View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20384_high_217 (Length: 248)

Name: NF20384_high_217
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20384_high_217
NF20384_high_217
[»] chr5 (22 HSPs)
chr5 (13-243)||(18765443-18765673)
chr5 (74-188)||(31575659-31575773)
chr5 (81-176)||(30761660-30761754)
chr5 (109-179)||(3195363-3195432)
chr5 (109-179)||(30764507-30764576)
chr5 (98-159)||(33552397-33552457)
chr5 (98-179)||(7271294-7271376)
chr5 (111-179)||(26548364-26548431)
chr5 (111-179)||(26551923-26551990)
chr5 (109-179)||(2453564-2453633)
chr5 (109-179)||(19686452-19686521)
chr5 (109-179)||(28562140-28562209)
chr5 (109-179)||(28565708-28565777)
chr5 (109-179)||(34652535-34652604)
chr5 (98-179)||(21332449-21332531)
chr5 (109-179)||(19689835-19689904)
chr5 (81-158)||(7625352-7625429)
chr5 (98-159)||(10629479-10629539)
chr5 (74-158)||(4099323-4099406)
chr5 (98-179)||(28787094-28787176)
chr5 (98-158)||(30066587-30066646)
chr5 (98-159)||(21335490-21335550)
[»] chr3 (27 HSPs)
chr3 (50-188)||(27298323-27298461)
chr3 (55-188)||(27307884-27308018)
chr3 (81-171)||(281966-282056)
chr3 (109-179)||(2784390-2784459)
chr3 (81-179)||(42354178-42354275)
chr3 (109-188)||(3306134-3306213)
chr3 (109-179)||(25888247-25888316)
chr3 (109-159)||(30157827-30157876)
chr3 (74-179)||(10902277-10902383)
chr3 (98-158)||(47051847-47051907)
chr3 (109-159)||(2279415-2279464)
chr3 (109-179)||(54735979-54736048)
chr3 (74-159)||(10881817-10881901)
chr3 (98-159)||(31549545-31549605)
chr3 (98-159)||(41977362-41977422)
chr3 (98-159)||(52200267-52200327)
chr3 (98-158)||(20728419-20728478)
chr3 (98-179)||(28007830-28007912)
chr3 (109-179)||(10960171-10960244)
chr3 (109-179)||(10963678-10963751)
chr3 (104-159)||(47055283-47055338)
chr3 (109-179)||(4250670-4250738)
chr3 (109-179)||(18883496-18883565)
chr3 (109-142)||(10967187-10967220)
chr3 (98-142)||(10885216-10885260)
chr3 (98-179)||(52309383-52309465)
chr3 (98-158)||(54461362-54461421)
[»] chr2 (22 HSPs)
chr2 (74-180)||(35521137-35521242)
chr2 (81-188)||(45457393-45457502)
chr2 (109-179)||(13518573-13518642)
chr2 (81-179)||(34682928-34683026)
chr2 (81-179)||(45454105-45454205)
chr2 (98-179)||(43723958-43724040)
chr2 (109-179)||(1503200-1503269)
chr2 (109-179)||(1506404-1506473)
chr2 (81-159)||(36808239-36808317)
chr2 (98-158)||(31427338-31427398)
chr2 (109-188)||(15719043-15719121)
chr2 (109-179)||(11060069-11060138)
chr2 (98-159)||(5666775-5666835)
chr2 (98-159)||(15470716-15470776)
chr2 (109-158)||(26366183-26366231)
chr2 (74-179)||(6827005-6827111)
chr2 (98-179)||(25138702-25138784)
chr2 (98-158)||(25820641-25820700)
chr2 (113-188)||(15703739-15703813)
chr2 (98-188)||(13137146-13137237)
chr2 (109-142)||(38460629-38460662)
chr2 (98-158)||(13971699-13971758)
[»] chr6 (19 HSPs)
chr6 (86-192)||(24371472-24371578)
chr6 (109-179)||(14966501-14966570)
chr6 (109-179)||(6514273-6514346)
chr6 (109-179)||(23008337-23008408)
chr6 (109-179)||(23779956-23780027)
chr6 (109-179)||(5617985-5618054)
chr6 (109-179)||(34502623-34502692)
chr6 (74-179)||(10290228-10290334)
chr6 (109-179)||(3826598-3826667)
chr6 (109-179)||(14969981-14970050)
chr6 (109-159)||(20186021-20186070)
chr6 (109-159)||(22149921-22149970)
chr6 (98-159)||(23842585-23842645)
chr6 (101-142)||(23848052-23848093)
chr6 (98-179)||(17106393-17106475)
chr6 (104-179)||(28111577-28111655)
chr6 (81-179)||(5260059-5260160)
chr6 (109-174)||(7559864-7559930)
chr6 (109-188)||(11192348-11192428)
[»] chr8 (21 HSPs)
chr8 (92-188)||(14589387-14589483)
chr8 (109-179)||(30645756-30645825)
chr8 (109-179)||(31981631-31981700)
chr8 (98-158)||(33883146-33883206)
chr8 (109-179)||(14188442-14188511)
chr8 (109-179)||(31986558-31986627)
chr8 (81-179)||(37681292-37681394)
chr8 (104-179)||(23644090-23644164)
chr8 (104-158)||(14422012-14422065)
chr8 (98-159)||(5980088-5980148)
chr8 (98-159)||(41836233-41836294)
chr8 (104-188)||(5538535-5538620)
chr8 (113-188)||(18695744-18695818)
chr8 (81-179)||(45155041-45155142)
chr8 (113-159)||(4868529-4868575)
chr8 (109-159)||(5964527-5964576)
chr8 (109-179)||(20262826-20262895)
chr8 (109-179)||(21049456-21049525)
chr8 (98-179)||(25231346-25231429)
chr8 (98-179)||(36710409-36710493)
chr8 (74-179)||(12583260-12583366)
[»] scaffold0034 (1 HSPs)
scaffold0034 (98-189)||(48172-48263)
[»] chr4 (26 HSPs)
chr4 (81-179)||(33927221-33927319)
chr4 (67-188)||(33493447-33493568)
chr4 (109-179)||(10248097-10248166)
chr4 (109-179)||(10386215-10386284)
chr4 (109-179)||(18860049-18860118)
chr4 (81-188)||(56199102-56199211)
chr4 (81-179)||(15404855-15404955)
chr4 (98-158)||(3797611-3797671)
chr4 (98-179)||(12786388-12786470)
chr4 (98-158)||(15811932-15811992)
chr4 (109-179)||(11702354-11702423)
chr4 (109-179)||(17670583-17670652)
chr4 (98-159)||(3720626-3720686)
chr4 (109-179)||(26060779-26060851)
chr4 (98-179)||(19820980-19821062)
chr4 (98-181)||(5677190-5677272)
chr4 (98-179)||(15445129-15445211)
chr4 (81-188)||(56195775-56195884)
chr4 (98-159)||(11649244-11649305)
chr4 (98-179)||(19827687-19827769)
chr4 (98-179)||(35510257-35510339)
chr4 (98-142)||(37103020-37103064)
chr4 (104-158)||(52006318-52006371)
chr4 (98-159)||(15429641-15429702)
chr4 (98-159)||(15436255-15436316)
chr4 (98-179)||(40795278-40795360)
[»] chr7 (20 HSPs)
chr7 (109-180)||(5796815-5796886)
chr7 (109-179)||(8258169-8258238)
chr7 (109-179)||(8398101-8398170)
chr7 (109-179)||(11825134-11825203)
chr7 (109-179)||(22232405-22232474)
chr7 (109-179)||(22254265-22254334)
chr7 (109-179)||(23776171-23776241)
chr7 (109-179)||(26153435-26153504)
chr7 (81-158)||(11397852-11397929)
chr7 (109-179)||(5826487-5826556)
chr7 (98-159)||(35961363-35961423)
chr7 (98-179)||(10345439-10345521)
chr7 (98-158)||(17731083-17731142)
chr7 (98-159)||(22257518-22257578)
chr7 (98-159)||(26557762-26557822)
chr7 (55-179)||(24918401-24918524)
chr7 (98-158)||(48645730-48645789)
chr7 (109-159)||(23467067-23467116)
chr7 (109-179)||(44363606-44363675)
chr7 (98-158)||(4695744-4695803)
[»] scaffold0737 (1 HSPs)
scaffold0737 (109-179)||(7118-7188)
[»] scaffold0233 (1 HSPs)
scaffold0233 (71-189)||(10179-10297)
[»] scaffold0014 (2 HSPs)
scaffold0014 (109-179)||(223990-224059)
scaffold0014 (109-179)||(228916-228985)
[»] scaffold0002 (3 HSPs)
scaffold0002 (86-179)||(99008-99102)
scaffold0002 (81-159)||(118243-118321)
scaffold0002 (109-186)||(468224-468301)
[»] chr1 (9 HSPs)
chr1 (98-179)||(2405787-2405869)
chr1 (98-155)||(42022906-42022962)
chr1 (98-158)||(21018254-21018313)
chr1 (98-155)||(29643021-29643077)
chr1 (74-142)||(41058104-41058172)
chr1 (109-180)||(34064935-34065006)
chr1 (98-158)||(21110945-21111004)
chr1 (81-188)||(30938328-30938436)
chr1 (81-129)||(37183689-37183737)
[»] scaffold0996 (1 HSPs)
scaffold0996 (81-179)||(1692-1793)
[»] scaffold1063 (1 HSPs)
scaffold1063 (98-158)||(2763-2822)
[»] scaffold0080 (1 HSPs)
scaffold0080 (98-158)||(27387-27446)
[»] scaffold0062 (2 HSPs)
scaffold0062 (109-188)||(67600-67678)
scaffold0062 (113-188)||(52651-52725)
[»] scaffold0360 (2 HSPs)
scaffold0360 (109-179)||(6556-6625)
scaffold0360 (109-159)||(2724-2773)
[»] scaffold0214 (3 HSPs)
scaffold0214 (109-159)||(13888-13937)
scaffold0214 (109-179)||(20338-20407)
scaffold0214 (109-159)||(27904-27953)
[»] scaffold0045 (1 HSPs)
scaffold0045 (81-158)||(90019-90095)
[»] scaffold0757 (1 HSPs)
scaffold0757 (104-158)||(5634-5687)
[»] scaffold1755 (1 HSPs)
scaffold1755 (97-142)||(408-453)
[»] scaffold0520 (1 HSPs)
scaffold0520 (98-158)||(1336-1395)
[»] scaffold0015 (1 HSPs)
scaffold0015 (98-142)||(198420-198464)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-158)||(248796-248855)


Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 18765673 - 18765443
Alignment:
Q  13 gcataggaaataggtgcagtttaccaaacgaaaaatcgactccctagggcaaccccccaactttatatatccgagataataacaatattgttaaactgag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18765673 gcataggaaataggtgcagtttaccaaacgaaaaatcgactccctagggcaaccccccaactttacatatccgagataataacaatattgttaaactgag 18765574  T
Q  113 attaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatcaccttttgtcacaagttcccagttt 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  18765573 attaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtatacttgctaaatagctatcaccttttatcgcaagttcccagttt 18765474  T
Q  213 ctacaacattttagatgcaaatatcttatga 243  Q
    |||||||||||||||||||||||||||||||    
T  18765473 ctacaacattttagatgcaaatatcttatga 18765443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 31575659 - 31575773
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacactt 173  Q
    |||| |||||| ||||||||||  ||||||| || ||||||||| || ||||| || || |||||||||  |||||||||||||||||||||||||||||    
T  31575659 tttacatatcctagataataacgttattgttcaattgagattaatacggtccttgtggaaacgaacttatttttattacttcgataaaattagtacactt 31575758  T
Q  174 gctaaatagctatca 188  Q
    | |||||| ||||||    
T  31575759 gttaaatatctatca 31575773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 30761660 - 30761754
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgct 176  Q
    |||| ||||| ||||  |||||||||  ||||||||||||||||||||| ||||||||||||  |||||||||||||||   ||||||||||||||    
T  30761660 atcctagatattaactttattgttaagttgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgct 30761754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 3195363 - 3195432
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  3195363 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 3195432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 30764507 - 30764576
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  30764507 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 30764576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 33552397 - 33552457
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  33552397 tattgttaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 33552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 7271294 - 7271376
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  7271294 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 7271376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 26548364 - 26548431
Alignment:
Q  111 agattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  26548364 agattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 26548431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 26551923 - 26551990
Alignment:
Q  111 agattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  26551923 agattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 26551990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 2453564 - 2453633
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||||||||   |||||||||||||||||    
T  2453564 tgagattaacacagtcctcgtggatacaaactta-ttttattacttcgatagttttagtacacttgctaaa 2453633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 19686452 - 19686521
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||| ||||||||||   |||||||||||||||||    
T  19686452 tgagattaacacagtcctcgtggatacgaactta-ttttactacttcgatagttttagtacacttgctaaa 19686521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 28562209 - 28562140
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||| ||  |||||||||||||||   |||||||||||||||||    
T  28562209 tgagattaacacagtcctcgtggatacgaaccta-ttttattacttcgatagttttagtacacttgctaaa 28562140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 28565777 - 28565708
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||| ||  |||||||||||||||   |||||||||||||||||    
T  28565777 tgagattaacacagtcctcgtggatacgaaccta-ttttattacttcgatagttttagtacacttgctaaa 28565708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 34652604 - 34652535
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||||||||   |||||||||||||||||    
T  34652604 tgagattaacacagtcctcgtggatacaaactta-ttttattacttcgatagttttagtacacttgctaaa 34652535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 21332531 - 21332449
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  21332531 tattgctaaattgaaattaacacagtcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 21332449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 19689835 - 19689904
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||| ||||| ||||||||||||  |||| ||||||||||   |||||||||||||||||    
T  19689835 tgagattaacacagtgctcgtggatacgaactta-ttttactacttcgatagttttagtacacttgctaaa 19689904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 7625352 - 7625429
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| |||||||||||   |||| |||||||||    
T  7625352 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaactttattttactacttcgat 7625429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 10629479 - 10629539
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||||||||| ||||||||||||||||||| | ||||| ||||||  |||||||||||||||    
T  10629479 tattgttaaattgagattaacacagtcctcatggatacaaactta-ttttattacttcgata 10629539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 158
Target Start/End: Complemental strand, 4099406 - 4099323
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||||||||| | ||| | ||  ||||| |||| ||| ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  4099406 tttatatatcctaaatatttactttattgctaaattgatattaacacagtcctcgtggatacgaactta-ttttattacttcgat 4099323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 28787176 - 28787094
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||| |||||| |||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  28787176 tattgctaaattgagactaacacggtcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 28787094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 30066587 - 30066646
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||||| ||||||||| ||  ||||||||||||||    
T  30066587 tattgctaaattgagattaacacagtcctcgtggatacgaaccta-ttttattacttcgat 30066646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 21335550 - 21335490
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||| ||||||||||||||||| ||||| ||||||  |||||||||||||||    
T  21335550 tattgctaaattgaaattaacacagtcctcgtggatacaaactta-ttttattacttcgata 21335490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 27298461 - 27298323
Alignment:
Q  50 gactccctagggcaaccccccaactttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttat 149  Q
    |||| |||||||||||||||||| ||||  |||||||||| ||||||||| |  |||| ||||||||||||| ||| ||| |||||||||| ||| ||||    
T  27298461 gactgcctagggcaaccccccaattttacgtatccgagatgataacaataatactaaattgagattaacacaatccccgtggatacgaactcagaattat 27298362  T
Q  150 tacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  27298361 tacttcgataaaattagtacagttgctaaatatctatca 27298323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 27308018 - 27307884
Alignment:
Q  55 cctagggcaacccccc-aactttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattact 153  Q
    ||||||| |||||||| || |||| ||||||||||||||||||||| |  |||||||||||||||||| || |  | |||||||||||||| ||||||||    
T  27308018 cctagggaaacccccctaattttacatatccgagataataacaataatactaaactgagattaacacaatctttatggatacgaacttagaattattact 27307919  T
Q  154 tcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||||||||||| |||||||||||| ||||||    
T  27307918 tcgataaaattagtaaacttgctaaatatctatca 27307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 282056 - 281966
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacac 171  Q
    |||| |||||||||  |||||| |||  ||||||||||||||||||| | |||||||||||||| |||||||||||||| ||||| |||||    
T  282056 atcctagataataatcatattgctaatttgagattaacacagtcctcttggatacgaacttagaattattacttcgatagaattaatacac 281966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 2784390 - 2784459
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  2784390 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 2784459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 42354275 - 42354178
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||| ||||| ||||  |||||||||  ||||||| ||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  42354275 atcctagatattaactttattgttaagttgagattgacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 42354178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 3306134 - 3306213
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata-aaattagtacacttgctaaatagctatca 188  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||   ||| |||||||||| ||||| ||||||    
T  3306134 tgagattaacacagtcctcgtggatacgaactta-atttattacttcgatagttattggtacacttgccaaatatctatca 3306213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 25888316 - 25888247
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||| ||||||||||    
T  25888316 tgagattaacacagtcctcgtcgatacgaactta-ttttattacttcgatagttttagtatacttgctaaa 25888247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 30157876 - 30157827
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  30157876 tgagattaacacagtcctcgtggatacgaactta-atttattacttcgata 30157827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 10902277 - 10902383
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacac 171  Q
    ||||||||||| | ||| | ||  ||||| |||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||| |   |||||||||    
T  10902277 tttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttagatacatttttagtacac 10902375  T
Q  172 ttgctaaa 179  Q
    ||||||||    
T  10902376 ttgctaaa 10902383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 47051847 - 47051907
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||||  ||||||||||||||    
T  47051847 tattgctaaattgagattaacatagtcctcgtggatacgaacttaattttattacttcgat 47051907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 2279464 - 2279415
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  2279464 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 2279415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 54736048 - 54735979
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||| ||||||| ||||||||||||  ||||| ||||||||||  ||| |||||||||||||    
T  54736048 tgagattaacacaatcctcgtggatacgaactta-ttttataacttcgataattttaatacacttgctaaa 54735979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 10881817 - 10881901
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||| | ||| | ||  ||||| |||| ||| ||||||||||||||||| ||||||||||||  |||||||||||||||    
T  10881817 tttatatatcctaaatatttactttattgctaaattgatattaacacagtcctcgtggatacgaactta-ttttattacttcgata 10881901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 31549545 - 31549605
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| |||||||||||||||| |||| ||||||||||||  |||||||||||||||    
T  31549545 tattgctaaattgagattaacacagtcatcgtggatacgaactta-ttttattacttcgata 31549605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 41977362 - 41977422
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| | ||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  41977362 tattgctaaattaagattaacacagtcctcgtagatacaaactta-ttttattacttcgata 41977422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 52200267 - 52200327
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||  |||||||||||||||    
T  52200267 tattgctaaattgaaattaacacagtcctcgtggatacgaactta-ttttattacttcgata 52200327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 20728478 - 20728419
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  20728478 tattgctaaattgagattaacacagtcctcatggatacgaactta-ttttattacttcgat 20728419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 28007912 - 28007830
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||||  ||||| ||||||||  | | |||||||||||||||||    
T  28007912 tattgctaaattgagattaacatagtcctcgtggatacgaactta-ttttatcacttcgatgcatatttagtacacttgctaaa 28007830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 10960171 - 10960244
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaac---ttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||||||||   |||  |||||||||||||||   ||||||| |||||||||    
T  10960171 tgagattaacacagtcctcgtggatacgaacttattatttttattacttcgatagttttagtacgcttgctaaa 10960244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 10963678 - 10963751
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaac---ttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||||||||   |||  |||||||||||||||   ||||||| |||||||||    
T  10963678 tgagattaacacagtcctcgtggatacgaacttattatttttattacttcgatagttttagtacgcttgctaaa 10963751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 47055283 - 47055338
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||| ||||||||||||| ||||||| ||||||||| ||  |||||||||||||||    
T  47055283 taaattgagattaacacaatcctcgtggatacgaacctaattttattacttcgata 47055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 4250670 - 4250738
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| | |||||| |||  |||||||||||||||   |||||||||||||||||    
T  4250670 tgagattaacacagtcctcgtgg-tacgaatttat-tttattacttcgatagttttagtacacttgctaaa 4250738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 18883496 - 18883565
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||||||||  |||||||||||  |||| ||||| ||||   |||||||||||||||||    
T  18883496 tgagattaacacagtcctcgtgaatacgaactta-ttttactactttgatagttttagtacacttgctaaa 18883565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 10967187 - 10967220
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||||||||||||||||||| ||||||||||||    
T  10967187 tgagattaacacagtcctcgtggatacgaactta 10967220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 10885216 - 10885260
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||| |||| ||||||||||||||||||||| ||||| ||||||    
T  10885216 tattgctaaattgagattaacacagtcctcgtggatacaaactta 10885260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 52309465 - 52309383
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||| |||||||  |||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  52309465 tattgctaaattgaaattaacattgtcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 52309383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 54461362 - 54461421
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||| ||| || |||||||||||||||||  ||||||||||||||    
T  54461362 tattgctaaattgagattaatacattcttcgtagatacgaactta-ttttattacttcgat 54461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 35521242 - 35521137
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacactt 173  Q
    |||||| |||||||||||||||||||||| |||| ||| |||||| |||| |||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  35521242 tttatacatccgagataataacaatattgctaaattgatattaacgcagttctcgtagatacgaatttatatttattacttcgat-aaattagtacactt 35521144  T
Q  174 gctaaat 180  Q
    |||||||    
T  35521143 gctaaat 35521137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 45457393 - 45457502
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaa 178  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||  | | ||||||||||||||||    
T  45457393 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatatttagtacacttgctaa 45457492  T
Q  179 atagctatca 188  Q
    | | ||||||    
T  45457493 aaatctatca 45457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 13518573 - 13518642
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  13518573 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 13518642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 34682928 - 34683026
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||| ||||| ||||| ||||| |||| |||||||| || ||||||||| ||||||||||||  ||||||| ||| ||| |||||||||||||| ||||    
T  34682928 atcctagatattaacactattgctaaattgagattaccatagtcctcgtggatacgaacttatttttattatttctatagaattagtacacttgttaaa 34683026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 45454105 - 45454205
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaa 178  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| ||||| ||||||  ||||||||||||||  | | ||||||||||||||||    
T  45454105 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaacttaattttattacttcgatgcatatttagtacacttgctaa 45454204  T
Q  179 a 179  Q
    |    
T  45454205 a 45454205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 43723958 - 43724040
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  43723958 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatatatttttagtacacttgctaaa 43724040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 1503269 - 1503200
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||||||| |||  |||||||||||||||   |||||||||||||||||    
T  1503269 tgagattaacacagtcctcgtggatacgaattta-ttttattacttcgatagttttagtacacttgctaaa 1503200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 1506473 - 1506404
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||||||| |||  |||||||||||||||   |||||||||||||||||    
T  1506473 tgagattaacacagtcctcgtggatacgaattta-ttttattacttcgatagttttagtacacttgctaaa 1506404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 36808317 - 36808239
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||| ||||| ||||  ||||| |||| ||||||||| ||||||||||| ||||||||||||  |||||||||||||||    
T  36808317 atcctagatattaaccttattgctaaattgagattaatacagtcctcgtggatacgaacttaattttattacttcgata 36808239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 31427398 - 31427338
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| |||||||||||||||| |||| ||||||||||||  ||||||||||||||    
T  31427398 tattgctaaattgagattaacacagtcttcgtggatacgaacttaattttattacttcgat 31427338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 15719121 - 15719043
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||| |||   |||||||||||| |||| | ||||||    
T  15719121 tgagattaacacagtcctcgtggatacgaactta-ttttattacttccatagttttagtacacttggtaaaaatctatca 15719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 11060069 - 11060138
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||| ||||| ||||||||||||  |||||||||||||||   |||||||| ||||||||    
T  11060069 tgagattaacacagttctcgtggatacgaactta-ttttattacttcgatagttttagtacatttgctaaa 11060138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 5666775 - 5666835
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| |||||| ||| |||||||||||||||||||||||  |||||||||||||||    
T  5666775 tattgctaaattgagatcaacgcagtcctcgtagatacgaactta-ttttattacttcgata 5666835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 15470716 - 15470776
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||  |||||||||||||||    
T  15470716 tattgctaaattgaaattaacacagtcctcgtggatacgaactta-ttttattacttcgata 15470776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 26366183 - 26366231
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  26366183 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgat 26366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 6827005 - 6827111
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacac 171  Q
    ||||||||||| | ||| | ||  ||||| |||| ||||||||||||||||||||| |||| |||||||  |||||||||| |||  ||  |||||||||    
T  6827005 tttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatatgaactta-ttttattactttgatgcaattttagtacac 6827103  T
Q  172 ttgctaaa 179  Q
    ||||||||    
T  6827104 ttgctaaa 6827111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 25138784 - 25138702
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||| | ||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  25138784 tattgctaaattgagattaacacatttctcgtggatacgaactta-ttttattacttcgatatatttttagtacacttgctaaa 25138702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 25820700 - 25820641
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  25820700 tattgctaaattgaaattaacacagtcctcgtggatacgaactta-ttttattacttcgat 25820641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 15703813 - 15703739
Alignment:
Q  113 attaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||| ||||||||| ||||||||||||  |||||||||||||||   ||||| ||||||||||| | ||||||    
T  15703813 attaacatagtcctcgtggatacgaactta-ttttattacttcgatagttttagtgcacttgctaaaaatctatca 15703739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 13137146 - 13137237
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaaatagctatca 188  Q
    ||||| |||| ||||||||| ||||||||||| ||||||||||||  ||||||| ||||||  |   ||||||||||||||||| | ||||||    
T  13137146 tattgctaaattgagattaagacagtcctcgtggatacgaactta-ttttattatttcgatgcatttttagtacacttgctaaaaatctatca 13137237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 38460662 - 38460629
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||||||||||||||||||||||||| ||||||    
T  38460662 tgagattaacacagtcctcgtagatacaaactta 38460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 13971758 - 13971699
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||| ||||||||| ||||| ||||||  ||||||||||||||    
T  13971758 tattgctaaattgagattaacaaagtcctcgtggataccaactta-ttttattacttcgat 13971699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 24371472 - 24371578
Alignment:
Q  86 agataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagcta 185  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||  |||||||||||| ||||   |||    
T  24371472 agataataacaattttgctaaattgagattaacacagtcctcgtggatacgaacttatttttattacttcgataattttagtacacttgttaaaattcta 24371571  T
Q  186 tcacctt 192  Q
    |||||||    
T  24371572 tcacctt 24371578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 14966501 - 14966570
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  14966501 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 14966570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 6514273 - 6514346
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||||| ||||||||||||||| |   |||||||||||||||   |||||||||||||||||    
T  6514273 tgagattaacacagtccttgtagatacgaacttataaattttattacttcgatagttttagtacacttgctaaa 6514346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 23008337 - 23008408
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata-aaattagtacacttgctaaa 179  Q
    ||||||||||||||||||| | ||||||| |||||||||| ||||||||||  | |||||||||||||||||    
T  23008337 tgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtacacttgctaaa 23008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 23780027 - 23779956
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata-aaattagtacacttgctaaa 179  Q
    ||||||||||||||||||| | ||||||| |||||||||| ||||||||||  | |||||||||||||||||    
T  23780027 tgagattaacacagtcctcatggatacgatcttagatttactacttcgatagtatttagtacacttgctaaa 23779956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 5618054 - 5617985
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||| ||||||  |||||||||||||||   |||||||||||||||||    
T  5618054 tgagattaacacagtcctcgtggatacaaactta-ttttattacttcgatagttttagtacacttgctaaa 5617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 34502623 - 34502692
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||| ||||||||||   |||||||||||||||||    
T  34502623 tgagattaacacagtcctcgtggatacgaactta-ttttactacttcgatagttttagtacacttgctaaa 34502692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 10290228 - 10290334
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacac 171  Q
    ||||||||||| | ||| | ||  ||||| |||| ||||||||||||||||||||| ||||| ||||||  ||||||||||||||| |   |||||||||    
T  10290228 tttatatatcctaaatattcactttattgctaaattgagattaacacagtcctcgtggatacaaactta-ttttattacttcgatacatttttagtacac 10290326  T
Q  172 ttgctaaa 179  Q
    ||||||||    
T  10290327 ttgctaaa 10290334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 3826667 - 3826598
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||||| || ||||||||||||   ||||||||||||||   |||||||||||||||||    
T  3826667 tgagattaacacagtccttgtggatacgaactta-tcttattacttcgatagttttagtacacttgctaaa 3826598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 14969981 - 14970050
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||| ||||||| | ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  14969981 tgagattaacatagtcctcatggatacgaacttat-tttattacttcgatagttttagtacacttgctaaa 14970050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 20186021 - 20186070
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  20186021 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 20186070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 22149970 - 22149921
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  22149970 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 22149921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 23842645 - 23842585
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||| |||||||    
T  23842645 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattatttcgata 23842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 23848052 - 23848093
Alignment:
Q  101 tgttaaactgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  23848052 tgttaaattgagattaacacagtcctcgtggatacgaactta 23848093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 17106475 - 17106393
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    |||||| ||| |||||||||||| ||| |||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  17106475 tattgtgaaattgagattaacactgtcttcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 17106393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 28111655 - 28111577
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgctaaa 179  Q
    |||| |||||||||||||||||  || |||||||||||| |   |||||||||||||||   |||||||||||||||||    
T  28111655 taaattgagattaacacagtccatgtggatacgaacttataaattttattacttcgatagttttagtacacttgctaaa 28111577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 5260059 - 5260160
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgcta 177  Q
    |||| ||||| ||||  ||||| |||| ||||||||||| |||||| || |||||||||||| |   |||||||||||||||   |||||||| ||||||    
T  5260059 atcctagatattaaccttattgctaaattgagattaacatagtccttgtggatacgaacttataaattttattacttcgatagttttagtacatttgcta 5260158  T
Q  178 aa 179  Q
    ||    
T  5260159 aa 5260160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 7559930 - 7559864
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgat-aaaattagtacacttg 174  Q
    ||||||||| |||||| |||| || |||||||||  |||||||||||||| ||| ||||||||||||    
T  7559930 tgagattaaaacagtcttcgtggaaacgaacttatctttattacttcgatcaaatttagtacacttg 7559864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 11192428 - 11192348
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata-aaattagtacacttgctaaatagctatca 188  Q
    |||||||||||| || ||||| || |||||||||  | |||||||||||||    ||||||||||||||||||| ||||||    
T  11192428 tgagattaacacggtactcgtggaaacgaacttaattgtattacttcgatagtttttagtacacttgctaaatatctatca 11192348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 14589483 - 14589387
Alignment:
Q  92 taacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||| ||||| |||| |||||||||||||||||||||  |||||||||||  ||||||||||||||||  ||||||||||||||||| | ||||||    
T  14589483 taacattattgctaaattgagattaacacagtcctcgtgaatacgaacttaattttattacttcgataattttagtacacttgctaaaaatctatca 14589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 30645756 - 30645825
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||||  |||||||||||||||||    
T  30645756 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgataattttagtacacttgctaaa 30645825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 31981631 - 31981700
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||   |||||||||||||||||    
T  31981631 tgagattaacacagtcctcatagatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 31981700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 33883206 - 33883146
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  33883206 tattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgat 33883146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 14188442 - 14188511
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||| |||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  14188442 tgagattaacgcagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 14188511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 31986558 - 31986627
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||||||||  |||||||||||  |||||||||||||||   |||||||||||||||||    
T  31986558 tgagattaacacagtcctcgtgcatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 31986627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 37681394 - 37681292
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctc-gtagatacgaacttaga---tttattacttcgataaaattagtacacttgct 176  Q
    |||| ||||| ||||  |||||||||| ||||||||||||||||| | || ||||| |||||| |   |||||||||||||||  |||||||||||||||    
T  37681394 atcctagatagtaaccttattgttaaattgagattaacacagtcccctgtggatacaaacttataaattttattacttcgatattattagtacacttgct 37681295  T
Q  177 aaa 179  Q
    |||    
T  37681294 aaa 37681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 23644090 - 23644164
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||| |||||||   ||||| |||||||||||    
T  23644090 taaattgagattaacacagtcctcgtggatacgaactta-ttttattatttcgatagttttagttcacttgctaaa 23644164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 14422012 - 14422065
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  14422012 taaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgat 14422065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 5980148 - 5980088
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  5980148 tattgctaaattgagattaacacagtcctcgtggatacgaactta-tgttattacttcgata 5980088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 41836294 - 41836233
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||| | ||||||||||||  ||||||| |||||||    
T  41836294 tattgctaaattgagattaacacagtcctcatggatacgaacttatttttattatttcgata 41836233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 5538620 - 5538535
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaatagctatca 188  Q
    |||| ||| ||||||||||||||| | ||||||||||||  ||||||||||||||| |   ||||||||||||||||| | ||||||    
T  5538620 taaattgaaattaacacagtcctcatggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaaaatctatca 5538535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 18695818 - 18695744
Alignment:
Q  113 attaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||| ||||||||| ||||||||||||  |||||||||||||||   ||||| ||||||||||| | ||||||    
T  18695818 attaacatagtcctcgtggatacgaactta-ttttattacttcgatagttttagtgcacttgctaaaaatctatca 18695744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 45155142 - 45155041
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgcta 177  Q
    |||| ||||| ||||  ||||| |||| |||||||||||| ||||  || |||||||||||| |   |||||||||||||||   |||||||||||||||    
T  45155142 atcctagatattaaccttattgctaaattgagattaacacggtccctgtggatacgaacttataaattttattacttcgatagttttagtacacttgcta 45155043  T
Q  178 aa 179  Q
    ||    
T  45155042 aa 45155041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 4868529 - 4868575
Alignment:
Q  113 attaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||| ||||||| ||||||||||||  |||||||||||||||    
T  4868529 attaacacattcctcgttgatacgaacttatttttattacttcgata 4868575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 5964527 - 5964576
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||| | ||||||||||||  |||||||||||||||    
T  5964527 tgagattaacacagtcctcatggatacgaactta-ttttattacttcgata 5964576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 20262826 - 20262895
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||| |||| ||||||||||||  | |||||||||||||   |||||||||||| ||||    
T  20262826 tgagattaacacagtcttcgtggatacgaactta-ctgtattacttcgatagttttagtacacttgttaaa 20262895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 21049456 - 21049525
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||| |||| ||||||||||||  | |||||||||||||   |||||||||||| ||||    
T  21049456 tgagattaacacagtcttcgtggatacgaactta-ctgtattacttcgatagttttagtacacttgttaaa 21049525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 25231346 - 25231429
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||| |||| |||||||||||||||| | || |||||||||||| |   |||||||||||||||   |||||||||||||||||    
T  25231346 tattgctaaattgagattaacacagtctt-gtggatacgaacttataaaatttattacttcgatagttttagtacacttgctaaa 25231429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 36710493 - 36710409
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||| |||| |||||||||||||||||  || |||||||||||| |   |||||||||| ||||   |||||||||||||||||    
T  36710493 tattgctaaattgagattaacacagtccctgtggatacgaacttataaactttattactttgatagtcttagtacacttgctaaa 36710409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 12583260 - 12583366
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacac 171  Q
    ||||||||||| | ||| | ||  ||||| |||| ||||||||||| ||||||||| ||||| ||||||  ||||||| ||||||| |   |||||||||    
T  12583260 tttatatatcctaaatatttactttattgctaaattgagattaacatagtcctcgtggatacaaactta-ttttattatttcgatacatttttagtacac 12583358  T
Q  172 ttgctaaa 179  Q
    ||||||||    
T  12583359 ttgctaaa 12583366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 48263 - 48172
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatcac 189  Q
    ||||| |||| |||||||||||||||| |||| |||||||||||| |||||||||||| |||   ||||||||||||||||||| |||||||    
T  48263 tattgctaaattgagattaacacagtcatcgtggatacgaacttatatttattacttcaatagttttagtacacttgctaaatatctatcac 48172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 33927221 - 33927319
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  33927221 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatagttttagtacacttgctaaa 33927319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 33493568 - 33493447
Alignment:
Q  67 ccccaactttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattag 166  Q
    |||||| |||| ||||| || |||||||| ||||| ||||| ||| ||||||||| |||||||  ||||||||||||| |||||| ||  ||| || |||    
T  33493568 ccccaattttacatatctgaaataataaccatattcttaaattgaaattaacacaatcctcgtgaatacgaacttagaattattattttaatagaactag 33493469  T
Q  167 tacacttgctaaatagctatca 188  Q
    | ||||||||||||| ||||||    
T  33493468 tgcacttgctaaatatctatca 33493447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 10248097 - 10248166
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  10248097 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 10248166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 10386215 - 10386284
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  10386215 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 10386284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 18860049 - 18860118
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  18860049 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatatttttagtacacttgctaaa 18860118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 56199102 - 56199211
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaa 178  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||  |   ||||||||||||||||    
T  56199102 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgatgcatttttagtacacttgctaa 56199201  T
Q  179 atagctatca 188  Q
    | | ||||||    
T  56199202 aaatctatca 56199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 15404955 - 15404855
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaa 178  Q
    |||| ||||| ||||  ||||| |||| |||||||||||||||| |||| ||||||||||||  ||||||||||||||  | | ||||||||||||||||    
T  15404955 atcctagatattaacgttattgctaaattgagattaacacagtcgtcgtggatacgaacttaattttattacttcgatgcatatttagtacacttgctaa 15404856  T
Q  179 a 179  Q
    |    
T  15404855 a 15404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 3797671 - 3797611
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  3797671 tattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgat 3797611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 12786388 - 12786470
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  12786388 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 12786470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 15811992 - 15811932
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  15811992 tattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgat 15811932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 11702423 - 11702354
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||| |||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  11702423 tgagattaacacagtcttcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 11702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 17670583 - 17670652
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||| ||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  17670583 tgagattaacatagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 17670652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 3720626 - 3720686
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  3720626 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 3720686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 26060779 - 26060851
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||||||||| ||||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  26060779 tgagattaacatagtcctcgtggatacgaacttatttttattacttcgatacatttttagtacacttgctaaa 26060851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 19820980 - 19821062
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  19820980 tattgctaaattgagattaacacaatcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 19821062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 5677272 - 5677190
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaata 181  Q
    ||||| |||| |||||||| |||| ||||||| ||||||||| ||  ||||||||||||||| ||||| ||| |||||||||||    
T  5677272 tattgctaaattgagatta-cacaatcctcgtggatacgaacatatttttattacttcgatagaattactactcttgctaaata 5677190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 15445211 - 15445129
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata-aaattagtacacttgctaaa 179  Q
    ||||| |||| |||||||||  |||||||||| ||||||||||||  |||| ||||||||||  | |||||||||||||||||    
T  15445211 tattgctaaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgatagtatttagtacacttgctaaa 15445129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 56195775 - 56195884
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat--aaaattagtacacttgctaa 178  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||| |||||||  |||||||||||  ||||||||||||||  |   ||||||||||||||||    
T  56195775 atcctagatattaacgttattgctaaattgagattaacacaatcctcgtgaatacgaacttaattttattacttcgatgcatttttagtacacttgctaa 56195874  T
Q  179 atagctatca 188  Q
    | | ||||||    
T  56195875 aaatctatca 56195884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 11649305 - 11649244
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||| | ||||||||||||  ||||||| |||||||    
T  11649305 tattgctaaattgagattaacacagtcctcatggatacgaacttatttttattatttcgata 11649244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 19827687 - 19827769
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||||  ||||||||||||| | |   |||||||||||||||||    
T  19827687 tattgctaaattgagattaacacaatcctcgtggatacgaactta-ttttattacttcgagacatttttagtacacttgctaaa 19827769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 35510257 - 35510339
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||||||||||| |||||||| |||  |||||||||| |||| |   |||||||||||||||||    
T  35510257 tattgctaaattgagattaacacagtcctcgtggatacgaattta-ttttattacttggatacatttttagtacacttgctaaa 35510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 37103064 - 37103020
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||    
T  37103064 tattgctaaattgagattaacacagtcctcgtggatacgaactta 37103020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 52006371 - 52006318
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||| ||||||||||||||||||||| ||||| ||||||  ||||||||||||||    
T  52006371 taaattgagattaacacagtcctcgtggatacaaactta-ttttattacttcgat 52006318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 15429702 - 15429641
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| |||||||||  |||||||||| ||||||||||||  |||| ||||||||||    
T  15429702 tattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgata 15429641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 15436316 - 15436255
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| |||||||||  |||||||||| ||||||||||||  |||| ||||||||||    
T  15436316 tattgataaattgagattaaatcagtcctcgtggatacgaacttatttttactacttcgata 15436255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 40795278 - 40795360
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| |||||||||||||||| |||| ||||| ||| ||  ||||||||||||||| |   |||||||||||||||||    
T  40795278 tattgctaaattgagattaacacagtcttcgtggatacaaac-taattttattacttcgatacatttttagtacacttgctaaa 40795360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 5796815 - 5796886
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaat 180  Q
    |||||||||||||||| |||| ||||||||||||  |||||||||||||||   ||||||||||||||||||    
T  5796815 tgagattaacacagtcttcgtggatacgaacttatttttattacttcgatagttttagtacacttgctaaat 5796886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 8258169 - 8258238
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||   |||||||||||| ||||    
T  8258169 tgagattaacacagtcctcgtagatacgaactta-ttttattacttcgatagttttagtacacttgttaaa 8258238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 8398101 - 8398170
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  8398101 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 8398170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 11825203 - 11825134
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  11825203 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 11825134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 22232474 - 22232405
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  22232474 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 22232405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 22254265 - 22254334
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  22254265 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 22254334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 23776171 - 23776241
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||   |||||| ||||||||||    
T  23776171 tgagattaacacagtcctcgtagaaacgaacttatttttattacttcgatagttttagtatacttgctaaa 23776241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 26153435 - 26153504
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  26153435 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 26153504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 11397929 - 11397852
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  11397929 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacgaacttaattttattacttcgat 11397852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 5826556 - 5826487
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||| |||||||  |||||||||||||||   |||||||||||||||||    
T  5826556 tgagattaacacagtcctcgtggataagaactta-ttttattacttcgatagttttagtacacttgctaaa 5826487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 35961363 - 35961423
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  35961363 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 35961423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 10345439 - 10345521
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  10345439 tattgctaaattgagattaacacaatcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 10345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 17731083 - 17731142
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||  ||||||||||||||    
T  17731083 tattgctaaactgagattaacacagtccttgtggatacgaactta-ttttattacttcgat 17731142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 22257518 - 22257578
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||||||||  ||||||||||||||||||||| ||||||| ||||  |||||||||||||||    
T  22257518 tattgttaagttgagattaacacagtcctcgtggatacgatctta-ttttattacttcgata 22257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 26557762 - 26557822
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||| |||| ||||||||||||||||||||| |||| |||||||  |||||||||||||||    
T  26557762 tattgctaaattgagattaacacagtcctcgtggatatgaactta-ttttattacttcgata 26557822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 24918401 - 24918524
Alignment:
Q  55 cctagggcaaccccccaactttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattactt 154  Q
    ||||||||||||| |||| ||  |  ||||||||| |||||  ||||| |||  ||| ||||||| ||| ||||| ||||||||||| ||||||||||||    
T  24918401 cctagggcaaccctccaatttcgtgcatccgagatcataaccttattgctaatttga-attaacagagttctcgtggatacgaactttgatttattactt 24918499  T
Q  155 cgataaaattagtacacttgctaaa 179  Q
     ||||   |||||| ||||||||||    
T  24918500 tgatagttttagtatacttgctaaa 24918524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 48645730 - 48645789
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  48645730 tattgctaaattgaaattaacacagtcctcgtggatacgaactta-ttttattacttcgat 48645789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 23467116 - 23467067
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||||||||||||||||||||  |||||||||||  |||||||||||||||    
T  23467116 tgagattaacacagtcctcgtgtatacgaactta-ttttattacttcgata 23467067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 44363675 - 44363606
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||| ||||  ||||||||||||  |||||||||||||||   || ||||||||||||||    
T  44363675 tgagattaacacagttctcgaggatacgaactta-ctttattacttcgatatttttggtacacttgctaaa 44363606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 4695744 - 4695803
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| | ||||||||||||||||||| ||||| ||||||  ||||||||||||||    
T  4695744 tattgctaaatttagattaacacagtcctcgtggatacaaactta-ttttattacttcgat 4695803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Complemental strand, 7188 - 7118
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||| |||||||| ||||||||||||  |||||||||||||||   |||||||||||||||||    
T  7188 tgagattaacaccgtcctcgtggatacgaacttatttttattacttcgatagttttagtacacttgctaaa 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 10179 - 10297
Alignment:
Q  71 aactttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtaca 170  Q
    ||||||| | |||| | |||||||| |||||| |||| ||||||||| | ||||||||| || || ||||||  |||||||||| ||||   ||||||||    
T  10179 aactttacacatcctatataataaccatattgctaaattgagattaatagagtcctcgtggaaacaaacttatttttattactttgatagttttagtaca 10278  T
Q  171 cttgctaaatagctatcac 189  Q
    ||||||||||| |||||||    
T  10279 cttgctaaatatctatcac 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 223990 - 224059
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||   |||||||||||||||||    
T  223990 tgagattaacacagtcctcatagatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 224059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 228916 - 228985
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    |||||||||||||||||||||  |||||||||||  |||||||||||||||   |||||||||||||||||    
T  228916 tgagattaacacagtcctcgtgcatacgaactta-ttttattacttcgatagttttagtacacttgctaaa 228985  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 99102 - 99008
Alignment:
Q  86 agataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataa-aattagtacacttgctaaa 179  Q
    ||||||||||  ||||| |||| ||||||||||||  |||||||||||||||| |||  ||||||||||||||||   |||||||||||||||||    
T  99102 agataataactttattgctaaattgagattaacaccatcctcgtagatacgaaattatttttattacttcgataatttttagtacacttgctaaa 99008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 118321 - 118243
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||| ||||||||||  ||||||| || ||||||||||||| ||||||| ||||||||||||  |||||||||||||||    
T  118321 atcctagataataactttattgttgaattgagattaacacaatcctcgtggatacgaacttatttttattacttcgata 118243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 468301 - 468224
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctat 186  Q
    ||||||||||||||| ||| | ||||| |||||||| |||||||||| ||| | |||||| ||||| |||||| ||||    
T  468301 tgagattaacacagtactcattgatacaaacttagaattattacttcaatagatttagtatacttgttaaatatctat 468224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 2405787 - 2405869
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaa--attagtacacttgctaaa 179  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||| |   |||||||||||||||||    
T  2405787 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgatacatttttagtacacttgctaaa 2405869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 42022906 - 42022962
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttc 155  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||    
T  42022906 tattgttaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttc 42022962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 21018313 - 21018254
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||||||||| |||| |||||||||||||||| ||||||||||||  ||||||||||||||    
T  21018313 tattgttaaattgaggttaacacagtcctcgtggatacgaactta-ttttattacttcgat 21018254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 29643077 - 29643021
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttc 155  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  |||||||||||    
T  29643077 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttc 29643021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 41058172 - 41058104
Alignment:
Q  74 tttatatatccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||||||||| | ||| | ||  ||||| |||| ||||||||||||||||||||| ||||||||||||    
T  41058172 tttatatatcctaaatatttactttattgctaaattgagattaacacagtcctcgtggatacgaactta 41058104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 34065006 - 34064935
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaat 180  Q
    ||||||||||||| || || | ||||||||||| |||||||||||| |||||  | ||||||||| ||||||    
T  34065006 tgagattaacacaatcttcatggatacgaactttgatttattactttgataatttcagtacacttcctaaat 34064935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 21111004 - 21110945
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||| ||||||||||||||| ||||||||| ||  ||||||||||||||    
T  21111004 tattgctaaattgagagtaacacagtcctcgtggatacgaacata-ttttattacttcgat 21110945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 30938436 - 30938328
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagattt-attacttcgataaaattagtacacttgctaaa 179  Q
    |||| ||||| ||||  ||||||||| || |||||||| || || |  |||||| |||||||  ||| |||||||| ||| ||||||||||||| |||||    
T  30938436 atcctagatagtaaccttattgttaatctaagattaacgcaatctttatagatatgaacttaatttttattacttcaatagaattagtacacttactaaa 30938337  T
Q  180 tagctatca 188  Q
    || ||||||    
T  30938336 tatctatca 30938328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 37183737 - 37183689
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgt 129  Q
    |||| ||||| ||||| ||||| |||| |||||||||||||||||||||    
T  37183737 atcctagatattaacattattgctaaattgagattaacacagtcctcgt 37183689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 179
Target Start/End: Complemental strand, 1793 - 1692
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttaga---tttattacttcgataaaattagtacacttgcta 177  Q
    |||| ||||| ||||  ||||| |||| |||||||||||||||||| || |||||||||||| |   |||||||||||||||   |||||||||||||||    
T  1793 atcctagatattaaccttattgctaaattgagattaacacagtccttgtggatacgaacttataaattttattacttcgatagttttagtacacttgcta 1694  T
Q  178 aa 179  Q
    ||    
T  1693 aa 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 2763 - 2822
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  2763 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgat 2822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 27387 - 27446
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  27387 tattgctaaattgagattaacacagtcctcgtggatacgaactta-ttttattacttcgat 27446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 67678 - 67600
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||| |||   |||||||||||| |||| | ||||||    
T  67678 tgagattaacacagtcctcgtggatacgaactta-ttttattacttccatagttttagtacacttggtaaaaatctatca 67600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 52725 - 52651
Alignment:
Q  113 attaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaatagctatca 188  Q
    ||||||| ||||||||| ||||||||||||  |||||||||||||||   ||||| ||||||||||| | ||||||    
T  52725 attaacatagtcctcgtggatacgaactta-ttttattacttcgatagttttagtgcacttgctaaaaatctatca 52651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 6556 - 6625
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||||||| |||  |||||||||||||||   |||||||||||| ||||    
T  6556 tgagattaacacagtcctcgtggatacgaattta-ttttattacttcgatatttttagtacacttggtaaa 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 2724 - 2773
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    |||||||||||||||||| || ||||||||||||  |||||||||||||||    
T  2724 tgagattaacacagtccttgtggatacgaactta-ttttattacttcgata 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 13888 - 13937
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  13888 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 13937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 20338 - 20407
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgataaaattagtacacttgctaaa 179  Q
    ||||||||||||||||||||| |||| |||||||  |||||||||||| ||   |||||||||||||||||    
T  20338 tgagattaacacagtcctcgtggatatgaactta-ttttattacttcggtagttttagtacacttgctaaa 20407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 27904 - 27953
Alignment:
Q  109 tgagattaacacagtcctcgtagatacgaacttagatttattacttcgata 159  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  27904 tgagattaacacagtcctcgtggatacgaactta-ttttattacttcgata 27953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 90019 - 90095
Alignment:
Q  81 atccgagataataacaatattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||| ||||| ||||  ||||| |||| ||||||||||||||||||||| ||||| ||||||  ||||||||||||||    
T  90019 atcctagatattaacgttattgctaaattgagattaacacagtcctcgtggatacaaactta-ttttattacttcgat 90095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 5634 - 5687
Alignment:
Q  104 taaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    |||| ||||||||| ||||||||||| ||||||||||||  ||||||||||||||    
T  5634 taaattgagattaaaacagtcctcgtggatacgaactta-ttttattacttcgat 5687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 408 - 453
Alignment:
Q  97 atattgttaaactgagattaacacagtcctcgtagatacgaactta 142  Q
    |||||| |||| ||||||||||||||||||||| ||||| ||||||    
T  408 atattgctaaattgagattaacacagtcctcgtggatacaaactta 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 1395 - 1336
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| ||||||||||| ||||||||| || |||||||||  ||||||||||||||    
T  1395 tattgctaaattgagattaacagagtcctcgtggacacgaactta-ttttattacttcgat 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 198420 - 198464
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaactta 142  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||||||    
T  198420 tattgctaaattgaaattaacacagtcctcgtggatacgaactta 198464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 248796 - 248855
Alignment:
Q  98 tattgttaaactgagattaacacagtcctcgtagatacgaacttagatttattacttcgat 158  Q
    ||||| |||| |||||| |||||||||||||| || |||||||||  ||||||||||||||    
T  248796 tattgctaaattgagatcaacacagtcctcgtggacacgaactta-ttttattacttcgat 248855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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