View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20374_high_2 (Length: 482)

Name: NF20374_high_2
Description: NF20374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20374_high_2
NF20374_high_2
[»] scaffold0063 (3 HSPs)
scaffold0063 (260-461)||(34468-34671)
scaffold0063 (11-221)||(34710-34920)
scaffold0063 (29-137)||(35172-35280)
[»] scaffold0351 (1 HSPs)
scaffold0351 (152-465)||(11042-11362)
[»] scaffold1364 (1 HSPs)
scaffold1364 (260-465)||(64-269)
[»] scaffold0263 (1 HSPs)
scaffold0263 (298-465)||(21061-21228)
[»] chr8 (34 HSPs)
chr8 (260-436)||(6278187-6278365)
chr8 (298-446)||(6293277-6293425)
chr8 (16-137)||(26997836-26997957)
chr8 (28-137)||(10047481-10047589)
chr8 (30-147)||(13315194-13315311)
chr8 (16-137)||(9800041-9800162)
chr8 (16-137)||(16662170-16662291)
chr8 (28-137)||(17914199-17914308)
chr8 (28-137)||(6298014-6298123)
chr8 (28-102)||(6297841-6297915)
chr8 (28-137)||(6297464-6297573)
chr8 (32-136)||(26243378-26243482)
chr8 (27-102)||(10047856-10047931)
chr8 (16-102)||(12489265-12489351)
chr8 (31-136)||(16662454-16662558)
chr8 (32-102)||(21006105-21006175)
chr8 (28-143)||(44148573-44148688)
chr8 (28-103)||(44024261-44024336)
chr8 (16-102)||(9800310-9800396)
chr8 (16-137)||(17915474-17915594)
chr8 (39-137)||(12489517-12489614)
chr8 (16-80)||(21005781-21005845)
chr8 (31-133)||(7344838-7344940)
chr8 (19-102)||(26720358-26720441)
chr8 (28-78)||(39234897-39234947)
chr8 (61-137)||(4694444-4694520)
chr8 (61-137)||(4624535-4624611)
chr8 (28-95)||(44803542-44803609)
chr8 (40-102)||(20682745-20682807)
chr8 (40-97)||(29917146-29917203)
chr8 (37-102)||(36155308-36155373)
chr8 (61-137)||(21005961-21006037)
chr8 (49-97)||(22601540-22601588)
chr8 (61-137)||(44024400-44024476)
[»] chr4 (50 HSPs)
chr4 (16-137)||(29691527-29691648)
chr4 (16-137)||(51906786-51906907)
chr4 (31-137)||(48760097-48760203)
chr4 (28-137)||(3296545-3296654)
chr4 (28-137)||(7118143-7118252)
chr4 (28-137)||(51906422-51906531)
chr4 (28-137)||(3296923-3297032)
chr4 (28-137)||(30608612-30608721)
chr4 (16-137)||(35166833-35166954)
chr4 (28-137)||(48553898-48554007)
chr4 (16-102)||(30608282-30608368)
chr4 (28-137)||(34129279-34129388)
chr4 (36-137)||(38759706-38759807)
chr4 (16-127)||(25917003-25917116)
chr4 (38-131)||(26984152-26984245)
chr4 (16-78)||(1791515-1791577)
chr4 (16-78)||(26168053-26168115)
chr4 (27-137)||(34128996-34129106)
chr4 (28-137)||(1791150-1791259)
chr4 (28-137)||(41510070-41510179)
chr4 (28-103)||(5544820-5544895)
chr4 (28-99)||(30952980-30953051)
chr4 (28-135)||(56106440-56106547)
chr4 (16-102)||(30047983-30048069)
chr4 (16-102)||(30062324-30062410)
chr4 (11-137)||(48759814-48759938)
chr4 (17-102)||(52398717-52398802)
chr4 (28-137)||(26168371-26168482)
chr4 (53-137)||(34294454-34294536)
chr4 (28-138)||(29691891-29692001)
chr4 (40-137)||(40841464-40841560)
chr4 (61-137)||(2669009-2669084)
chr4 (61-137)||(38026119-38026194)
chr4 (40-147)||(54143492-54143599)
chr4 (40-102)||(54142362-54142424)
chr4 (40-137)||(2669429-2669525)
chr4 (61-137)||(28957754-28957829)
chr4 (61-137)||(40841905-40841980)
chr4 (27-58)||(5545161-5545192)
chr4 (31-101)||(35469045-35469115)
chr4 (40-95)||(46262678-46262733)
chr4 (61-103)||(55347981-55348023)
chr4 (40-97)||(12922683-12922740)
chr4 (61-102)||(17288385-17288426)
chr4 (61-137)||(10580042-10580118)
chr4 (61-97)||(12108301-12108337)
chr4 (89-137)||(19310789-19310837)
chr4 (61-137)||(28957313-28957388)
chr4 (61-137)||(31227881-31227956)
chr4 (61-137)||(54168835-54168911)
[»] chr2 (32 HSPs)
chr2 (16-147)||(21182299-21182430)
chr2 (27-137)||(2517415-2517525)
chr2 (11-137)||(3691351-3691477)
chr2 (28-137)||(2191219-2191328)
chr2 (28-137)||(21216925-21217034)
chr2 (28-137)||(21217300-21217409)
chr2 (28-137)||(21264993-21265102)
chr2 (28-137)||(21265368-21265477)
chr2 (16-136)||(7083525-7083645)
chr2 (28-128)||(3691094-3691194)
chr2 (16-137)||(32114168-32114288)
chr2 (27-129)||(39729584-39729686)
chr2 (28-137)||(21267347-21267456)
chr2 (28-137)||(24093158-24093267)
chr2 (28-137)||(32114450-32114559)
chr2 (28-103)||(24093535-24093610)
chr2 (30-137)||(32860816-32860923)
chr2 (28-88)||(2606635-2606695)
chr2 (16-102)||(10706618-10706702)
chr2 (60-102)||(3624924-3624966)
chr2 (61-137)||(1804234-1804309)
chr2 (61-137)||(1804675-1804750)
chr2 (61-137)||(6476089-6476164)
chr2 (61-137)||(6476530-6476605)
chr2 (61-137)||(10709477-10709553)
chr2 (61-137)||(11451199-11451274)
chr2 (61-137)||(27377651-27377726)
chr2 (40-137)||(2035610-2035707)
chr2 (60-133)||(10710841-10710914)
chr2 (60-137)||(39600774-39600851)
chr2 (61-137)||(2036615-2036691)
chr2 (63-147)||(2191382-2191466)
[»] chr5 (39 HSPs)
chr5 (27-137)||(87239-87349)
chr5 (16-137)||(31588313-31588435)
chr5 (28-137)||(8750339-8750448)
chr5 (28-137)||(31176509-31176618)
chr5 (16-138)||(13987283-13987406)
chr5 (28-147)||(3406839-3406957)
chr5 (28-137)||(16284276-16284385)
chr5 (27-137)||(8648043-8648153)
chr5 (28-137)||(18999368-18999477)
chr5 (31-137)||(18999622-18999728)
chr5 (16-137)||(30415451-30415571)
chr5 (25-137)||(8750012-8750124)
chr5 (16-102)||(3935661-3935747)
chr5 (33-137)||(1650007-1650110)
chr5 (28-137)||(15978391-15978499)
chr5 (51-137)||(87021-87107)
chr5 (28-102)||(18339110-18339184)
chr5 (16-94)||(38834746-38834823)
chr5 (48-137)||(20892544-20892632)
chr5 (61-137)||(22231172-22231248)
chr5 (11-87)||(35383292-35383368)
chr5 (38-137)||(18340639-18340738)
chr5 (25-78)||(3935451-3935504)
chr5 (31-137)||(3406461-3406567)
chr5 (40-137)||(19352301-19352398)
chr5 (28-73)||(29751724-29751768)
chr5 (28-73)||(29752390-29752434)
chr5 (60-137)||(37813377-37813454)
chr5 (61-137)||(119186-119262)
chr5 (61-133)||(119796-119868)
chr5 (61-137)||(5747204-5747279)
chr5 (61-137)||(6543417-6543492)
chr5 (61-137)||(21949402-21949477)
chr5 (61-137)||(21949843-21949918)
chr5 (61-137)||(31162423-31162498)
chr5 (61-137)||(19353081-19353157)
chr5 (61-137)||(28641163-28641238)
chr5 (61-97)||(28641604-28641640)
chr5 (61-97)||(39402253-39402289)
[»] chr1 (34 HSPs)
chr1 (11-137)||(5683523-5683649)
chr1 (16-147)||(50359117-50359247)
chr1 (16-137)||(31436350-31436471)
chr1 (18-137)||(5683163-5683282)
chr1 (28-137)||(5172747-5172856)
chr1 (28-137)||(9880486-9880595)
chr1 (16-137)||(9880757-9880878)
chr1 (16-137)||(19895402-19895523)
chr1 (27-138)||(19895778-19895889)
chr1 (28-137)||(18180257-18180366)
chr1 (25-137)||(50359415-50359527)
chr1 (11-137)||(18179881-18180007)
chr1 (28-137)||(3591316-3591425)
chr1 (28-137)||(48155258-48155367)
chr1 (25-137)||(48154976-48155087)
chr1 (28-147)||(6751039-6751158)
chr1 (31-130)||(47541527-47541626)
chr1 (31-137)||(4288422-4288523)
chr1 (16-137)||(6751320-6751442)
chr1 (25-137)||(45664689-45664801)
chr1 (61-137)||(1500993-1501069)
chr1 (28-76)||(47541803-47541851)
chr1 (61-137)||(36793586-36793662)
chr1 (31-138)||(19976165-19976272)
chr1 (40-146)||(47410845-47410950)
chr1 (29-78)||(42723235-42723284)
chr1 (61-137)||(12869666-12869742)
chr1 (61-137)||(32266485-32266560)
chr1 (66-137)||(37927522-37927593)
chr1 (61-137)||(40124078-40124153)
chr1 (61-137)||(47410425-47410500)
chr1 (61-98)||(1500100-1500137)
chr1 (61-97)||(8997382-8997418)
chr1 (61-137)||(32266926-32267001)
[»] chr3 (38 HSPs)
chr3 (25-137)||(51471337-51471449)
chr3 (28-131)||(44504100-44504203)
chr3 (11-137)||(22814298-22814424)
chr3 (28-136)||(37172084-37172192)
chr3 (28-102)||(9217857-9217931)
chr3 (31-137)||(44504368-44504474)
chr3 (28-137)||(13637759-13637868)
chr3 (28-137)||(43933442-43933551)
chr3 (16-137)||(9218481-9218601)
chr3 (29-137)||(43933708-43933815)
chr3 (38-102)||(51755903-51755967)
chr3 (31-134)||(25770326-25770429)
chr3 (27-137)||(25770694-25770804)
chr3 (16-102)||(50732262-50732348)
chr3 (16-102)||(50780507-50780593)
chr3 (16-138)||(38485698-38485819)
chr3 (27-100)||(27013448-27013521)
chr3 (16-137)||(34743437-34743558)
chr3 (28-113)||(37172455-37172540)
chr3 (27-137)||(13637478-13637587)
chr3 (40-137)||(45539631-45539727)
chr3 (65-137)||(22814597-22814669)
chr3 (28-137)||(26741283-26741388)
chr3 (31-102)||(54588494-54588565)
chr3 (52-102)||(132062-132112)
chr3 (67-137)||(45728335-45728405)
chr3 (40-137)||(36899256-36899352)
chr3 (61-137)||(47342748-47342824)
chr3 (61-137)||(36899697-36899772)
chr3 (61-137)||(45539211-45539286)
chr3 (61-137)||(46689684-46689759)
chr3 (28-137)||(33225490-33225599)
chr3 (40-97)||(42606321-42606378)
chr3 (61-102)||(48868599-48868640)
chr3 (61-137)||(2389075-2389150)
chr3 (61-97)||(4199898-4199934)
chr3 (61-137)||(25770496-25770572)
chr3 (61-137)||(46690125-46690200)
[»] scaffold0009 (3 HSPs)
scaffold0009 (16-138)||(108089-108211)
scaffold0009 (28-102)||(107759-107833)
scaffold0009 (61-137)||(107897-107973)
[»] chr7 (36 HSPs)
chr7 (28-137)||(44803611-44803720)
chr7 (16-131)||(22948845-22948960)
chr7 (28-137)||(17075221-17075330)
chr7 (28-137)||(17075596-17075705)
chr7 (16-137)||(20543913-20544034)
chr7 (28-138)||(20544290-20544399)
chr7 (29-137)||(10466759-10466867)
chr7 (25-137)||(32092505-32092617)
chr7 (30-137)||(18152758-18152865)
chr7 (27-137)||(32092230-32092340)
chr7 (28-137)||(5029733-5029841)
chr7 (16-137)||(28852695-28852816)
chr7 (28-128)||(42750097-42750197)
chr7 (31-137)||(28854679-28854785)
chr7 (27-137)||(11974666-11974776)
chr7 (28-137)||(28838357-28838463)
chr7 (16-78)||(11975030-11975092)
chr7 (28-137)||(23548986-23549095)
chr7 (46-134)||(6621113-6621200)
chr7 (61-137)||(30939576-30939652)
chr7 (27-134)||(49053858-49053966)
chr7 (60-138)||(30938596-30938674)
chr7 (27-76)||(23548670-23548719)
chr7 (61-137)||(27310049-27310125)
chr7 (60-137)||(27311059-27311140)
chr7 (28-131)||(12908389-12908492)
chr7 (74-137)||(23548056-23548119)
chr7 (40-137)||(16755624-16755720)
chr7 (40-137)||(33847868-33847964)
chr7 (61-137)||(18443621-18443696)
chr7 (61-137)||(22954048-22954123)
chr7 (60-103)||(33848308-33848351)
chr7 (28-103)||(49053518-49053592)
chr7 (40-97)||(29783976-29784033)
chr7 (61-137)||(4152722-4152798)
chr7 (61-137)||(11992716-11992792)
[»] chr6 (26 HSPs)
chr6 (16-137)||(17157548-17157669)
chr6 (30-137)||(4510190-4510298)
chr6 (16-101)||(21113067-21113152)
chr6 (11-137)||(7645944-7646070)
chr6 (28-137)||(5974013-5974122)
chr6 (35-137)||(211706-211809)
chr6 (16-146)||(14712973-14713103)
chr6 (16-137)||(25932352-25932476)
chr6 (28-137)||(8710320-8710428)
chr6 (31-137)||(1869453-1869559)
chr6 (50-137)||(211443-211530)
chr6 (28-102)||(20522135-20522209)
chr6 (72-137)||(17157856-17157921)
chr6 (40-137)||(14257149-14257245)
chr6 (28-102)||(25932120-25932190)
chr6 (61-137)||(14257590-14257665)
chr6 (61-137)||(14712832-14712908)
chr6 (29-70)||(5976035-5976076)
chr6 (40-97)||(34984536-34984592)
chr6 (61-137)||(5975834-5975909)
chr6 (29-137)||(14712661-14712767)
chr6 (61-137)||(15147720-15147795)
chr6 (61-137)||(15148161-15148236)
chr6 (61-137)||(19595661-19595737)
chr6 (61-97)||(20824205-20824241)
chr6 (61-137)||(20824607-20824682)
[»] scaffold0933 (1 HSPs)
scaffold0933 (27-137)||(493-603)
[»] scaffold0085 (1 HSPs)
scaffold0085 (40-137)||(39843-39939)
[»] scaffold0177 (1 HSPs)
scaffold0177 (28-137)||(25821-25930)


Alignment Details
Target: scaffold0063 (Bit Score: 169; Significance: 2e-90; HSPs: 3)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 260 - 461
Target Start/End: Complemental strand, 34671 - 34468
Alignment:
Q  260 tgttccaaaacaatgggtttccagtgtggttg--aaccctctaaattattgacattaaactgtcgtaggaccaacaataataaatatattttgattttaa 357  Q
    ||||| |||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  34671 tgttcaaaaacaatgggtttccagtgtggtttctaaccctctaaattattgacaataaactgtcgtaggaccaacaataataaatatattttgtttttaa 34572  T
Q  358 tacattatctttgttcttgaatataaacttgtggatttgttaggataaatggtccatctaaataaacatgtcgattaatacaaaacaatgaagaatgcca 457  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34571 tacattagctttgttcttgaatataaacatgtggatttgttaggataaatggtccatctaaataaacatgtcgattaatacaaaacaatgaagaatgcca 34472  T
Q  458 tgga 461  Q
    ||||    
T  34471 tgga 34468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 34920 - 34710
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| ||||| || ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||| |||| ||| |||||||||||| |    
T  34920 agaaaattaatagcagagactaattttgataacggagataaaatgtgagtactttaaaaacatttaatgaaatgtatggaccattattcaaatagacgca 34821  T
Q  111 aaatataagaactaaaaacatatttaattcaaaaatatcgggtaaatataaaatcacttatgtgtttgctcttactctaaaatggataatgctcttagct 210  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  34820 aaatataaggactaaaaacatatttaataaaaaaatatcgggtaagtataaaatcacttgtatgtttgctcttactctaaaatggataatgctcttagct 34721  T
Q  211 tcccttactct 221  Q
    |||||||||||    
T  34720 tcccttactct 34710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 35172 - 35280
Alignment:
Q  29 actaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaa 128  Q
    ||||||||| ||||| ||||||||||||||  |||||||||||||| ||| | |||||| ||||||||||||||  |||| ||||| |||| ||||||||    
T  35172 actaattttcataaccgagataaaatgtgaggattttaaaaacattcaataaaatgtagagactattcttcaaagggacgcaaaatgtaaggactaaaaa 35271  T
Q  129 catatttaa 137  Q
    |||||||||    
T  35272 catatttaa 35280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 161; Significance: 1e-85; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 152 - 465
Target Start/End: Original strand, 11042 - 11362
Alignment:
Q  152 gtaaatataaaatcacttatgtgtttgctcttactctaaaatggataatgctcttagcttcccttactctcnnnnnnntgtattgtttgttcggataaga 251  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||       |||||||||||    |||||||    
T  11042 gtaagtataaaatcacttatgtgtttgctcttattctaaaatggataatgctcttaacttcccttactctcaaaaaagtgtattgtttg----gataaga 11137  T
Q  252 ctttctcgtgttccaa-----------aacaatgggtttccagtgtggttg--aaccctctaaattattgacattaaactgtcgtaggaccaacaataat 338  Q
    ||||||||||||||||           |||||||| |||||||||| |||   ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  11138 ctttctcgtgttccaagcatgttccaaaacaatggttttccagtgttgtttctaacactctaaattattgacattaaactgtcgtcggaccaacaataat 11237  T
Q  339 aaatatattttgattttaatacattatctttgttcttgaatataaacttgtggatttgttaggataaatggtccatctaaataaacatgtcgattaatac 438  Q
    |||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||  |||| |||| ||||    
T  11238 aaatatattttgtttttaatacattaactttgttgttgaatttaaacttgtggatttgttaggaaaaatggtacatctaaataa--atgtggatttatac 11335  T
Q  439 aaaacaatgaagaatgccatggaatgg 465  Q
    ||||||||||||||| |||||||||||    
T  11336 aaaacaatgaagaatcccatggaatgg 11362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1364 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold1364
Description:

Target: scaffold1364; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 260 - 465
Target Start/End: Original strand, 64 - 269
Alignment:
Q  260 tgttccaaaacaatgggtttccagtgtggttg--aaccctctaaattattgacattaaactgtcgtaggaccaacaataataaatatattttgattttaa 357  Q
    |||||||||||||||| |||||||||| |||   ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  64 tgttccaaaacaatggttttccagtgttgtttctaacactctaaattattgacattaaactgtcgtcggaccaacaataataaatatattttgtttttaa 163  T
Q  358 tacattatctttgttcttgaatataaacttgtggatttgttaggataaatggtccatctaaataaacatgtcgattaatacaaaacaatgaagaatgcca 457  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||  |||| |||| ||||||||||||||||||| |||    
T  164 tacattaactttgttgttgaatttaaacttgtggatttgttaggaaaaatggtacatctaaataa--atgtggatttatacaaaacaatgaagaatccca 261  T
Q  458 tggaatgg 465  Q
    ||||||||    
T  262 tggaatgg 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 298 - 465
Target Start/End: Complemental strand, 21228 - 21061
Alignment:
Q  298 ctaaattattgacattaaactgtcgtaggaccaacaataataaatatattttgattttaatacattatctttgttcttgaatataaacttgtggatttgt 397  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||    
T  21228 ctaaattattgacattaaactgtcgtaggaccaacaataataattatattttgtttttaatacattaactttgttcttgattatatacttgtggatttgt 21129  T
Q  398 taggataaatggtccatctaaataaacatgtcgattaatacaaaacaatgaagaatgccatggaatgg 465  Q
    ||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  21128 taggaaaaatggtacatctaaataaacatgtggattgatacaaaacaatgaagaatgtcatggaatgg 21061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 260 - 436
Target Start/End: Complemental strand, 6278365 - 6278187
Alignment:
Q  260 tgttccaaaacaatgggtttccagtgtggttg--aaccctctaaattattgacattaaactgtcgtaggaccaacaataataaatatattttgattttaa 357  Q
    |||||||||||||||||||||||||||||||   ||| || ||| ||| |||||||||||  |||||| |||||||||||||| ||||||||| ||||||    
T  6278365 tgttccaaaacaatgggtttccagtgtggtttctaacactgtaagttactgacattaaaccttcgtagtaccaacaataataattatattttgtttttaa 6278266  T
Q  358 tacattatctttgttcttgaatataaacttgtggatttgttaggataaatggtccatctaaataaacatgtcgattaat 436  Q
    ||||||| ||||| ||||||||| |||| |||||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  6278265 tacattaactttgatcttgaatacaaacatgtggatttgttaggaaaaatggcacatctaaataaacatgtggattaat 6278187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 298 - 446
Target Start/End: Complemental strand, 6293425 - 6293277
Alignment:
Q  298 ctaaattattgacattaaactgtcgtaggaccaacaataataaatatattttgattttaatacattatctttgttcttgaatataaacttgtggatttgt 397  Q
    |||| ||||||||||||||| || ||||||||| |||||||  |||| ||||| ||||||||||||| ||||| |||||||||||||| | |||||||||    
T  6293425 ctaagttattgacattaaaccgtggtaggaccagcaataattgatattttttgtttttaatacattagctttgatcttgaatataaacatttggatttgt 6293326  T
Q  398 taggataaatggtccatctaaataaacatgtcgattaatacaaaacaat 446  Q
    ||||| ||||| | ||||||||||||||||| ||| |||||||||||||    
T  6293325 taggaaaaatgatacatctaaataaacatgtggatcaatacaaaacaat 6293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 26997836 - 26997957
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| || |||||||||||||||||||||||||||||||  |||||||||| | ||||||| ||||| |||||||||||||||| |||| |||||     
T  26997836 attaacagcagggactaattttgataacggagataaaatgtgaggattttaaaaataattaatgaaatgtatggactattcttcaaatggacgcaaaatg 26997935  T
Q  116 taagaactaaaaacatatttaa 137  Q
    ||||||||||||||||||||||    
T  26997936 taagaactaaaaacatatttaa 26997957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 10047589 - 10047481
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  | || ||||| |||| | |||||    
T  10047589 gactaattttgataacggagataaaatgtgagaattttaaaaacatttaatga-atgtagggactattcttcaaaagggcgcaaaatgtaaggattaaaa 10047491  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  10047490 acatatttaa 10047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 13315311 - 13315194
Alignment:
Q  30 ctaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaac 129  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||||||| |||| | || ||||| |||| |||||||||    
T  13315311 ctaattttgataacagagataaaatgtgatgattttaaaaacatttaatgaaatgtagggactattctttaaatgggcgcaaaatgtaaggactaaaaac 13315212  T
Q  130 atatttaattcaaaaata 147  Q
    ||||||||  ||||||||    
T  13315211 atatttaacccaaaaata 13315194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 9800162 - 9800041
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| | ||||||||||||||||||||||| ||||||||  |||||||||||||||||| | ||||| ||| ||||||||||| || || |||||     
T  9800162 attaacagcaaagactaattttgataacggagatgaaatgtgaggattttaaaaacatttaataaaatgtaaggattattcttcaaagaggcgcaaaatc 9800063  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||||||||||||||||    
T  9800062 taaggactaaaaacatatttaa 9800041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 16662291 - 16662170
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| || |||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    || |||||     
T  16662291 attaacagtagggactaattttaataacagagataaaatgtgagaattttaaaaacatttaatgaaatgtagggactattcttcaaaggagcgcaaaatg 16662192  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||||||||||| |||| ||||    
T  16662191 taagaactaaaatcataattaa 16662170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 17914308 - 17914199
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||| ||||| ||||| |||  ||| |||    
T  17914308 gactaattttgataacagagataaaatgtgaggattttaaaaacatttaataaaatgtagggactattcttcaaagagacgcaaaatgtaaagacttaaa 17914209  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  17914208 acatatttaa 17914199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 6298014 - 6298123
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| |||||||||||||||  || | ||||| |||| |||||||    
T  6298014 gactaattttgataacggaaataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaagggaagcaaaatgtaagcactaaaa 6298113  T
Q  128 acatatttaa 137  Q
    ||| ||||||    
T  6298114 acacatttaa 6298123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 6297841 - 6297915
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||    
T  6297841 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaa 6297915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 6297573 - 6297464
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| |||| |||||||||  |||||||||||||||||||| ||||||| |||||||||||||  | || ||||| |||| ||||||     
T  6297573 gactaattttgataacagagagaaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaggggcgcaaaatgtaaggactaaag 6297474  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  6297473 acatatttaa 6297464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 26243378 - 26243482
Alignment:
Q  32 aattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacat 131  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||| || ||| ||||||||||||||    || |||||||||| |||||||||||    
T  26243378 aattttgataatggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaaggagcgcaaaatataaggactaaaaacat 26243477  T
Q  132 attta 136  Q
    |||||    
T  26243478 attta 26243482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 10047856 - 10047931
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||  ||||||||||||||    
T  10047856 agactaattttgataacggagataaaatatgaaaattttaaaaatatttaatgatatataaagactattcttcaaa 10047931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 12489351 - 12489265
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||| |||||||||||||||||||  |||||||||| ||  |||||||||| ||||||||| |||||||||||||||||||||    
T  12489351 attaacagcagagactaattttgataacaaagataaaatgcgaggattttaaaaatatttaatgaaatgtagggactattcttcaaa 12489265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 16662454 - 16662558
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaaaac 129  Q
    ||||||||| |||||||||||| | ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||| || ||||| |||| |||||||||    
T  16662454 taattttgagaacggagataaa-tatgagaattttaaaaacatttaatgaaatgtaggaactattcttcaaa-agagcgcaaaatgtaaggactaaaaac 16662551  T
Q  130 atattta 136  Q
    |||||||    
T  16662552 atattta 16662558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 21006105 - 21006175
Alignment:
Q  32 aattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||||| ||||||    
T  21006105 aattttgataacggagataaaatgtgaggattttaaaaacatttaataaaatgtagggactatttttcaaa 21006175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 44148688 - 44148573
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaa 126  Q
    ||||| ||||||||||||||  |||||||||  ||||||||||| |||| | | ||||||||||||||||||||| ||| |||||||| || | ||||||    
T  44148688 gactatttttgataacggagtaaaaatgtgaggattttaaaaacgtttattaaaatgtagggactattcttcaaa-agagcgtaaaatgtagggactaaa 44148590  T
Q  127 aacatatttaattcaaa 143  Q
    ||||||||||| |||||    
T  44148589 aacatatttaactcaaa 44148573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 44024336 - 44024261
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaat 103  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||  ||| ||||| ||||||||||||||||    
T  44024336 gactaattttgataacggggataaaatgtgatgattttaaaaacatttggtgaaatgtatggactattcttcaaat 44024261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 9800310 - 9800396
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||| | | |||||||||||||||| ||||||||||| |  |||||||||||||||||||| || || |||||||||||||||    
T  9800310 attaacagcataaactaattttgataacgaagataaaatgtaaggattttaaaaacatttaatgaaatatatggactattcttcaaa 9800396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 17915474 - 17915594
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| | ||||||||||||||||| ||||||||||||||  |||| ||||||||||||| | ||||| ||| |||||||||||    |  |||||     
T  17915474 attaacagcaaagactaattttgataacagagataaaatgtgaggatttaaaaaacatttaataaaatgtaagga-tattcttcaaaggagcacaaaatg 17915572  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||||||||||||||||    
T  17915573 taaggactaaaaacatatttaa 17915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 12489517 - 12489614
Alignment:
Q  39 ataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||| |||||||||||| |  |||||||||||||| ||||| ||||| ||||||||||||| |  |||| ||||| |||| |||||||||||||||||    
T  12489517 ataacagagataaaatgtaaggattttaaaaacatt-aatgaaatgtaaggactattcttcataacgacgcaaaatgtaaggactaaaaacatatttaa 12489614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 21005845 - 21005781
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatga 80  Q
    |||||||| | ||| |||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  21005845 attaacaggaaagaataattttgataacggagataaaatatgaagattttaaaaaaatttaatga 21005781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 7344838 - 7344940
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    |||||||||||||||| ||||||| |||  ||||||||||||| |||| | ||||| ||| |||||||||||  | |  ||||| |||| ||||||||||    
T  7344838 taattttgataacggacataaaatatgaggattttaaaaacatataataaaatgtatggattattcttcaaaggggcacaaaatgtaaggactaaaaaca 7344937  T
Q  131 tat 133  Q
    |||    
T  7344938 tat 7344940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 26720441 - 26720358
Alignment:
Q  19 aacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||| ||||| ||||| || |||| |||| |||||||    |||||||||| ||||||||| |||||||||||||||||||||    
T  26720441 aacagcagagattaattgtgttaacagagaaaaaatgtagggattttaaaaatatttaatgaaatgtagggactattcttcaaa 26720358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 39234947 - 39234897
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaat 78  Q
    |||||||||||||||| |||||||||||||| |||||| |||| |||||||    
T  39234947 gactaattttgataactgagataaaatgtgagaatttttaaaatatttaat 39234897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 4694444 - 4694520
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| | | ||||||||||||||  ||||| ||| ||||||||||| | |||||||||||||||||    
T  4694444 attttaaaaacatttacttaaatgtagggactatttatcaaa-agagcgtaaaatatagggactaaaaacatatttaa 4694520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 4624611 - 4624535
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| |||||  ||||||||||||||   | | |||||||||| || ||||||||||||||    
T  4624611 attttaaaaacatttattgaaatgtaaagactattcttcaaagtcatgcaaaatataaggaccaaaaacatatttaa 4624535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 44803542 - 44803609
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactatt 95  Q
    |||||| |||||||| | | ||||||||||| |||||||||||| |||| | | ||||||||||||||    
T  44803542 gactaaatttgataatgaatataaaatgtgagaattttaaaaacttttacttaaatgtagggactatt 44803609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 20682807 - 20682745
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||||  ||||| |||| |||||||||||||||| | | ||||| |||||||||||||||    
T  20682807 taacggagtaaaaatatgaagattttaaaaacatttattaaaatgtaaggactattcttcaaa 20682745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 29917203 - 29917146
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattct 97  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||    
T  29917203 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 29917146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 36155373 - 36155308
Alignment:
Q  37 tgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||  ||||||| |  |||||||||||||||| | | |||||||||||||| ||||||    
T  36155373 tgataacggagtaaaaatgtaaggattttaaaaacatttattaaaatgtagggactattattcaaa 36155308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 21005961 - 21006037
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||   ||| ||||| || | || ||||||||||||||    
T  21005961 attttaaaaacatttattgaaatgtaaggactatttttcaaagccacgcaaaatgtagggaccaaaaacatatttaa 21006037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 22601588 - 22601540
Alignment:
Q  49 taaaatgtgaaaattttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||| | ||||||||||||||||| | | ||||||||||||||||    
T  22601588 taaaatgtaagaattttaaaaacatttatttaaatgtagggactattct 22601540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 44024476 - 44024400
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||| ||||| ||| ||||| |||||||| ||||||   ||| ||||| |||| || ||||||||||||||    
T  44024476 attttaaaaatatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtaaggaccaaaaacatatttaa 44024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 29691648 - 29691527
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| || | ||||||    
T  29691648 attaacagtagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaatggatgcaaaata 29691549  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||||||||||||||||    
T  29691548 taaggactaaaaacatatttaa 29691527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 51906786 - 51906907
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    || |||||     
T  51906786 attaacagcagaaactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgagatgtagggactattcttcaaaggagcgcaaaatg 51906885  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||||||||||||||||    
T  51906886 taaggactaaaaacatatttaa 51906907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 48760097 - 48760203
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||| | ||||||||||||| ||||| | |||||||||||||||||||    
T  48760097 taattttgataacagagataaaatgtgaagattttaaaaacatttaatgaattgtacgaactattcttcaaaaagacgcacaatataagaactaaaaaca 48760196  T
Q  131 tatttaa 137  Q
    |||||||    
T  48760197 tatttaa 48760203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 3296654 - 3296545
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| |||||||||||  | || ||||| |||| |||||||    
T  3296654 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggaatattcttcaaaggggcgcaaaatgtaaggactaaaa 3296555  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  3296554 acatatttaa 3296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 7118143 - 7118252
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||  | || ||||| |||| |||||||    
T  7118143 gactaattttgataatggagataaaatttgagaattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgcaaaatgtaaggactaaaa 7118242  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  7118243 acatatttaa 7118252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 51906531 - 51906422
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||| | ||||||||||||||||||| || || ||||| |||  |||||||    
T  51906531 gactaattttgataacggagataaaatgtgaggatattaaaaacatttaatgaaacgtagggactattcttcaaagaggcgcaaaatgtaaagactaaaa 51906432  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  51906431 acatatttaa 51906422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 3296923 - 3297032
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||||||| | |||||||||||||||||||  | || ||||| |||| |||||||    
T  3296923 gactaattttgataacggagataaaatgtaaggattttaaaaacatttaatgaaacgtagggactattcttcaaagggtcgcaaaatgtaaggactaaaa 3297022  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  3297023 atatatttaa 3297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 30608612 - 30608721
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||| |||||||||||||| || |  ||||| ||||  ||||||    
T  30608612 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaagaggcacaaaatgtaaggtctaaaa 30608711  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  30608712 acatatttaa 30608721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 35166833 - 35166954
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||  |||| |||| ||| ||  |||| |||||     
T  35166833 attaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgctgggattatttttcgaagggacgcaaaatg 35166932  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||||| ||||||||||    
T  35166933 taagcactaaagacatatttaa 35166954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 48554007 - 48553898
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  ||||||||||  |||||||| ||||| |||||||||||||||  |||| ||||| |||| |||||||    
T  48554007 gactaattttgataacggagataaaatgtgaggattttaaaaaggtttaatgaaatgtatggactattcttcaaagggacgcaaaatgtaaggactaaaa 48553908  T
Q  128 acatatttaa 137  Q
    || |||||||    
T  48553907 acgtatttaa 48553898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 30608368 - 30608282
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||| || ||||||||||||||||||||||||||||||||||  |||||||||| || |||||| |||||||||||||||||||||    
T  30608368 attaatagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatataatgaaatgtagggactattcttcaaa 30608282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 34129279 - 34129388
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| ||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||| |  | ||||| ||||  || |||    
T  34129279 gactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaattggtgcaaaatgtaagggctgaaa 34129378  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  34129379 acatatttaa 34129388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 38759807 - 38759706
Alignment:
Q  36 ttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatattt 135  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| |||||  |||||||||||||| || || ||||| |||| |||||||| ||||||    
T  38759807 ttgataacggagataaaatttgaggattttaaaaacatttaatgaaatgtatagactattcttcaaagaggcgcaaaatttaaggactaaaaaaatattt 38759708  T
Q  136 aa 137  Q
    ||    
T  38759707 aa 38759706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 25917003 - 25917116
Alignment:
Q  16 attaacagaagagactaattttgataac--ggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaa 113  Q
    ||||| || ||| ||||||||| |||||  | ||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||||    
T  25917003 attaaaagcagacactaattttcataacacgaagataaaatatgaaaattttaaaaacatttaatgaaatgtatggattattcttcaaatagacgcaaaa 25917102  T
Q  114 tataagaactaaaa 127  Q
    | | || |||||||    
T  25917103 tgtgaggactaaaa 25917116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 26984245 - 26984152
Alignment:
Q  38 gataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacat 131  Q
    |||||| ||||||||||||||  |||||||||||||||||| |  | |||||||||||||||||| || || ||||||||| ||||||||||||    
T  26984245 gataactgagataaaatgtgaggattttaaaaacatttaataaagtctagggactattcttcaaagaggcgcaaaatataaaaactaaaaacat 26984152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 1791515 - 1791577
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaat 78  Q
    |||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  1791515 attaacagcagagactaattttaataacggagataaaatgtaaagattttaaaaacatttaat 1791577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 26168115 - 26168053
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaat 78  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  26168115 attaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaatatttaat 26168053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 34129106 - 34128996
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    ||||||| |||||||||| ||||||||| ||| |||||||||||| |||||| | || ||||||||||||||||||  |||| ||||| |||  | || |    
T  34129106 agactaactttgataacgaagataaaatatgagaattttaaaaacgtttaataaaatatagggactattcttcaaagggacgcaaaatgtaattattaga 34129007  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  34129006 aacatatttaa 34128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 1791259 - 1791150
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| |  ||||| | |||  ||||| |||||||||||||| ||||| ||||||||||||||| ||  ||||||| |||  |||||||    
T  1791259 gactaattttgataacaggtataaagtttgaggatttttaaaacatttaatgaaatgtatggactattcttcaaagaggtgtaaaatttaacgactaaaa 1791160  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  1791159 acatatttaa 1791150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 41510179 - 41510070
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||| ||||||||||| |||  |||||| ||| ||||||| | |||||||||||||||||||||  | || ||||| |||| | |||||    
T  41510179 gactaattttgataagggagataaaatatgaggattttagaaatatttaataaaatgtagggactattcttcaaaggggcgcaaaatgtaaggattaaaa 41510080  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  41510079 atatatttaa 41510070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 5544895 - 5544820
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaat 103  Q
    |||||||||  |||| ||||||||||||||| ||||||||||| ||||||||| || |||| ||||||||||||||    
T  5544895 gactaatttgaataaaggagataaaatgtgagaattttaaaaatatttaatgaaatataggaactattcttcaaat 5544820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 30952980 - 30953051
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttc 99  Q
    |||||||||| ||||| |||||||||||| |  |||||||||||||||||||| |||||||||| |||||||    
T  30952980 gactaattttaataaccgagataaaatgttaggattttaaaaacatttaatgaaatgtagggaccattcttc 30953051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 56106440 - 56106547
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||||||| | || |||| |||||||||||||  | |  ||||| |||  |||||||    
T  56106440 gactaattttaataacggagataaaatgagaggattttaaaaacatttaataaaatataggaactattcttcaaaggggcacaaaatgtaaagactaaaa 56106539  T
Q  128 acatattt 135  Q
    ||||||||    
T  56106540 acatattt 56106547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30047983 - 30048069
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||  ||||||||||||| |||||||||||||||| |||  |||||||||| ||||||||| ||||| | ||| |||||||||    
T  30047983 attaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactgttcttcaaa 30048069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 30062324 - 30062410
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||  ||||||||||||| |||||||||||||||| |||  |||||||||| ||||||||| ||||| | ||| |||||||||    
T  30062324 attaacaacagagactaattttaataacggagataaaatatgaggattttaaaaatatttaatgaaatgtaagaactgttcttcaaa 30062410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 48759938 - 48759814
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| |||||| | ||| |||||||||||  || |||||||||||||| ||||||||||||||||||| | | ||| |||||||| |||||||   ||||    
T  48759938 agaaaattaacggcagaaactaattttgacgacagagataaaatgtgagaattttaaaaacatttaat-aaaagtaaggactatt-ttcaaatgagcgta 48759841  T
Q  111 aaatataagaactaaaaacatatttaa 137  Q
    |||| |||  |||||||||||||||||    
T  48759840 aaatgtaacgactaaaaacatatttaa 48759814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 52398802 - 52398717
Alignment:
Q  17 ttaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||| |||||||||||||||||||| | ||||||| | | ||||||||||| ||||||| | ||| || ||||||||||||||    
T  52398802 ttaacagtagagactaattttgataacgaaaataaaatataagaattttaaaaatatttaataaaatgcagagactattcttcaaa 52398717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 26168371 - 26168482
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtag--ggactattcttcaaatagacgtaaaatataagaactaa 125  Q
    ||||||||||||||||  |||||||||||| | |||||| ||||||||||| | ||||||  |||||||||| ||||  | || ||||| |||| | |||    
T  26168371 gactaattttgataacaaagataaaatgtggagattttagaaacatttaataaaatgtaggaggactattctacaaaggggcgcaaaatgtaaggattaa 26168470  T
Q  126 aaacatatttaa 137  Q
    ||||||||||||    
T  26168471 aaacatatttaa 26168482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 34294536 - 34294454
Alignment:
Q  53 atgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||| |||  ||||| |||| |||||||| ||||||||    
T  34294536 atgtgaagattttaaaaacatttaatgaaatgta-ggactattcttcaaatggacacaaaatgtaag-actaaaaatatatttaa 34294454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 29691891 - 29692001
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| ||||||||||||||  |||||||||| ||||||||| || ||   |||||| ||||||    ||||||||  ||  |||||||    
T  29691891 gactaattttgataacagagataaaatgtgaggattttaaaaatatttaatgaaatataaaaactattattcaaaggagcgtaaaatgcaaagactaaaa 29691990  T
Q  128 acatatttaat 138  Q
    |||||||||||    
T  29691991 acatatttaat 29692001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 40841560 - 40841464
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||| |||| | |||||||| || | || ||||||||||||||    
T  40841560 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 40841464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 2669084 - 2669009
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | | ||||||||||| || ||||||||||||||    
T  2669084 attttaaaaacatttattgaaatgtagggactattctcaaaattg-cataaaatataaggaccaaaaacatatttaa 2669009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 38026119 - 38026194
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || |||| ||||||||||||||    
T  38026119 attttaaaaacatttattgaaatgtagggactattctcaaaattg-cgtaaaatgtaggaaccaaaaacatatttaa 38026194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 54143492 - 54143599
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaatt 139  Q
    ||||||||| ||||||| |  |||||||||||||||| | | |||||||||||||||||||||     | |||||||| | ||||| |||||||||||      
T  54143492 taacggagagaaaatgtaaggattttaaaaacatttattaaaatgtagggactattcttcaaagtcgtgcaaaatatagggactaataacatatttaacc 54143591  T
Q  140 caaaaata 147  Q
    ||||||||    
T  54143592 caaaaata 54143599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 54142424 - 54142362
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||||| ||||||| |  |||||||||||||||| ||| ||||| |||||||||||||||    
T  54142424 taacggagagaaaatgtaaggattttaaaaacatttattgaaatgtatggactattcttcaaa 54142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 2669429 - 2669525
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  2669429 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 2669525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 28957754 - 28957829
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  28957754 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 28957829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 40841905 - 40841980
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| | |||||||| || | || ||||||||| ||||    
T  40841905 attttaaaaacatttattgaaatgtagggactattcttaaaatcg-cgtaaaatgtagggaccaaaaacataattaa 40841980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 58
Target Start/End: Original strand, 5545161 - 5545192
Alignment:
Q  27 agactaattttgataacggagataaaatgtga 58  Q
    ||||||||||||||||||||||||||||||||    
T  5545161 agactaattttgataacggagataaaatgtga 5545192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 35469045 - 35469115
Alignment:
Q  31 taattttgataacggagat-aaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaa 101  Q
    ||||||||||||||||||| ||||| |||  ||||||||||| |||||||| ||||| ||| ||||||||||    
T  35469045 taattttgataacggagataaaaatttgaggattttaaaaac-tttaatgaaatgtaaggattattcttcaa 35469115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 46262733 - 46262678
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactatt 95  Q
    ||||||||| |||||||  |||||||||||||||| | ||| ||||||||||||||    
T  46262733 taacggagaaaaaatgtagaaattttaaaaacattcattgaaatgtagggactatt 46262678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 55347981 - 55348023
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaat 103  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||    
T  55347981 attttaaaaacatttattgaaatgtagggactattcttaaaat 55348023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 12922740 - 12922683
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattct 97  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||    
T  12922740 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 12922683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 17288385 - 17288426
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  17288385 attttaaaaacatttattgaaatgtagggactattattcaaa 17288426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 10580118 - 10580042
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||   ||| ||||| || | || ||||||||||||||    
T  10580118 attttaaaaacatttattgaaatgtaaggactatttttcaaagtcacgcaaaatgtatggaccaaaaacatatttaa 10580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 12108301 - 12108337
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  12108301 attttaaaaacatttattgaaatgtagggactattct 12108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 19310837 - 19310789
Alignment:
Q  89 gactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||| || || ||||| |||| |||||||||||||||||    
T  19310837 gactattcttcaaagaggcgcaaaatgtaaggactaaaaacatatttaa 19310789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 28957388 - 28957313
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  28957388 attttaaaaacatttattgaaatgtagggattattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 28957313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 31227956 - 31227881
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  31227956 attttaaaaacatttattgaaatgtagggattattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 31227881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 54168835 - 54168911
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||| ||||| | | ||||||||| |||||||||||   ||| |||||||| | | |||||||||||||||    
T  54168835 attttaaaaatatttattaaaatgtagggattattcttcaaagtcacgcaaaatatagggattaaaaacatatttaa 54168911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 21182430 - 21182299
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | || |||||     
T  21182430 attaacaacagagactaattttgataacagagataaaatgtgaaaattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatg 21182331  T
Q  116 taagaactaaaaacatatttaattcaaaaata 147  Q
    |||| |||||||||||||||||  ||||||||    
T  21182330 taaggactaaaaacatatttaacccaaaaata 21182299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 2517525 - 2517415
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||| ||||||    
T  2517525 agactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagagacgcaaaatgtaaggactaaa 2517426  T
Q  127 aacatatttaa 137  Q
    || ||||||||    
T  2517425 aatatatttaa 2517415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 3691351 - 3691477
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| |||||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||  | || |    
T  3691351 agaaaattaacagcatggactaattttgataacggagataaaatgtgaagattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgca 3691450  T
Q  111 aaatataagaactaaaaacatatttaa 137  Q
    ||||| ||| |||||||||||||||||    
T  3691451 aaatacaaggactaaaaacatatttaa 3691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 2191328 - 2191219
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||  | || ||||| |||| |||||||    
T  2191328 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggcgcaaaatgtaaggactaaaa 2191229  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  2191228 acatatttaa 2191219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 21217034 - 21216925
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| || || ||||| |||| |||||||    
T  21217034 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 21216935  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  21216934 agatatttaa 21216925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 21217300 - 21217409
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||| |||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||  | || ||||| |||| |||||||    
T  21217300 gactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaa 21217399  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  21217400 acatatttaa 21217409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 21265102 - 21264993
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||| |||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||  | || ||||| |||| |||||||    
T  21265102 gactaattttgttaacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagcggcgcaaaatgtaaggactaaaa 21265003  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  21265002 acatatttaa 21264993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 21265368 - 21265477
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| || || ||||| |||| |||||||    
T  21265368 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 21265467  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  21265468 agatatttaa 21265477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 7083645 - 7083525
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||  ||| |||| |||| |||| |||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||| ||||||||||     
T  7083645 attaacaacagatactattttttataagggagataaaatgtgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaatggacgtaaaatg 7083546  T
Q  116 taagaactaaaaacatattta 136  Q
    |||| | ||||||||||||||    
T  7083545 taaggattaaaaacatattta 7083525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 3691194 - 3691094
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||| |||||||||||||  | || |||||||||| |||||||    
T  3691194 gactaattttgataacggtgataaaatgtgaggattttaaaaacatttaatgaaatgtaggaactattcttcaaaagggcgcaaaatataaggactaaaa 3691095  T
Q  128 a 128  Q
    |    
T  3691094 a 3691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 32114288 - 32114168
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaat-gatatgtagggactattcttcaaatagacgtaaaat 114  Q
    |||||||| || |||||||||||||| | ||||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||  | ||||||||    
T  32114288 attaacagtagcgactaattttgatatcagagataaaatgtgaggattttaaaaacatttaatagat-tgtagggactattcttcaaa-gggcgtaaaat 32114191  T
Q  115 ataagaactaaaaacatatttaa 137  Q
     |||| |||||||||||||||||    
T  32114190 gtaaggactaaaaacatatttaa 32114168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 39729584 - 39729686
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||| |||||||||||||||||||||  |||||||||| ||||||||| || ||  ||||||||||||||  |||| |||||||||| ||||||    
T  39729584 agactaatttcgataacggagataaaatgtgaggattttaaaaatatttaatgaaatataaagactattcttcaaactgacgcaaaatataaggactaaa 39729683  T
Q  127 aac 129  Q
    |||    
T  39729684 aac 39729686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 21267347 - 21267456
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||| | | |||||||||||  ||||| |||||||||||||| |||||||||||||||||||||    || ||||| |||| |||||||    
T  21267347 gactaattttgataatgaatataaaatgtgaggatttttaaaacatttaatgaaatgtagggactattcttcaaaggatcgaaaaatgtaaggactaaaa 21267446  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  21267447 acatatttaa 21267456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 24093267 - 24093158
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||| |||||||||||| ||| || ||||||  |||||||||||||||||||| |||||||||||||||||||||  | || ||| | |||| |||||||    
T  24093267 gactgattttgataacgaagagaagatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggcgcaaagtgtaaggactaaaa 24093168  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  24093167 acatatttaa 24093158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 32114450 - 32114559
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| |||||||| ||||| ||||||||||| ||||||||| ||||| |||||||||||  || || || ||||| |||| |||||||    
T  32114450 gactaattttgataacagagataaagtgtgagaattttaaaaatatttaatgaaatgtaaggactattctttgaagaggcgcaaaatgtaaggactaaaa 32114549  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  32114550 atatatttaa 32114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 24093535 - 24093610
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaat 103  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||||| | || |||| ||||||||||||||    
T  24093535 gactaattttgataacggagataaaatgtaaggattttaaaaacatttaataaaatataggcactattcttcaaat 24093610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 32860923 - 32860816
Alignment:
Q  30 ctaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaac 129  Q
    ||||||||||| ||||||||||||||| |  |||||||||||||||||||| || ||  ||||||| ||||||  |||| |||||||||   ||||||||    
T  32860923 ctaattttgatcacggagataaaatgttaggattttaaaaacatttaatgaaatataacgactatttttcaaagggacgcaaaatataaaggctaaaaac 32860824  T
Q  130 atatttaa 137  Q
    ||||||||    
T  32860823 atatttaa 32860816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 2606635 - 2606695
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagg 88  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||||| |||||||    
T  2606635 gactaattttgatagcggagataaaatatgagaattttaaaaacatttaatgaaatgtagg 2606695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 10706618 - 10706702
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||| || ||||| |||||||||||||||||||||||||  |||||||||| ||||||||| || ||  ||||||||||||||    
T  10706618 attaacagcagggactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatata--gactattcttcaaa 10706702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Original strand, 3624924 - 3624966
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  3624924 aattttaaaaacatttattgaaatgtagggactattcttcaaa 3624966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 1804309 - 1804234
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  1804309 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 1804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 1804675 - 1804750
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  1804675 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 1804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 6476164 - 6476089
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  6476164 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 6476089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 6476530 - 6476605
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  6476530 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 6476605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 10709553 - 10709477
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||| |||||||||||||||   ||| ||||| |||  || ||||||||||||||    
T  10709553 attttaaaaacatttattgaaatgtaaggactattcttcaaaatcacgcaaaatctaaagaccaaaaacatatttaa 10709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 11451199 - 11451274
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  11451199 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 11451274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 27377726 - 27377651
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  27377726 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 27377651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 2035707 - 2035610
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||||    |||||||||||||||| | | ||||||||| ||||||| ||| |||  |||||||||| | || ||||||||||||||    
T  2035707 taacggagataaaatgtagggattttaaaaacatttattaaaatgtagggattattctttaaa-agagggtaaaatatagggaccaaaaacatatttaa 2035610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 10710841 - 10710914
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatat 133  Q
    ||||||||||||||||| ||| ||| | || ||||||||||||   ||| |||||||||| || ||||||||||    
T  10710841 aattttaaaaacatttattgaaatgcaagggctattcttcaaagtcacgcaaaatataaggaccaaaaacatat 10710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 39600851 - 39600774
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||| | |||||||||||| |||||  ||||||||||  || ||||| ||||| |||| | |||||||||||||||    
T  39600851 aattttgataacatttaatgaaatgtaaagactattctttcaagagacgcaaaatgtaaggattaaaaacatatttaa 39600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 2036615 - 2036691
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||| | ||| ||||||||||||||||| ||| ||  ||||||| || | | ||| |||||||||||    
T  2036615 attttaaaaacattaattgaaatgtagggactattctttaaaaaggtgtaaaatgtagggattaataacatatttaa 2036691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 2191466 - 2191382
Alignment:
Q  63 tttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaattcaaaaata 147  Q
    |||||||||||||| | | ||||| ||| |||||||||||   | | ||||| |||| || ||||||||||||||||| ||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtcaagcaaaatgtaaggaccaaaaacatatttaattctaaaata 2191382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 87239 - 87349
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||  |||  |||||||||| ||||||    
T  87239 agactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagggacacaaaatataaggactaaa 87338  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  87339 aacatatttaa 87349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 31588313 - 31588435
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa-tagacgtaaaat 114  Q
    |||||||| || ||||||||||||||||||||||||||||| |  |||||||||| ||||||||| |||||||||||||||||||||   |||| |||||    
T  31588313 attaacagcagggactaattttgataacggagataaaatgttaggattttaaaaatatttaatgaaatgtagggactattcttcaaaggggacgcaaaat 31588412  T
Q  115 ataagaactaaaaacatatttaa 137  Q
     |||| |||||||||||||||||    
T  31588413 gtaaggactaaaaacatatttaa 31588435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 8750339 - 8750448
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||||| |||  |||||||| ||||||||| | ||||||||||||||||||||| | ||| ||||| |||| |||||||    
T  8750339 gactaattttgataacggagataaaatatgaggattttaaacacatttaataaaatgtagggactattcttcaaagaaacgcaaaatgtaaggactaaaa 8750438  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  8750439 acatatttaa 8750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 31176618 - 31176509
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||| |||||||| |||  |||||||||||||||||||| ||||| ||||| |||||||||  |||| |||||||||| |||||||    
T  31176618 gactaattttgataacggggataaaatatgacgattttaaaaacatttaatgaaatgtatggactgttcttcaaagggacgcaaaatataaggactaaaa 31176519  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  31176518 acatatttaa 31176509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 13987406 - 13987283
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaatttta-aaaacatttaatgatatgtagggactattcttcaaatagacgtaaaat 114  Q
    |||||||| ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| || ||| || |||||||||||  | ||  ||||    
T  13987406 attaacagcagagactaattttaataacggagataaaatgtgagaattttaaaaaacatttaatgaaatatagagattattcttcaaaagggcgcgaaat 13987307  T
Q  115 ataagaactaaaaacatatttaat 138  Q
     |||||||||||||||||||||||    
T  13987306 gtaagaactaaaaacatatttaat 13987283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 3406839 - 3406957
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| |||||||||||||| ||||||||||| ||||||| | || | || ||||||||||||| || || ||||||||| ||||||||    
T  3406839 gactaattttgataacagagataaaatgtgagaattttaaaaatatttaataaaatattggaactattcttcaaaaaggcgcaaaatataa-aactaaaa 3406937  T
Q  128 acatatttaattcaaaaata 147  Q
    ||||||||||  ||||||||    
T  3406938 acatatttaacccaaaaata 3406957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 16284385 - 16284276
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||| | || ||  |||||||||||||| | ||| ||||| |||| |||||||    
T  16284385 gactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatataaagactattcttcaaaaaaacgcaaaatgtaaggactaaaa 16284286  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  16284285 acatatttaa 16284276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 8648043 - 8648153
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||||||||||||||| |||||||||  |||||||||| ||||||||| |||||  ||||||||||| ||  |||| ||||| |||| ||||||    
T  8648043 agactaattttgataacggagaaaaaatgtgaggattttaaaaatatttaatgaaatgtaaagactattcttccaaaggacgcaaaatgtaaggactaaa 8648142  T
Q  127 aacatatttaa 137  Q
    | |||||||||    
T  8648143 atcatatttaa 8648153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 18999477 - 18999368
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaa 126  Q
    |||||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||| ||||||||||||||| |||  | ||||| |||| ||||||    
T  18999477 gactaattttgataacggagataaaatgagaggattttaaaaatatttaatgaaatgtatggactattcttcaaa-agagtgcaaaatgtaaggactaaa 18999379  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  18999378 aacatatttaa 18999368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 18999622 - 18999728
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    |||||||||||||  |||||||||||||  |||||||||| ||||||||| ||||| |||||||||||||||  || | ||||| |||| ||||||||||    
T  18999622 taattttgataacaaagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaaaatgaagcaaaatgtaaggactaaaaaca 18999721  T
Q  131 tatttaa 137  Q
    |||||||    
T  18999722 tatttaa 18999728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 30415451 - 30415571
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    ||||||||  ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| |||||||||||||||||| ||    ||||||||     
T  30415451 attaacagctgagcctaattttgataacggagacaaaatgtgaggattttaaaaaca-ttaatgaaatgtagggactattcttcgaaggagcgtaaaatg 30415549  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| ||||||| |||||||||    
T  30415550 taaggactaaaaccatatttaa 30415571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 8750124 - 8750012
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaacta 124  Q
    |||||||||||||||||||| |||||||| || |  |||||||||| ||||||||| ||||||||| |||| ||||||  | || ||||| |||||| ||    
T  8750124 agagactaattttgataacgaagataaaacgttacgattttaaaaatatttaatgaaatgtagggattattattcaaaggggcgcaaaatgtaagaatta 8750025  T
Q  125 aaaacatatttaa 137  Q
    |||||||||||||    
T  8750024 aaaacatatttaa 8750012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 3935661 - 3935747
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||| ||||||||||||| |||||  |||||||||||||  |||||||||||| ||||||| ||||||||| |||||||||||    
T  3935661 attaacagcagagactaattttaataacaaagataaaatgtgaggattttaaaaacaattaatgaaatgtagggattattcttcaaa 3935747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 1650110 - 1650007
Alignment:
Q  33 attttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacata 132  Q
    |||||||||||||||||||||| | | ||||||||||||||||||| | ||||||  | |||||||||||| | || |||||||||  ||||||||||||    
T  1650110 attttgataacggagataaaatataagaattttaaaaacatttaataaaatgtagataatattcttcaaat-ggcgcaaaatataaatactaaaaacata 1650012  T
Q  133 tttaa 137  Q
    |||||    
T  1650011 tttaa 1650007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 15978499 - 15978391
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattctt-caaatagacgtaaaatataagaactaaa 126  Q
    |||||||||| ||||| ||||||||||||||   ||||||||||||||||||| || ||| |||||||||| |||| | ||  |||||||||| ||||||    
T  15978499 gactaattttaataaccgagataaaatgtgag--ttttaaaaacatttaatgaaatatagagactattcttccaaaaaaacacaaaatataaggactaaa 15978402  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  15978401 aacatatttaa 15978391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 87107 - 87021
Alignment:
Q  51 aaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||||||||||||||| ||||||||  ||||||||| ||  ||| |||||||||  |||||||||||||||||    
T  87107 aaatgtgaagattttaaaaacatttaatgaaatgtaggggttattcttcagatgaacgcaaaatataaagactaaaaacatatttaa 87021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 18339184 - 18339110
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||||||||| | |||||||||||||||  |||||||||||||||||||| || ||| ||||||||||||||    
T  18339184 gactaattttgatgatggagataaaatgtgaggattttaaaaacatttaatgaaatatagagactattcttcaaa 18339110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 38834746 - 38834823
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactat 94  Q
    |||||||| |||||||||||| |||||| ||||| |||||||  ||||||||||||||||||||| |||||||||||||    
T  38834746 attaacagcagagactaattt-gataacagagatcaaatgtgtgaattttaaaaacatttaatgaaatgtagggactat 38834823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 20892544 - 20892632
Alignment:
Q  48 ataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||||| ||||||||||||||||||| | | |||| ||||||||||||||| |||| ||||| |||| | |||||||||||||||    
T  20892544 ataaaatgtgataattttaaaaacatttaattaaacgtagagactattcttcaaat-gacgcaaaatttaaggattaaaaacatatttaa 20892632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 22231172 - 22231248
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||| ||||||||||||||| || |||||||||||||| |||  | || |||||||||| |||||||||||||||||    
T  22231172 atttcaaaaacatttaatgaaatatagggactattctttaaaggggcgcaaaatataaggactaaaaacatatttaa 22231248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 35383368 - 35383292
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtag 87  Q
    |||| |||||||| |  |||||||||||||||||| |||||||| |||  |||||||||||||||||||| ||||||    
T  35383368 agaaaattaacagcatggactaattttgataacggggataaaatatgaggattttaaaaacatttaatgaaatgtag 35383292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 18340639 - 18340738
Alignment:
Q  38 gataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||| ||||||| ||| |||| |||||||||||||||||||| ||||| ||||||||||| |||  | || || || |||| ||||||| |||||||||    
T  18340639 gataatggagatacaatatgaagattttaaaaacatttaatgaaatgtaaggactattcttaaaaggggcgcaacatgtaaggactaaaatcatatttaa 18340738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 3935504 - 3935451
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaat 78  Q
    |||||||||| ||||||| |||||||||||||||  ||||||||||||||||||    
T  3935504 agagactaatattgataatggagataaaatgtgaggattttaaaaacatttaat 3935451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 3406567 - 3406461
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||| |||||||||| | |  |||||||||||||||||||| || || | ||||||||||  | ||||| || || |||| | |||||||     
T  3406567 taattttgataacagagataaaatataaggattttaaaaacatttaatgaaatatatgaactattcttcgtagagacgcaatatttaaggattaaaaacc 3406468  T
Q  131 tatttaa 137  Q
    |||||||    
T  3406467 tatttaa 3406461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 19352398 - 19352301
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||  ||||||| | ||||||||||||||||| ||| ||||| ||||||||  ||||| |   ||||||| || |||| ||||||||||||||    
T  19352398 taacggaggaaaaatgtaagaattttaaaaacatttattgaaatgtaaggactatttgtcaaaaaagggtaaaatgtaggaaccaaaaacatatttaa 19352301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 29751768 - 29751724
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacat 73  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  29751768 gactaattttgataacg-agataaaatgtgagaattttaaaaacat 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 29752434 - 29752390
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacat 73  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  29752434 gactaattttgataacg-agataaaatgtgagaattttaaaaacat 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 37813454 - 37813377
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||||||| ||||||| ||||| |||||||||||||||  | |||||| | || | |||||||| ||||||||    
T  37813454 aattttaaaaacacttaatgaaatgtatggactattcttcaaaatggcgtaaactgtagggactaaaaatatatttaa 37813377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 119262 - 119186
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||| ||||||||||| |||   ||| ||||| |||| || ||||||||||||||    
T  119262 attttaaaaacatttattgaaatgtaaggactattctttaaagtcacgcaaaatctaaggaccaaaaacatatttaa 119186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 119796 - 119868
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatat 133  Q
    |||||||||||||||| ||| ||| | |||||||||||||||   ||| |||||||||| || ||||||||||    
T  119796 attttaaaaacatttattgaaatgcaaggactattcttcaaagtcacgcaaaatataaggaccaaaaacatat 119868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 5747204 - 5747279
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  5747204 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 5747279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 6543492 - 6543417
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  6543492 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 6543417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 21949477 - 21949402
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  21949477 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 21949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 21949843 - 21949918
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| | |||||||| || | || ||||||||| ||||    
T  21949843 attttaaaaacatttattgaaatgtagggactattcttaaaatcg-cgtaaaatgtagggaccaaaaacataattaa 21949918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 31162498 - 31162423
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||| |||||   ||||||||| || | || ||||||||||||||    
T  31162498 attttaaaaacatttattgaaatgtagggactattc-tcaaaatcacgtaaaatgtagggaccaaaaacatatttaa 31162423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 19353081 - 19353157
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||  |||||||||||||||   ||  ||||| |||| || ||||||||||||||    
T  19353081 attttaaaaacatttattgaaatgtgaggactattcttcaaagtcacacaaaatctaaggaccaaaaacatatttaa 19353157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 28641238 - 28641163
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  28641238 attttaaaaacatttattgaaatgtagggattattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 28641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 28641604 - 28641640
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  28641604 attttaaaaacatttattgaaatgtagggactattct 28641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 39402289 - 39402253
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  39402289 attttaaaaacatttattgaaatgtagggactattct 39402253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 5683523 - 5683649
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| |||||||| || |||||||||||||| ||||||||||||  ||  |||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  5683523 agaaaattaacagcagtgactaattttgataccggagataaaatacgaggattttaaaaatatttaatgaaatgtagggactattcttcaaaaagacgta 5683622  T
Q  111 aaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||||||||||||    
T  5683623 aaatataaggactaaaaacatatttaa 5683649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 50359247 - 50359117
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| |||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||| ||| | || ||||||    
T  50359247 attaacagcagag-ctaattttgataacggaaataaaatgtgaagatttaaaaaacatttaatgaaatgtagggactattcttcgaattggcgcaaaata 50359149  T
Q  116 taagaactaaaaacatatttaattcaaaaata 147  Q
    |||| |||||||| ||||||||  ||||||||    
T  50359148 taaggactaaaaaaatatttaacccaaaaata 50359117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 31436350 - 31436471
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||| ||||||||||||||  |||  |||||     
T  31436350 attaacagcagagactaattttgataacggagataaaatgtgataattttaaaaacatttaataaaatatagtgactattcttcaaaaggacacaaaatg 31436449  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| ||||||| |||||||||    
T  31436450 taaggactaaaatcatatttaa 31436471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 5683282 - 5683163
Alignment:
Q  18 taacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatata 117  Q
    |||||| || ||||||||||||||| | |||||||||||||  |||||||| ||||||||||| |||||||||||||| |||||| ||||| ||||| ||    
T  5683282 taacagcagggactaattttgataatgaagataaaatgtgaggattttaaatacatttaatgaaatgtagggactatttttcaaagagacgcaaaatgta 5683183  T
Q  118 agaactaaaaacatatttaa 137  Q
    || | |||||||||||||||    
T  5683182 aggattaaaaacatatttaa 5683163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 5172856 - 5172747
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||| |||||||||| ||||||||||| |  |||||||||||||||||||| |||||| |||||||||||||||   || ||||| ||||||||||||    
T  5172856 gactaaatttgataacgtagataaaatgtaaggattttaaaaacatttaatgaaatgtagagactattcttcaaatgagcgcaaaatgtaagaactaaaa 5172757  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  5172756 acatatttaa 5172747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 9880595 - 9880486
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||| |||| |||||||||  || | ||||| |||| |||||||    
T  9880595 gactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtagagacttttcttcaaagggatgcaaaatgtaaggactaaaa 9880496  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  9880495 acatatttaa 9880486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 9880757 - 9880878
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||| | || |||  ||||||||||||||   || |||||     
T  9880757 attaacagcagggactaattttgataacagagataaaatgtgagaattttaaaaacatttaataaaatatagaaactattcttcaaatgagcgcaaaatg 9880856  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||||| |||||||||||||||    
T  9880857 taagaattaaaaacatatttaa 9880878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 19895523 - 19895402
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| | ||||||||||||||||||||||||||||||||   ||||||||||||||||| | ||||| |||||||||||||||    | ||||||     
T  19895523 attaacagtatagactaattttgataacggagataaaatgtgagggttttaaaaacatttaattaaatgtatggactattcttcaaacgagcataaaatg 19895424  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||||||||||||||||    
T  19895423 taaggactaaaaacatatttaa 19895402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 19895778 - 19895889
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||||||||| | |||||| ||||||||||||||||    ||||||| ||  ||||||    
T  19895778 agactaattttgataacgaagataaaatatgagaattttaaaaacatttaataaaatgtagagactattcttcaaataattttaaaatacaatgactaaa 19895877  T
Q  127 aacatatttaat 138  Q
    ||||||||||||    
T  19895878 aacatatttaat 19895889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 18180257 - 18180366
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||| | ||||| |||||||||||||||  | || |||||||||  | |||||    
T  18180257 gactaattttgataacggagataaaatatgaggattttaaaaacatttaataaaatgtatggactattcttcaaagtggcgcaaaatataaagattaaaa 18180356  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  18180357 acatatttaa 18180366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 50359415 - 50359527
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaacta 124  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||  | |||||||||||||||| | || ||||| |||| | ||    
T  50359415 agagactaattttgataacagagataaaatgtgaggattttaaaaacatttaatgaaataaaaggactattcttcaaatgggcgcaaaatgtaaggaata 50359514  T
Q  125 aaaacatatttaa 137  Q
     ||||||||||||    
T  50359515 taaacatatttaa 50359527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 18180007 - 18179881
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| || || |||||||| ||||||  |  | |    
T  18180007 agaaaattagcagtagagactaattttgataacggagataaaatgtgaggattttaaaaacaattaatgaaatataaggactatttttcaaaggggtgca 18179908  T
Q  111 aaatataagaactaaaaacatatttaa 137  Q
    |||| |||| ||||||||||| |||||    
T  18179907 aaatgtaaggactaaaaacatgtttaa 18179881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 3591316 - 3591425
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||| |||| |||||||||||||||  |||||||||||||||||| | ||||| ||||||||||||||||   || ||||| |||| |||||||    
T  3591316 gactaatttttataatggagataaaatgtgaggattttaaaaacatttaataaaatgtatggactattcttcaaatgagcgcaaaatgtaaggactaaaa 3591415  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  3591416 atatatttaa 3591425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 48155258 - 48155367
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||||||| || |||| || ||||||||||    || |||||||||| | |||||    
T  48155258 gactaattttgataacatagataaaatgtgaagattttaaaaacatttaatgaaatataggaacaattcttcaaaggagcgcaaaatataaggattaaaa 48155357  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  48155358 acatatttaa 48155367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 48155087 - 48154976
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaacta 124  Q
    ||||| ||||||||||| |||||||||||| |||  |||||||||||||||||| | ||||| ||||||||||| |||  | ||||||||||||| | ||    
T  48155087 agagattaattttgatatcggagataaaatatgaggattttaaaaacatttaataaaatgtaaggactattctt-aaagcggcgtaaaatataaggatta 48154989  T
Q  125 aaaacatatttaa 137  Q
    |||||||||||||    
T  48154988 aaaacatatttaa 48154976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 6751158 - 6751039
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||| ||  ||||| |||||||||||||| || || ||| ||||||||||| || |  ||||| |||  ||||||     
T  6751158 gactaattttgataacggagataaaatgcgatgatttttaaaacatttaatgaaatataaggattattcttcaaagaggcacaaaatgtaaagactaaac 6751059  T
Q  128 acatatttaattcaaaaata 147  Q
    ||||||||||| ||||||||    
T  6751058 acatatttaatccaaaaata 6751039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 47541626 - 47541527
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    |||||||||||| | | |||||||||||  |||||||||||||||||||| || ||||||||||||||||||  ||| |||||| |||| ||||||||||    
T  47541626 taattttgataatgaatataaaatgtgaggattttaaaaacatttaatgaaatatagggactattcttcaaagggacataaaatgtaaggactaaaaaca 47541527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 4288422 - 4288523
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    |||||||||||||| | |||||||||||  |||||||||||||||||||     ||||||||||||||||||  | || |||||||||| ||||||||||    
T  4288422 taattttgataacgaatataaaatgtgaggattttaaaaacatttaatg-----tagggactattcttcaaaggggcgcaaaatataaggactaaaaaca 4288516  T
Q  131 tatttaa 137  Q
    |||||||    
T  4288517 tatttaa 4288523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 6751320 - 6751442
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacg-taaaat 114  Q
    |||||||| |||||||||||||||||||  |||||||||||||  |||||||||| ||||||||| ||||| ||||| ||||| |||  ||||  |||||    
T  6751320 attaacagcagagactaattttgataacaaagataaaatgtgaggattttaaaaaaatttaatgaaatgtaaggacttttctttaaagggacgccaaaat 6751419  T
Q  115 ataagaactaaaaacatatttaa 137  Q
     |||  |||||||||||||||||    
T  6751420 gtaatgactaaaaacatatttaa 6751442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 45664801 - 45664689
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaacta 124  Q
    |||||||| ||||||||||||||  ||||||||   |||||||||||||||| | | |||||| |||||||||||||||   |||||||| || | ||||    
T  45664801 agagactatttttgataacggagtaaaaatgtggggattttaaaaacatttattaaaatgtagagactattcttcaaatgagcgtaaaatgtagggacta 45664702  T
Q  125 aaaacatatttaa 137  Q
    |||||||||||||    
T  45664701 aaaacatatttaa 45664689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 1500993 - 1501069
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||| | |||||||||||||||||    
T  1500993 attttaaaaacatttaatgaaatgtagggactattcttcaaa-agagcgcaaaatatagggactaaaaacatatttaa 1501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 47541803 - 47541851
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacattta 76  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  47541803 gactaattttgataacggagataaaatgtgaggattttaaaaacattta 47541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 36793586 - 36793662
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| | | |||||| ||||||||||||||   ||| |||||||| | |||||||||||||||||    
T  36793586 attttaaaaacatttattaaaatgtagagactattcttcaaagtcacgcaaaatatagggactaaaaacatatttaa 36793662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 19976272 - 19976165
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||  |||||||||||||   |||||||||||||||||| | |  || | ||||||||||||| |  || ||||| |||  ||||||||||    
T  19976272 taattttgataatagagataaaatgtggggattttaaaaacatttaataaaaaataagaactattcttcaaagaagcgcaaaatgtaacgactaaaaaca 19976173  T
Q  131 tatttaat 138  Q
    ||||||||    
T  19976172 tatttaat 19976165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 47410845 - 47410950
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaatt 139  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||      
T  47410845 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaacc 47410943  T
Q  140 caaaaat 146  Q
    |||||||    
T  47410944 caaaaat 47410950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 42723235 - 42723284
Alignment:
Q  29 actaattttgataacggagataaaatgtgaaaattttaaaaacatttaat 78  Q
    |||||||||| ||||||| |||||||||||  ||||||||||||||||||    
T  42723235 actaattttgctaacggatataaaatgtgaggattttaaaaacatttaat 42723284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 12869666 - 12869742
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||| |||     |||||||||| | || ||||||||||||||    
T  12869666 attttaaaaacatttattgaaatgtagggactattctttaaaggagggtaaaatatagggaccaaaaacatatttaa 12869742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 32266560 - 32266485
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  32266560 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 32266485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 37927593 - 37927522
Alignment:
Q  66 aaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||| ||||||| | |||||| ||||||||||||| |||| ||||||||||||  |||||||||||||||||    
T  37927593 aaaaatatttaatcaaatgtagagactattcttcaa-tagagcgtaaaatataaagactaaaaacatatttaa 37927522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 40124153 - 40124078
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||| |||||   | ||||||| |||| || ||||||||||||||    
T  40124153 attttaaaaacatttattgaaatgtagggactattc-tcaaaatcaagtaaaatgtaaggaccaaaaacatatttaa 40124078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 47410500 - 47410425
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | | ||||||||| | || ||||||||||||||    
T  47410500 attttaaaaacatttattgaaatgtagggactattctcaaaattg-cataaaatatagggaccaaaaacatatttaa 47410425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 98
Target Start/End: Complemental strand, 1500137 - 1500100
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattctt 98  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  1500137 attttaaaaacattcaatgaaatgtagggactattctt 1500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 8997418 - 8997382
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  8997418 attttaaaaacatttattgaaatgtagggactattct 8997382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 32266926 - 32267001
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  32266926 attttaaaaacatttattgaaatgtagggattattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 32267001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 51471449 - 51471337
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaacta 124  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||  |||||||||||||  |||| ||||| |||||||||    
T  51471449 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaactattcttcaaagggacgcaaaatgtaagaacta 51471350  T
Q  125 aaaacatatttaa 137  Q
    | |||||||||||    
T  51471349 agaacatatttaa 51471337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 44504203 - 44504100
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||     
T  44504203 gactaattttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaatggacacaaaatgtaagaactaaag 44504104  T
Q  128 acat 131  Q
    ||||    
T  44504103 acat 44504100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 22814424 - 22814298
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| ||||| || || ||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||  | || |    
T  22814424 agaaaattaatagcagggactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtatggactattcttcaaaggggcgca 22814325  T
Q  111 aaatataagaactaaaaacatatttaa 137  Q
    |||| |||||| |||||||||||||||    
T  22814324 aaatgtaagaattaaaaacatatttaa 22814298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 37172192 - 37172084
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||| |||||||||| |||||  || ||||| |||| |||||||    
T  37172192 gactaattttgataacggagataaactgtgaggattttaaaaacatttaatgaaatgtagagactattctttaaataagcgcaaaatgtaaggactaaaa 37172093  T
Q  128 acatattta 136  Q
    | |||||||    
T  37172092 aaatattta 37172084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 9217931 - 9217857
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  9217931 gactaattttaataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 9217857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 44504368 - 44504474
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||  |  | ||||| |||| ||||||||||    
T  44504368 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatgtaaggactaaaaaca 44504467  T
Q  131 tatttaa 137  Q
     ||||||    
T  44504468 catttaa 44504474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 13637759 - 13637868
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||| |||||||||||||||||||||||||  |||||||||| ||||||||| |||||| ||||||||||||||  | || ||||| |||| |||| ||    
T  13637759 gactagttttgataacggagataaaatgtgaggattttaaaaatatttaatgaaatgtagagactattcttcaaaggggcgcaaaatgtaaggactagaa 13637858  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  13637859 acatatttaa 13637868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 43933551 - 43933442
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||| |||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||  | |  ||||| |||| |||||||    
T  43933551 gactaattttgataacgaagataaaatgtgaggattttaaaaatatttaatgaaatgtagggactattcttcaaacgggcacaaaatgtaaggactaaaa 43933452  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  43933451 atatatttaa 43933442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 9218481 - 9218601
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||  |||||||||||| ||||||| |||||||||||||  |||||||||||||||||||| || ||||||||||||||||||    || |||||     
T  9218481 attaacaacagagactaattt-gataacgaagataaaatgtgatgattttaaaaacatttaatgaaatatagggactattcttcaaaggagcgcaaaatg 9218579  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||  |||||||||||||||||    
T  9218580 taatgactaaaaacatatttaa 9218601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 43933708 - 43933815
Alignment:
Q  29 actaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaa 128  Q
    ||||||||||||||| |||||||||| |||  |||||||||||||||||||| | |||| ||||||| ||||||| |||| ||||| | || ||||||||    
T  43933708 actaattttgataacagagataaaatatgaggattttaaaaacatttaatga-aagtagagactatttttcaaatggacgcaaaatgtgaggactaaaaa 43933806  T
Q  129 catatttaa 137  Q
    |||||||||    
T  43933807 catatttaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 51755903 - 51755967
Alignment:
Q  38 gataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  51755903 gataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaa 51755967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 25770429 - 25770326
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||||  ||||||||||||  ||| |||||||||||||||| |||||||||||||||||||||  ||   ||||| |||| ||||||||||    
T  25770429 taattttgataacgatgataaaatgtgaggattctaaaaacatttaatgaaatgtagggactattcttcaaagggatacaaaatgtaaggactaaaaaca 25770330  T
Q  131 tatt 134  Q
    ||||    
T  25770329 tatt 25770326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 25770694 - 25770804
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    ||||||||||| |||||||||||||||| | || |||||||||||||||||| | ||||||| ||||||||||||||    | ||||| |||| | ||||    
T  25770694 agactaatttttataacggagataaaatataaatattttaaaaacatttaataaaatgtaggaactattcttcaaatgagtgcaaaatgtaaggattaaa 25770793  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  25770794 aacatatttaa 25770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 50732348 - 50732262
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||| || |||||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||| |||||||| ||||||    
T  50732348 attaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaa 50732262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 50780507 - 50780593
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||| || |||||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||||| |||||||| ||||||    
T  50780507 attaacagcagggactaattttgataacggagataaaatgcgaggattttaaaaatatttaatgaaatgtatggactatttttcaaa 50780593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 38485819 - 38485698
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| | |||||||||||||||||||||| ||||||  |  ||||||||||||| |||| | ||||| ||||||||||||||| || |  |||||     
T  38485819 attaacagcaaagactaattttgataacggaga-aaaatgcaaggattttaaaaacatataataaaatgtatggactattcttcaaagaggcacaaaatg 38485721  T
Q  116 taagaactaaaaacatatttaat 138  Q
    |||| ||||||| ||||||||||    
T  38485720 taaggactaaaatcatatttaat 38485698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 27013521 - 27013448
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttca 100  Q
    ||||||||| |||||||||||||||||||| |  |||||||||||||||||| | ||| ||| |||||||||||    
T  27013521 agactaattgtgataacggagataaaatgtaaggattttaaaaacatttaataaaatgcaggaactattcttca 27013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 34743437 - 34743558
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||| | |||||||||||||||||||  | |||||||||||  ||||| |||||||||||||| ||||| |||  ||||||||||  |||| ||| |     
T  34743437 attaaccgcagagactaattttgataacatatataaaatgtgaggatttttaaaacatttaatgaaatgtaaggataattcttcaaagggacgcaaagtg 34743536  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| |||| | ||||||||||    
T  34743537 taaggactagatacatatttaa 34743558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 37172455 - 37172540
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaa 113  Q
    |||||||||||||||  ||||||||||||| | |||||||||||||||||| |  |||||| | |||||||||||  |||||||||    
T  37172455 gactaattttgataatagagataaaatgtggagattttaaaaacatttaataaagtgtaggaattattcttcaaagggacgtaaaa 37172540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 13637587 - 13637478
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||||||||||| ||||||||| |||| |||||||||| ||||||||| ||| |  ||||||| |||||| |  || ||||| |||  | ||||    
T  13637587 agactaattttgataacgaagataaaatatgaagattttaaaaatatttaatgaaatgca-agactattattcaaagaagcgcaaaatgtaaagattaaa 13637489  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  13637488 aacatatttaa 13637478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 45539631 - 45539727
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||| |||| | |||||||| || | || ||||||||||||||    
T  45539631 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattcttaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 45539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 22814597 - 22814669
Alignment:
Q  65 taaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||||| | |||||| |||||| || |  |||||||||| |||||||||||||||||    
T  22814597 taaaaacatttaatgaaatgtatgaactatttttcaaagaggcacaaaatataagtactaaaaacatatttaa 22814669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 26741283 - 26741388
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||| ||||||||||||||  |||||||||||    ||||| |||||  ||||||||||||||  | || ||||  |||| ||| |||    
T  26741283 gactaattttgataacagagataaaatgtgaggattttaaaaac----aatgaaatgtaaagactattcttcaaaggggcgcaaaacgtaaggacttaaa 26741378  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  26741379 acatatttaa 26741388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 54588565 - 54588494
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||||  ||||||| ||||||||   ||||||||||||||||| ||| ||||| |||||||||||||||    
T  54588565 taattttgtaaacggaggtaaaatgtaggaattttaaaaacatttattgaaatgtatggactattcttcaaa 54588494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 132062 - 132112
Alignment:
Q  52 aatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||||||    
T  132062 aatgtgaggattttaaaaacatttaatgaaatgtaaggactattcttcaaa 132112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 45728335 - 45728405
Alignment:
Q  67 aaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||| ||||||||| ||||| |||||||||||||||  |||  ||||| |||| |||||||||||||||||    
T  45728335 aaaatatttaatgaaatgtatggactattcttcaaagggacacaaaatgtaaggactaaaaacatatttaa 45728405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 36899352 - 36899256
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  36899352 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 36899256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 47342824 - 47342748
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaa-tagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| | | ||||||||||||||  ||||| ||| |||||||| || |||||||||||||||||||    
T  47342824 attttaaaaacatttacttaaatgtagggactatttatcaaaatag-cgtaaaatttaggaactaaaaacatatttaa 47342748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 36899697 - 36899772
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | | ||||||||| | || ||||||||||||||    
T  36899697 attttaaaaacatttattgaaatgtagggactattctcaaaattg-cataaaatatagggaccaaaaacatatttaa 36899772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 45539286 - 45539211
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| | |||||||| || | || ||||||||| ||||    
T  45539286 attttaaaaacatttattgaaatgtagggactattcttaaaatcg-cgtaaaatgtagggaccaaaaacataattaa 45539211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 46689759 - 46689684
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | | |||||| || |||| ||||||||||||||    
T  46689759 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cataaaatgtaggaaccaaaaacatatttaa 46689684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 33225599 - 33225490
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||| |||| |||| || ||||||||||   |||||||||||||||| | | ||||||||||||||  |||||    |||||||| ||   |||||||    
T  33225599 gactaaatttggtaacagatataaaatgtggggattttaaaaacatttacttaaatgtagggactatttatcaaaggagcgtaaaatgtagagactaaaa 33225500  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  33225499 acatatttaa 33225490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 42606378 - 42606321
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattct 97  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||    
T  42606378 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattct 42606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 48868599 - 48868640
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  48868599 attttaaaaacatttattgaaatgtagggactattattcaaa 48868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 2389075 - 2389150
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| | | ||||||||||||||||  |||| | | ||||||||| | || ||||||||||||||    
T  2389075 attttaaaaacatttattaaaatgtagggactattctcaaaattg-cataaaatatagggaccaaaaacatatttaa 2389150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 4199898 - 4199934
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  4199898 attttaaaaacatttattgaaatgtagggactattct 4199934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 25770572 - 25770496
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| |||||  ||||||| ||||||   ||| ||||| |||| | |||||||||||||||    
T  25770572 attttaaaaacatttattgaaatgtaaagactatttttcaaaatcacgcaaaatgtaaggattaaaaacatatttaa 25770496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 46690125 - 46690200
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  46690125 attttaaaaacatttattgaaatgtagggattattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 46690200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 6e-32; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 108089 - 108211
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |  ||||||||||  | || |||||     
T  108089 attaacagcagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtaggaataattcttcaaaagggcgcaaaatg 108188  T
Q  116 taagaactaaaaacatatttaat 138  Q
    |||| ||||||||||||||||||    
T  108189 taaggactaaaaacatatttaat 108211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 107833 - 107759
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||| |||||||||||||||||||||||||  |||||||||| ||||| ||| |||||||||||||||||||||    
T  107833 gactatttttgataacggagataaaatgtgaggattttaaaaatatttattgaaatgtagggactattcttcaaa 107759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 107973 - 107897
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||   ||| ||||| || | || ||||||||||||||    
T  107973 attttaaaaacatttattgaaatgtaaggactatttttcaaaatcacggaaaatgtagggaccaaaaacatatttaa 107897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 44803611 - 44803720
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||| ||| |  || ||||| |||| |||||||    
T  44803611 gactaattttgataacggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattctttaaagaagcgcaaaatgtaaggactaaaa 44803710  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  44803711 acatatttaa 44803720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 22948845 - 22948960
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||  ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||  | || |||||     
T  22948845 attaacaatagagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagagactattcttcaaagggtcgcaaaatg 22948944  T
Q  116 taagaactaaaaacat 131  Q
    |||| |||||||||||    
T  22948945 taaggactaaaaacat 22948960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 17075330 - 17075221
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||| |||||| ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||  | || |||||||||| |||||||    
T  17075330 gactaattttgttaacggggataaaatgtgaggattttaaaaacttttaatgaaatgtagggactattcttcaaagcggcgcaaaatataaggactaaaa 17075231  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  17075230 acatatttaa 17075221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 17075596 - 17075705
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||  |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| || || ||||| |||| |||||||    
T  17075596 gactaattttgatagtggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggactattcttcaaagaggcgcaaaatgtaaggactaaaa 17075695  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  17075696 agatatttaa 17075705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 20544034 - 20543913
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| ||| |||||||||||||||||||||||||| |||  |||||||||| ||||||||| |||||||||||||||||||||  | |  |||||     
T  20544034 attaacagcagaaactaattttgataacggagataaaatatgaggattttaaaaaaatttaatgaaatgtagggactattcttcaaaggggcacaaaatg 20543935  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||||| |||||||||||||||    
T  20543934 taagaattaaaaacatatttaa 20543913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 20544290 - 20544399
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||| |||||||||||| ||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||| ||  | |||||||||| |||||||    
T  20544290 gactgattttgataacgaagataaaatgtgaga-ttttaaaaacatttaatgaaatgtaaggactattcttcaaaaaggtgcaaaatataaggactaaaa 20544388  T
Q  128 acatatttaat 138  Q
    |||||||||||    
T  20544389 acatatttaat 20544399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 10466759 - 10466867
Alignment:
Q  29 actaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaa 128  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||| | || ||| |||||||||||||||||||| ||||| |||  | ||||||    
T  10466759 actaattttgataatggagataaaatgtgacgattttaaaaacatttaataaaatatagagactattcttcaaatagacgcaaaatgtaaagattaaaaa 10466858  T
Q  129 catatttaa 137  Q
    |||||||||    
T  10466859 catatttaa 10466867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 32092505 - 32092617
Alignment:
Q  25 agagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaacta 124  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||| |  |||| || |  |  ||||| |||||||||    
T  32092505 agagactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagggacgaaacttcgaagaagcacaaaatgtaagaacta 32092604  T
Q  125 aaaacatatttaa 137  Q
    |||||||||||||    
T  32092605 aaaacatatttaa 32092617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 18152865 - 18152758
Alignment:
Q  30 ctaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaac 129  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||  | |||||||||||||||||||||  | || ||||| |||||||| |||||    
T  18152865 ctaattttgataacggagataaaatgtgaggattttaagaacatttaacaaaatgtagggactattcttcaaaggggcgcaaaatgtaagaactgaaaac 18152766  T
Q  130 atatttaa 137  Q
    ||||||||    
T  18152765 atatttaa 18152758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 32092340 - 32092230
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||||||||||  | | |||||||||  |||||||||||||||||||| ||| ||||||||||||||||| || || ||||| |||| ||||||    
T  32092340 agactaattttgataacaaacacaaaatgtgaggattttaaaaacatttaatgaaatgcagggactattcttcaaagaggcgcaaaatgtaaggactaaa 32092241  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  32092240 aacatatttaa 32092230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 5029733 - 5029841
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||| ||||||||||||||||  |||| ||||||||||||||| || |||||||||||||||||| ||||| ||||| |||  |||||||    
T  5029733 gactaattttgatagcggagataaaatgtgaggattt-aaaaacatttaatgaaatatagggactattcttcaaagagacgcaaaatgtaacgactaaaa 5029831  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  5029832 atatatttaa 5029841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 28852816 - 28852695
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||  |||| |||||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||||| |||| || |||| |||  |||||     
T  28852816 attaacaacagaggctaattttgataacggggataaaatgtgaggattttaaaaacatttaatgaaatgtagggagtattatttaaatggacacaaaatg 28852717  T
Q  116 taagaactaaaaacatatttaa 137  Q
    |||| | |||||||||||||||    
T  28852716 taaggattaaaaacatatttaa 28852695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 42750097 - 42750197
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||| ||||||||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||  | |||||||| |||  |||||||    
T  42750097 gactaattttaataacggagataaaatgtgaggattttaaaaacgtttaatgaaatgtagggactattcttcaaaggggcgtaaaatgtaaagactaaaa 42750196  T
Q  128 a 128  Q
    |    
T  42750197 a 42750197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 28854785 - 28854679
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||| || |||||||||||  |||||||||||||||||| | ||||||||| ||||||| |||| | || |||||||||| | ||||||||    
T  28854785 taattttgataactgaaataaaatgtgaggattttaaaaacatttaataaaatgtagggagtattctttaaatgggcgcaaaatataaggattaaaaaca 28854686  T
Q  131 tatttaa 137  Q
    |||||||    
T  28854685 tatttaa 28854679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 11974776 - 11974666
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||  ||||||| ||||||    || ||||| |||| ||||||    
T  11974776 agactaattttgataacgaagataaaatgtgaggattttaaaaacatttaatgaaatgtacagactatttttcaaaggagcgcaaaatgtaaggactaaa 11974677  T
Q  127 aacatatttaa 137  Q
    | |||||||||    
T  11974676 atcatatttaa 11974666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 28838463 - 28838357
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||  |||||||||  |||  ||||| |||  |||||||    
T  28838463 gactaattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtcgggac--ttcttcaaa-ggacacaaaatgtaaagactaaaa 28838367  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  28838366 acatatttaa 28838357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 11975030 - 11975092
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaat 78  Q
    |||||||  |||||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  11975030 attaacaacagagactaattttgataacggaaataaaatgtgaggattttaaaaacatttaat 11975092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 23548986 - 23549095
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    ||||||||||||||||||| ||||||| |||  |||| ||||| ||||||||| || ||| || |||||||||||  | || ||||| |||||| |||||    
T  23548986 gactaattttgataacggaaataaaatttgaggatttcaaaaagatttaatgaaatatagagagtattcttcaaaagggcgcaaaatgtaagaaataaaa 23549085  T
Q  128 acatatttaa 137  Q
    | ||||||||    
T  23549086 atatatttaa 23549095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 6621113 - 6621200
Alignment:
Q  46 agataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatt 134  Q
    |||||||||||||  ||||||||| |||||||||| |||||||||||||||||||||  | |  ||||| |||||| ||||||||||||    
T  6621113 agataaaatgtgaggattttaaaa-catttaatgaaatgtagggactattcttcaaagggtcacaaaatgtaagaattaaaaacatatt 6621200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 30939576 - 30939652
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||| ||||||||| |||||||||||||||||| ||  | |||||||| || | |||||||||||||||||    
T  30939576 attttaaaaatatttaatgaaatgtagggactattcttcgaaatggcgtaaaatgtagggactaaaaacatatttaa 30939652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 49053858 - 49053966
Alignment:
Q  27 agactaattttgataacggaga-taaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaa 125  Q
    |||||||||||||||| | | | ||||| ||||  ||||||||||| |||||||| ||||||||| |||| |||||| |||| |||||| |||| || ||    
T  49053858 agactaattttgataatgaaaaataaaacgtgaggattttaaaaacttttaatgaaatgtagggattatttttcaaagagacttaaaatgtaaggacgaa 49053957  T
Q  126 aaacatatt 134  Q
    |||||||||    
T  49053958 aaacatatt 49053966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 30938674 - 30938596
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaat 138  Q
    ||||||||||||||||||| | ||||| ||| ||||||| ||| || || ||||| |||| ||||||||||||||||||    
T  30938674 aattttaaaaacatttaataaaatgtatggattattctttaaagaggcgcaaaatgtaaggactaaaaacatatttaat 30938596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 23548719 - 23548670
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacattta 76  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  23548719 agactaattttgataacagagataaaatgtgagtattttaaaaacattta 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 27310125 - 27310049
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||||||| |||||||||| ||||||| ||  | |||||||| || | | |||||||||||||||    
T  27310125 attttaaaaacatttaatgaaatgtagggaccattcttcgaaagggcgtaaaatgtagggaataaaaacatatttaa 27310049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 27311059 - 27311140
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataa----gaactaaaaacatatttaa 137  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| || || ||||| |||    | |||||||||||||||||    
T  27311059 aattttaaaaacatttaatgaaatgtagggactattctttaaagaggcgcaaaatgtaaggagggactaaaaacatatttaa 27311140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 12908492 - 12908389
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||| ||||  ||||||||||||||||||  |||||||||||||||| | | ||||||||| ||||  ||||||   |||||||| || | |||||||    
T  12908492 gactaaatttggaaacggagataaaatgtgaggattttaaaaacatttagttaaatgtagggattatttatcaaatgagcgtaaaatgtagggactaaaa 12908393  T
Q  128 acat 131  Q
    ||||    
T  12908392 acat 12908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 23548119 - 23548056
Alignment:
Q  74 ttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||| ||||||||| ||||||||||| |  || |||||||||| |||||||||||||||||    
T  23548119 ttaatgaaatgtagggattattcttcaaagaagcgcaaaatataaggactaaaaacatatttaa 23548056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 16755624 - 16755720
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| ||||| |||  |||||||||| ||||||||| || ||| ||||||||||||||  | || ||||||| || | |||||||||||||||    
T  16755624 taacggagaaaaaatatgaggattttaaaaatatttaatgaaatatagagactattcttcaaagtggcgcaaaatat-aggattaaaaacatatttaa 16755720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 33847964 - 33847868
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||    |||||||||||||||| ||| |||||| |||||||||  |||| | ||||||||||| | || ||||||||||||||    
T  33847964 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagagactattctcaaaatcg-cgtaaaatatagggaccaaaaacatatttaa 33847868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 18443621 - 18443696
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | || ||||| |||| || ||||||||||||||    
T  18443621 attttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgcaaaatgtaaggaccaaaaacatatttaa 18443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 22954123 - 22954048
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| | | ||||||||||||||||  |||| | | ||||||||| | |||||||||||||||||    
T  22954123 attttaaaaacatttattaaaatgtagggactattctcaaaattg-cataaaatatagggactaaaaacatatttaa 22954048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 33848308 - 33848351
Alignment:
Q  60 aattttaaaaacatttaatgatatgtagggactattcttcaaat 103  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||    
T  33848308 aattttaaaaacatttattgaaatgtagggactattcttaaaat 33848351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 49053592 - 49053518
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaat 103  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||| |  |||| | ||||| | ||||||||||||||    
T  49053592 gactaattttgataacgaagataaaatatgagaattttaaaaa-aaataataaaatgtatgtactattcttcaaat 49053518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 29784033 - 29783976
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattct 97  Q
    ||||||||| |||||||   ||||||||||||||||| ||| || |||||||||||||    
T  29784033 taacggagaaaaaatgtaggaattttaaaaacatttattgaaatatagggactattct 29783976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 4152798 - 4152722
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||| ||| | ||||||||| ||||||| |||    |||||| | || |||||||||||||||||||    
T  4152798 attttaaaaacattcaataaaatgtagggattattctttaaaattgcgtaaactgtaggaactaaaaacatatttaa 4152722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 11992792 - 11992716
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||| ||| | |||||||||| |||||| ||| |  || |||||||||  | |||||||||||||||    
T  11992792 attttaaaaacattaaataaaatgtagggacaattctttaaagatgcgcaaaatataaagattaaaaacatatttaa 11992716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 17157669 - 17157548
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaata 115  Q
    |||||||| || |||||||||||||||  ||||||||||||||  |||||||||| ||||||||| ||||| ||||||||||||||  || ||||||||     
T  17157669 attaacagcagtgactaattttgataatagagataaaatgtgaggattttaaaaatatttaatgaaatgtatggactattcttcaatgaggcgtaaaatg 17157570  T
Q  116 taagaactaaaaacatatttaa 137  Q
    ||||||||||||||||||||||    
T  17157569 taagaactaaaaacatatttaa 17157548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 4510298 - 4510190
Alignment:
Q  30 ctaattttgataacggagataaaatgtgaaa-attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaa 128  Q
    |||||||||||||| |||||||||| || |  |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  4510298 ctaattttgataaccgagataaaatatggaggattttaaaaacatttaatgaaatgtagggactattcttcaaataggcgtaaaatgtaaggactaaaaa 4510199  T
Q  129 catatttaa 137  Q
    |||||||||    
T  4510198 catatttaa 4510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 21113152 - 21113067
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaa 101  Q
    |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  21113152 attaacagcagagactaattttgataaaggagataaaatgtgagaattttaaaaacatttaatgaaatgtagagactattcttcaa 21113067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 7645944 - 7646070
Alignment:
Q  11 agaatattaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgta 110  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||| |||||||||||||||    |  |    
T  7645944 agaaaattaacagcagggactaattttgataacggagataaaatgtgagaatttttaaaacatttattgaaatgtaaggactattcttcaaaggagcaca 7646043  T
Q  111 aaatataagaactaaaaacatatttaa 137  Q
    |||| |||| |||||||||||||||||    
T  7646044 aaatgtaaggactaaaaacatatttaa 7646070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 5974122 - 5974013
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||| |||||||| ||||||||||   |||||||||||||||||||| |||||||||||||||||||||  |  | |||||||||| |||||||    
T  5974122 gactaattttaataacggaaataaaatgtggggattttaaaaacatttaatgaaatgtagggactattcttcaaaggggtgcaaaatataaggactaaaa 5974023  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  5974022 acatatttaa 5974013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 211706 - 211809
Alignment:
Q  35 tttgataacggagataaaatgtgaaaattttaaaaac-atttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatat 133  Q
    |||||||| |||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||||| || ||||| |||| | |||||||||||    
T  211706 tttgataatggagataaaatgtgaagattttaaaaaatatttaatgaaatgtagggactattcttcaaataggcgcaaaatgtaaggattaaaaacatat 211805  T
Q  134 ttaa 137  Q
    ||||    
T  211806 ttaa 211809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 14712973 - 14713103
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaat 114  Q
    |||||||| ||||||||||||||||||| |||||||||| |||  ||||  |||||||||||||| ||||| ||||||||||||||| ||| || |||||    
T  14712973 attaacagcagagactaattttgataacagagataaaatatgagcatttctaaaacatttaatgaaatgtaaggactattcttcaaa-agagcgcaaaat 14713071  T
Q  115 ataagaactaaaaacatatttaattcaaaaat 146  Q
     |||||| ||||||||||||||| | ||||||    
T  14713072 gtaagaattaaaaacatatttaacttaaaaat 14713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 25932352 - 25932476
Alignment:
Q  16 attaacagaagagactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactat---tcttcaaatagacgtaaa 112  Q
    |||||| | |||||||||||||||||||||||||||||||||| |||||||| |||||| || || |||||| ||||||   ||||||||  |  | |||    
T  25932352 attaacggcagagactaattttgataacggagataaaatgtgagaattttaataacattgaacgaaatgtagtgactattaatcttcaaaatggtgcaaa 25932451  T
Q  113 atataagaactaaaaacatatttaa 137  Q
    ||||||| |||||||||||||||||    
T  25932452 atataaggactaaaaacatatttaa 25932476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 8710320 - 8710428
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaa 127  Q
    |||||||||| |||||| | ||||||||||   |||||||||||||||||||| ||||| |||||||||||||||  |  | |||||||||| |||||||    
T  8710320 gactaattttaataacgaa-ataaaatgtggggattttaaaaacatttaatgaaatgtaaggactattcttcaaaggggtgcaaaatataaggactaaaa 8710418  T
Q  128 acatatttaa 137  Q
    ||||||||||    
T  8710419 acatatttaa 8710428  T

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Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 1869559 - 1869453
Alignment:
Q  31 taattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaaca 130  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||  | |||| || |||  |  ||| ||| |||| ||||||||||    
T  1869559 taattttgataacggagataaaatgtgaggattttaaaaacatttaatgaaatgtagaaattattttttaaagtggtgtagaatgtaaggactaaaaaca 1869460  T
Q  131 tatttaa 137  Q
    |||||||    
T  1869459 tatttaa 1869453  T

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Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 211530 - 211443
Alignment:
Q  50 aaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||  ||||||||| |||||||||| ||||| |||||||||||||||  | || ||||| |||| |||||||||||||||||    
T  211530 aaaatgtgaggattttaaaatcatttaatgaaatgtacggactattcttcaaaggggcgcaaaatgtaaggactaaaaacatatttaa 211443  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 20522135 - 20522209
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    |||||||||||  ||||||| ||||||||    |||||||||||||||| ||| |||||||||||||||||||||    
T  20522135 gactaattttgtaaacggaggtaaaatgtagtgattttaaaaacatttattgaaatgtagggactattcttcaaa 20522209  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 17157856 - 17157921
Alignment:
Q  72 atttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||||||||||||||||  | || ||||| |||| |||||||||||||||||    
T  17157856 atttaatgaaatgtagggactattcttcaaagtggcgcaaaatgtaaggactaaaaacatatttaa 17157921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 14257245 - 14257149
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||||    |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  14257245 taacggagaaaaaatgtagggattttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 14257149  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 25932190 - 25932120
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaa 102  Q
    ||||||||||||||||||||||||||||  |  ||||||||||    |||||| ||| |||||||||||||||||    
T  25932190 gactaattttgataacggagataaaatgcaaggattttaaaaa----taatgaaatgcagggactattcttcaaa 25932120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 14257590 - 14257665
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||||||||||  |||| | | ||||||||| | || ||||||||||||||    
T  14257590 attttaaaaacatttattgaaatgtagggactattctcaaaattg-cataaaatatagggaccaaaaacatatttaa 14257665  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 14712908 - 14712832
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||| |||||||| ||||||  |||| ||||| || | || ||||||||||||||    
T  14712908 attttaaaaacatttattgaaatgtaaggactatttttcaaagtgacgcaaaatgtagggaccaaaaacatatttaa 14712832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 5976035 - 5976076
Alignment:
Q  29 actaattttgataacggagataaaatgtgaaaattttaaaaa 70  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  5976035 actaattttgaaaacggagataaaacgtgagaattttaaaaa 5976076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 34984536 - 34984592
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattct 97  Q
    ||||||||| ||||||| |  |||||||||||||||| ||| ||||||||||||||||    
T  34984536 taacggagaaaaaatgt-aggattttaaaaacatttattgaaatgtagggactattct 34984592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 5975909 - 5975834
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| | | ||||||| ||||||||||||| ||  | ||||| | || |||||||||||||||||    
T  5975909 attttaaaaacatttattaaaatgtagg-actattcttcaaagaggtggaaaatgtgaggactaaaaacatatttaa 5975834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 14712767 - 14712661
Alignment:
Q  29 actaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaa 128  Q
    ||||||||| |||||| | ||||||| | |  |||| ||||||||||||| | || |||| | ||||||||||| || |||||||| |||| ||| ||||    
T  14712767 actaatttttataacgcatataaaatataaggatttaaaaaacatttaataaaatatagg-attattcttcaaagaggcgtaaaatgtaaggact-aaaa 14712670  T
Q  129 catatttaa 137  Q
    |||||||||    
T  14712669 catatttaa 14712661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 15147795 - 15147720
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  15147795 attttaaaaacatttattgaaatgtagggattattctctaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 15147720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 15148161 - 15148236
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||| |||||| ||| |||||||||||||| |  |||| | ||||||||||| | || ||||||||||||||    
T  15148161 attttaaaatcatttattgaaatgtagggactattatcaaaattg-cgtaaaatatagggaccaaaaacatatttaa 15148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 19595661 - 19595737
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||| ||||| ||| ||||||||||||||||| ||| ||  | ||||| || | ||||| |||||||||||    
T  19595661 attttaaaaatatttattgaaatgtagggactattctttaaaaaggtgcaaaatgtatggactaataacatatttaa 19595737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 97
Target Start/End: Complemental strand, 20824241 - 20824205
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattct 97  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  20824241 attttaaaaacatttattgaaatgtagggactattct 20824205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 20824607 - 20824682
Alignment:
Q  61 attttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    |||||||||||||||| ||| ||||||||| ||||||  |||| | |||||||| || | || ||||||||||||||    
T  20824607 attttaaaaacatttattgaaatgtagggattattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 20824682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 603 - 493
Alignment:
Q  27 agactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaa 126  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||| | || | || ||||||   || ||||| |||||||||||    
T  603 agactaattttgataacaaaaataaaatgtgaaaattttaaaaacatttaatgaaatgtaagaacaactcgtcaaatgatcgcaaaatctaagaactaaa 504  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  503 aacatatttaa 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 39843 - 39939
Alignment:
Q  40 taacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaatagacgtaaaatataagaactaaaaacatatttaa 137  Q
    ||||||||  ||||||| |  |||||||||||||||| ||| ||||||||||||||||  |||| | |||||||| || | || ||||||||||||||    
T  39843 taacggaggaaaaatgtaaggattttaaaaacatttattgaaatgtagggactattctcaaaatcg-cgtaaaatgtagggaccaaaaacatatttaa 39939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 25821 - 25930
Alignment:
Q  28 gactaattttgataacggagataaaatgtgaaaattttaaaaacatttaatgatatgtagggactattcttcaaataga-cgtaaaatataagaactaaa 126  Q
    |||||| |||| |||||||  |||||||| | || |||||||| ||||| | | ||||||||||||||  ||||| ||| |||||||| || | ||||||    
T  25821 gactaaatttggtaacggaagtaaaatgtaagaactttaaaaatatttacttaaatgtagggactatttatcaaa-agagcgtaaaatgtagggactaaa 25919  T
Q  127 aacatatttaa 137  Q
    |||||||||||    
T  25920 aacatatttaa 25930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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