View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2037_low_25 (Length: 239)

Name: NF2037_low_25
Description: NF2037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2037_low_25
NF2037_low_25
[»] chr7 (7 HSPs)
chr7 (1-222)||(4571586-4571809)
chr7 (24-60)||(13578052-13578088)
chr7 (24-60)||(25002973-25003009)
chr7 (24-60)||(48176230-48176266)
chr7 (22-69)||(23080809-23080856)
chr7 (77-115)||(25432167-25432205)
chr7 (24-60)||(39182201-39182237)
[»] chr3 (7 HSPs)
chr3 (24-63)||(20626748-20626787)
chr3 (77-115)||(19954451-19954489)
chr3 (71-116)||(10661755-10661800)
chr3 (30-63)||(34878743-34878776)
chr3 (24-60)||(1743255-1743291)
chr3 (24-60)||(3328813-3328849)
chr3 (24-60)||(22447740-22447776)
[»] chr1 (7 HSPs)
chr1 (24-63)||(24962221-24962260)
chr1 (22-60)||(2657777-2657815)
chr1 (75-115)||(2427329-2427369)
chr1 (22-58)||(10685027-10685063)
chr1 (24-60)||(16972118-16972154)
chr1 (24-60)||(24196261-24196297)
chr1 (24-60)||(28920919-28920955)
[»] chr5 (12 HSPs)
chr5 (70-115)||(17823647-17823692)
chr5 (24-60)||(25557142-25557178)
chr5 (24-63)||(31576490-31576529)
chr5 (24-62)||(36641406-36641444)
chr5 (74-115)||(15531387-15531428)
chr5 (24-57)||(32466100-32466133)
chr5 (76-117)||(43233924-43233965)
chr5 (24-60)||(20654062-20654098)
chr5 (71-115)||(21254242-21254286)
chr5 (24-60)||(23765420-23765456)
chr5 (24-60)||(23815268-23815304)
chr5 (1-60)||(36641143-36641203)
[»] chr4 (5 HSPs)
chr4 (70-115)||(20880038-20880083)
chr4 (75-119)||(21215018-21215062)
chr4 (1-63)||(19232588-19232651)
chr4 (22-60)||(45633438-45633476)
chr4 (24-60)||(20919335-20919371)
[»] scaffold0025 (1 HSPs)
scaffold0025 (24-63)||(19282-19321)
[»] chr6 (2 HSPs)
chr6 (77-116)||(1136227-1136266)
chr6 (22-62)||(19282476-19282516)
[»] chr8 (3 HSPs)
chr8 (78-116)||(5690859-5690897)
chr8 (24-62)||(8802667-8802705)
chr8 (71-115)||(13856765-13856809)
[»] chr2 (1 HSPs)
chr2 (22-63)||(9787823-9787864)
[»] scaffold0419 (1 HSPs)
scaffold0419 (24-64)||(2957-2997)
[»] scaffold0179 (1 HSPs)
scaffold0179 (24-60)||(5650-5686)
[»] scaffold0174 (1 HSPs)
scaffold0174 (24-60)||(29719-29755)
[»] scaffold0060 (1 HSPs)
scaffold0060 (24-60)||(66441-66477)


Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 4571586 - 4571809
Alignment:
Q  1 ttaataggcgaccaaaatcatatattttgaaacttagggggcgaaaagtacagtttagccaaatagttaagttacttttctctcattccttccatgaatg 100  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4571586 ttaataggcgaccaaaatcgtacattttgaaacttaggaagcgaaaaatgcagtttagccaaatagttaagttacttttctctcattccttccatgaatg 4571685  T
Q  101 tcatgtttcataaca-aaatagtacacagctgttcaatttaggaacaatatagatatgtaatcacaaaacaatctagcaaattaatttatgaaa-ttttt 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4571686 tcatgtttcataacacaaatagtacacagctgttcaatttaggaacaatatagatatgtaatcacaaaacaatctagcaaattaatttatgaaatttttt 4571785  T
Q  199 tctgcaaatttctttagcccttgt 222  Q
    ||||||||||||||||| ||||||    
T  4571786 tctgcaaatttctttagtccttgt 4571809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 13578052 - 13578088
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13578052 attttgaaacttagggggcgaaaagtagagtttagcc 13578088  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 25002973 - 25003009
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||| |||||||||||||||||||||||||||||||    
T  25002973 attttaaaacttagggggcgaaaagtacagtttagcc 25003009  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 48176230 - 48176266
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||| |||||||||    
T  48176230 attttgaaacttagggggcgaaaagtagagtttagcc 48176266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 23080856 - 23080809
Alignment:
Q  22 atattttgaaacttagggggcgaaaagtacagtttagccaaatagtta 69  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| |||||    
T  23080856 atattttgaaacttaaggggcaaaaagtgcagtttagccaaaaagtta 23080809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 25432167 - 25432205
Alignment:
Q  77 tttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  25432167 tttctctcattccttccatggatgccatgtttcataaca 25432205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 39182201 - 39182237
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  39182201 atttttaaacttagggggcgaaaagtgcagtttagcc 39182237  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 20626787 - 20626748
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  20626787 attttgaaacttaggggacgaaaagtacagtttagccaaa 20626748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 19954489 - 19954451
Alignment:
Q  77 tttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  19954489 tttctctccttccttccatggatgtcatgtttcataaca 19954451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 10661800 - 10661755
Alignment:
Q  71 gttacttttctctcattccttccatgaatgtcatgtttcataacaa 116  Q
    |||| ||||||||||||| ||||||| |||||||||||| ||||||    
T  10661800 gttagttttctctcattctttccatggatgtcatgtttcctaacaa 10661755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 34878743 - 34878776
Alignment:
Q  30 aaacttagggggcgaaaagtacagtttagccaaa 63  Q
    ||||||||||||||||||||| ||||||||||||    
T  34878743 aaacttagggggcgaaaagtagagtttagccaaa 34878776  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 1743291 - 1743255
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  1743291 attttgaaacttagggtgcgaaaagtgcagtttagcc 1743255  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 3328849 - 3328813
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  3328849 attttgaaacatagggggcgaaaagtgcagtttagcc 3328813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 22447776 - 22447740
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  22447776 attttgaaacatagggggcgaaaagtgcagtttagcc 22447740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 24962221 - 24962260
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaaa 63  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24962221 attttgaaacatagggggcgaaaagtacagtttagccaaa 24962260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 2657777 - 2657815
Alignment:
Q  22 atattttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  2657777 atattttgaaacttagggggcgaaaagtgtagtttagcc 2657815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 2427329 - 2427369
Alignment:
Q  75 cttttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    |||||||||||||||||||||| ||| |||||||| |||||    
T  2427329 cttttctctcattccttccatggatgccatgtttcctaaca 2427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 10685027 - 10685063
Alignment:
Q  22 atattttgaaacttagggggcgaaaagtacagtttag 58  Q
    |||||||||||||||||||||||||| | ||||||||    
T  10685027 atattttgaaacttagggggcgaaaaatgcagtttag 10685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 16972118 - 16972154
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  16972118 attttaaaacttagggggcgaaaagtgcagtttagcc 16972154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 24196297 - 24196261
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||  |||||||||    
T  24196297 attttgaaacttagggggcgaaaagtggagtttagcc 24196261  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 28920919 - 28920955
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||  |||||||||    
T  28920919 attttgaaacttagggggcgaaaagtgaagtttagcc 28920955  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 17823647 - 17823692
Alignment:
Q  70 agttacttttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  17823647 agttatttttctctcattccttccatgaatggcatgtctcataaca 17823692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 25557142 - 25557178
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25557142 attttgaaacttagggggcgaaaagtagagtttagcc 25557178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 31576529 - 31576490
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaaa 63  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  31576529 attttgaaacttaggggtcgaaaagtgcagtttagccaaa 31576490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 36641406 - 36641444
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaa 62  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  36641406 attttgaaacatagggggcgaaaagtgcagtttagccaa 36641444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 15531428 - 15531387
Alignment:
Q  74 acttttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    |||||||||||||| |||| ||||||||| ||||||||||||    
T  15531428 acttttctctcatttcttctatgaatgtcgtgtttcataaca 15531387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 32466100 - 32466133
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagttta 57  Q
    ||||||||||||||||| ||||||||||||||||    
T  32466100 attttgaaacttaggggacgaaaagtacagttta 32466133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 43233924 - 43233965
Alignment:
Q  76 ttttctctcattccttccatgaatgtcatgtttcataacaaa 117  Q
    ||||||||||||||||||||| ||| |||||||| |||||||    
T  43233924 ttttctctcattccttccatggatgccatgtttcctaacaaa 43233965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 20654062 - 20654098
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  20654062 attttgaaacttaggggtcgaaaagtgcagtttagcc 20654098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 21254242 - 21254286
Alignment:
Q  71 gttacttttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    |||||||||||||| ||||||||||| ||| |||||||| |||||    
T  21254242 gttacttttctctccttccttccatggatgccatgtttcctaaca 21254286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 23765456 - 23765420
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  23765456 attttgaaacatagggggcgaaaagtgcagtttagcc 23765420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 23815304 - 23815268
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  23815304 attttgaaacatagggggcgaaaagtgcagtttagcc 23815268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36641203 - 36641143
Alignment:
Q  1 ttaataggcgaccaaaatcata-tattttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||| ||||||||||| | |||||||||||||||  ||||||||||  |||||||||    
T  36641203 ttaataggggaccaaaatcacaatattttgaaacttagaaggcgaaaagtgaagtttagcc 36641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 20880083 - 20880038
Alignment:
Q  70 agttacttttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||    
T  20880083 agttacttttctctcattccttccatggatatcatgcttcataaca 20880038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 21215018 - 21215062
Alignment:
Q  75 cttttctctcattccttccatgaatgtcatgtttcataacaaaat 119  Q
    |||||||||||||||||||||| |||||||||||  |||||||||    
T  21215018 cttttctctcattccttccatggatgtcatgtttactaacaaaat 21215062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19232588 - 19232651
Alignment:
Q  1 ttaataggcgaccaaaatcatat-attttgaaacttagggggcgaaaagtacagtttagccaaa 63  Q
    |||||||| ||||||||||| |  ||||||||||||||||||| ||||||  ||||||||||||    
T  19232588 ttaataggtgaccaaaatcacaacattttgaaacttagggggcaaaaagtggagtttagccaaa 19232651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 45633476 - 45633438
Alignment:
Q  22 atattttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  45633476 atattttgaaacttagggggcgaaaagtgtagtttagcc 45633438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 20919371 - 20919335
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  20919371 attttgaaacttaggggtcgaaaagtgcagtttagcc 20919335  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 19321 - 19282
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaaa 63  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  19321 attttgaaacttaggaggcgaaaagtagagtttagccaaa 19282  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 1136266 - 1136227
Alignment:
Q  77 tttctctcattccttccatgaatgtcatgtttcataacaa 116  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  1136266 tttctctcattccttccatggatgtcatgtttgataacaa 1136227  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 19282476 - 19282516
Alignment:
Q  22 atattttgaaacttagggggcgaaaagtacagtttagccaa 62  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  19282476 atattttaaaacttacgggacgaaaagtacagtttagccaa 19282516  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 5690859 - 5690897
Alignment:
Q  78 ttctctcattccttccatgaatgtcatgtttcataacaa 116  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  5690859 ttctctcattccttccatggatgccatgtttcataacaa 5690897  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 8802667 - 8802705
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaa 62  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  8802667 attttgaaacttagagggcgaaaagtaaagtttagccaa 8802705  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 13856765 - 13856809
Alignment:
Q  71 gttacttttctctcattccttccatgaatgtcatgtttcataaca 115  Q
    |||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  13856765 gttagttttctctccttctttccatggatgtcatgtttcataaca 13856809  T

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Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 9787823 - 9787864
Alignment:
Q  22 atattttgaaacttagggggcgaaaagtacagtttagccaaa 63  Q
    |||||||||||| |||||||||||||||  ||||||||||||    
T  9787823 atattttgaaacatagggggcgaaaagtgtagtttagccaaa 9787864  T

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Target: scaffold0419 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 2997 - 2957
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagccaaat 64  Q
    |||||||||| ||||||||||||||| || |||||||||||    
T  2997 attttgaaacatagggggcgaaaagtgcactttagccaaat 2957  T

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Target: scaffold0179 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 5686 - 5650
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  5686 attttgaaacatagggggcgaaaagtgcagtttagcc 5650  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 29755 - 29719
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  29755 attttgaaacttagggggcaaaaagtgcagtttagcc 29719  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 66441 - 66477
Alignment:
Q  24 attttgaaacttagggggcgaaaagtacagtttagcc 60  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  66441 attttgaaacatagggggcgaaaagtgcagtttagcc 66477  T

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