View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20382_low_22 (Length: 311)
Name: NF20382_low_22
Description: NF20382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20382_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 13 - 291
Target Start/End: Original strand, 31748488 - 31748772
Alignment:
| Q |
13 |
atataaaaacaagttcaaaattacac------aggtaattaactatactcatactcacaaaagtagaatgtgtgaaagcagaacagttaacgaaatggtc |
106 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31748488 |
atataaaaacaagttcaaaattacacaaacacaggtaattaactatactcatactcacaaaagtagaatgtgtgaaagcagaacagttaacgaaatggtc |
31748587 |
T |
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| Q |
107 |
aatgattgattgtatataaataaaataatagtagtggagataaaggtagtaatatatagaagcatatacttgtatagtttctctataaatagaactatat |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
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| T |
31748588 |
aatgattgattgtatataaataaaataatagtagtggagataaaggtagtaatatatagaagcatatacttgtatagtttctctataaatagagccatat |
31748687 |
T |
|
| Q |
207 |
acaagacatattttcatatcaacacagctctaaggtcttttcctctagctgttagacaaatgctaaggaaaggaatcagcccttt |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |
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| T |
31748688 |
acaagacatattttcatatcaacacagctctaaggtcttttcctctagctgttagacaaatgctaagaaatggaatcaccccttt |
31748772 |
T |
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