View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20373_low_11 (Length: 261)
Name: NF20373_low_11
Description: NF20373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20373_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 34811049 - 34810819
Alignment:
| Q |
17 |
aaactctcaatcaaatgatctctaaaaaatgaggcaattcatttaactatcaatttatataaaatgatcagattatatcagtgtatcaattgagcaatat |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34811049 |
aaactctcaatcaaatgatctctaaaaaatgaggcaattcatttaactattaatttatataaaatgatcagattatatcagtgtatcaattgagcaatat |
34810950 |
T |
|
| Q |
117 |
tataccaatcaaagtattatgacgaatattgattttgtaaaatatgtacaaaatcagtgtcataatactatgtctaagttgacaacgttacttgtgatcc |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
34810949 |
tataccaatcaaagtattatgacgaatattgattttgtaaaatatgtacaaaatcagtgtcataatactatgtctaagttgacaacgttacttatgatcc |
34810850 |
T |
|
| Q |
217 |
caacccttgtagaatattacttttttatttga |
248 |
Q |
| |
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||| |||||||||||| ||||||||||||||| |
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| T |
34810849 |
caa-ccttgtagaatactacttttttatttga |
34810819 |
T |
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