View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_high_175 (Length: 283)
Name: NF20384_high_175
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_high_175 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 37073852 - 37074104
Alignment:
| Q |
14 |
agagaggtgtgaatttaaatgaatcaaggatgaaaatacactcatacgcggtgagtgatatccttcaatcgataatggctttagaaatattgattcatta |
113 |
Q |
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| T |
37073852 |
agagaggtgtgaatttaaatgaatcaaggatgaaaatacactcatacgcggtgagtgatatccttcaatcgataatggctttagaaatattgattcatta |
37073951 |
T |
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| Q |
114 |
gaataacctacaactataacctatttttcttatgaaacaagctacgtaccctacccaaacaataagatctaaaatctaccaatttcacaaactgttttta |
213 |
Q |
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| T |
37073952 |
gaataacctacaactataacctatttttcttatgaaacaagctacgtaccctacccaaacaataagatctaaaatctaccaatttcacaaactgttttta |
37074051 |
T |
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| Q |
214 |
tcatcaacataggaagatctcttttctatacactccaacaatttcctaagatt |
266 |
Q |
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| T |
37074052 |
tcatcaacataggaagatctcttttctatacactccagcaatttcctaagatt |
37074104 |
T |
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