View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20377_high_10 (Length: 280)
Name: NF20377_high_10
Description: NF20377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20377_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 47117242 - 47117508
Alignment:
| Q |
1 |
cgcatcaaacaattgatgaagaagaagacgatgacgatgttcctcttgactattctgcaattagtggcactagaagcatcggacttggtggtggaagagc |
100 |
Q |
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| T |
47117242 |
cgcatcaaacaattgatgaagaagaagacgatgacgatgttcctcttgactattctgcaattagtggcactagaagcatcggacttggtggtggaagagc |
47117341 |
T |
|
| Q |
101 |
agcgcggcctcgctcccctgtggtagctattattcctttcttacttgtatttatattgatatgttgttgaatgttcattcatccaattcgatgatgttgt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117342 |
agcgcggcctcgctcccctgtggtagctattatttctttcttacttgtatttatattgatatgttgttgaatgttcattcatccaattcgatgatgttgt |
47117441 |
T |
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| Q |
201 |
tgcattctattagacagttaagagtactcaagaacaacctccaccaatgagacctcgttcacctatg |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47117442 |
tgcattctattagacagttaagagtactcaagaacaacctccaccaatgagacctcgttcacctatg |
47117508 |
T |
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