View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20378_high_21 (Length: 308)

Name: NF20378_high_21
Description: NF20378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20378_high_21
NF20378_high_21
[»] chr5 (14 HSPs)
chr5 (1-300)||(22750950-22751249)
chr5 (9-252)||(38144532-38144773)
chr5 (9-247)||(28370055-28370291)
chr5 (9-247)||(19512204-19512441)
chr5 (38-257)||(23528478-23528695)
chr5 (164-247)||(18407944-18408027)
chr5 (164-295)||(23111150-23111283)
chr5 (192-248)||(22438747-22438803)
chr5 (193-248)||(19236900-19236955)
chr5 (195-248)||(22461158-22461211)
chr5 (195-248)||(22467782-22467835)
chr5 (193-248)||(20781744-20781799)
chr5 (219-248)||(17021913-17021942)
chr5 (192-252)||(42961566-42961626)
[»] chr7 (27 HSPs)
chr7 (1-300)||(18873169-18873468)
chr7 (1-260)||(15167984-15168242)
chr7 (1-243)||(10895795-10896037)
chr7 (1-252)||(12709839-12710090)
chr7 (1-252)||(13122910-13123161)
chr7 (9-251)||(14422802-14423043)
chr7 (8-252)||(13743526-13743768)
chr7 (9-247)||(16009395-16009631)
chr7 (38-252)||(12590639-12590851)
chr7 (38-252)||(13007280-13007491)
chr7 (51-245)||(16677152-16677348)
chr7 (51-245)||(17651388-17651584)
chr7 (192-247)||(11382871-11382926)
chr7 (192-247)||(11389348-11389403)
chr7 (192-248)||(20311051-20311107)
chr7 (192-248)||(21230959-21231015)
chr7 (184-247)||(13679485-13679548)
chr7 (193-248)||(2971254-2971309)
chr7 (193-248)||(20906461-20906516)
chr7 (193-247)||(11311059-11311113)
chr7 (212-252)||(831629-831669)
chr7 (212-252)||(1196809-1196849)
chr7 (212-252)||(34958578-34958618)
chr7 (191-247)||(46625961-46626017)
chr7 (193-248)||(29181109-29181164)
chr7 (195-248)||(31155396-31155449)
chr7 (196-248)||(16091078-16091130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-252)||(11846-12097)
scaffold0026 (9-248)||(111504-111741)
[»] chr3 (25 HSPs)
chr3 (1-260)||(14762746-14763004)
chr3 (1-245)||(38310802-38311046)
chr3 (15-245)||(20247791-20248021)
chr3 (8-245)||(24192771-24193009)
chr3 (9-247)||(9534146-9534382)
chr3 (9-248)||(23370505-23370743)
chr3 (57-248)||(24933828-24934016)
chr3 (38-252)||(41455093-41455305)
chr3 (12-245)||(55499104-55499337)
chr3 (79-252)||(16801463-16801635)
chr3 (164-247)||(17240513-17240596)
chr3 (186-247)||(18929239-18929300)
chr3 (193-248)||(13302240-13302295)
chr3 (193-248)||(13323787-13323842)
chr3 (193-248)||(12033444-12033499)
chr3 (193-248)||(13312896-13312951)
chr3 (193-248)||(17131732-17131787)
chr3 (193-248)||(51301589-51301644)
chr3 (174-248)||(10389443-10389517)
chr3 (174-248)||(10414532-10414606)
chr3 (174-248)||(10421202-10421276)
chr3 (193-248)||(14865846-14865901)
chr3 (213-248)||(23392819-23392854)
chr3 (191-245)||(16801027-16801081)
chr3 (212-248)||(2247649-2247685)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-252)||(988-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-252)||(49989-50238)
[»] chr4 (16 HSPs)
chr4 (1-252)||(8045828-8046078)
chr4 (1-252)||(11847916-11848173)
chr4 (59-248)||(53483573-53483760)
chr4 (192-248)||(15408139-15408195)
chr4 (191-247)||(8834895-8834951)
chr4 (191-247)||(13888641-13888697)
chr4 (193-245)||(14486661-14486713)
chr4 (191-247)||(15245215-15245271)
chr4 (191-242)||(22724691-22724742)
chr4 (191-247)||(15308120-15308176)
chr4 (212-252)||(15747552-15747592)
chr4 (193-248)||(16146830-16146885)
chr4 (193-248)||(27906266-27906321)
chr4 (217-247)||(15069781-15069811)
chr4 (217-247)||(15076381-15076411)
chr4 (191-248)||(14912081-14912138)
[»] chr6 (30 HSPs)
chr6 (14-260)||(23057760-23058005)
chr6 (1-252)||(29614142-29614393)
chr6 (9-295)||(23839016-23839303)
chr6 (9-248)||(10986180-10986418)
chr6 (9-252)||(18800255-18800497)
chr6 (12-247)||(4477678-4477912)
chr6 (113-252)||(930091-930229)
chr6 (38-252)||(12168211-12168422)
chr6 (38-252)||(19287120-19287331)
chr6 (38-252)||(19785865-19786076)
chr6 (38-252)||(19878304-19878515)
chr6 (38-252)||(19884080-19884291)
chr6 (9-245)||(21565214-21565449)
chr6 (59-248)||(34639986-34640173)
chr6 (59-248)||(34646660-34646847)
chr6 (165-248)||(25469704-25469785)
chr6 (192-248)||(24512843-24512899)
chr6 (195-247)||(9187498-9187550)
chr6 (191-247)||(25348486-25348542)
chr6 (191-279)||(25397172-25397261)
chr6 (191-245)||(25598643-25598697)
chr6 (176-248)||(31252406-31252478)
chr6 (159-248)||(11288668-11288758)
chr6 (191-247)||(19471335-19471391)
chr6 (191-245)||(2286769-2286823)
chr6 (213-247)||(18659450-18659484)
chr6 (213-247)||(24441673-24441707)
chr6 (195-248)||(15458492-15458545)
chr6 (195-248)||(15465087-15465140)
chr6 (220-248)||(28288509-28288537)
[»] scaffold0029 (1 HSPs)
scaffold0029 (35-252)||(111724-111942)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-252)||(746-997)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-252)||(1893-2143)
scaffold0117 (1-252)||(8570-8820)
[»] scaffold0025 (1 HSPs)
scaffold0025 (8-245)||(14398-14635)
[»] chr8 (15 HSPs)
chr8 (1-252)||(23866423-23866674)
chr8 (9-248)||(44477441-44477678)
chr8 (9-248)||(44492599-44492836)
chr8 (1-245)||(8727735-8727979)
chr8 (38-252)||(17054439-17054650)
chr8 (9-156)||(27940946-27941091)
chr8 (191-302)||(18614271-18614382)
chr8 (164-285)||(23482013-23482136)
chr8 (191-247)||(39364919-39364975)
chr8 (193-260)||(29643374-29643440)
chr8 (192-248)||(14056563-14056619)
chr8 (192-248)||(25111976-25112032)
chr8 (193-248)||(24320670-24320725)
chr8 (191-247)||(21931696-21931752)
chr8 (192-252)||(27940847-27940907)
[»] chr2 (17 HSPs)
chr2 (9-260)||(19661442-19661690)
chr2 (9-247)||(6483536-6483772)
chr2 (9-247)||(6487003-6487239)
chr2 (51-252)||(26583687-26583886)
chr2 (37-245)||(23878853-23879060)
chr2 (9-245)||(23089057-23089292)
chr2 (37-247)||(23101463-23101673)
chr2 (34-248)||(5706023-5706235)
chr2 (164-247)||(23265114-23265197)
chr2 (164-247)||(23280182-23280265)
chr2 (186-247)||(21908353-21908414)
chr2 (191-247)||(24661576-24661632)
chr2 (193-248)||(10577-10632)
chr2 (193-248)||(25180929-25180984)
chr2 (159-248)||(26885148-26885237)
chr2 (195-248)||(23168298-23168351)
chr2 (195-248)||(23579555-23579608)
[»] chr1 (16 HSPs)
chr1 (9-295)||(20436974-20437261)
chr1 (38-252)||(41111883-41112094)
chr1 (183-302)||(32651563-32651682)
chr1 (183-247)||(18712790-18712854)
chr1 (192-247)||(19663517-19663572)
chr1 (191-247)||(20805320-20805376)
chr1 (192-247)||(11158093-11158148)
chr1 (191-245)||(10811785-10811839)
chr1 (193-248)||(20851132-20851187)
chr1 (193-248)||(20857759-20857814)
chr1 (193-248)||(21706276-21706331)
chr1 (193-248)||(21710818-21710873)
chr1 (217-247)||(24476350-24476380)
chr1 (217-247)||(25091418-25091448)
chr1 (213-246)||(18271338-18271371)
chr1 (213-246)||(18275992-18276025)
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-248)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-248)||(1525-1763)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-252)||(11159-11401)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-252)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-252)||(17985-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (165-300)||(904-1039)
scaffold0456 (165-300)||(8049-8184)
scaffold0456 (8-102)||(806-899)
scaffold0456 (8-102)||(7951-8044)
[»] scaffold0154 (1 HSPs)
scaffold0154 (79-252)||(30743-30917)
[»] scaffold0796 (2 HSPs)
scaffold0796 (57-252)||(1728-1920)
scaffold0796 (57-252)||(5751-5943)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-88)||(3471-3558)
[»] scaffold0476 (1 HSPs)
scaffold0476 (9-245)||(3295-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (9-245)||(3624-3859)
[»] scaffold0004 (2 HSPs)
scaffold0004 (164-294)||(116868-116998)
scaffold0004 (213-246)||(60441-60474)
[»] scaffold0129 (1 HSPs)
scaffold0129 (168-248)||(45274-45353)
[»] scaffold0222 (1 HSPs)
scaffold0222 (164-247)||(16792-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (164-247)||(8-91)
[»] scaffold0146 (1 HSPs)
scaffold0146 (164-247)||(13604-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (164-247)||(101928-102011)
[»] scaffold0310 (1 HSPs)
scaffold0310 (192-248)||(17643-17699)
[»] scaffold0107 (1 HSPs)
scaffold0107 (192-248)||(40531-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (192-248)||(135473-135529)
[»] scaffold0235 (1 HSPs)
scaffold0235 (194-246)||(22594-22646)
[»] scaffold0139 (1 HSPs)
scaffold0139 (192-278)||(14967-15052)
[»] scaffold0124 (2 HSPs)
scaffold0124 (192-247)||(34276-34331)
scaffold0124 (191-248)||(35438-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (191-247)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (184-247)||(1378-1441)
[»] scaffold2054 (1 HSPs)
scaffold2054 (159-252)||(680-774)
[»] scaffold0815 (1 HSPs)
scaffold0815 (196-252)||(1453-1509)
[»] scaffold0609 (1 HSPs)
scaffold0609 (176-248)||(5857-5929)
[»] scaffold0096 (1 HSPs)
scaffold0096 (191-251)||(39503-39563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (176-248)||(493028-493099)
[»] scaffold0348 (1 HSPs)
scaffold0348 (193-248)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (193-248)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-248)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (193-247)||(1913-1967)
[»] scaffold0335 (1 HSPs)
scaffold0335 (191-247)||(2628-2684)
[»] scaffold0261 (1 HSPs)
scaffold0261 (193-248)||(23569-23624)
[»] scaffold0249 (1 HSPs)
scaffold0249 (174-248)||(13894-13969)
[»] scaffold0053 (2 HSPs)
scaffold0053 (193-248)||(79490-79545)
scaffold0053 (214-281)||(79057-79125)
[»] scaffold0028 (1 HSPs)
scaffold0028 (195-281)||(69749-69835)
[»] scaffold0610 (1 HSPs)
scaffold0610 (233-302)||(6540-6609)
[»] scaffold0790 (1 HSPs)
scaffold0790 (219-252)||(5480-5513)
[»] scaffold0481 (1 HSPs)
scaffold0481 (201-246)||(676-721)
[»] scaffold0600 (1 HSPs)
scaffold0600 (191-247)||(732-788)
[»] scaffold0453 (1 HSPs)
scaffold0453 (176-248)||(10550-10622)
[»] scaffold0180 (1 HSPs)
scaffold0180 (198-247)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (193-245)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (191-247)||(121902-121958)
scaffold0031 (191-247)||(132778-132834)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 22750950 - 22751249
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22750950 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 22751049  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22751050 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 22751149  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactatacttgttcatctc 300  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22751150 gaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactatacttgttcttctc 22751249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 38144773 - 38144532
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  38144773 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38144674 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  209 agattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagtttt 38144532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  |||||| |||||    
T  28370291 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370192 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28370093 agattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  |||||| |||||    
T  19512204 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| || |||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  19512303 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  208 tagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19512402 tagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 23528478 - 23528695
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  23528478 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatca 23528575  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23528576 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 23528674  T
Q  237 cccttaccttagttttagaag 257  Q
    |||||||||||||||||||||    
T  23528675 cccttaccttagttttagaag 23528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 18408027 - 18407944
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408027 tttattttcaagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 164 - 295
Target Start/End: Complemental strand, 23111283 - 23111150
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaac 261  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    ||| |||     
T  23111283 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaa 23111184  T
Q  262 gcacaacgaccggattctctgactatacttgttc 295  Q
    ||||||| | ||||||||||||||  ||||||||    
T  23111183 gcacaacaatcggattctctgactccacttgttc 23111150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 22438803 - 22438747
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttag 22438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  219 tattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 42961566 - 42961626
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagtttt 42961626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 18873169 - 18873468
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18873169 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 18873268  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18873269 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 18873368  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgcacaacgaccggattctctgactatacttgttcatctc 300  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  18873369 gaaattatagattatgattatcgagagaaagtctcacccttaccttagttttagaagaaacgcacaacggccggattctctgactatacttgttcttctc 18873468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 15167984 - 15168242
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15167984 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 15168083  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15168084 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 15168183  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  15168184 gaaattatagattatgattatcgagagatagtctcacccttacctta-atttagaagaaa 15168242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 10896037 - 10895795
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10896037 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 10895938  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttcc-aaaactatgcaattaggtcaattttc 199  Q
    ||||||||||||||||||| ||| || ||||| |||||||||||| ||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  10895937 aagagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttc 10895839  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttac 243  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  10895838 aaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12710090 - 12709839
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||| |||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  12710090 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 12709992  T
Q  100 caag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaatttt 198  Q
    |||  |||||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  12709991 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 12709893  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12709892 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 12709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 13123161 - 13122910
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||| |||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  13123161 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 13123063  T
Q  100 caag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaatttt 198  Q
    |||  |||||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  13123062 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 13122964  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13122963 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 13122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||| |||||    
T  14422802 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  14422901 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagttt 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14423000 tagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 13743526 - 13743768
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaa 107  Q
    ||||||||||| |||||| ||  ||||| |||||| ||||||||||||||||||| |||| ||||||||| |||| ||||||||  ||| ||||||| ||    
T  13743526 attcatcaatttatccaaccaagcataa-tttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  108 ttaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    || ||||||||||||||||||||||||||||||||||||||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagtttt 13743768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| ||||||||| |||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  16009395 ttcatcaattcatccaatcaatcataa-tttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| || |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  16009494 taacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 12590851 - 12590639
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| ||||||||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatca 12590754  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12590753 gaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 12590655  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  12590654 cccttaccttagtttt 12590639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 13007280 - 13007491
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  13007280 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 13007376  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13007377 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 13007475  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  13007476 cccttaccttagtttt 13007491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaag 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  |||||| | | |||||||||||||||| |  | | | ||| |||||||| |||     
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  151 ccctaaccctcaattt-attttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||| ||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 245
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaag 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  |||||| | | |||||||||||||||| |  | | | ||| |||||||| |||     
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  151 ccctaaccctcaattt-attttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||| ||||| || |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 20311107 - 20311051
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttag 20311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 21231015 - 21230959
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 21230959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 831669 - 831629
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagtttt 831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 1196849 - 1196809
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagtttt 1196809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 34958578 - 34958618
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagtttt 34958618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 12097 - 11846
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12097 tacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattac 11998  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11997 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttca 11898  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11897 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  111504 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111603 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  209 agattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 216; Significance: 1e-118; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 14763004 - 14762746
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14763004 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 14762905  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14762904 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttca 14762805  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  14762804 gaaattatagattatgattatcgagagatagtctcacccttacctta-atttagaagaaa 14762746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38311046 - 38310802
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38311046 tacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 38310947  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  38310946 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattca 38310847  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  38310846 gaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  15 aattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacat 114  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  115 gatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatta 214  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  215 tgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 245
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgat-cacagcaacaacaaagattaagttttcattctgaacattatattacaagaga 106  Q
    ||||||||||| |||||||||  ||||  ||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| | ||||||| |||    
T  24192771 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  107 attaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttcc-aaaactatgcaattaggtcaattttcagaaat 205  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  206 tatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||  |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  9534146 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| | || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534245 taacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9534344 agattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  23370743 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  23370644 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 57 - 248
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaa 156  Q
    |||||||||||  ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaa 24933919  T
Q  157 ccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
       |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933918 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 41455305 - 41455093
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || |||||||| | |  ||||||| |||||||||  |||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  41455305 ttcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatca 41455208  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| ||||||   |||   |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41455207 gaatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 41455109  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  41455108 cccttaccttagtttt 41455093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 55499337 - 55499104
Alignment:
Q  12 atcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaa 111  Q
    |||||||||||||||||   |||  |||||||||||||||||||||||||||   | |||||||| |||||||| |||||| | ||||||| | ||||||    
T  55499337 atcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  112 catgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaatttt-cagaaattatag 210  Q
    |||||||||||| || ||||| |||||||||||| ||| ||||||||||||||||  |   |||   || ||| ||||||||||||| | ||||||| |     
T  55499238 catgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcagttaggtcaattttcccgaaattacat 55499140  T
Q  211 attat-gattattgagagatagtctcacccttacct 245  Q
    |||||  |||| ||||||||||||||||||||||||    
T  55499139 attatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 16801635 - 16801463
Alignment:
Q  79 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt-attttccaaaa 177  Q
    |||||||| ||||| | ||||||  | | |||||||||||||||| |  ||| | ||| |||||||| ||| |||||||| ||||||| || ||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  178 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagtttt 16801463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 17240596 - 17240513
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240596 tttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 10389517 - 10389443
Alignment:
Q  174 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10389517 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 10414606 - 10414532
Alignment:
Q  174 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10414606 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 10421276 - 10421202
Alignment:
Q  174 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10421276 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  213 tatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttag 248  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 988 - 1237
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  988 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 1086  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1087 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 1185  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1186 ggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 49989 - 50238
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49989 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 50087  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50088 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 50186  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50187 ggaattatagattatgattattgagagatagtctcacccttaccttagtttt 50238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8046078 - 8045828
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8046078 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattac 8045979  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttca 200  Q
    |||||||||||||| ||| |||| ||||||||||||||||  ||  ||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8045978 aagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttca 8045880  T
Q  201 gaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8045879 gaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 8045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 11847916 - 11848173
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11847916 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 11848015  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaa------tttattttccaaaactatgcaattaggtcaa 194  Q
    || || ||||||||||||||||| |||| | |||||||||| ||| ||| |||||||||||||      || ||||| ||||||||||| | ||||||||    
T  11848016 aaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaa 11848115  T
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848116 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 11848173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 59 - 248
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  59 gcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaacc 158  Q
    |||||||||  ||||||||||||||||| ||| ||| |||   ||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  159 ctca-atttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
     ||| |||  ||||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 15408139 - 15408195
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 15408195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 15747592 - 15747552
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagtttt 15747552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 23057760 - 23058005
Alignment:
Q  14 caattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaaca 113  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  114 tgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagatt 213  Q
    |||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  214 atgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    |||||||| |||||||||||||||||||||||||  |||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta-atttagaagaaa 23058005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 29614393 - 29614142
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  || ||    
T  29614393 tacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-ac 29614295  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttatttt-ccaaaactatgcaattaggtcaattttc 199  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||    
T  29614294 aagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttc 29614195  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614194 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 29614142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 9 - 295
Target Start/End: Original strand, 23839016 - 23839303
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| ||||||| |||||    
T  23839016 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaa-actatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| ||||| |||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctctgactatacttgttc 295  Q
    |||||||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | ||||||||||||||  ||||||||    
T  23839214 tagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccacttgttc 23839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 10986418 - 10986180
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  | ||| |||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| ||||||| |||||    
T  10986418 ttcatcaattcatccaatcaatcgtaa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||    
T  10986319 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttaccttag 10986180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 18800255 - 18800497
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||   |||  ||||||||||||| |||||||| |||||| | |||||||| ||||||| ||||||| | ||||||| |||||    
T  18800255 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  18800354 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 18800452  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  18800453 tagattatgattattgagagatagtctcacccttacattagtttt 18800497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  12 atcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaa 111  Q
    ||||| |||||||||||  ||||| |||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||| |||||||     
T  4477678 atcaaatcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  112 catgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaattatag 210  Q
    |||||||| ||| |||| |||| ||||||||||| ||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  4477777 catgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  211 attatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 113 - 252
Target Start/End: Complemental strand, 930229 - 930091
Alignment:
Q  113 atgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagat 212  Q
    ||||||||||| |||| |||||||||| ||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  213 tatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagtttt 930091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 12168211 - 12168422
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  12168211 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 12168307  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12168308 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 12168406  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  12168407 cccttaccttagtttt 12168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 19287120 - 19287331
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  19287120 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19287216  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19287217 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19287315  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  19287316 cccttaccttagtttt 19287331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 19786076 - 19785865
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  19786076 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19785980  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  ||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19785979 gaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19785881  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  19785880 cccttaccttagtttt 19785865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 19878304 - 19878515
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  19878304 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19878400  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19878401 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19878499  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  19878500 cccttaccttagtttt 19878515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 19884080 - 19884291
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  19884080 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 19884176  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19884177 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 19884275  T
Q  237 cccttaccttagtttt 252  Q
    |||| |||||||||||    
T  19884276 ccctaaccttagtttt 19884291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 21565449 - 21565214
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||   |||  ||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | | ||||||| | |||    
T  21565449 ttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 21565351  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||||||| |||| ||||| |||||||||| ||| ||||||||||||||||  |   |||   || |||||||||||||||||| |||||||     
T  21565350 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaa 21565252  T
Q  209 agattat-gattattgagagatagtctcacccttacct 245  Q
    | |||||  |||| ||||||||||||||||||||||||    
T  21565251 atattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 248
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  59 gcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaacc 158  Q
    |||||||||  ||||||||||||||||| ||| ||| |||   ||| || |||||| ||| |||||||||  || |||||| ||||| ||| ||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  159 ctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
     ||   ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 59 - 248
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  59 gcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaacc 158  Q
    |||||||||  ||||||||||||||||| ||| ||| |||   ||| || |||||| ||| |||||||||  || |||||| ||||| ||| ||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  159 ctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
     ||   ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 25469785 - 25469704
Alignment:
Q  165 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25469785 ttattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 24512899 - 24512843
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttag 24512843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 25397172 - 25397261
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattct 279  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||  || |||||  ||||||||||||| ||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta-attcagaagaaaaacgcacaacgatcggattct 25397261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 31252406 - 31252478
Alignment:
Q  176 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252406 aactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 11288758 - 11288668
Alignment:
Q  159 ctcaatttattttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  220 attgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 111724 - 111942
Alignment:
Q  35 aatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttccctt 134  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  111724 aatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttccctt 111823  T
Q  135 cagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtc 233  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  111824 cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtc 111923  T
Q  234 tcacccttaccttagtttt 252  Q
    |||||||||||||||||||    
T  111924 tcacccttaccttagtttt 111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 997 - 746
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  997 tacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatattac 899  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttc 199  Q
    ||||| |||| |||||||||||| |||||||||||| |||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  898 aagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttc 799  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  798 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 170; Significance: 3e-91; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 2143 - 1893
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttttc 199  Q
    |||||||||||||| |||||||| ||||  || ||| |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  2043 aagagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 1946  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1945 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8820 - 8570
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||| |||||||  || |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttttc 199  Q
    |||||||||||||| |||||||| ||||  || ||| |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  8720 aagagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttc 8623  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8622 agaaattatagattatgattattgagatatagtctcacccttaccttagtttt 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 163; Significance: 5e-87; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaa 107  Q
    ||||||||||| |||||||||  ||||  ||||||||| |||||||||||||||||| || ||||||||||||||||| |||||| | ||||||| ||||    
T  14635 attcatcaatttatccaatcaatcatat-tttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  108 ttaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttcc-aaaactatgcaattaggtcaattttcagaaatt 206  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  207 atagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 162; Significance: 2e-86; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 23866423 - 23866674
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||| |||| ||||| ||||||||||| ||||||||||  ||||||||||||||||||    
T  23866423 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatatta 23866521  T
Q  100 caag-agaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaatttt 198  Q
    |||  |||||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  23866522 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-ttt 23866620  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23866621 caggaattataaattatgattattgagagatagtctcacccttaccttagtttt 23866674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  |||||| |||||    
T  44477441 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477540 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  209 agattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  |||||| |||||    
T  44492599 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492698 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  209 agattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8727979 - 8727735
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattac 100  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||||    
T  8727979 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 8727880  T
Q  101 aagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttcc-aaaactatgcaattaggtcaattttc 199  Q
    || |||||||||||||||| ||| || | ||| |||||||||||  ||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8727879 aacagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttc 8727781  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  8727780 agaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 17054439 - 17054650
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||| ||| |||||||||  || |||    
T  17054439 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatca 17054535  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17054536 gaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctca 17054634  T
Q  237 cccttaccttagtttt 252  Q
    |||||||||| |||||    
T  17054635 cccttaccttggtttt 17054650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||| | |||||  | ||||||| |||||||||||||||||| ||||||| |||||    
T  27941091 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaa 156  Q
    ||||||||||| ||| || ||||| |||||||||||| ||| ||||||    
T  27940992 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 191 - 302
Target Start/End: Original strand, 18614271 - 18614382
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctctgactatac 289  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  |||||||| |||||||||| || |||||||||||||| |||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta-atttagaagaaaacgcacaatgatcggattctctgactctac 18614369  T
Q  290 ttgttcatctcac 302  Q
    |||||| ||||||    
T  18614370 ttgttcttctcac 18614382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 23482136 - 23482013
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaac 261  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||    ||| |||     
T  23482136 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagatgaacaaaa 23482037  T
Q  262 gcacaacgaccggattctctgact 285  Q
    ||||||| | ||||||||||||||    
T  23482036 gcacaacaatcggattctctgact 23482013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 29643440 - 29643374
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||  |||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta-atttagaagaaa 29643374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 14056619 - 14056563
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttag 14056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 25111976 - 25112032
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttag 25112032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 27940907 - 27940847
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagtttt 27940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 3e-85; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 19661690 - 19661442
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| ||||||| |||||    
T  19661690 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19661591 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  209 agattatgattattgagagatagtctcacccttaccttagttttagaagaaa 260  Q
    ||||||||||||| |||||| ||||||||||||||||||  |||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacctta-atttagaagaaa 19661442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  |||||| |||||    
T  6483536 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483635 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6483734 agattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  |||||| |||||    
T  6487003 ttcatcaattcatcccatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||| ||| |||| |||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487102 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  209 agattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6487201 agattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 51 - 252
Target Start/End: Original strand, 26583687 - 26583886
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaag 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  |||||| | | |||||||||||||||| | |||||| |||||||||||| ||||    
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  151 ccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 23878853 - 23879060
Alignment:
Q  37 tttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    |||||||||||||||||||||| |||||  | |||||||| ||||||||||||||| | ||||||| | |||||||||||||||||| |  ||||| |||    
T  23878853 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctca 23878952  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| ||||||||||||||||| |   |||   || |||||||||||||||||  ||||||||| || || |||| |||||||||||||||    
T  23878953 gaatcatcaacaa-ccctaaccctcaatttaatcctcaaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctca 23879051  T
Q  237 cccttacct 245  Q
    |||||||||    
T  23879052 cccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 23089292 - 23089057
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||   |||  ||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | | ||||||| | |||    
T  23089292 ttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 23089194  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||||||| |||| ||||| |||||||||| ||| ||||||||||||||||  |   |||   || |||||||||||||||||| |||||||     
T  23089193 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattaa 23089095  T
Q  209 agattat-gattattgagagatagtctcacccttacct 245  Q
    | |||||  |||| ||||||||||||||||||||||||    
T  23089094 atattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 37 - 247
Target Start/End: Complemental strand, 23101673 - 23101463
Alignment:
Q  37 tttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    |||||||||||||||||||||| |||||  | |||||||| |||||||| |||| | | ||||||| | |||||||||||||||||| || ||||| |||    
T  23101673 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattaccca-ttcccctca 23101575  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 235  Q
    ||||||||| ||| ||||||||||||||||  |   |||   ||  ||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  23101574 gaatcatcatcaaaccctaaccctcaattttatcctcaaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctc 23101475  T
Q  236 acccttacctta 247  Q
    ||||||||||||    
T  23101474 acccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 248
Target Start/End: Complemental strand, 5706235 - 5706023
Alignment:
Q  34 aaatttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttccc 132  Q
    ||||||||||||||| ||| ||   ||||||||||  ||| ||| ||||||||| ||||||| |||   ||| || |||||| ||| |||||||||  ||    
T  5706235 aaatttcaatcaattaatggattgtagcaacaacatggatcaagctttcattcttaacattaaattcagaga-aactaacatcatctttactcatt--cc 5706139  T
Q  133 ttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
     |||||||||||| ||| ||||||   |||  ||||||| ||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  5706138 atcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatag 5706040  T
Q  232 tctcacccttaccttag 248  Q
    |||||||||||||||||    
T  5706039 tctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 23265114 - 23265197
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265114 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 23280182 - 23280265
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280182 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 26885148 - 26885237
Alignment:
Q  159 ctcaatttattttccaa-aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| || ||||| |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||    
T  26885148 ctcaattttttctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttag 26885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23168351 - 23168298
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttag 23168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 23579608 - 23579555
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttag 23579555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 9 - 295
Target Start/End: Complemental strand, 20437261 - 20436974
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| ||||||| | |||    
T  20437261 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20437162 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagttt--tagaagaaacgcacaacgaccggattctctgactatacttgttc 295  Q
    |||||||||||||||||||||||||||||||||||||||| |||    ||| ||| ||||||| | ||||||||||||||  ||||||||    
T  20437063 tagattatgattattgagagatagtctcacccttaccttaatttagatgaacaaaagcacaacaatcggattctctgactccacttgttc 20436974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 41111883 - 41112094
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| ||| ||||| || |||||   || |||||||||  || |||    
T  41111883 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatca 41111979  T
Q  137 gaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 236  Q
    ||||||||| ||| |||||||  |||  ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41111980 gaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctca 41112078  T
Q  237 cccttaccttagtttt 252  Q
    ||||||||||||||||    
T  41112079 cccttaccttagtttt 41112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 32651563 - 32651682
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctct 281  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||| ||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaacacacaacgatcggattctct 32651661  T
Q  282 gactatacttgttcatctcac 302  Q
    ||||  |||||||| ||||||    
T  32651662 gactccacttgttcttctcac 32651682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  10433 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10334 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||    
T  1763 ttcatcaattcatccaatcaatcataa-tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaatta 207  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  1664 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  208 tagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 11159 - 11401
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||   |||  ||||||||||||| ||||||||||||||  |  ||||||| ||||||| ||||||| | ||||||| |||||    
T  11159 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaat 11257  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatt-tattttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  11258 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 11356  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11357 tagattatgattattgagagatagtctcacccttaccttagtttt 11401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 109 - 350
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaa 107  Q
    ||||||||||| |||||| ||  ||||| |||||| ||||||||||||||| ||| |||| ||||||||| |||| ||||||||  ||| ||||||| ||    
T  109 attcatcaatttatccaaccaatcataa-tttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  108 ttaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||||||||||| |||| |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  208 tagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagtttt 350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 17985 - 18229
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaag-aga 106  Q
    ||||||||||| |||||||||  |  ||||||||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||||||  |||    
T  17985 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  107 attaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaa-ctatgcaattaggtcaattttcagaaat 205  Q
    |||||||||| |||||| |||||||| | ||||||||||  || || |||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||    
T  18084 attaacatgaccattac-catttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  206 tatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagtttt 18229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 120; Significance: 2e-61; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 904 - 1039
Alignment:
Q  165 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 264  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 1003  T
Q  265 caacgaccggattctctgactatacttgttcatctc 300  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1004 caacgaccggattctctgactatacttgttcttctc 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 8049 - 8184
Alignment:
Q  165 ttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 264  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagttttagaagaaacgca 8148  T
Q  265 caacgaccggattctctgactatacttgttcatctc 300  Q
    ||||||||||||||||||||| ||||||||| ||||    
T  8149 caacgaccggattctctgactctacttgttcttctc 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 806 - 899
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaa 102  Q
    ||||||||||| |||||||| | ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  806 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 7951 - 8044
Alignment:
Q  8 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaa 102  Q
    ||||||||||| |||||||| | ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||    
T  7951 attcatcaatttatccaatccctcataa-ttccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 252
Target Start/End: Original strand, 30743 - 30917
Alignment:
Q  79 ttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaattt-attttccaaaa 177  Q
    ||||||||| |||| |  |||||| | | ||||||||||| |||| |  ||||| ||| |||||||| ||| |||||| ||||||||| |  ||||||||    
T  30743 ttcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaa 30842  T
Q  178 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30843 ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 30917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 1920 - 1728
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaa 156  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  157 ccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |  |||  ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtttt 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 57 - 252
Target Start/End: Complemental strand, 5943 - 5751
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattactcatttcccttcagaatcatcaccaagccctaa 156  Q
    |||||||| ||  ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||||||||  || |||||||||||| ||| ||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  157 ccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |  |||  ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtttt 5751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3471 - 3558
Alignment:
Q  1 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3471 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3531 - 3295
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||   |||  ||||||||||||| ||||||||||||||  | |||||||| ||||||||||||||| | ||||||| | |||    
T  3531 ttcatcaattcatccaatcaattatat-tttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaat 3433  T
Q  109 taacatga-tcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaatta 207  Q
    |||||||| ||||||| || ||||| |||||||||||| ||| ||||||||||||||||  |  ||||   || |||||||||||||||||| |||||||    
T  3432 taacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatccccaaggttaagcaattaggtcaattttccgaaatta 3334  T
Q  208 tagattat-gattattgagagatagtctcacccttacct 245  Q
     | |||||  |||| ||||||||||||||||||||||||    
T  3333 catattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3859 - 3624
Alignment:
Q  9 ttcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattacaagagaat 108  Q
    ||||||||||||||||||||   |||  |||||||||||||||||||||| |||||  | |||||||| |||||||| |||||| | ||||||| | |||    
T  3859 ttcatcaattcatccaatcaattatat-tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataat 3761  T
Q  109 taacatgatcattactcatttcccttcagaatcatcaccaagccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 208  Q
    ||||||||||||||| || | ||| |||||||||||| ||| ||||||||||||||||  |   |||   || |||||||||||||||||| |||||||     
T  3760 taacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcctcaaggttaagcaattaggtcaattttccgaaattac 3662  T
Q  209 agattat-gattattgagagatagtctcacccttacct 245  Q
    | |||||  |||| ||||||||||||||||||||||||    
T  3661 atattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 294
Target Start/End: Original strand, 116868 - 116998
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacg 262  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||| ||||     
T  116868 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta-atttagaagaaaaca 116966  T
Q  263 cacaacgaccggattctctgactatacttgtt 294  Q
    |||||||| ||||||||||||||  |||||||    
T  116967 cacaacgatcggattctctgactccacttgtt 116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 45353 - 45274
Alignment:
Q  168 ttttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45353 ttttcaaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttag 45274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 16792 - 16875
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16792 tttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 91 - 8
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  91 tttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 13604 - 13687
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13604 tttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 102011 - 101928
Alignment:
Q  164 tttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| | ||| || ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  102011 tttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 17643 - 17699
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttag 17699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 40587 - 40531
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 40531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 135473 - 135529
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttag 135529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  194 attttcagaaattatagattatgattattgagagatagtctcacccttacctt 246  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 15052 - 14967
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattc 278  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||   ||||||| ||||||||||||| |||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta--attagaagaaaacgcacaacgatcggattc 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 680 - 774
Alignment:
Q  159 ctcaatttattttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagtttt 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 1453 - 1509
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaatttt 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 5929 - 5857
Alignment:
Q  176 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||| ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5929 aactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 251  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 493099 - 493028
Alignment:
Q  176 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttag 493028  T

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Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 23624 - 23569
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttag 23569  T

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Target: scaffold0249 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 13969 - 13894
Alignment:
Q  174 aaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| ||||||| | |||||| ||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13969 aaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

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Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 281
Target Start/End: Complemental strand, 79125 - 79057
Alignment:
Q  214 atgattattgagagatagtctcacccttaccttagttttagaag--aaacgcacaacgaccggattctct 281  Q
    ||||| |||||||| ||| |||||||||||||||  ||||||||  ||||||||||||| ||||||||||    
T  79125 atgatcattgagagttagcctcacccttacctta-atttagaagaaaaacgcacaacgatcggattctct 79057  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 69749 - 69835
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttagaag-aaacgcacaacgaccggattctct 281  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||  |||||||| |||||| |||||| || |||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta-atttagaagaaaacgcgcaacgatcgaattctct 69835  T

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Target: scaffold0610 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 6540 - 6609
Alignment:
Q  233 ctcacccttaccttagttttagaagaaa-cgcacaacgaccggattctctgactatacttgttcatctcac 302  Q
    ||||||||||||||| ||| |||||||| |||||||||| || |||||||| || ||||||||| ||||||    
T  6540 ctcacccttaccttaattt-agaagaaaacgcacaacgatcgaattctctggctctacttgttcttctcac 6609  T

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Target: scaffold0790 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 5480 - 5513
Alignment:
Q  219 tattgagagatagtctcacccttaccttagtttt 252  Q
    |||||| |||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagtttt 5513  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  201 gaaattatagattatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 732 - 788
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 10622 - 10550
Alignment:
Q  176 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||| ||||| ||||| || ||| ||||||||||    
T  10622 aactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  198 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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