View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20376_high_3 (Length: 689)

Name: NF20376_high_3
Description: NF20376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20376_high_3
NF20376_high_3
[»] chr4 (55 HSPs)
chr4 (12-672)||(42684591-42685252)
chr4 (394-470)||(400566-400642)
chr4 (395-454)||(12869046-12869105)
chr4 (394-473)||(22845445-22845524)
chr4 (386-445)||(35609737-35609796)
chr4 (394-445)||(52559574-52559625)
chr4 (394-472)||(6218446-6218524)
chr4 (394-472)||(34358029-34358107)
chr4 (360-445)||(35609516-35609601)
chr4 (387-472)||(50859008-50859092)
chr4 (368-472)||(50828207-50828311)
chr4 (395-470)||(5846154-5846229)
chr4 (394-445)||(9279234-9279285)
chr4 (395-470)||(14783188-14783263)
chr4 (395-470)||(21498803-21498878)
chr4 (397-472)||(22231307-22231382)
chr4 (394-473)||(22863481-22863560)
chr4 (394-445)||(28245552-28245603)
chr4 (394-445)||(28246111-28246162)
chr4 (394-473)||(35788901-35788980)
chr4 (387-445)||(7572728-7572786)
chr4 (394-472)||(11036510-11036588)
chr4 (380-438)||(13555500-13555558)
chr4 (394-472)||(22827545-22827623)
chr4 (394-472)||(35788666-35788744)
chr4 (394-472)||(39902562-39902640)
chr4 (394-472)||(50543566-50543644)
chr4 (395-440)||(21498362-21498407)
chr4 (394-439)||(22822357-22822402)
chr4 (388-445)||(25324059-25324116)
chr4 (392-445)||(27464274-27464327)
chr4 (394-439)||(35796774-35796819)
chr4 (360-445)||(44118885-44118970)
chr4 (395-438)||(5846387-5846430)
chr4 (395-470)||(9685640-9685715)
chr4 (394-445)||(22231099-22231150)
chr4 (395-470)||(25052860-25052935)
chr4 (395-445)||(1518172-1518222)
chr4 (395-445)||(6218212-6218262)
chr4 (387-445)||(6666226-6666284)
chr4 (396-438)||(17222685-17222727)
chr4 (389-439)||(21646297-21646347)
chr4 (394-472)||(21685005-21685083)
chr4 (387-445)||(25323824-25323882)
chr4 (400-438)||(40726734-40726772)
chr4 (394-472)||(50543329-50543407)
chr4 (395-445)||(53814955-53815005)
chr4 (379-440)||(6666666-6666727)
chr4 (395-440)||(20821981-20822026)
chr4 (395-472)||(40717440-40717517)
chr4 (395-440)||(53814705-53814750)
chr4 (394-438)||(2221001-2221045)
chr4 (395-439)||(12005501-12005545)
chr4 (389-437)||(21041353-21041401)
chr4 (394-438)||(27634549-27634593)
[»] chr5 (37 HSPs)
chr5 (360-463)||(7369697-7369800)
chr5 (394-473)||(17352433-17352512)
chr5 (394-472)||(18333464-18333542)
chr5 (394-472)||(24346500-24346578)
chr5 (379-447)||(25436193-25436261)
chr5 (394-453)||(37782068-37782127)
chr5 (394-473)||(41666755-41666834)
chr5 (387-473)||(60087-60173)
chr5 (394-472)||(41666992-41667070)
chr5 (394-472)||(15480564-15480644)
chr5 (394-438)||(12034697-12034741)
chr5 (360-439)||(170583-170662)
chr5 (394-445)||(24528547-24528598)
chr5 (394-472)||(24269870-24269947)
chr5 (360-445)||(7092123-7092207)
chr5 (394-471)||(9368602-9368679)
chr5 (395-439)||(24487677-24487721)
chr5 (394-472)||(18333698-18333777)
chr5 (394-473)||(19705910-19705989)
chr5 (394-445)||(24531606-24531657)
chr5 (394-445)||(24647703-24647754)
chr5 (405-472)||(25258093-25258160)
chr5 (405-472)||(25321883-25321950)
chr5 (395-470)||(27132994-27133069)
chr5 (395-470)||(42295587-42295662)
chr5 (394-440)||(15480329-15480375)
chr5 (395-445)||(19522095-19522145)
chr5 (379-445)||(37405081-37405147)
chr5 (394-439)||(2061970-2062015)
chr5 (394-435)||(6637609-6637650)
chr5 (395-440)||(26137140-26137185)
chr5 (397-470)||(29909722-29909795)
chr5 (418-470)||(8287832-8287884)
chr5 (387-439)||(12151943-12151995)
chr5 (397-445)||(24270131-24270179)
chr5 (397-445)||(24346763-24346811)
chr5 (395-439)||(33337270-33337314)
[»] chr8 (52 HSPs)
chr8 (379-472)||(38475739-38475832)
chr8 (366-427)||(8466532-8466593)
chr8 (395-470)||(17469826-17469901)
chr8 (395-470)||(17477073-17477148)
chr8 (394-445)||(24532447-24532498)
chr8 (395-469)||(4828301-4828375)
chr8 (387-445)||(38476277-38476335)
chr8 (360-453)||(42049705-42049798)
chr8 (395-438)||(7267498-7267541)
chr8 (395-470)||(19256587-19256662)
chr8 (395-470)||(24075307-24075382)
chr8 (394-445)||(38447453-38447504)
chr8 (394-445)||(39052955-39053006)
chr8 (394-440)||(5931980-5932026)
chr8 (387-445)||(10614965-10615023)
chr8 (394-472)||(11232193-11232271)
chr8 (394-472)||(11232428-11232506)
chr8 (394-472)||(15042669-15042747)
chr8 (394-472)||(35682780-35682858)
chr8 (387-441)||(37868378-37868432)
chr8 (360-445)||(8466750-8466835)
chr8 (394-471)||(8929024-8929101)
chr8 (392-445)||(37001231-37001284)
chr8 (387-440)||(37868614-37868667)
chr8 (394-438)||(7729948-7729992)
chr8 (221-290)||(33503697-33503768)
chr8 (392-472)||(37001469-37001549)
chr8 (394-473)||(10450007-10450086)
chr8 (395-470)||(19256821-19256896)
chr8 (398-473)||(27205171-27205246)
chr8 (406-473)||(39960211-39960278)
chr8 (387-438)||(44931215-44931266)
chr8 (395-445)||(4828076-4828126)
chr8 (360-470)||(5590369-5590479)
chr8 (360-438)||(5940031-5940109)
chr8 (387-440)||(6541914-6541968)
chr8 (366-472)||(20301240-20301346)
chr8 (366-472)||(21087872-21087978)
chr8 (399-469)||(26800514-26800584)
chr8 (398-472)||(27204975-27205049)
chr8 (398-472)||(27205073-27205147)
chr8 (395-445)||(34843125-34843175)
chr8 (387-441)||(37867862-37867916)
chr8 (387-441)||(37868102-37868156)
chr8 (395-445)||(39984822-39984872)
chr8 (395-472)||(42846604-42846682)
chr8 (417-470)||(4963384-4963437)
chr8 (360-437)||(12022422-12022499)
chr8 (392-445)||(22638205-22638258)
chr8 (387-440)||(40014658-40014711)
chr8 (395-439)||(6559481-6559525)
chr8 (396-440)||(30201555-30201599)
[»] chr1 (31 HSPs)
chr1 (360-439)||(52676305-52676384)
chr1 (366-472)||(31181512-31181618)
chr1 (361-445)||(52907358-52907442)
chr1 (387-472)||(50695833-50695918)
chr1 (394-472)||(4113005-4113083)
chr1 (394-440)||(26173255-26173301)
chr1 (394-472)||(40079159-40079237)
chr1 (397-473)||(26865356-26865432)
chr1 (395-470)||(3169774-3169849)
chr1 (394-473)||(52650769-52650848)
chr1 (395-445)||(12244988-12245038)
chr1 (397-470)||(17452680-17452753)
chr1 (395-440)||(41035858-41035903)
chr1 (360-440)||(4098433-4098513)
chr1 (387-435)||(7465681-7465729)
chr1 (397-445)||(17452854-17452902)
chr1 (223-306)||(34688645-34688728)
chr1 (223-306)||(34693173-34693256)
chr1 (380-440)||(38668353-38668413)
chr1 (360-436)||(43480346-43480422)
chr1 (394-445)||(25713400-25713451)
chr1 (387-438)||(31004470-31004521)
chr1 (394-445)||(39348378-39348429)
chr1 (395-470)||(51589000-51589075)
chr1 (360-438)||(9146587-9146665)
chr1 (394-440)||(16163174-16163220)
chr1 (406-472)||(31432229-31432295)
chr1 (394-472)||(35772271-35772349)
chr1 (395-445)||(51589234-51589284)
chr1 (394-439)||(2859659-2859704)
chr1 (387-472)||(9146863-9146948)
[»] chr6 (31 HSPs)
chr6 (395-470)||(27656466-27656541)
chr6 (360-472)||(33494512-33494624)
chr6 (366-445)||(6542969-6543048)
chr6 (394-472)||(4868576-4868654)
chr6 (394-472)||(4868812-4868890)
chr6 (394-472)||(9705027-9705105)
chr6 (395-470)||(8026397-8026472)
chr6 (394-445)||(9705261-9705312)
chr6 (395-470)||(21690730-21690805)
chr6 (394-472)||(13353208-13353286)
chr6 (395-445)||(19712722-19712772)
chr6 (395-445)||(27772722-27772772)
chr6 (394-472)||(33796333-33796411)
chr6 (395-472)||(11721913-11721990)
chr6 (237-306)||(20848611-20848680)
chr6 (397-470)||(24554127-24554200)
chr6 (395-440)||(27653225-27653270)
chr6 (397-445)||(28867983-28868031)
chr6 (394-445)||(2753265-2753316)
chr6 (397-440)||(17147691-17147734)
chr6 (360-471)||(30256551-30256662)
chr6 (395-473)||(13740924-13741002)
chr6 (395-473)||(13746424-13746502)
chr6 (395-445)||(25065120-25065170)
chr6 (394-439)||(3680253-3680298)
chr6 (395-440)||(6400877-6400922)
chr6 (405-470)||(8026622-8026687)
chr6 (394-439)||(12330211-12330256)
chr6 (395-440)||(19712960-19713005)
chr6 (395-440)||(27772954-27772999)
chr6 (395-439)||(12199837-12199881)
[»] chr3 (47 HSPs)
chr3 (394-472)||(35038193-35038271)
chr3 (394-472)||(54567899-54567977)
chr3 (368-445)||(23610397-23610474)
chr3 (394-470)||(13574922-13574998)
chr3 (367-438)||(34221740-34221811)
chr3 (394-440)||(50083112-50083158)
chr3 (395-472)||(1723075-1723152)
chr3 (395-472)||(8018976-8019053)
chr3 (395-470)||(11589793-11589868)
chr3 (394-445)||(45138828-45138879)
chr3 (394-472)||(4155331-4155409)
chr3 (398-472)||(7697397-7697471)
chr3 (394-472)||(16926948-16927026)
chr3 (395-445)||(20327875-20327925)
chr3 (394-472)||(31317473-31317551)
chr3 (360-437)||(39269304-39269381)
chr3 (360-445)||(45828219-45828304)
chr3 (397-445)||(20327640-20327688)
chr3 (395-439)||(20479016-20479060)
chr3 (360-472)||(22729073-22729185)
chr3 (395-439)||(23691224-23691268)
chr3 (395-439)||(23708024-23708068)
chr3 (395-439)||(23708256-23708300)
chr3 (395-439)||(23726480-23726524)
chr3 (395-439)||(23726712-23726756)
chr3 (395-439)||(23744936-23744980)
chr3 (395-439)||(23745168-23745212)
chr3 (395-439)||(24063461-24063505)
chr3 (395-439)||(24063693-24063737)
chr3 (394-445)||(472086-472137)
chr3 (372-439)||(1681690-1681757)
chr3 (394-445)||(45138997-45139048)
chr3 (394-445)||(54368523-54368574)
chr3 (395-445)||(9272969-9273019)
chr3 (394-440)||(16239598-16239644)
chr3 (395-472)||(16239835-16239912)
chr3 (394-472)||(31317236-31317313)
chr3 (221-285)||(10274553-10274618)
chr3 (395-472)||(45828027-45828104)
chr3 (397-445)||(1800225-1800273)
chr3 (397-457)||(20303078-20303138)
chr3 (357-445)||(22775424-22775512)
chr3 (395-439)||(23691456-23691500)
chr3 (412-472)||(24866222-24866282)
chr3 (412-440)||(28087246-28087274)
chr3 (360-436)||(41915144-41915220)
chr3 (389-445)||(50930704-50930760)
[»] chr2 (43 HSPs)
chr2 (394-473)||(16419509-16419588)
chr2 (394-473)||(40379207-40379286)
chr2 (395-457)||(2324482-2324544)
chr2 (360-438)||(8227322-8227400)
chr2 (394-472)||(36352158-36352236)
chr2 (394-472)||(40379443-40379521)
chr2 (395-472)||(28407792-28407869)
chr2 (394-445)||(37840344-37840395)
chr2 (395-445)||(2324248-2324298)
chr2 (394-472)||(5711438-5711516)
chr2 (394-472)||(5711674-5711752)
chr2 (397-439)||(15988223-15988265)
chr2 (394-440)||(17525369-17525415)
chr2 (394-472)||(17719407-17719485)
chr2 (395-445)||(32884115-32884165)
chr2 (394-444)||(33606316-33606366)
chr2 (373-445)||(25082563-25082635)
chr2 (387-439)||(30006611-30006663)
chr2 (387-439)||(30063299-30063351)
chr2 (394-445)||(2029776-2029827)
chr2 (394-445)||(2030011-2030062)
chr2 (395-470)||(19191611-19191686)
chr2 (394-445)||(42639640-42639691)
chr2 (395-445)||(5509087-5509137)
chr2 (394-472)||(14466409-14466487)
chr2 (395-445)||(17854955-17855005)
chr2 (394-440)||(19544402-19544447)
chr2 (395-445)||(29718336-29718386)
chr2 (395-445)||(37769969-37770019)
chr2 (395-445)||(40718233-40718283)
chr2 (398-439)||(93479-93520)
chr2 (398-439)||(93752-93793)
chr2 (394-439)||(94052-94097)
chr2 (395-440)||(5509321-5509366)
chr2 (397-470)||(8424898-8424971)
chr2 (394-439)||(16533554-16533599)
chr2 (396-473)||(17719575-17719652)
chr2 (395-440)||(17854723-17854768)
chr2 (374-435)||(18208975-18209036)
chr2 (214-290)||(37527034-37527111)
chr2 (412-472)||(10570995-10571055)
chr2 (360-440)||(15988386-15988465)
chr2 (360-440)||(33606085-33606165)
[»] scaffold0334 (1 HSPs)
scaffold0334 (395-457)||(4443-4505)
[»] chr7 (36 HSPs)
chr7 (394-472)||(25620143-25620221)
chr7 (395-472)||(21054952-21055029)
chr7 (387-472)||(40898921-40899006)
chr7 (366-463)||(47849550-47849647)
chr7 (395-439)||(23839109-23839153)
chr7 (395-470)||(26562074-26562149)
chr7 (395-470)||(34027401-34027476)
chr7 (394-445)||(48243087-48243138)
chr7 (380-438)||(9689123-9689181)
chr7 (394-472)||(47710450-47710528)
chr7 (394-472)||(47722106-47722184)
chr7 (360-445)||(1793721-1793804)
chr7 (395-440)||(10882036-10882081)
chr7 (395-472)||(34027635-34027712)
chr7 (394-470)||(29469612-29469688)
chr7 (394-470)||(29469847-29469923)
chr7 (392-472)||(30727117-30727197)
chr7 (394-445)||(3038110-3038161)
chr7 (387-454)||(21213058-21213125)
chr7 (405-472)||(32474518-32474585)
chr7 (397-472)||(33996310-33996385)
chr7 (395-445)||(2544473-2544523)
chr7 (395-445)||(10903093-10903143)
chr7 (366-472)||(15317532-15317637)
chr7 (395-457)||(23794370-23794432)
chr7 (232-294)||(24416812-24416874)
chr7 (394-472)||(26239915-26239993)
chr7 (387-445)||(32292519-32292577)
chr7 (394-472)||(43085536-43085614)
chr7 (395-436)||(4268062-4268103)
chr7 (383-440)||(38843024-38843081)
chr7 (394-438)||(4454783-4454827)
chr7 (395-435)||(4886337-4886377)
chr7 (394-438)||(35308179-35308223)
chr7 (395-439)||(40746506-40746550)
chr7 (394-438)||(44874379-44874423)
[»] scaffold0041 (1 HSPs)
scaffold0041 (387-472)||(67278-67363)
[»] scaffold0129 (1 HSPs)
scaffold0129 (394-445)||(14310-14361)
[»] scaffold0005 (1 HSPs)
scaffold0005 (395-470)||(56467-56542)
[»] scaffold0519 (2 HSPs)
scaffold0519 (394-472)||(1923-2001)
scaffold0519 (394-472)||(2158-2236)
[»] scaffold0083 (1 HSPs)
scaffold0083 (394-472)||(51243-51321)
[»] scaffold0003 (1 HSPs)
scaffold0003 (387-445)||(347597-347655)
[»] scaffold0766 (1 HSPs)
scaffold0766 (394-445)||(6281-6332)
[»] scaffold0048 (1 HSPs)
scaffold0048 (394-473)||(82083-82162)
[»] scaffold0692 (2 HSPs)
scaffold0692 (394-472)||(5543-5621)
scaffold0692 (394-472)||(5753-5831)
[»] scaffold0481 (1 HSPs)
scaffold0481 (395-445)||(3497-3547)
[»] scaffold0400 (1 HSPs)
scaffold0400 (406-470)||(3864-3928)
[»] scaffold0365 (1 HSPs)
scaffold0365 (406-470)||(4508-4572)


Alignment Details
Target: chr4 (Bit Score: 581; Significance: 0; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 581; E-Value: 0
Query Start/End: Original strand, 12 - 672
Target Start/End: Complemental strand, 42685252 - 42684591
Alignment:
Q  12 cagagataagagagtagaggaacaaaaacactaatataatactattatttcccagtttggcttaaactgaccttcgtctgcggggagaatagctctccaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  42685252 cagagataagagagtagaggaacaaaaacactaatataatactattatttcccagtttgccttaaattgaccttcgtctgcggggagaatagctctccaa 42685153  T
Q  112 accactacgagtgagtccttacaggggatgtaaagaggctacaagtaattaacttcaacgataaaccataatttccacccttttctcaagtctatcttag 211  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42685152 accactacgagtgagtccttacagggaatgtaaagaggttacaagtaattaacttcaacgataaaccataatttccacccttttctcaagtctatcttag 42685053  T
Q  212 tccacaacaagatcctaagaaaatcaagagagaaagcttaaattcttcctctgatgagatctcactatccaaggcgtttaaaatgtttttctcaaaccct 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  42685052 tccacaacaagatcctaagaaaatcaagagagaaagcttaaattcttcctctaatgagatctcactatccaaggtgtttgaaatgtttttctcaaaccct 42684953  T
Q  312 agaacctcacccaagagctctcgacactcaaaaccctagcctttgtaggagtcacacattggataacagatggtttgaacaagtgtttataaatggggga 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  42684952 agaacctcacccaagagctctcgacactcaaaaccctagcctttgtaggagtcacacattggataacaaatggtttgaacaagtgtttataaatgggggc 42684853  T
Q  412 aatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagagccttttcgtgttccctctctctaagattccattttgcg 511  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42684852 aatcatcacctcacaagccggttttgtggcgttgagttaggctcaagcacaagttctaagagccttttcgtgttccctctctctaagattccattttgcg 42684753  T
Q  512 agttgttacaaatgctatcaaaaaacaactatttacaggtaaaattacactgcacaacccgagtcaacttgatttgaattatgtatagccatgactcgaa 611  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  42684752 agttgttacaaatgctatcaaaaaacaactatttataggtaaaattacactgcacaactcgagtcaacttgatttgaattatgcatagccatgactcgaa 42684653  T
Q  612 tcatgcactttcac-nnnnnnntagtttatacacttatgctataagcttccaattgagctgt 672  Q
    ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||    
T  42684652 tcatgcactttcacaaaaaaaatagtttatacacttatgctataagcttccaattgagctgt 42684591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 400642 - 400566
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||  |||| | || |||||| ||||| ||||||    
T  400642 gtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaagctcaaccacaatttctaa 400566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 395 - 454
Target Start/End: Complemental strand, 12869105 - 12869046
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggct 454  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| |||| | ||||||    
T  12869105 tgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggct 12869046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 22845524 - 22845445
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  22845524 gtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 22845445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 35609796 - 35609737
Alignment:
Q  386 ttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||||||||||| |||||  |||| |||||||||||||||||||||||| ||||    
T  35609796 ttgaacaagtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttg 35609737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 52559574 - 52559625
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  52559574 gtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttg 52559625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 6218446 - 6218524
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||  ||| | ||||||||| ||| | ||||||||    
T  6218446 gtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaaccacgatttctaaga 6218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 34358107 - 34358029
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||||||||||| |||| |||| ||| ||||||||||||||| |||| | ||||||||| ||| | ||||||||    
T  34358107 gtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaaga 34358029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 35609601 - 35609516
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| ||||||||||   ||||||  | ||||||||||||||| |||||| |||| |||||||||||| ||||||||||| ||||    
T  35609601 gagtcccacattggatgggagatggcctaaacaagtgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttg 35609516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 50859008 - 50859092
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||| |||||||||||| |||| |||||| |||||||||||||||| ||||||| |||| | ||||| ||| ||||||| ||||||    
T  50859008 tgaataagtgtttataagtgggtgaaatcctcacctcacaagccgg-tttgtggggttgtgctaggcacaatcacaagtactaaga 50859092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 472
Target Start/End: Complemental strand, 50828311 - 50828207
Alignment:
Q  368 cattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttc 467  Q
    |||||||| | ||||||  | ||||||||||||||| |||| | | ||||||||||||| ||||||||||||| | || | ||||| ||| ||||| |||    
T  50828311 cattggatgagagatggcctaaacaagtgtttataagtgggagtagtcatcacctcacaggccggttttgtggggctgtgttaggcccaaacacaaattc 50828212  T
Q  468 taaga 472  Q
    |||||    
T  50828211 taaga 50828207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 5846154 - 5846229
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||| |||| | ||||||||| ||| | ||||||    
T  5846154 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaa 5846229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 9279234 - 9279285
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||| ||||    
T  9279234 gtgtttataagtgggggcaatcatcacctcactagccggttttgtggggttg 9279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 14783263 - 14783188
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  14783263 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 14783188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 21498803 - 21498878
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  21498803 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 22231382 - 22231307
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  22231382 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22231307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 22863481 - 22863560
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| ||||| |||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  22863481 gtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 22863560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 28245603 - 28245552
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  28245603 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 28245552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 28246162 - 28246111
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  28246162 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 28246111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 35788901 - 35788980
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| ||| |||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  35788901 gtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 35788980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 7572786 - 7572728
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||||||||||| |||||| |||| |||||||||||||| | ||||||| ||||    
T  7572786 tgaacaagtgtttataagtgggggtaatcttcacctcacaagccagctttgtggggttg 7572728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 11036588 - 11036510
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| | |||| |||||||||||||||||||||||||| || |||| | ||| | ||| ||||| ||||||||    
T  11036588 gtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaaga 11036510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 13555558 - 13555500
Alignment:
Q  380 gatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    ||||||||||  | ||| |||||| ||||||||||| ||||||||||||||||||||||    
T  13555558 gatggtttgacaatgtgcttataagtgggggaaatcctcacctcacaagccggttttgt 13555500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 22827545 - 22827623
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||| | |||| | ||||| ||| ||| | ||||||||    
T  22827545 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 35788666 - 35788744
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||| ||| |||| | ||||| ||| ||| | ||||||||    
T  35788666 gtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaaga 35788744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 39902640 - 39902562
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| ||||||||||||| |||||||||| |||| | ||||| ||| ||| | ||||||||    
T  39902640 gtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 50543644 - 50543566
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||| ||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  50543644 gtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaaga 50543566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 21498362 - 21498407
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||    
T  21498362 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgg 21498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 22822357 - 22822402
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||    
T  22822357 gtgtttataagtgggggaaatcctcaccacacaagccggttttgtg 22822402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 25324116 - 25324059
Alignment:
Q  388 gaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||||||||| |||||| ||| ||||||||||||| || |||||||| ||||    
T  25324116 gaacaagtgtttataagtgggggcaattatcacctcacaagtcgattttgtggggttg 25324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 27464327 - 27464274
Alignment:
Q  392 aagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||||| ||| || |||| |||||||||||||||||||||||| ||||    
T  27464327 aagtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttg 27464274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 439
Target Start/End: Complemental strand, 35796819 - 35796774
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||    
T  35796819 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtg 35796774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 44118970 - 44118885
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| ||||| |||||| ||||||  |||  | |||||||||| |||||| |||| |||||||||||||| ||||||||| ||||    
T  44118970 gagtcccacatcggataagagatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagcccgttttgtggggttg 44118885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 438
Target Start/End: Original strand, 5846387 - 5846430
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||    
T  5846387 tgtttataagtgggggcaatcctcacctcacaagccggttttgt 5846430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 9685640 - 9685715
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||| ||| |||| | ||||| ||| ||| | ||||||    
T  9685640 tgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 22231150 - 22231099
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||  |||| |||||||||||||||||||||||| ||||    
T  22231150 gtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttg 22231099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 25052860 - 25052935
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| ||||  ||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  25052860 tgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 1518172 - 1518222
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| ||| |||||||||||||||||||| ||||    
T  1518172 tgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttg 1518222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 6218212 - 6218262
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||||| ||||    
T  6218212 tgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttg 6218262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 6666284 - 6666226
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||| |||||||||||| |||||| |||| ||||||||||| | |||||||||| ||||    
T  6666284 tgaataagtgtttataattgggggcaatcctcacctcacaaacaggttttgtggggttg 6666226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 396 - 438
Target Start/End: Complemental strand, 17222727 - 17222685
Alignment:
Q  396 gtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||| |||||| |||| ||||||||||||||||||||||    
T  17222727 gtttataagtgggggcaatcctcacctcacaagccggttttgt 17222685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 439
Target Start/End: Complemental strand, 21646347 - 21646297
Alignment:
Q  389 aacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||| ||||||||||||||||| |||| |||||| ||||||| ||||||||    
T  21646347 aacatgtgtttataaatgggggcaatcctcaccttacaagccagttttgtg 21646297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 21685005 - 21685083
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||  ||||| ||||||||||||||| |||||||| |||| | || || ||| ||||| ||||||||    
T  21685005 gtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagcccaaccacaatttctaaga 21685083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 25323882 - 25323824
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||||||||||  |||||| |||| ||||||| || ||||||||||||| ||||    
T  25323882 tgaacaagtgtttatacgtgggggcaatcctcacctcgcaggccggttttgtggggttg 25323824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 438
Target Start/End: Original strand, 40726734 - 40726772
Alignment:
Q  400 ataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  40726734 ataagtgggggaaatcctcacctcacaagccggttttgt 40726772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 50543407 - 50543329
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||| ||||| |||||| |||| ||||| |||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  50543407 gtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 50543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 53815005 - 53814955
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||||| ||||    
T  53815005 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttg 53814955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 440
Target Start/End: Complemental strand, 6666727 - 6666666
Alignment:
Q  379 agatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||| |||||||||||||  || |||||| |||| | ||||||||| ||||||||||||    
T  6666727 agatggtctgaacaagtgttttcaagtgggggcaatccttacctcacaaaccggttttgtgg 6666666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 20821981 - 20822026
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||    
T  20821981 tgtttataagtgggggcaattctcacctcacaagccggttttgtgg 20822026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 40717517 - 40717440
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| |||| |||||||| ||| ||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  40717517 tgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaaga 40717440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 53814750 - 53814705
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||  |||| ||||||||||||||||||||||||    
T  53814750 tgtttataagtggggataatcctcacctcacaagccggttttgtgg 53814705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 2221045 - 2221001
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||  |||||| |||| ||||||||||||||||||||||    
T  2221045 gtgtttataggtgggggcaatcctcacctcacaagccggttttgt 2221001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 12005545 - 12005501
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||| |||| |||||| |||| |||||||||||||||||||||||    
T  12005545 tgttaataagtgggggcaatcctcacctcacaagccggttttgtg 12005501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 21041353 - 21041401
Alignment:
Q  389 aacaagtgtttataaatgggggaaatcatcacctcacaagccggttttg 437  Q
    |||| |||||||||| ||||| ||||| ||||||||||| |||||||||    
T  21041353 aacatgtgtttataagtggggaaaatcctcacctcacaaaccggttttg 21041401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 27634593 - 27634549
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||| | |||||| |||| ||||||||||||||||||||||    
T  27634593 gtgtttatgagtgggggcaatcctcacctcacaagccggttttgt 27634549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 463
Target Start/End: Original strand, 7369697 - 7369800
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagc 459  Q
    ||||| |||||||||||| ||||||  ||||||||||||||||| |||||| | || |||||||||||||||||||||||| |||| | ||||| ||| |    
T  7369697 gagtcccacattggataagagatggcatgaacaagtgtttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgttaggcccaacc 7369796  T
Q  460 acaa 463  Q
    ||||    
T  7369797 acaa 7369800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 17352512 - 17352433
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||  |||| | ||||||||| ||| | |||||||||    
T  17352512 gtgtttataagtgggggcaatcatcacctcacaagccggttttgtgaggttgcgttaggctcaaccaccacttctaagag 17352433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 18333542 - 18333464
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||||| ||||||||    
T  18333542 gtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 24346578 - 24346500
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||| ||| |||| | ||||||||| ||||| ||||||||    
T  24346578 gtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaaga 24346500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 25436193 - 25436261
Alignment:
Q  379 agatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgag 447  Q
    |||||| ||||||| |||||||||| |  |||||||| |||||||||||||||||||||||| ||||||    
T  25436193 agatggcttgaacatgtgtttataagtaagggaaatcctcacctcacaagccggttttgtggggttgag 25436261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 453
Target Start/End: Complemental strand, 37782127 - 37782068
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggc 453  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||| |||||| |||||    
T  37782127 gtgtttataagtgggggcaatcatcacctcacaagctggttttgtggagttgagttaggc 37782068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 41666834 - 41666755
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  41666834 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 41666755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 473
Target Start/End: Original strand, 60087 - 60173
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||| |||||||||| |||||| |||| |||||||||||||||||||||||| |||  | ||| | ||| ||||| |||||||||    
T  60087 tgaacatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaagag 60173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 41667070 - 41666992
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  41667070 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 15480564 - 15480644
Alignment:
Q  394 gtgtttataaatggggga--aatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||||  |||| |||||||||||||||||||||||| |||| | ||||| ||| ||||| ||||||||    
T  15480564 gtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaaga 15480644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 12034697 - 12034741
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||||||||||||||| |||||||||||||| |||||||    
T  12034697 gtgtttataaatgggggaaatcctcacctcacaagccagttttgt 12034741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 170662 - 170583
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||||| ||| || ||||||| | | || |||||||||| |||||| | || |||||||||||||||||||||||    
T  170662 gagtcacacatcggacaaaagatggtctaagcatgtgtttataagtgggggcagtcctcacctcacaagccggttttgtg 170583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 24528547 - 24528598
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  24528547 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 24528598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 24269947 - 24269870
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||| || || |||||||||||||||||||| ||| |||| | ||||||||| ||||| ||||||||    
T  24269947 gtgtttataagtggggtaa-tcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaaga 24269870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 7092123 - 7092207
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| |||||||||||||||||||   ||||| ||||||| |  |||||| |||| |||||||||||||| ||||||||| ||||    
T  7092123 gagtcccacattggataacagatggcccgaacatgtgtttagag-tgggggcaatcctcacctcacaagccagttttgtggggttg 7092207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 471
Target Start/End: Original strand, 9368602 - 9368679
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaag 471  Q
    |||||||||| ||| || |||| |||||||||||||||||||||||| |||| | ||||| ||| || || |||||||    
T  9368602 gtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaag 9368679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 24487721 - 24487677
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  24487721 tgtttataagtgggggtaatcctcacctcacaagccggttttgtg 24487677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 18333777 - 18333698
Alignment:
Q  394 gtgtttataaatggggga-aatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||||  |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  18333777 gtgtttataagtggggggtaatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaaga 18333698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 19705910 - 19705989
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| |||||| | ||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  19705910 gtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggcccaaccacgatttctaagag 19705989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 24531606 - 24531657
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| ||||||||||||||| |||||||| ||||    
T  24531606 gtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttg 24531657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 24647703 - 24647754
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| ||| || |||| |||||||||||||||||||||||| ||||    
T  24647703 gtgtttataactggtggcaatcctcacctcacaagccggttttgtggagttg 24647754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 25258160 - 25258093
Alignment:
Q  405 tgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  25258160 tgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25258093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 25321950 - 25321883
Alignment:
Q  405 tgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  25321950 tgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25321883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 27133069 - 27132994
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| || ||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  27133069 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 42295587 - 42295662
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||| | |||| |||||||||||||||||||||||| |||| | ||||| |||  |||| ||||||    
T  42295587 tgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaacgacaatttctaa 42295662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 440
Target Start/End: Original strand, 15480329 - 15480375
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| |||| ||||||||||||| ||||||||||    
T  15480329 gtgtttataagtgggggcaatcctcacctcacaagctggttttgtgg 15480375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 19522095 - 19522145
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| | |||||| |||| |||||||||||||||||||||||| ||||    
T  19522095 tgtttattagtgggggcaatcctcacctcacaagccggttttgtggggttg 19522145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 379 - 445
Target Start/End: Original strand, 37405081 - 37405147
Alignment:
Q  379 agatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||| |||||||| ||| |||||| ||||  ||||||| ||||||||||||||| ||||    
T  37405081 agatggtctgaaaaagtgtttgtaagtgggggcaatccccacctcaaaagccggttttgtggggttg 37405147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Complemental strand, 2062015 - 2061970
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||    
T  2062015 gtgtttataagtgggggcaatcttcacctcacaagccggtcttgtg 2061970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 435
Target Start/End: Original strand, 6637609 - 6637650
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttt 435  Q
    |||||||||| |||||| |||| |||||||||||||||||||    
T  6637609 gtgtttataagtgggggtaatcctcacctcacaagccggttt 6637650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 26137185 - 26137140
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||||||||| |||| ||| ||||||| ||||||||||||    
T  26137185 tgtttataaatgggggcaatcctcatctcacaaaccggttttgtgg 26137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 29909795 - 29909722
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||| ||| || |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  29909795 tttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaa 29909722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 8287832 - 8287884
Alignment:
Q  418 cacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||||||||||||||||| |||| | ||||| ||| ||||| ||||||    
T  8287832 cacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 8287884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 12151995 - 12151943
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||| |||||||| || |||||  | |||||||||||||||||||||||    
T  12151995 tgaacaagggtttataagtgagggaagccctcacctcacaagccggttttgtg 12151943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 24270179 - 24270131
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||||| |||  |||||||||||||||||||||||| ||||    
T  24270179 tttataagtgggggtaatactcacctcacaagccggttttgtggggttg 24270131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 24346811 - 24346763
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||||| |||  |||||||||||||||||||||||| ||||    
T  24346811 tttataagtgggggtaatactcacctcacaagccggttttgtggggttg 24346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 33337314 - 33337270
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||||||||||||||| ||| |||||||    
T  33337314 tgtttataagtgggggcaatcatcacctcacaaaccgattttgtg 33337270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 379 - 472
Target Start/End: Original strand, 38475739 - 38475832
Alignment:
Q  379 agatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||||||||||||||||| |||||| |||| |||||||||||||||||||||| | |||| | ||||| ||| ||||| ||||||||    
T  38475739 agatggcttgaacaagtgtttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaaga 38475832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 8466593 - 8466532
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaa 427  Q
    ||||| |||||| ||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  8466593 cacatcggataagagatggtctgaacaagtgtttataagtgggggaaatcctcacctcacaa 8466532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 17469826 - 17469901
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||||||| ||| | ||||||    
T  17469826 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 17477073 - 17477148
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||||||| ||| | ||||||    
T  17477073 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 17477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 24532498 - 24532447
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  24532498 gtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttg 24532447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 469
Target Start/End: Original strand, 4828301 - 4828375
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttcta 469  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||||| |||||    
T  4828301 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 38476277 - 38476335
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||    
T  38476277 tgaataagtgtttataagtgggggaaatcctcacctcacaagccgattttgtggggttg 38476335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 42049798 - 42049705
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggc 453  Q
    |||||| |||||||| || ||||||  || ||| |||||||||| |||||| |||| ||||| |||||||||||||||||  |||| |||||||    
T  42049798 gagtcaaacattggacaaaagatggcctggacatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggc 42049705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 438
Target Start/End: Complemental strand, 7267541 - 7267498
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  7267541 tgtttataagtgggggcaatcatcacctcacaagccggttttgt 7267498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 19256662 - 19256587
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  19256662 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 24075382 - 24075307
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 38447504 - 38447453
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  38447504 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 38447453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 39053006 - 39052955
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  39053006 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 39052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 5932026 - 5931980
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  5932026 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtgg 5931980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 10615023 - 10614965
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||||| |||||||| ||||    
T  10615023 tgaacatgtgtttacaaatgggggtaatcttcacctcacaagccgattttgtggggttg 10614965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 11232271 - 11232193
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  11232271 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 11232193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 11232506 - 11232428
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  11232506 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 11232428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 15042747 - 15042669
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||||||||||| ||| ||| |||||||| |||| | ||||||||| ||| | ||||||||    
T  15042747 gtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgttaggctcaaccacgatttctaaga 15042669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 35682858 - 35682780
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  35682858 gtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 37868432 - 37868378
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggc 441  Q
    |||||| |||||||| | |||||| |||| |||||||||||||||||||||||||    
T  37868432 tgaacacgtgtttattagtgggggcaatcctcacctcacaagccggttttgtggc 37868378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 8466835 - 8466750
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| ||||| |||||| ||||||  ||||| ||||||||||| |||||  |||| ||||||||||||| |||||| ||| ||||    
T  8466835 gagtctcacatcggataagagatggcatgaacgagtgtttataagtggggacaatcctcacctcacaagctggttttatggggttg 8466750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 471
Target Start/End: Original strand, 8929024 - 8929101
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaag 471  Q
    |||||||||| |||||| ||||  ||||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||    
T  8929024 gtgtttataactgggggcaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaag 8929101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 37001231 - 37001284
Alignment:
Q  392 aagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||||  |||||| |||| |||||||||||||||||||||||| ||||    
T  37001231 aagtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttg 37001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 440
Target Start/End: Complemental strand, 37868667 - 37868614
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||| |||||||| |||||||| |||| ||||||||||||| ||||||||||    
T  37868667 tgaacatgtgtttattaatgggggcaatcctcacctcacaagctggttttgtgg 37868614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 7729948 - 7729992
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  7729948 gtgtttataagtgggggcaatcctcacctcacaagccggttttgt 7729992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 33503768 - 33503697
Alignment:
Q  221 agatcctaagaaaatcaagagagaaagcttaa--attcttcctctgatgagatctcactatccaaggcgttt 290  Q
    ||||||||||| |||||||||||||| |||    ||||||||||| |||||||||||||| |||||| ||||    
T  33503768 agatcctaagagaatcaagagagaaaacttttttattcttcctctaatgagatctcactacccaaggtgttt 33503697  T

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Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 472
Target Start/End: Original strand, 37001469 - 37001549
Alignment:
Q  392 aagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||||| |||||  |||| |||| ||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  37001469 aagtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 37001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 10450007 - 10450086
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| || ||| |||| |||||||| ||||||||||||| | |||| | ||||||||| ||| | |||||||||    
T  10450007 gtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaagag 10450086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 19256896 - 19256821
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| ||||||||||||| |||||||||| |||| | ||||| ||| ||| | ||||||    
T  19256896 tgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaa 19256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 473
Target Start/End: Original strand, 27205171 - 27205246
Alignment:
Q  398 ttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||| |||||| |||| |||||||| ||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  27205171 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 27205246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 473
Target Start/End: Original strand, 39960211 - 39960278
Alignment:
Q  406 gggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    ||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  39960211 gggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 39960278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 44931266 - 44931215
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||| |||||||||||| |||||| |||| || |||||||||||||||||||    
T  44931266 tgaataagtgtttataagtgggggcaatcctcgcctcacaagccggttttgt 44931215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 4828076 - 4828126
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||| ||||    
T  4828076 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttg 4828126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 470
Target Start/End: Complemental strand, 5590479 - 5590369
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagc 459  Q
    ||||| ||||| |||||  ||||||| |||  | ||||||| || |||||| |||| |||| ||||||||||||||||||  |||| | ||||| ||| |    
T  5590479 gagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaacc 5590380  T
Q  460 acaagttctaa 470  Q
    |||| ||||||    
T  5590379 acaatttctaa 5590369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 5940031 - 5940109
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    ||||| ||||| |||| | |||||||||||  | ||||||||||||||||  |||| |||||||||||||  |||||||    
T  5940031 gagtcccacatcggatgagagatggtttgacaatgtgtttataaatggggacaatcctcacctcacaagcaagttttgt 5940109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 6541914 - 6541968
Alignment:
Q  387 tgaacaagtgtttataaatggggga-aatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| ||||||  |||| ||||||||||||||||||||||||    
T  6541914 tgaacaagtgcttataagtggggggtaatcctcacctcacaagccggttttgtgg 6541968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 472
Target Start/End: Original strand, 20301240 - 20301346
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagt 465  Q
    |||||||||||  |||||| ||||  | |||||||||| |||||| |||| | |||||||||||| ||||||||  |||| | ||||| ||| ||| | |    
T  20301240 cacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatt 20301339  T
Q  466 tctaaga 472  Q
    |||||||    
T  20301340 tctaaga 20301346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 472
Target Start/End: Original strand, 21087872 - 21087978
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagt 465  Q
    |||||||||||  |||||| ||||  | |||||||||| |||||| |||| | |||||||||||| ||||||||  |||| | ||||| ||| ||| | |    
T  21087872 cacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatt 21087971  T
Q  466 tctaaga 472  Q
    |||||||    
T  21087972 tctaaga 21087978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 469
Target Start/End: Complemental strand, 26800584 - 26800514
Alignment:
Q  399 tataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttcta 469  Q
    ||||| |||||| |||| ||||| |||||||||||||||||| |||| | ||||| ||| ||||| |||||    
T  26800584 tataagtgggggcaatcctcaccacacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 26800514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 27204975 - 27205049
Alignment:
Q  398 ttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||||| |||| |||||||| ||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  27204975 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 27205073 - 27205147
Alignment:
Q  398 ttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||||| |||| |||||||| ||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  27205073 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 34843125 - 34843175
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||| | |||| |||||||||||||||||||||||| ||||    
T  34843125 tgtttataagtgggagcaatcctcacctcacaagccggttttgtggggttg 34843175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 37867916 - 37867862
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggc 441  Q
    |||||| |||||||| | |||||| |||  |||||||||||||||||||||||||    
T  37867916 tgaacacgtgtttattagtgggggcaattctcacctcacaagccggttttgtggc 37867862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 37868156 - 37868102
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggc 441  Q
    |||||| |||||||| | |||||| |||| ||||| |||||||||||||||||||    
T  37868156 tgaacacgtgtttattagtgggggcaatcctcaccacacaagccggttttgtggc 37868102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 39984822 - 39984872
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||| ||||||||| ||||    
T  39984822 tgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttg 39984872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 42846682 - 42846604
Alignment:
Q  395 tgtttataaatgg-gggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| ||| ||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  42846682 tgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 4963384 - 4963437
Alignment:
Q  417 tcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    |||||||||||||||||||||||| |||| | ||||| ||| ||||| ||||||    
T  4963384 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 4963437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 12022499 - 12022422
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttg 437  Q
    ||||| |||||||||||| || |||  | ||||||||||||||| | | ||||||| |||||| ||||||| ||||||    
T  12022499 gagtcccacattggataagaggtggcctcaacaagtgtttataagtagcggaaatcctcaccttacaagccagttttg 12022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 22638258 - 22638205
Alignment:
Q  392 aagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||||| | |||| |||| ||||| |||||||||||||||||| ||||    
T  22638258 aagtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttg 22638205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 440
Target Start/End: Original strand, 40014658 - 40014711
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||| |||||||||| |||||| |||| |||| ||||||| |||||||||||    
T  40014658 tgaacatgtgtttataagtgggggcaatcttcacttcacaagtcggttttgtgg 40014711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 6559525 - 6559481
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||    
T  6559525 tgtttataagtgggggcaatcctcaccttacaagccggttttgtg 6559481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 30201599 - 30201555
Alignment:
Q  396 gtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||| |||||  |||| ||||||||||||||||||||||||    
T  30201599 gtttataagtggggtcaatcttcacctcacaagccggttttgtgg 30201555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 439
Target Start/End: Complemental strand, 52676384 - 52676305
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||| |||||| |||||| |||||| || |||||||||||    
T  52676384 gagtcccacattggataagagatggtatgaacaagtgtttataagtgggggtaatcatgacctcaaaaaccggttttgtg 52676305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 472
Target Start/End: Complemental strand, 31181618 - 31181512
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagt 465  Q
    |||||||||||| ||||||  |||||| |||||||||| |||||| |||| ||||||||||||| |||||| ||| |||| | ||||| ||| ||||| |    
T  31181618 cacattggataagagatggcctgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgttaggcccaaccacaaat 31181519  T
Q  466 tctaaga 472  Q
    |||||||    
T  31181518 tctaaga 31181512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 52907358 - 52907442
Alignment:
Q  361 agtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||| ||||| |||||| | |||||||||||| |||||||||| |||||| |||| ||||||||||||| |||||||||| ||||    
T  52907358 agtcccacatcggataaaatatggtttgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttg 52907442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 50695918 - 50695833
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||| |||||||| || ||| |||| ||| |||||||||||||||||||| |||||| |||||  |||||||| ||||||||    
T  50695918 tgaacaagcgtttataagtgagggtaatcctcagctcacaagccggttttgtggggttgagttaggcctaagcacaaattctaaga 50695833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 4113083 - 4113005
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  4113083 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4113005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 26173301 - 26173255
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||    
T  26173301 gtgtttataagtgggggcaatcatcacctcacaagccggttttgtgg 26173255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 40079159 - 40079237
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  40079159 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 473
Target Start/End: Complemental strand, 26865432 - 26865356
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    ||||||| |||||| ||||  ||||||||||||||||||||||| ||||   ||||||||| ||||| |||||||||    
T  26865432 tttataagtgggggcaatccccacctcacaagccggttttgtggggttgtattaggctcaaccacaatttctaagag 26865356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 3169774 - 3169849
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  3169774 tgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 3169849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 52650848 - 52650769
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| ||||||||||||| |||||||||| |||| | ||||| ||| || || |||||||||    
T  52650848 gtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaagag 52650769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 12245038 - 12244988
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  12245038 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 12244988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 17452753 - 17452680
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  17452753 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 41035903 - 41035858
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||    
T  41035903 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgg 41035858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 4098513 - 4098433
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||| ||||| |||||| |||||||||||  | |||||||||| |||||| |||| |||||| |||||  ||||||||||    
T  4098513 gagtcgcacatcggataatagatggtttgataatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtgg 4098433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 7465729 - 7465681
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttt 435  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||||||    
T  7465729 tgaataagtgtttataagtgggggcaatcctcacctcacaagccggttt 7465681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 17452902 - 17452854
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  17452902 tttataagtgggggcaatcttcacctcacaagccggttttgtggggttg 17452854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 34688728 - 34688645
Alignment:
Q  223 atcctaaga-aaatcaagagagaaagcttaaattcttcctctgatgagatctcactatccaaggcgtttaaaatgtttttctcaa 306  Q
    ||||||||| |||||||||||||||||||| | ||||| | | ||| |||||||||| |||||| ||||| ||||| ||||||||    
T  34688728 atcctaagagaaatcaagagagaaagcttaga-tcttcatttaatgggatctcactacccaaggtgtttagaatgtgtttctcaa 34688645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 34693256 - 34693173
Alignment:
Q  223 atcctaaga-aaatcaagagagaaagcttaaattcttcctctgatgagatctcactatccaaggcgtttaaaatgtttttctcaa 306  Q
    ||||||||| |||||||||||||||||||| | ||||| | | ||| |||||||||| |||||| ||||| ||||| ||||||||    
T  34693256 atcctaagagaaatcaagagagaaagcttaga-tcttcatttaatgggatctcactacccaaggtgtttagaatgtgtttctcaa 34693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 38668353 - 38668413
Alignment:
Q  380 gatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||||  | |||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  38668353 gatggtttgacaatgtgtttataagtgggggcaatcatcaccttacaagtcggttttgtgg 38668413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 43480346 - 43480422
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggtttt 436  Q
    ||||| || ||||||| | ||||||  |||||||||||||| || |||||| | || ||||||||||||||||||||    
T  43480346 gagtcccatattggatgagagatggcctgaacaagtgtttacaagtgggggtagtcctcacctcacaagccggtttt 43480422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 25713400 - 25713451
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||||| ||||    
T  25713400 gtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttg 25713451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 31004521 - 31004470
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||| |||||||||| |||||| |||| ||||||||||||| ||||||||    
T  31004521 tgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttgt 31004470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 39348429 - 39348378
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| ||||||||||| |||||||||||| ||||    
T  39348429 gtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttg 39348378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 51589000 - 51589075
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| || ||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  51589000 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 51589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 9146665 - 9146587
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    ||||| ||||| ||| || ||||||| |||||| |||| ||||| |||||| |||| |||||||||||  |||||||||    
T  9146665 gagtcccacatcggacaaaagatggtctgaacatgtgtatataactgggggcaatcctcacctcacaaaacggttttgt 9146587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 440
Target Start/End: Original strand, 16163174 - 16163220
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||||||    
T  16163174 gtgtttataagtgggggcaatcttcacctcacaatccggttttgtgg 16163220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 472
Target Start/End: Complemental strand, 31432295 - 31432229
Alignment:
Q  406 gggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  31432295 gggggcaatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaaga 31432229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 35772271 - 35772349
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| | |||||| ||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  35772271 gtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35772349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 51589234 - 51589284
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| || ||| |||| |||||||||||||||||||||||| ||||    
T  51589234 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttg 51589284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Complemental strand, 2859704 - 2859659
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||| | |||||| |||| |||||||||||||||||||||||    
T  2859704 gtgtttattagtgggggtaatcctcacctcacaagccggttttgtg 2859659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 9146948 - 9146863
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||| |||||||||  ||||  |||| || ||||||||||||||||||||| |||| | || |||||| || || ||||||||    
T  9146948 tgaacaactgtttataagcggggtcaatcctctcctcacaagccggttttgtggagttgtgctacgctcaaccataatttctaaga 9146863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 27656466 - 27656541
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| |||| | ||||| ||| ||||| ||||||    
T  27656466 tgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 27656541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 33494512 - 33494624
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagc 459  Q
    ||||| ||||| |||||  |||||| ||||| |  ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| |    
T  33494512 gagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacc 33494611  T
Q  460 acaagttctaaga 472  Q
    || | ||||||||    
T  33494612 accatttctaaga 33494624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 445
Target Start/End: Complemental strand, 6543048 - 6542969
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| |||||| ||||||| |||  | |||||||||| |||||| ||||||||||||| ||||||||||||||| ||||    
T  6543048 cacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttg 6542969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 4868654 - 4868576
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  4868654 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 4868890 - 4868812
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  4868890 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 9705027 - 9705105
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  9705027 gtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaaga 9705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 8026397 - 8026472
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  8026397 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 9705261 - 9705312
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  9705261 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 9705312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 21690730 - 21690805
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| ||||||||||||||| |||||||| |||| | ||||||||| ||| | ||||||    
T  21690730 tgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaa 21690805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 13353208 - 13353286
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  13353208 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 13353286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 19712722 - 19712772
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  19712722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 19712772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 27772722 - 27772772
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  27772722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttg 27772772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 33796333 - 33796411
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  33796333 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 33796411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 11721913 - 11721990
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  11721913 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 11721990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 237 - 306
Target Start/End: Original strand, 20848611 - 20848680
Alignment:
Q  237 aagagagaaagcttaaattcttcctctgatgagatctcactatccaaggcgtttaaaatgtttttctcaa 306  Q
    ||||||||||||||| ||||||||||| |||| |||| | ||||||||| ||||| |||||  |||||||    
T  20848611 aagagagaaagcttacattcttcctctaatgaaatcttattatccaaggtgtttagaatgtgattctcaa 20848680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 24554127 - 24554200
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||| ||||| || || ||||||    
T  24554127 tttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgttagtctcaaccataatttctaa 24554200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 27653225 - 27653270
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||||    
T  27653225 tgtttataagtgggggaaatcctcacctcacaagtcggttttgtgg 27653270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 28868031 - 28867983
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  28868031 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 28867983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 2753265 - 2753316
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||| ||||    
T  2753265 gtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttg 2753316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 440
Target Start/End: Complemental strand, 17147734 - 17147691
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||    
T  17147734 tttataagtgggggcaatcctcacctcacaagccggttttgtgg 17147691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 471
Target Start/End: Original strand, 30256551 - 30256662
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagc 459  Q
    ||||| ||||| ||| || | |||||||||  | |||||||||| |||||| |||| ||| ||||||| |||||||||||| |||| | ||||| ||| |    
T  30256551 gagtctcacatcggacaatacatggtttgacaatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaacc 30256650  T
Q  460 acaagttctaag 471  Q
    || | |||||||    
T  30256651 acgatttctaag 30256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 473
Target Start/End: Original strand, 13740924 - 13741002
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    ||||||||| |||| | |||| |||| ||||||| ||||||||||| |||| | ||||| ||| ||||| |||||||||    
T  13740924 tgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaagag 13741002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 473
Target Start/End: Original strand, 13746424 - 13746502
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    ||||||||| |||| | |||| |||| ||||||| ||||||||||| |||| | ||||| ||| ||||| |||||||||    
T  13746424 tgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaagag 13746502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 25065170 - 25065120
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| | |||| |||| |||||||||||||||||||||||| ||||    
T  25065170 tgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttg 25065120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 3680253 - 3680298
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| |||||| |||||||||||||||||  |||||||||    
T  3680253 gtgtttataagtgggggcaatcatcacctcacaagttggttttgtg 3680298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 6400922 - 6400877
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| ||| || |||| ||||||||||||||||||||||||    
T  6400922 tgtttataagtggaggcaatcctcacctcacaagccggttttgtgg 6400877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 8026622 - 8026687
Alignment:
Q  405 tgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  8026622 tgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 8026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Complemental strand, 12330256 - 12330211
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| |||||| || | |||||||||||||||||||||||    
T  12330256 gtgtttataagtgggggcaaccctcacctcacaagccggttttgtg 12330211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 19712960 - 19713005
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||  ||||||||||||||||||||||||    
T  19712960 tgtttataagtgggggcaattctcacctcacaagccggttttgtgg 19713005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 27772954 - 27772999
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||    
T  27772954 tgtttataagtgggggcaatcctcacctcacaagctggttttgtgg 27772999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 12199881 - 12199837
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||    
T  12199881 tgtttataagtgggggcaatcatcacctcacaagtccgttttgtg 12199837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 35038271 - 35038193
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  35038271 gtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 54567899 - 54567977
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  54567899 gtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 54567977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 23610474 - 23610397
Alignment:
Q  368 cattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| ||||||| || |||||||||||||| |||||| |||| ||| |||||| ||||||||||||| ||||    
T  23610474 cattggataagagatggtctggacaagtgtttataagtgggggtaatcctcaactcacaggccggttttgtggggttg 23610397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 470
Target Start/End: Complemental strand, 13574998 - 13574922
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||| |||| | ||||| ||| ||||| ||||||    
T  13574998 gtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaa 13574922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 34221740 - 34221811
Alignment:
Q  367 acattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||| || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||| ||||||||    
T  34221740 acattggacaagagatggcctgaacatatgtttataaatgggggaaatcttcacctcacaagcaggttttgt 34221811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 50083158 - 50083112
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  50083158 gtgtttataagtgggggaaatcctcacctcacaagccggttttgtgg 50083112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 1723152 - 1723075
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  1723152 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 1723075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 8018976 - 8019053
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||| | |||| |||||||||||||||||||||||| |||| | ||||| ||| ||||| ||||||||    
T  8018976 tgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaaga 8019053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 11589793 - 11589868
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  11589793 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 11589868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 45138879 - 45138828
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  45138879 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 45138828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 4155331 - 4155409
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||| ||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4155409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 7697471 - 7697397
Alignment:
Q  398 ttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||||| |||||||||||||||||| |||||||||| |||| | |||||  || ||||| ||||||||    
T  7697471 ttataagtgggggcaatcatcacctcacaagctggttttgtggggttgtgttaggcctaaccacaatttctaaga 7697397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 16927026 - 16926948
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| ||| |||||||||||||||||||| |||| | || |||||| ||| | ||||||||    
T  16927026 gtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaaga 16926948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 20327925 - 20327875
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  20327925 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 20327875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 31317473 - 31317551
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||| || |||| | ||||| ||| ||| | ||||||||    
T  31317473 gtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 39269304 - 39269381
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttg 437  Q
    ||||| ||||||||| | || ||||| |||  | |||||||||| |||||| |||| |||||||||||||||||||||    
T  39269304 gagtcccacattggagagcacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttg 39269381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 45828219 - 45828304
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| ||||| ||| || ||||||  |||||| |||||||||| |||||| ||||  |||||||||||| |||||||||| ||||    
T  45828219 gagtcccacatcggacaaaagatggcctgaacatgtgtttataagtgggggcaatctccacctcacaagcaggttttgtggggttg 45828304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 20327688 - 20327640
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  20327688 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 20327640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 20479016 - 20479060
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||    
T  20479016 tgtttataagtgggggaaatcctcacctcacaagccgtttttgtg 20479060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 22729073 - 22729185
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagc 459  Q
    ||||| ||||| |||||  ||||||| |||  | ||||||| || |||||| |||| |||| ||||||||||||||||||  |||| | ||||| ||| |    
T  22729073 gagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaacc 22729172  T
Q  460 acaagttctaaga 472  Q
    |||| ||||||||    
T  22729173 acaatttctaaga 22729185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23691268 - 23691224
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23691268 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23691224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23708068 - 23708024
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23708068 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23708024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23708300 - 23708256
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23708300 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23708256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23726524 - 23726480
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23726524 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23726480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23726756 - 23726712
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23726756 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23726712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23744980 - 23744936
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23744980 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23744936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23745212 - 23745168
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  23745212 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 23745168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 24063505 - 24063461
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  24063505 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 24063461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 24063737 - 24063693
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||    
T  24063737 tgtttataagtgggggcaatcctcacctcacaagccggttttgtg 24063693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 472137 - 472086
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| | |||||||||||||||||||||| ||||    
T  472137 gtgtttataagtgggggcaatccttacctcacaagccggttttgtggggttg 472086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 1681690 - 1681757
Alignment:
Q  372 ggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||| ||||||  | |||| |||||||||| |||| | |||||||||| |||||||||||||||||    
T  1681690 ggataaaagatggcctaaacatgtgtttataagtgggtgtaatcatcaccccacaagccggttttgtg 1681757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 45139048 - 45138997
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| |||| |||||| |||| |||||||||||||||||||||||| ||||    
T  45139048 gtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttg 45138997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 54368523 - 54368574
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||| ||| ||||    
T  54368523 gtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttg 54368574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 9272969 - 9273019
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| || | |||||||||||||||||||||||| ||||    
T  9272969 tgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttg 9273019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 440
Target Start/End: Original strand, 16239598 - 16239644
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| || | ||||||||||||||||||||||||    
T  16239598 gtgtttataagtgggggcaaacctcacctcacaagccggttttgtgg 16239644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 16239835 - 16239912
Alignment:
Q  395 tgtttataaatggggg-aaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||| |||| | ||||  ||||||||| ||||||||    
T  16239835 tgtttataagtgggggcaaatc-tcacctcacaagtcggttttgtggggttgtgttaggtccaagcacaatttctaaga 16239912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 31317236 - 31317313
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| ||||| || || ||||||||||||||||||||||||  ||| | ||||||||| ||| | ||||||||    
T  31317236 gtgtttataagtggggcaa-tcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaaga 31317313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 10274553 - 10274618
Alignment:
Q  221 agatcctaaga-aaatcaagagagaaagcttaaattcttcctctgatgagatctcactatccaagg 285  Q
    ||||||||||| ||||||||||||||| ||||    |||||||| |||||||||||||| ||||||    
T  10274553 agatcctaagagaaatcaagagagaaaacttaggcccttcctctaatgagatctcactacccaagg 10274618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 45828027 - 45828104
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| | |||| |||| |||||||||||||||||||||||  |||| | ||||| | | ||||| ||||||||    
T  45828027 tgtttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaaga 45828104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 1800225 - 1800273
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||| |||||| |||| ||||||||||| |||||||||||| ||||    
T  1800225 tttataagtgggggcaatcctcacctcacaaaccggttttgtggggttg 1800273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 397 - 457
Target Start/End: Complemental strand, 20303138 - 20303078
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaa 457  Q
    ||||||| |||||| |||| ||||||||||| ||||||||||||  ||| | |||||||||    
T  20303138 tttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaa 20303078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 357 - 445
Target Start/End: Complemental strand, 22775512 - 22775424
Alignment:
Q  357 taggagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||| |||||||||||| |||||| ||||||| ||||||| |  ||||||  ||| | |||| | |||||| |||||||| ||||    
T  22775512 taggagtcccacattggataaaagatggcttgaacatgtgtttaaaggtgggggctatccttaccttataagccgattttgtggtgttg 22775424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23691500 - 23691456
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||| |||| |||||||||||||||| ||||||    
T  23691500 tgtttataagtgggggcaatcctcacctcacaagccggatttgtg 23691456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 24866222 - 24866282
Alignment:
Q  412 aatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  24866222 aatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 24866282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 412 - 440
Target Start/End: Complemental strand, 28087274 - 28087246
Alignment:
Q  412 aatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||||||||||||||||||||||    
T  28087274 aatcatcacctcacaagccggttttgtgg 28087246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 41915144 - 41915220
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggtttt 436  Q
    ||||| ||||||||| || |||||   |||||| |||||||||| |||||| |||| ||||||||||| || |||||    
T  41915144 gagtcccacattggaaaagagatgacatgaacatgtgtttataagtgggggcaatcctcacctcacaaaccagtttt 41915220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 50930704 - 50930760
Alignment:
Q  389 aacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||| |||||||||| |||||| |||| |||||||||||  ||||||||||| ||||    
T  50930704 aacatgtgtttataagtgggggcaatcctcacctcacaaaacggttttgtggggttg 50930760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 16419509 - 16419588
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  16419509 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 16419588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 40379286 - 40379207
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  40379286 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagag 40379207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 457
Target Start/End: Original strand, 2324482 - 2324544
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaa 457  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | |||||||||    
T  2324482 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaa 2324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 8227322 - 8227400
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||||||||| | ||||||  ||||||||||||||||| |||||| |||| |||||| || || |||||||||    
T  8227322 gagtcacacattggatgagagatggcatgaacaagtgtttataagtgggggcaatcctcaccttacgaggcggttttgt 8227400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 36352236 - 36352158
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||| |||| | |||| |||| ||||| || |||||    
T  36352236 gtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaaga 36352158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 40379521 - 40379443
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  40379521 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 28407869 - 28407792
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  28407869 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaaga 28407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 37840344 - 37840395
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||| ||||    
T  37840344 gtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttg 37840395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 2324248 - 2324298
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  2324248 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 2324298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 5711516 - 5711438
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  5711516 gtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 5711752 - 5711674
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  5711752 gtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 5711674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 15988223 - 15988265
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||| ||||||||||| |||||||||||||||||||||||    
T  15988223 tttataagtgggggaaatcctcacctcacaagccggttttgtg 15988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 17525415 - 17525369
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  17525415 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtgg 17525369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 17719407 - 17719485
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||| | |||| | | ||| ||| ||||| ||||||||    
T  17719407 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaaga 17719485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 32884115 - 32884165
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  32884115 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 32884165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 33606366 - 33606316
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgtt 444  Q
    |||||||||| |||||| |||| |||||||||||||| |||||||||||||    
T  33606366 gtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgtt 33606316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 25082635 - 25082563
Alignment:
Q  373 gataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| ||||||| |||  | |||||||||| | |||| ||||||||||||||||||| ||||||||| ||||    
T  25082635 gataagagatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttg 25082563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 30006663 - 30006611
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||| |||||||||| |||||  |||||||||| |||||||||||||||||    
T  30006663 tgaacatgtgtttataagtggggataatcatcaccacacaagccggttttgtg 30006611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 30063351 - 30063299
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||| |||||||||| |||||  |||||||||| |||||||||||||||||    
T  30063351 tgaacatgtgtttataagtggggataatcatcaccacacaagccggttttgtg 30063299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 2029776 - 2029827
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| ||| || |||| |||||||||||||||||||||||| ||||    
T  2029776 gtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttg 2029827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 2030011 - 2030062
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| ||| || |||| |||||||||||||||||||||||| ||||    
T  2030011 gtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttg 2030062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 19191686 - 19191611
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  19191686 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19191611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 42639691 - 42639640
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||||||||||  |||| ||||||||||||| |||||||||| ||||    
T  42639691 gtgtttataaatggggacaatcgtcacctcacaagctggttttgtggggttg 42639640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 5509087 - 5509137
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| ||||||||||||| |||||||||| ||||    
T  5509087 tgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttg 5509137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 14466487 - 14466409
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||| | |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  14466487 gtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 14466409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 17855005 - 17854955
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| || ||| |||| |||||||||||||||||||||||| ||||    
T  17855005 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttg 17854955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 19544447 - 19544402
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||    
T  19544447 gtgtttataagtgggggcaatc-tcacctcacaagccggttttgtgg 19544402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 29718336 - 29718386
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| || ||| |||| |||||||||||||||||||||||| ||||    
T  29718336 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttg 29718386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 37770019 - 37769969
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||| ||||    
T  37770019 tgtttataagtgggggcaatcttcacctcataagccggttttgtggggttg 37769969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 40718283 - 40718233
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| || ||| |||||||||||||||| |||||||||||| ||||    
T  40718283 tgtttataagtgagggcaatcatcacctcacaaaccggttttgtggagttg 40718233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Complemental strand, 93520 - 93479
Alignment:
Q  398 ttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||| |||||| |||| |||||||||||||||||||||||    
T  93520 ttataagtgggggcaatcctcacctcacaagccggttttgtg 93479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Complemental strand, 93793 - 93752
Alignment:
Q  398 ttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||| |||||| |||| |||||||||||||||||||||||    
T  93793 ttataagtgggggcaatcctcacctcacaagccggttttgtg 93752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Complemental strand, 94097 - 94052
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||    
T  94097 gtgtttataagtgggggcaatcctcacctcacaagtcggttttgtg 94052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 5509321 - 5509366
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||| ||||| ||||||||||||||||||    
T  5509321 tgtttataagtgggggcaatcctcaccccacaagccggttttgtgg 5509366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 470
Target Start/End: Original strand, 8424898 - 8424971
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||| |||||| |||||||||||||||| || ||||||||| |||| | || |||||| ||| | ||||||    
T  8424898 tttataagtgggggcaatcatcacctcacaaaccagttttgtggggttgtgttaagctcaaccacgatttctaa 8424971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 439
Target Start/End: Original strand, 16533554 - 16533599
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    |||||||||| |||||| |||| |||| ||||||||||||||||||    
T  16533554 gtgtttataagtgggggcaatcctcacttcacaagccggttttgtg 16533599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 473
Target Start/End: Original strand, 17719575 - 17719652
Alignment:
Q  396 gtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||||||| |||||| |||| | ||||||||| |||||||||||| |||| | ||||| ||| ||| | |||||||||    
T  17719575 gtttataagtgggggcaatcctgacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaagag 17719652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 17854768 - 17854723
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||||||| |||||||| |||||||||||    
T  17854768 tgtttataagtgggggcaatcatcatctcacaagtcggttttgtgg 17854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 18208975 - 18209036
Alignment:
Q  374 ataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttt 435  Q
    |||| ||||| | |||||| ||||||||||||||| | ||||||||||||| ||| ||||||    
T  18208975 ataaaagatgatatgaacatgtgtttataaatgggagcaatcatcacctcataagtcggttt 18209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 37527111 - 37527034
Alignment:
Q  214 cacaacaagatcctaagaaaa-tcaagagagaaagcttaaattcttcctctgatgagatctcactatccaaggcgttt 290  Q
    ||||| ||||||||||||||| ||||||||  || | || || |||||||| ||||||||||| ||||||||| ||||    
T  37527111 cacaagaagatcctaagaaaaatcaagagaagaaacatagatccttcctctaatgagatctcattatccaaggtgttt 37527034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 412 - 472
Target Start/End: Original strand, 10570995 - 10571055
Alignment:
Q  412 aatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||| |||||| ||||||||||||||||| |||| | ||||||||| ||| | ||||||||    
T  10570995 aatcttcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaaga 10571055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 440
Target Start/End: Original strand, 15988386 - 15988465
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||| ||||| ||| || ||| || ||||||| ||||| |||| |||||| |||| |||||||||||||| |||||||||    
T  15988386 gagtcccacatcggacaaaagaaggcttgaacatgtgtt-ataagtgggggcaatcctcacctcacaagccagttttgtgg 15988465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 33606165 - 33606085
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||| ||||| |||||  ||||||  |||| | |||||||||| | |||| |||| ||||||||||| ||||||||||||    
T  33606165 gagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaatcctcacctcacaaaccggttttgtgg 33606085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 4505 - 4443
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaa 457  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | |||||||||    
T  4505 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaa 4443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 25620143 - 25620221
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  25620143 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 25620221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 21055029 - 21054952
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  21055029 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 21054952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 472
Target Start/End: Complemental strand, 40899006 - 40898921
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||||||||| |||||| |||||||||||||||||| |||||| |||  ||| | ||||||||| ||| | ||||||||    
T  40899006 tgaacatgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaaga 40898921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 463
Target Start/End: Original strand, 47849550 - 47849647
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaa 463  Q
    ||||| |||||| ||||||  |||||| |||||||||| | |||| |||| ||||||||||| ||||||||||||  ||| | ||||||||| |||||    
T  47849550 cacatcggataaaagatggcatgaacatgtgtttataagttggggcaatcctcacctcacaacccggttttgtgggcttgtgttaggctcaaccacaa 47849647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 23839153 - 23839109
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  23839153 tgtttataagtgggggaaatcctcacctcacaagccggttttgtg 23839109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Complemental strand, 26562149 - 26562074
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||  | ||||||||| ||| | ||||||    
T  26562149 tgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaa 26562074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 34027401 - 34027476
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| |||||| |||| |||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  34027401 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34027476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 48243138 - 48243087
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| ||||    
T  48243138 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 48243087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 9689181 - 9689123
Alignment:
Q  380 gatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    ||||||||||  | ||| |||||| ||||||||||| ||||||||||||||||||||||    
T  9689181 gatggtttgacaatgtgcttataagtgggggaaatcctcacctcacaagccggttttgt 9689123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 47710450 - 47710528
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||||| |||| | ||||| ||| ||| | ||||||||    
T  47710450 gtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaaga 47710528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 47722106 - 47722184
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||||| ||||||||| |||| | ||||| ||| ||| | ||||||||    
T  47722106 gtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaaga 47722184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 1793721 - 1793804
Alignment:
Q  360 gagtcacacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||| |||||||||||| ||||||| ||| ||| ||||||| | |||||| |||| ||||||||||||| |||||||||| ||||    
T  1793721 gagtctcacattggataagagatggtctga-caa-tgtttattagtgggggcaatcctcacctcacaagcaggttttgtggggttg 1793804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 10882081 - 10882036
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||    
T  10882081 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgg 10882036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 34027635 - 34027712
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  34027635 tgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 29469612 - 29469688
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  29469612 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 29469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 470
Target Start/End: Original strand, 29469847 - 29469923
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  29469847 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 29469923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 472
Target Start/End: Complemental strand, 30727197 - 30727117
Alignment:
Q  392 aagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||||| |||||| |||| ||||||||||||| ||||||||   ||| || ||||| ||| ||||| ||||||||    
T  30727197 aagtgtttataagtgggggcaatcctcacctcacaagctggttttgtacggttaagttaggcccaaccacaatttctaaga 30727117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 3038161 - 3038110
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| |||| ||||||||||||||||||| ||||    
T  3038161 gtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttg 3038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 454
Target Start/End: Complemental strand, 21213125 - 21213058
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggct 454  Q
    |||||| |||||||||| |||| | |||||||||||||||||  |||||||||| |||| | ||||||    
T  21213125 tgaacatgtgtttataagtgggagtaatcatcacctcacaagttggttttgtggagttgtgttaggct 21213058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 472
Target Start/End: Original strand, 32474518 - 32474585
Alignment:
Q  405 tgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||| ||||||||||||||||||||||||  ||| | ||||| ||| ||||| ||||||||    
T  32474518 tgggggcaatcctcacctcacaagccggttttgtgggtttgcgttaggcccaaccacaatttctaaga 32474585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 472
Target Start/End: Complemental strand, 33996385 - 33996310
Alignment:
Q  397 tttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    ||||||| |||||| |||| |||||||||||| ||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  33996385 tttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaaga 33996310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 2544523 - 2544473
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||| |||| |||||||||||| ||||||||||| ||||    
T  2544523 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttg 2544473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 10903093 - 10903143
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| | |||| |||| |||||||||||||||||||||||| ||||    
T  10903093 tgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttg 10903143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 366 - 472
Target Start/End: Original strand, 15317532 - 15317637
Alignment:
Q  366 cacattggataacagatggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagt 465  Q
    |||||||||||| ||||||  ||| || |||||||||| |||||| |||| ||||||||||| |  ||||||||| |||| | ||||| ||| || || |    
T  15317532 cacattggataaaagatggcctga-catgtgtttataagtgggggcaatcctcacctcacaaactagttttgtggtgttgtgttaggcccaaccataatt 15317630  T
Q  466 tctaaga 472  Q
    |||||||    
T  15317631 tctaaga 15317637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 457
Target Start/End: Complemental strand, 23794432 - 23794370
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaa 457  Q
    ||||||||||||| || |||| ||||||||||||||  ||||||||  ||||| |||||||||    
T  23794432 tgtttataaatggtggcaatcctcacctcacaagccaattttgtgggattgagttaggctcaa 23794370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 24416812 - 24416874
Alignment:
Q  232 aaatcaagagagaaagcttaaattcttcctctgatgagatctcactatccaaggcgtttaaaa 294  Q
    ||||||| ||||||| ||||||| ||| |||| ||||||||||||||| ||||  ||||||||    
T  24416812 aaatcaaaagagaaaacttaaatcctttctctaatgagatctcactatacaagatgtttaaaa 24416874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 26239993 - 26239915
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||| |||| |||||| |||| | ||| | ||| ||||| ||||||||    
T  26239993 gtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaaga 26239915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 32292519 - 32292577
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||||||||||| ||||||   || |||||||||||||||| ||||||| ||||    
T  32292519 tgaacaagtgtttataagtgggggcggtcctcacctcacaagccggatttgtggggttg 32292577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 43085614 - 43085536
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| ||||||||||||  |||||||||| |||| | || |||||| ||| | ||||||||    
T  43085614 gtgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttaagctcaaccacgatttctaaga 43085536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 4268062 - 4268103
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggtttt 436  Q
    ||||||||| |||||| ||||||||||||| |||||||||||    
T  4268062 tgtttataagtgggggcaatcatcacctcaaaagccggtttt 4268103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 38843024 - 38843081
Alignment:
Q  383 ggtttgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtgg 440  Q
    |||||||||| |||||||||||| | || ||||||||||||| ||  |||||||||||    
T  38843024 ggtttgaacatgtgtttataaatagaggcaatcatcacctcataaatcggttttgtgg 38843081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 4454783 - 4454827
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||||    
T  4454783 gtgtttataagtgggggcaatcctcacctcacaaaccggttttgt 4454827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 4886337 - 4886377
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttt 435  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  4886337 tgtttattaatgggggcaatcctcacctcacaagccggttt 4886377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 35308223 - 35308179
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||| |||||| ||||||||||||||||  |||||||||    
T  35308223 gtgtttataagtgggggcaatcatcacctcacaattcggttttgt 35308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 395 - 439
Target Start/End: Original strand, 40746506 - 40746550
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtg 439  Q
    ||||||||| |||||||||||  ||||||||||||| ||||||||    
T  40746506 tgtttataagtgggggaaatccacacctcacaagccagttttgtg 40746550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 44874423 - 44874379
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgt 438  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  44874423 gtgtttataagtgggggaaatcctcacctcacaaaccgattttgt 44874379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 67278 - 67363
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||| |||||||||| |||||| |||||||||||||||||| |||||| |||  ||| | ||||||||| ||| | ||||||||    
T  67278 tgaacatgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaaga 67363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 14310 - 14361
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||| ||||    
T  14310 gtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttg 14361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 470
Target Start/End: Original strand, 56467 - 56542
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||||||| || ||| ||||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||    
T  56467 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 56542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 1923 - 2001
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  1923 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 2158 - 2236
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||| ||||||||||||||||| |||| | ||||| ||| ||| | ||||||||    
T  2158 gtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaaga 2236  T

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Target: scaffold0083 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 51243 - 51321
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||||||||||| | ||||||||| |||| | || |||||| ||||| ||||||||    
T  51243 gtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgctcaatcacaatttctaaga 51321  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 347655 - 347597
Alignment:
Q  387 tgaacaagtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||||||||||| |||||| | || | |||||||||||||||||||||| ||||    
T  347655 tgaacaagtgtttataattgggggcagtctttacctcacaagccggttttgtggggttg 347597  T

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Target: scaffold0766 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 6281 - 6332
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    |||||||||| |||||| |||| ||||||||||||||| |||||||| ||||    
T  6281 gtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttg 6332  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 82083 - 82162
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaagag 473  Q
    |||| ||||||||||||||||| |||  | |||| |||||||||||| |||| | ||||| ||| ||||| |||||||||    
T  82083 gtgtatataaatgggggaaatcctcaaattacaaaccggttttgtggggttgtgttaggcccaaccacaatttctaagag 82162  T

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Target: scaffold0692 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 5621 - 5543
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| |||| |||||||||||||||| || |||| | ||||| ||| || || ||||||||    
T  5621 gtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaaccataatttctaaga 5543  T

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Target: scaffold0692; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 5831 - 5753
Alignment:
Q  394 gtgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaaga 472  Q
    |||||||||| |||||| |||| ||| ||||||||||||||||| || |||| | ||||| ||| ||| | ||||||||    
T  5831 gtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaaga 5753  T

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Target: scaffold0481 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 3547 - 3497
Alignment:
Q  395 tgtttataaatgggggaaatcatcacctcacaagccggttttgtggcgttg 445  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||| ||||    
T  3547 tgtttataagtggggacaatcttcacctcacaagccggttttgtggggttg 3497  T

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Target: scaffold0400 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 3864 - 3928
Alignment:
Q  406 gggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||| |||| |||||||||||||| ||||||||| |||| | ||||| ||| ||||| ||||||    
T  3864 gggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaa 3928  T

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Target: scaffold0365 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 4508 - 4572
Alignment:
Q  406 gggggaaatcatcacctcacaagccggttttgtggcgttgaggtaggctcaagcacaagttctaa 470  Q
    ||||| |||| |||||||||||||| ||||||||| |||| | ||||| ||| ||||| ||||||    
T  4508 gggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaa 4572  T

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