View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20382_low_28 (Length: 261)
Name: NF20382_low_28
Description: NF20382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20382_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 28693498 - 28693740
Alignment:
| Q |
1 |
tattaacaagtggggtgtaccttctaatcgagtaggaggtgtggtcttcacactgatgaatagattcacttcgactagtcatatgctccttctccaaaca |
100 |
Q |
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| T |
28693498 |
tattaacaagtggggtgtaccttctaatcgagtaggaggtgtggtcttcacactgatgaacagattcactgcgactagtcatatgctccttctccaaaca |
28693597 |
T |
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| Q |
101 |
ggggaaccagggtatgcttgtccaaataagtaaggtgctggtagatcgatatcaatacaagtaaaagtgggatgagtaatatatgtgtgatcatacatgt |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28693598 |
gggga----gggtatgcttgtccaaataagtaaggtgctggtagatcgatatcaatacaagtaaaagtgggatgagtaatatatgtgtgatcatacatgc |
28693693 |
T |
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| Q |
201 |
aaggagacactctatttatagtgatgtatctgatgatgtgctctgtg |
247 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
28693694 |
aaggagacactttatttatagtgatgtatctgatgatgtgctctgtg |
28693740 |
T |
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