View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20373_low_6 (Length: 314)
Name: NF20373_low_6
Description: NF20373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20373_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 3730262 - 3730560
Alignment:
| Q |
1 |
gccaatcaattttttgtaatgctaacctacatgacaagcttgttctagcccttgttgtttcctcaagtgccaaactcatacttagatcatctttgttttg |
100 |
Q |
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| T |
3730262 |
gccaatcaattttttgtaatgctaacctacatgacaagcttgttctagcccttgttgtttcctcaagtgccaaactcatacttagatcatctttgttttg |
3730361 |
T |
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| Q |
101 |
catttcaacctgcatttaactatgtttaagcaacgatccctacataataaggacataggtacaaatacaacaatgataatggtttgttaccgttttggac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3730362 |
catttcaacctgcatttaactatgtttaagcaacgatccctacataataaggacataggtacaaatacaacaatgataatggtttgttaccgttttggac |
3730461 |
T |
|
| Q |
201 |
atcaatgatccttctgaaatcacattgttgtgttcgcacgcaccatccatctcttccgttgtctgcatgaataattttacatccttgtcggttatttct |
299 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
3730462 |
atcaatgatccttctgaaaccacattgttgtgttcgcacgcaccatccatctcttccgttgtctgcatgaataattttacatacttgtcggttatttct |
3730560 |
T |
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