||||||||| |||||  || ||||||||||||||||||||| |||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttattt 1838045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 31003926 - 31003992
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataa 81  Q
    |||| ||| |||||||||||| ||||||||||||||||||| | ||||||| |||||| ||||||||    
T  31003926 aatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaataa 31003992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 3943113 - 3943060
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 9588723 - 9588670
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31061594 - 31061662
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 84  Q
    |||| |||||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061594 aatataatgaaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 41959131 - 41959078
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagta 41959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 51064893 - 51065039
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtatt---atagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtaca 111  Q
    |||| |||||||||||||| || ||||||||||   |||||||| ||||| | | ||||||||||||| |||| || |||||  || ||||||  ||  |    
T  51064893 aatataatgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgta 51064992  T
Q  112 atttctccaaaatggacatatattttgaaacggagagagtactatat 158  Q
    ||||||  ||||||||||  |||| |||||||||| ||||| |||||    
T  51064993 atttctttaaaatggacaagtattgtgaaacggagggagtaatatat 51065039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 18396832 - 18396753
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattta 94  Q
    |||| ||||||||||| |||| ||||   ||||||||||||  |||||||| |||||| |||||||||||||| ||||||    
T  18396832 aatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttattta 18396753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  30 taaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||||| |||||| |||||||||||| ||| ||| | |||||| |||||||||||||| |||||  |||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 13984991 - 13985037
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 13985037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 52478103 - 52478016
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||| |||||||| ||||||  |||||| |||||||||||| ||||| |   ||||||||||||||||||||| |||||  |||||||||    
T  52478103 aatagaatgaaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  27 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatt 92  Q
    ||||||||| |||| |||||||||||||||||| | ||| ||| ||||||||||||||||| ||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 44227889 - 44227848
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 3943763 - 3943807
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagtacta 155  Q
    |||||||| ||||||||||| ||||||||||||||| ||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagtacta 3943807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 27143151 - 27143239
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    |||| ||||||||||||||||||||||  |||||||||||| | | |||  | |||| |||||||||||||||| |||||  |||||||    
T  27143151 aatagaatgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 40261419 - 40261501
Alignment:
Q  23 gaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    ||||||||||||| |||| | |||||||||||| | |||||  | ||||||||||| ||||||||| |||||  |||||||||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggt 40261501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 40564244 - 40564293
Alignment:
Q  89 tatttagtttcttggttagtacaatttctccaaaatggacatatattttg 138  Q
    ||||| |||||||||||| | | |||| ||||||||||||||||||||||    
T  40564244 tatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 41959809 - 41959850
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagta 41959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 44228239 - 44228275
Alignment:
Q  110 caatttctccaaaatggacatatattttgaaacggag 146  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  44228239 caatttctccaaaatggacatgtattttgaaatggag 44228275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 9e-61; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 11174361 - 11174503
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  11174361 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 11174460  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtacta 155  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||    
T  11174461 tttctccaaaatgaacatgtattttgaaacggagggagtacta 11174503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 40058441 - 40058620
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  40058441 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 40058540  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtactatatttatttccttaaccagtgcctcgagatcatttatta 194  Q
    ||||||| |||||||||| ||||||||||||||| |||||   | ||||||| |||||||| |||| ||||| |||| ||||    
T  40058541 tttctccgaaatggacatgtattttgaaacggagggagta--ttttttattttcttaaccattgccccgagagcattgatta 40058620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 2540069 - 2540202
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  2540069 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 2540168  T
Q  113 tttctccaaaatggacatatattttgaaacggag 146  Q
    |||||||||||||||||| |||||||||||||||    
T  2540169 tttctccaaaatggacatgtattttgaaacggag 2540202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 3585586 - 3585451
Alignment:
Q  17 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  3585586 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 3585487  T
Q  117 tccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||| ||||||||||||||| |||||    
T  3585486 tccaaaatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 43275537 - 43275674
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  43275537 aaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 43275634  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  43275635 tttctccaaaatggacatgtattttgaaacggagggagta 43275674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 11646467 - 11646602
Alignment:
Q  17 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  11646467 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 11646566  T
Q  117 tccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||| |||||||||||| || |||||    
T  11646567 tccaaaatggacatgtattttgaaacgaagggagta 11646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 37345710 - 37345571
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||    
T  37345710 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttggtgcaa 37345611  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||| |||||||||||| ||||||||||||||| |||||    
T  37345610 tttcttcaaaatggacatgtattttgaaacggagggagta 37345571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 7147052 - 7146911
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||    
T  7147052 aaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaa 7146953  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtact 154  Q
    ||||| |||||||||||| ||||||||||||||  |||||||    
T  7146952 tttcttcaaaatggacatgtattttgaaacggaaggagtact 7146911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 30999661 - 30999791
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  30999661 aaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 30999758  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||| ||||| ||||||||||||||    
T  30999759 tttctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 40918869 - 40919006
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||| ||||| |||||||||||||| |||    
T  40918869 aaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggttagtgcaa 40918966  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  40918967 tttctccaaaatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 36068215 - 36068080
Alignment:
Q  17 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttc 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||| ||||||||||||||| |    
T  36068215 taaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggttagtacaattcc 36068116  T
Q  117 tccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||| ||||||||||||||| |||||    
T  36068115 tccaaaatggacatgtattttgaaacggagggagta 36068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 27035135 - 27034997
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| ||||  ||||| |||||||||||| | |||    
T  27035135 aaaatagaatgaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaa 27035037  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  27035036 tttctccaaaatggacatgtattttgaaacggagggagta 27034997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 20546427 - 20546564
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||  |||||||||| ||| ||||||||||  || ||||||||||||||||||||| |||||| ||||||| ||  | |||    
T  20546427 aaaatataatgaaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattgttgcaa 20546524  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||| ||||||||||||||||||||||| |||| |||||    
T  20546525 tttcttcaaaatggacatatattttgaaatggagggagta 20546564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 13881094 - 13881173
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||| |||||||||||||||||||||||||||||||| |||| || |||| | ||||||||||||||||||||| |||||    
T  13881094 aatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttattt 13881173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 37510405 - 37510314
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||||||||||||||| |||||||||||||||||||| ||||| | | | | | ||| || |||||||||||||| ||||||||||||||||    
T  37510405 aaaataaaatgaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 35866751 - 35866621
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatt 114  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||| | | |||||| ||||||||||| || ||| || |||||||||   || ||||    
T  35866751 aatagaataaaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatt 35866652  T
Q  115 tctccaaaatggacatatattttgaaacgga 145  Q
    |||  ||||||||||  |||| |||||||||    
T  35866651 tctttaaaatggacaagtattgtgaaacgga 35866621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 28562554 - 28562427
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctc 118  Q
    |||||||| |||||||| |||||||||||||||||| | |||| | | ||||||||||||| |||| || |||||  || ||||||  ||  |||||||     
T  28562554 aatgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctt 28562455  T
Q  119 caaaatggacatatattttgaaacggag 146  Q
    |||||||||||  |||||||||||||||    
T  28562454 caaaatggacaagtattttgaaacggag 28562427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 28326797 - 28326883
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||| |||||||||||||||  ||||| ||||||| |||||   ||||||| ||||||||||||||||||||| |||||  |||||||||    
T  28326797 aatagaatgaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 8697898 - 8697951
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 41307961 - 41308014
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 45278701 - 45278754
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 45278754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 10646645 - 10646598
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggag 146  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggag 10646598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 40486453 - 40486506
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | |||||||| |||||||||||| ||||||||||||||| |||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagta 40486506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 41305803 - 41305762
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagta 41305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 10181002 - 10181075
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattta 94  Q
    |||||||||||||||| |||| ||||||||| |||| ||| || || ||| || |||||||||||||| ||||||    
T  10181002 aatgaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttattta 10181075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 39938309 - 39938168
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  39938309 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 39938210  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtact 154  Q
    |||||||||||||| ||| ||||||||||||||| |||||||    
T  39938209 tttctccaaaatggtcatgtattttgaaacggagggagtact 39938168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 3519047 - 3518908
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  3519047 aaaataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 3518948  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  3518947 tttctccaaaatggacatgtattttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 23366928 - 23366790
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||    
T  23366928 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaa 23366829  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagt 151  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  23366828 tttctccaaaatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 1102642 - 1102501
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||    
T  1102642 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaa 1102543  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtact 154  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  1102542 tttctccaaaatggacatgtattttgaaacggagggagtact 1102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 25 - 153
Target Start/End: Original strand, 37673887 - 37674015
Alignment:
Q  25 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctccaaaat 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  125 ggacatatattttgaaacggagagagtac 153  Q
    | |||| ||||||||||||||| ||||||    
T  37673987 gaacatgtattttgaaacggagggagtac 37674015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 12969877 - 12970016
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||    
T  12969877 aaaatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 12969976  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  12969977 tttctccaaaatggacatgtattttgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 1646426 - 1646317
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||  | |||    
T  1646426 aaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttgctgcaa 1646329  T
Q  113 tttctccaaaat 124  Q
    ||||||||||||    
T  1646328 tttctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 22388273 - 22388335
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388273 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 14779914 - 14779832
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttc 99  Q
    |||| ||||||||||||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||| ||||| |||||| ||||    
T  14779914 aatataatgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttatttaatttc 14779832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 35179097 - 35179164
Alignment:
Q  37 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||||| |||||||||||| ||||||| | ||||||||||||||||||||| |||||  |||||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 18078193 - 18078115
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||| |||||| ||||||||| | ||| |||||||||||||  |||| | |  |||||||||||||||||||| |||||    
T  18078193 aatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttattt 18078115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 19976468 - 19976380
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||| ||| |||||||||||   |||||||||||||||||| | ||||||| ||| ||||||| || |||||| |||||  |||||||||    
T  19976468 aatataataaaataataaataggtaagggtattatagaaaa-aaacacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 39562037 - 39562103
Alignment:
Q  25 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    ||||||||||| ||||||||||  ||||||| ||| | ||| |||| |||||||||||||||| |||||    
T  39562037 aataataaatggttaagggtat--tagaaaaaacaaaaataatttcttcaaaaataacaaaatttattt 39562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 44365185 - 44365153
Alignment:
Q  124 tggacatatattttgaaacggagagagtactat 156  Q
    ||||||| |||||||||||||||||||||||||    
T  44365185 tggacatgtattttgaaacggagagagtactat 44365153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 25773788 - 25773648
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |||    
T  25773788 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaa 25773689  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtac 153  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  25773688 tttctccaaaatggacatgtattttgaaacggagggagtac 25773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 10285195 - 10285334
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||    
T  10285195 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggttaatgcaa 10285294  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||| ||||| ||||||||||||||| |||||    
T  10285295 tttctccaaaatagacatctattttgaaacggagggagta 10285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 12806991 - 12807130
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||    
T  12806991 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaa 12807090  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  12807091 tttctccaaaatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 30720630 - 30720769
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  30720630 aaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 30720729  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  30720730 tttctccaaaatggacatgtattttgaaacggagggagta 30720769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 40886748 - 40886880
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||   ||||||||||||| |||    
T  40886748 aaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggttagtgcaa 40886847  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    ||||||||||||| |||| ||||||||||||||    
T  40886848 tttctccaaaatgaacatgtattttgaaacgga 40886880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 36561237 - 36561369
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| | |||    
T  36561237 aaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattactgcaa 36561336  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    ||| || ||||||||||| ||||||||||||||    
T  36561337 tttttctaaaatggacatgtattttgaaacgga 36561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 37900762 - 37900901
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||||| | |||    
T  37900762 aaaatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaa 37900861  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||  | ||||||||||||||| |||||    
T  37900862 tttctccaaaatggatgtgtattttgaaacggagggagta 37900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 7277560 - 7277688
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||| ||||||| | |||    
T  7277560 aaaatataatgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaa 7277659  T
Q  113 tttctccaaaatggacatatattttgaaa 141  Q
    |||||||||||| ||||| ||||||||||    
T  7277660 tttctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 25683366 - 25683459
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggtta 106  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||    
T  25683366 aaaatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggtta 25683459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  27 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||||||||||||||||||||| ||||||||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 30403101 - 30403191
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    ||||||||||||||| ||||||||||| ||||||||| |||| | ||||| | ||||||||||||||||||||| ||||| ||||||||||    
T  30403101 aataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 16983393 - 16983258
Alignment:
Q  18 aaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatc--tatttagtttcttggttagtacaattt 115  Q
    ||||| ||||||||| || ||||||||||| ||||||| ||||| ||  |||||||||||| || ||||    ||||| |||||||||||| | ||||||    
T  16983393 aaaataaaataataa-tggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaattt 16983295  T
Q  116 ctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||||||||||||| ||||||||||| ||| |||||    
T  16983294 ctccaaaatggacatgtattttgaaacagagggagta 16983258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 734478 - 734608
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatt 114  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||| ||| ||||||| |||||  ||  |||||  |   ||||    
T  734478 aatagaatgaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatt 734576  T
Q  115 tctccaaaatggacatatattttgaaacggag 146  Q
    ||| |||||||||||  |||| ||||||||||    
T  734577 tcttcaaaatggacaagtattgtgaaacggag 734608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 11319696 - 11319565
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatt 114  Q
    |||| ||||||||||||||||| |||||||||||||||||| | ||| | | |||||| |||||| |||| || |||||  ||  || ||  ||  ||||    
T  11319696 aatagaatgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatt 11319597  T
Q  115 tctccaaaatggacatatattttgaaacggag 146  Q
    ||| ||||||||||| ||||| ||||||||||    
T  11319596 tcttcaaaatggacaaatattgtgaaacggag 11319565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 155
Target Start/End: Original strand, 15305223 - 15305268
Alignment:
Q  110 caatttctccaaaatggacatatattttgaaacggagagagtacta 155  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  15305223 caatttctccaaaatggacatgtattttgaaacggagggagtacta 15305268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 39071020 - 39070942
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacac-acatattttcatcaaaaataacaaaatctattt 93  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||| ||| | ||||||||||||| |||| || |||||    
T  39071020 aatagaatgaaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttattt 39070942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 1056422 - 1056507
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttctt 101  Q
    |||| |||||||||||||||||| ||  ||||||||||||| ||||| | | |||||| |||||||||||||| |||| | ||||||    
T  1056422 aatataatgaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttattcaatttctt 1056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 11796559 - 11796499
Alignment:
Q  44 tattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggt 104  Q
    |||||||||| | ||||| | | |||||||||||||||||||||  ||||| |||||||||    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggt 11796499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 6e-59; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 13364982 - 13364843
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  13364982 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 13364883  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||||||||||| |||| ||||||||||||||| |||||    
T  13364882 tttctccaaaatgaacatgtattttgaaacggagggagta 13364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 3383215 - 3383083
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||    
T  3383215 aaaataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaa 3383116  T
Q  113 tttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||||||||||||||||||    
T  3383115 tttctccaaaatggacatatattttgaaacgga 3383083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 46694248 - 46694392
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||    
T  46694248 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaa 46694347  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagtactata 157  Q
    ||||||||||| |||||| ||||||||||||||| ||||| ||||    
T  46694348 tttctccaaaaaggacatgtattttgaaacggagggagtaatata 46694392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 198994 - 198855
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| ||| |||    
T  198994 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtcagtgcaa 198895  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  198894 tttctccaaaatggacatgtattttgaaacggagggagta 198855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 152
Target Start/End: Original strand, 23088069 - 23088208
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  23088069 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 23088168  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||| |||||| ||||||||||||||||| ||| |||||    
T  23088169 tttcttcaaaatagacatatattttgaaacagagggagta 23088208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 19241810 - 19241945
Alignment:
Q  17 taaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  19241810 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 19241909  T
Q  117 tccaaaatggacatatattttgaaacggagagagta 152  Q
     ||||||||||||| ||||||||||||||| |||||    
T  19241910 accaaaatggacatgtattttgaaacggagggagta 19241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 36881419 - 36881282
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  36881419 aaaataaaatgaaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaa 36881322  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  36881321 tttctccaaaatggacatgtattttgaaacggagggagta 36881282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 29375277 - 29375138
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| | |||    
T  29375277 aaaaaaaaaagaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaa 29375178  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  29375177 tttctccaaaatggacatgtattttgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 43750276 - 43750137
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||| | |||    
T  43750276 aaaatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaa 43750177  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||||||| |||||||||||| || |||||    
T  43750176 tttctccaaaatggacatgtattttgaaacgaagggagta 43750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  48 atagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctccaaaatggacatatattttgaaacgga 145  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 13702890 - 13702784
Alignment:
Q  31 aaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaatttctccaaaatggacat 130  Q
    ||||| |||| |||||||||||||||| ||| ||| |||||||||||||| |||||| ||||| |||||||||||| | ||||||||||||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  131 atatttt 137  Q
     ||||||    
T  13702790 gtatttt 13702784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  74 aaaaataacaaaatctatttagtttcttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||| ||||| ||||||||| |||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 37781069 - 37780988
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttctt 101  Q
    |||||||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||||| ||||| |||||| ||||||    
T  37781069 aatgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttatttaatttctt 37780988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 19897067 - 19897145
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||| |||||||||||||| || |||||||||||||||||| ||||| | | |||||| |||||||||||||| |||||    
T  19897067 aatagaatgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttattt 19897145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 12094635 - 12094582
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| |||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 27707126 - 27707177
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacat 64  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||||| ||||    
T  27707126 aaaataaaaagaaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 19911562 - 19911509
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | |||||||||||||||| |||| ||||||||||||||| |||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagta 19911509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 44276816 - 44276775
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagta 44276775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 44277455 - 44277508
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||||||||| ||||| ||||||||||||||| |||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 44277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 18356007 - 18356095
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttgg 103  Q
    |||| |||||||| |||||||| |||||||||||||||||| ||||| | | ||||| ||||| | |||| || |||||| || |||||    
T  18356007 aatagaatgaaatgataaatgagtaagggtattatagaaaaaacacaaagaatttcaccaaaactgacaacatgtatttaattccttgg 18356095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 17755284 - 17755221
Alignment:
Q  23 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 86  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  17755284 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 17755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 19056604 - 19056541
Alignment:
Q  23 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 86  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  19056604 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 19056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 1455297 - 1455366
Alignment:
Q  24 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctattt 93  Q
    |||||||||||| | ||| | ||||||||| | ||||| ||| ||| ||||||||||||||||| |||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttattt 1455366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 6901696 - 6901655
Alignment:
Q  20 aatgaaataataaatgattaagggtattatagaaaacacaca 61  Q
    ||||||||||||||||| ||||||||||| |||||| |||||    
T  6901696 aatgaaataataaatgagtaagggtattagagaaaaaacaca 6901655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 19912174 - 19912215
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| | ||||||||| ||||||||||| |||||| |||||||| |||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 38806341 - 38806382
Alignment:
Q  111 aatttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 42791301 - 42791253
Alignment:
Q  133 attttgaaacggagagagtactatatttatttccttaaccagtgcctcg 181  Q
    |||||||||||||| |||||||| |||| |||||||||| |||| ||||    
T  42791301 attttgaaacggagggagtactaaatttgtttccttaacaagtgtctcg 42791253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 45593 - 45454
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||| || |||    
T  45593 aaaatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaa 45494  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    ||||||||||||| |||| ||||||||||||||| |||||    
T  45493 tttctccaaaatgaacatgtattttgaaacggagggagta 45454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 301 - 170
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||        ||||||| | |||    
T  301 aaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttat--------ttggttactgcaa 210  T
Q  113 tttctccaaaatggacatatattttgaaacggagagagta 152  Q
    |||||||||| |||| || ||||||||||||||| |||||    
T  209 tttctccaaagtggatatgtattttgaaacggagggagta 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 403 - 525
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttggttagtacaa 112  Q
    |||||| ||||||||||||||||||||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||||  ||| ||| ||| | |||    
T  403 aaaatagaatgaaataataaatgattaagggtattat--aaaaaacacacataattttatcaaaaataacaaaatttatttgattttttgattactgcaa 500  T
Q  113 tttctccaaaatggacatatatttt 137  Q
    |||| |||||||| |||| ||||||    
T  501 tttcgccaaaatgaacatgtatttt 525  T

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Target: scaffold0056 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 70961 - 70874
Alignment:
Q  15 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatctatttagtttcttg 102  Q
    |||| |||||||||||||||| |||||||| ||| |||||| ||||||| | ||||||||||||||||||||| |||||  |||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

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Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 65301 - 65375
Alignment:
Q  13 aaaataaaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaa 86  Q
    |||||| |||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  65301 aaaatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

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Target: scaffold0257 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 23520 - 23466
Alignment:
Q  99 cttggttagtacaatttctccaaaatggacatatattttgaaacggagagagtac 153  Q
    |||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtac 23466  T

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