View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20383_low_10 (Length: 276)
Name: NF20383_low_10
Description: NF20383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20383_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 33372559 - 33372300
Alignment:
| Q |
1 |
ttttgaattgtattctaaaaaatatattatctgaaaagcctttagttgtattatattctgtttgactatattttcttaaaatgtttaagcaataaaaatt |
100 |
Q |
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| T |
33372559 |
ttttgaattgtattctgaaaaatatattatctgaaaagactttagttgtattatattctgtttgactatattttcttaaaatgtttaagcaataaaaatt |
33372460 |
T |
|
| Q |
101 |
acaatttgcattgttttagttagactttgtgtttccagaaaaagttatacgcacattataatacatcacatttattttcttcttcattttacaatggaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
33372459 |
acaatttgcattgttttagttagactttgtgtttccagaaaaagttataagcacattataatacatcacaattattttcttcttcattttacaatggaag |
33372360 |
T |
|
| Q |
201 |
aatgaaatattgatatattttagtttgaatagaacaaaatacattatacatgagatatat |
260 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33372359 |
aatgaaatattgatatattttagtttgaatagaacaaaatacattatacatgagatatat |
33372300 |
T |
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