View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_high_157 (Length: 309)
Name: NF20384_high_157
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_high_157 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 45068439 - 45068732
Alignment:
| Q |
1 |
gttattggatcaagtctcaatctctttgcttagaggttgaggttgaggttagtatacgtcaaacaaatatcgacaatgtcttcgacggtgtagcccaatg |
100 |
Q |
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|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
45068439 |
gttattggatcaagtctcaatctcttcgctttgaggttgaggttgaggttagtatacgtcaaacaaatatcgacaatgtctttgacggtgtagcccaatg |
45068538 |
T |
|
| Q |
101 |
ataagggttaggaaaccgaaggagttctatgtagcaagttcagagttcgatccctgcgacaaacatttctccctcctcttaactaattaatcactaacat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
45068539 |
ataagggttaggaaaccgaaggagttctatgtagcaagttcagagttcgatccctgcgacaaacatttctccctccccttaactaattaatcactaacat |
45068638 |
T |
|
| Q |
201 |
ttgcctatnnnnnnngaatatcaacaattaatgttaaaagaaattgtatttggtcaatactcaatgacaagttctgttttgatgagtgatgagt |
294 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068639 |
ttgcctataaaaaaagaatatcaacaattaatgttaaaagaaattgtatttggtcaatactcaatgacaagttctgttttgatgagtgatgagt |
45068732 |
T |
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