View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20381_high_37 (Length: 273)
Name: NF20381_high_37
Description: NF20381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20381_high_37 |
 |  |
|
| [»] scaffold0426 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 4141872 - 4141756
Alignment:
| Q |
144 |
cacttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatttcaactatacattgtccgtagg |
243 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4141872 |
cacttgtaactacggacaaaatccgtcataaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatttcaactatacattgtccatagg |
4141773 |
T |
 |
| Q |
244 |
taaatgtcaatttgtct |
260 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
4141772 |
taaatgtcaatttgtct |
4141756 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 4141941 - 4141896
Alignment:
| Q |
75 |
ggtccttggcacagggcctcaaacttaaaggggctttaaaatttgg |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
4141941 |
ggtccttggcacagggcctcaaacttaaagaggcttcaaaatttgg |
4141896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 263
Target Start/End: Complemental strand, 9779894 - 9779781
Alignment:
| Q |
151 |
acctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtaggtaaatg |
249 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||| | ||||||||||| ||||||| |||| |||| | |||| | |||||||| ||||||||||| |
|
|
| T |
9779894 |
acctacggacaaaatccgtcattaaatatcattttcccataagtaaaagtctagaattccactattttactatcaattgtacattgtttgtaggtaaatg |
9779795 |
T |
 |
| Q |
250 |
tcaatttgtctgtg |
263 |
Q |
| |
|
| |||||||||| |
|
|
| T |
9779794 |
tgtgtttgtctgtg |
9779781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 7503887 - 7503942
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagt |
200 |
Q |
| |
|
||||||| |||| ||||||||| ||||| ||||||||||||| |||| |||||||| |
|
|
| T |
7503887 |
acttgtatctacagacaaaatctgtcattaaatgtcatttttttgtaggtaaaagt |
7503942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 4141975 - 4141942
Alignment:
| Q |
18 |
atgcatgggatcaatactaccattgttaagaggg |
51 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
4141975 |
atgcatgggatcaatactaccattgttaacaggg |
4141942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 9779971 - 9779927
Alignment:
| Q |
62 |
gcaagtgcatcaaggtccttggcacagggcctcaaacttaaaggg |
106 |
Q |
| |
|
|||||||||||||| ||||||||||| | |||||| ||||||||| |
|
|
| T |
9779971 |
gcaagtgcatcaagttccttggcacaagacctcaagcttaaaggg |
9779927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 5031193 - 5031297
Alignment:
| Q |
148 |
tgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtaggtaa |
246 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| ||| ||||||| ||||||||||||| |||| | |||| |||||||||| ||||||||| |
|
|
| T |
5031193 |
tgtacctacggacaaaattcgtcactaaatgtcatttttccataaataaaagtccagaattcaactattttactgtcaattatacattgttcgtaggtaa |
5031292 |
T |
 |
| Q |
247 |
atgtc |
251 |
Q |
| |
|
||||| |
|
|
| T |
5031293 |
atgtc |
5031297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 26554476 - 26554366
Alignment:
| Q |
147 |
ttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatt-tcaactatacattgtccgtaggta |
245 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| |||||| |||||||| | ||||||||||||| | | || | |||||||||||||| ||| |
|
|
| T |
26554476 |
ttgtacctacggacaaaatacgtcactaaatgtcatttatctgtaggtaaaagtccgaaattcaactattttactgtccataatacattgtccgtaagta |
26554377 |
T |
 |
| Q |
246 |
aatgtcaattt |
256 |
Q |
| |
|
|||||| |||| |
|
|
| T |
26554376 |
aatgtctattt |
26554366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 3516953 - 3516841
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatt-tcaactatacattgtccgtagg |
243 |
Q |
| |
|
|||| |||||||||||||||| ||||| ||||||||||||| ||| |||||||| ||||||||||||||| ||| |||| |||||||| |||||||| |
|
|
| T |
3516953 |
acttatacctacggacaaaattcgtcactaaatgtcattttttcgtaggtaaaagtctagaattcaactattttattgtcaattatacattctccgtagg |
3516854 |
T |
 |
| Q |
244 |
taaatgtcaattt |
256 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
3516853 |
taaatgtctattt |
3516841 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 29236550 - 29236622
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactattt |
217 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||| |||||||||| |
|
|
| T |
29236550 |
acttgtacctacggacaaaatccgtcactaaatgtcatttttccgtaggtaaaagtccagaaatcaactattt |
29236622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 11167177 - 11167120
Alignment:
| Q |
62 |
gcaagtgcatcaaggtccttggcacagggcctcaaacttaaaggggctttaaaatttg |
119 |
Q |
| |
|
||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11167177 |
gcaagtgcatctaggcccttggcacagggcctcaaacttaaaggggcttcaaaatttg |
11167120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 263
Target Start/End: Original strand, 9860125 - 9860244
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtagg |
243 |
Q |
| |
|
|||||||||||| |||||||||| |||| |||| || |||||| ||| ||||||||| |||||||||||| |||| | |||| || ||||||| ||||| |
|
|
| T |
9860125 |
acttgtacctacagacaaaatccttcattaaatatcttttttccgtaggtaaaagtttagaattcaactattttactgtcaatgatgcattgtctgtagg |
9860224 |
T |
 |
| Q |
244 |
taaatgtcaatttgtctgtg |
263 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
9860225 |
taaatgtctatttgtctgtg |
9860244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 251
Target Start/End: Complemental strand, 6120191 - 6120084
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtagg |
243 |
Q |
| |
|
||||||||||| |||||||||| |||| |||||||||||||| | ||| |||| ||||||||||||| |||| | |||| |||||||| ||||| || |
|
|
| T |
6120191 |
acttgtacctatggacaaaatcggtcactaaatgtcatttttccttgggtagaagtccagaattcaactattttactgtcaattatacattatccgtcgg |
6120092 |
T |
 |
| Q |
244 |
taaatgtc |
251 |
Q |
| |
|
|||||||| |
|
|
| T |
6120091 |
taaatgtc |
6120084 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 26304314 - 26304386
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactattt |
217 |
Q |
| |
|
|||| |||||||| |||||||| |||| |||||||||||||||||| |||||||| | |||||||| |||| |
|
|
| T |
26304314 |
acttctacctacgaacaaaatctatcataaaatgtcatttttctgtaggtaaaagtctaaaattcaacaattt |
26304386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 30351293 - 30351220
Alignment:
| Q |
144 |
cacttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactattt |
217 |
Q |
| |
|
|||||| |||||||| |||||||| ||| ||||||||||||| || |||||||| || ||||||||||||| |
|
|
| T |
30351293 |
cacttgcacctacggtcaaaatccatcactaaatgtcattttttcttaggtaaaagtccataattcaactattt |
30351220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 22607433 - 22607389
Alignment:
| Q |
64 |
aagtgcatcaaggtccttggcacagggcctcaaacttaaaggggc |
108 |
Q |
| |
|
||||||||||||| |||||||||| |||| ||||||| ||||||| |
|
|
| T |
22607433 |
aagtgcatcaaggcccttggcacatggccacaaactttaaggggc |
22607389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 41151223 - 41151340
Alignment:
| Q |
147 |
ttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaat-ttcaactatacattgtccgtaggta |
245 |
Q |
| |
|
|||||||| | ||||||||| |||| |||||| ||||| | ||||||||||| | |||||||||||| | || ||||| ||||||||||||||||||| |
|
|
| T |
41151223 |
ttgtacctgcagacaaaatctgtcactaaatgttattttcccataagtaaaagtccggaattcaactatgttatgttcaattatacattgtccgtaggta |
41151322 |
T |
 |
| Q |
246 |
aatgtcaatttgtctgtg |
263 |
Q |
| |
|
|||||| |||||| |||| |
|
|
| T |
41151323 |
aatgtctatttgtttgtg |
41151340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 38703441 - 38703383
Alignment:
| Q |
62 |
gcaagtgcatcaaggtccttggcacagggcctcaaacttaaaggggctttaaaatttgg |
120 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||||| ||||| || | ||||||||| |
|
|
| T |
38703441 |
gcaagtgcatcaaggtccttggcacaaggcttcaaactcaaaggagcctcaaaatttgg |
38703383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 27232473 - 27232417
Alignment:
| Q |
62 |
gcaagtgcatcaaggtccttggcacagggcctcaaacttaaaggggctttaaaatttg |
119 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| ||| |||||||| |||||||| |
|
|
| T |
27232473 |
gcaagtgcatcaagc-ccttggcacagggccttaaagttagaggggcttcaaaatttg |
27232417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 19546648 - 19546580
Alignment:
| Q |
194 |
taaaagttcagaattcaactatttaatttcaactatacattgtccgtaggtaaatgtcaatttgtctgt |
262 |
Q |
| |
|
||||||| ||||||||||||||||| | |||| |||||||||||| ||||||||||| |||||||||| |
|
|
| T |
19546648 |
taaaagtccagaattcaactatttactgtcaattatacattgtccataggtaaatgtatatttgtctgt |
19546580 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 15954324 - 15954441
Alignment:
| Q |
147 |
ttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatt-tcaactatacattgtccgtaggta |
245 |
Q |
| |
|
||||||||||||||| ||| |||| ||||| ||||||||||| ||||||| | ||||||||||||| | | |||| |||||||||| | |||||| |
|
|
| T |
15954324 |
ttgtacctacggacataatatgtcactaaatgcgatttttctgtaggtaaaagcctataattcaactattttactgtcaattatacattgttcataggta |
15954423 |
T |
 |
| Q |
246 |
aatgtcaatttgtctgtg |
263 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
15954424 |
aatgtctatttgtctgtg |
15954441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 32188360 - 32188462
Alignment:
| Q |
147 |
ttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtaggta |
245 |
Q |
| |
|
||||||||| |||||||||| | || |||| |||| |||| ||| |||||| |||| |||||||||| |||| | |||| |||||||||| |||||||| |
|
|
| T |
32188360 |
ttgtacctaaggacaaaatctgccactaaatatcatgtttccgtaggtaaaaattcataattcaactattttactgtcaattatacattgttcgtaggta |
32188459 |
T |
 |
| Q |
246 |
aat |
248 |
Q |
| |
|
||| |
|
|
| T |
32188460 |
aat |
32188462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 235
Target Start/End: Complemental strand, 11113015 - 11112927
Alignment:
| Q |
147 |
ttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatt-tcaactatacattg |
235 |
Q |
| |
|
||||||||||| ||||||||| |||| |||||||||||||| ||| || ||| |||| ||||||| ||||| ||| |||| ||||||||| |
|
|
| T |
11113015 |
ttgtacctacgaacaaaatccatcattaaatgtcatttttc-gtaggtgaaaattcataattcaattattttattgtcaattatacattg |
11112927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 40453292 - 40453257
Alignment:
| Q |
62 |
gcaagtgcatcaaggtccttggcacagggcctcaaa |
97 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40453292 |
gcaagtgcatcaaggcccttggcacagggcctcaaa |
40453257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 32973526 - 32973628
Alignment:
| Q |
156 |
cggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaatt-tcaactatacattgtccgtaggtaaatgtcaat |
254 |
Q |
| |
|
||||||| || ||||| |||||||||||||||||| ||||||| | ||||| ||||||| ||| |||| |||||||| | ||| |||||||||| || |
|
|
| T |
32973526 |
cggacaacattcgtcactaaatgtcatttttctgtagctaaaagtctaaaattctactattttattctcaattatacatttttcgttggtaaatgtctat |
32973625 |
T |
 |
| Q |
255 |
ttg |
257 |
Q |
| |
|
||| |
|
|
| T |
32973626 |
ttg |
32973628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 2461419 - 2461476
Alignment:
| Q |
62 |
gcaagtgcatcaaggtccttggcacagggcctcaaacttaaaggggctttaaaatttg |
119 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| || || |||||| | |||||||| |
|
|
| T |
2461419 |
gcaagtgcatcaaggtccttggcacatggcctctaagtttgaggggcctcaaaatttg |
2461476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 263
Target Start/End: Original strand, 19116686 - 19116804
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtagg |
243 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| |||||||| | || |||||| | ||||||||||||| |||| | |||| |||||||||| ||||| |
|
|
| T |
19116686 |
acttgtacctacggacaaaatctgtcgctaaatttcattttt-tttaggtaaaactccagaattcaactattttactatcaattatacattgtatgtagg |
19116784 |
T |
 |
| Q |
244 |
taaatgtcaatttgtctgtg |
263 |
Q |
| |
|
||||||| |||| |||||| |
|
|
| T |
19116785 |
taaatgtagatttttctgtg |
19116804 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 26618654 - 26618587
Alignment:
| Q |
197 |
aagttcagaattcaactatttaatt-tcaactatacattgtccgtaggtaaatgtcaatttgtctgtg |
263 |
Q |
| |
|
||||| ||||||||||||||| | | |||||||||||||||||||| |||||||| |||||| |||| |
|
|
| T |
26618654 |
aagtttagaattcaactattttactgtcaactatacattgtccgtatataaatgtctatttgtttgtg |
26618587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0426 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0426
Description:
Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 2579 - 2689
Alignment:
| Q |
153 |
ctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaacta-tttaatttcaactatacattgtccgtaggtaaatgtc |
251 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||||||| |||||||| || ||||||| || |||| | |||| |||||||| | ||| ||||||||| |
|
|
| T |
2579 |
ctacggacaaaattcgtcactaa-tgtcatttttctgtaggtaaaagtccaaaattcaattattttactatcaattatacattttatgtatgtaaatgtc |
2677 |
T |
 |
| Q |
252 |
aatttgtctgtg |
263 |
Q |
| |
|
|||||| |||| |
|
|
| T |
2678 |
tatttgtgtgtg |
2689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 8760018 - 8760073
Alignment:
| Q |
145 |
acttgtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagt |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| |||||||| |||| |||||||| |
|
|
| T |
8760018 |
acttgtatctacggacaaaatccgtcactaaatatcatttttttgtaggtaaaagt |
8760073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 30860589 - 30860702
Alignment:
| Q |
149 |
gtacctacggacaaaatccgtcatgaaatgtcatttttctgtaagtaaaagttcagaattcaactatttaattt-caactatacattgtccgtaggtaaa |
247 |
Q |
| |
|
||||| ||||||||| || |||| |||||||||||| ||||| ||||||| ||||||||||||||| | | ||| ||||| ||||||||||||||| |
|
|
| T |
30860589 |
gtaccaacggacaaa-tctgtcactaaatgtcatttt-ctgtagataaaagtctagaattcaactattttactaacaattataccttgtccgtaggtaaa |
30860686 |
T |
 |
| Q |
248 |
tgtcaatttgtctgtg |
263 |
Q |
| |
|
|||| |||||| |||| |
|
|
| T |
30860687 |
tgtctatttgtatgtg |
30860702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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