View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20384_high_242 (Length: 234)

Name: NF20384_high_242
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20384_high_242
NF20384_high_242
[»] chr7 (41 HSPs)
chr7 (1-133)||(9477688-9477821)
chr7 (1-205)||(33067420-33067625)
chr7 (31-113)||(43702384-43702466)
chr7 (1-175)||(42284492-42284680)
chr7 (1-140)||(35092676-35092817)
chr7 (1-113)||(43224380-43224493)
chr7 (1-169)||(46783069-46783240)
chr7 (14-113)||(3551486-3551585)
chr7 (1-113)||(19805100-19805213)
chr7 (1-113)||(16567629-16567742)
chr7 (1-113)||(16597920-16598033)
chr7 (1-133)||(39414607-39414740)
chr7 (1-113)||(46181275-46181388)
chr7 (5-113)||(17172161-17172271)
chr7 (56-113)||(16278491-16278548)
chr7 (1-113)||(10066196-10066311)
chr7 (53-113)||(30738627-30738686)
chr7 (57-113)||(5924064-5924122)
chr7 (17-113)||(31454960-31455058)
chr7 (56-107)||(38398427-38398478)
chr7 (56-107)||(38400969-38401020)
chr7 (57-110)||(43394270-43394323)
chr7 (1-84)||(3363055-3363139)
chr7 (1-84)||(5023128-5023212)
chr7 (54-113)||(25309506-25309565)
chr7 (56-126)||(31330942-31331013)
chr7 (56-113)||(2959997-2960055)
chr7 (56-113)||(36074118-36074176)
chr7 (61-107)||(43218675-43218721)
chr7 (56-113)||(44300775-44300833)
chr7 (59-123)||(21153251-21153316)
chr7 (1-110)||(30391613-30391724)
chr7 (56-113)||(40342310-40342368)
chr7 (56-113)||(40789525-40789583)
chr7 (49-106)||(27039745-27039802)
chr7 (56-113)||(7376606-7376664)
chr7 (56-133)||(9223671-9223749)
chr7 (56-169)||(9355167-9355283)
chr7 (56-113)||(28067265-28067323)
chr7 (60-113)||(48558682-48558736)
chr7 (53-104)||(11244095-11244148)
[»] chr5 (32 HSPs)
chr5 (3-164)||(6224786-6224948)
chr5 (1-113)||(41983304-41983417)
chr5 (16-110)||(31149649-31149743)
chr5 (3-113)||(29455847-29455958)
chr5 (1-110)||(18595420-18595530)
chr5 (16-113)||(22632201-22632296)
chr5 (16-113)||(7978087-7978184)
chr5 (16-110)||(14087722-14087816)
chr5 (1-169)||(15719130-15719302)
chr5 (1-113)||(14088324-14088437)
chr5 (6-113)||(24489017-24489124)
chr5 (1-109)||(1061008-1061118)
chr5 (1-110)||(4572327-4572437)
chr5 (5-113)||(34718725-34718835)
chr5 (5-113)||(41692409-41692519)
chr5 (1-113)||(14645371-14645485)
chr5 (16-113)||(19254441-19254539)
chr5 (5-108)||(6311041-6311148)
chr5 (61-113)||(23141623-23141675)
chr5 (56-110)||(5657713-5657769)
chr5 (16-109)||(36323083-36323175)
chr5 (53-113)||(36470442-36470502)
chr5 (52-113)||(19549406-19549469)
chr5 (56-113)||(6277806-6277864)
chr5 (56-97)||(16620307-16620349)
chr5 (24-111)||(25694637-25694725)
chr5 (16-133)||(3049721-3049840)
chr5 (56-98)||(38309847-38309890)
chr5 (56-110)||(42030924-42030979)
chr5 (16-113)||(35853578-35853676)
chr5 (56-98)||(4901936-4901980)
chr5 (58-113)||(41616640-41616697)
[»] chr4 (55 HSPs)
chr4 (1-110)||(1730983-1731093)
chr4 (3-113)||(34459565-34459676)
chr4 (1-169)||(2073558-2073726)
chr4 (1-110)||(28928555-28928665)
chr4 (1-110)||(22313287-22313397)
chr4 (1-146)||(4757161-4757308)
chr4 (1-113)||(2224889-2225002)
chr4 (66-162)||(7250519-7250615)
chr4 (1-113)||(33983202-33983315)
chr4 (1-113)||(29148948-29149061)
chr4 (1-113)||(42755406-42755519)
chr4 (1-113)||(52595610-52595723)
chr4 (1-113)||(54979078-54979191)
chr4 (1-113)||(3387144-3387261)
chr4 (17-129)||(23147450-23147566)
chr4 (1-106)||(8066030-8066136)
chr4 (16-114)||(27586533-27586630)
chr4 (1-113)||(41003385-41003501)
chr4 (5-113)||(52802200-52802310)
chr4 (5-113)||(53140676-53140786)
chr4 (56-175)||(21297273-21297393)
chr4 (1-107)||(21245911-21246017)
chr4 (1-113)||(42053199-42053313)
chr4 (56-113)||(51806918-51806976)
chr4 (1-113)||(52180709-52180823)
chr4 (57-111)||(39485122-39485178)
chr4 (17-113)||(25938430-25938526)
chr4 (16-113)||(31713581-31713680)
chr4 (16-169)||(54932693-54932842)
chr4 (1-113)||(21075895-21076005)
chr4 (61-107)||(8644224-8644270)
chr4 (50-107)||(9930509-9930567)
chr4 (1-113)||(12185844-12185951)
chr4 (4-84)||(652345-652426)
chr4 (56-113)||(1757968-1758025)
chr4 (1-113)||(2721170-2721278)
chr4 (1-113)||(12187836-12187944)
chr4 (5-98)||(22247940-22248036)
chr4 (56-104)||(24486637-24486686)
chr4 (24-108)||(7117890-7117973)
chr4 (1-84)||(14576881-14576965)
chr4 (50-113)||(14595365-14595429)
chr4 (16-84)||(38000690-38000758)
chr4 (1-113)||(45097627-45097742)
chr4 (16-113)||(22829803-22829901)
chr4 (1-113)||(32655454-32655567)
chr4 (54-115)||(5798307-5798368)
chr4 (61-110)||(8614614-8614663)
chr4 (56-98)||(46080798-46080842)
chr4 (16-113)||(56445108-56445208)
chr4 (72-108)||(44808532-44808568)
chr4 (53-113)||(46030320-46030380)
chr4 (105-175)||(1758030-1758100)
chr4 (56-113)||(33733442-33733499)
chr4 (56-113)||(23349381-23349442)
[»] chr3 (46 HSPs)
chr3 (16-113)||(19873144-19873241)
chr3 (1-113)||(48080113-48080226)
chr3 (1-113)||(50508815-50508928)
chr3 (21-169)||(33558754-33558902)
chr3 (3-110)||(5040999-5041107)
chr3 (1-103)||(39952573-39952676)
chr3 (16-113)||(11671788-11671884)
chr3 (1-110)||(22845073-22845183)
chr3 (24-109)||(2150646-2150731)
chr3 (16-109)||(12905670-12905763)
chr3 (16-113)||(40563994-40564091)
chr3 (3-94)||(23298273-23298365)
chr3 (54-126)||(35203289-35203361)
chr3 (4-98)||(25467556-25467651)
chr3 (16-113)||(19618736-19618833)
chr3 (56-140)||(27346592-27346677)
chr3 (17-113)||(24987367-24987463)
chr3 (1-113)||(6408625-6408739)
chr3 (5-107)||(25630266-25630368)
chr3 (54-112)||(33099698-33099756)
chr3 (1-113)||(39352512-39352624)
chr3 (16-97)||(45079164-45079246)
chr3 (51-114)||(50622251-50622316)
chr3 (56-113)||(26787597-26787653)
chr3 (53-113)||(42881390-42881450)
chr3 (53-113)||(46819211-46819271)
chr3 (16-98)||(41410216-41410299)
chr3 (23-113)||(41924020-41924111)
chr3 (56-113)||(42096741-42096799)
chr3 (1-113)||(50481013-50481120)
chr3 (61-114)||(14418283-14418336)
chr3 (56-107)||(2013053-2013105)
chr3 (56-113)||(8340192-8340251)
chr3 (56-107)||(9162996-9163048)
chr3 (56-103)||(33118952-33119000)
chr3 (16-113)||(35688353-35688452)
chr3 (1-84)||(44792581-44792665)
chr3 (56-113)||(27064243-27064301)
chr3 (56-113)||(30248053-30248111)
chr3 (56-113)||(48583780-48583838)
chr3 (16-113)||(54444354-54444452)
chr3 (64-113)||(7940382-7940431)
chr3 (49-113)||(46584717-46584783)
chr3 (1-84)||(49193543-49193628)
chr3 (105-169)||(25467468-25467532)
chr3 (1-84)||(49360035-49360119)
[»] chr8 (34 HSPs)
chr8 (1-113)||(19643453-19643566)
chr8 (1-113)||(6109678-6109791)
chr8 (3-113)||(2620902-2621013)
chr8 (17-112)||(2472237-2472332)
chr8 (35-113)||(24891392-24891470)
chr8 (35-113)||(25500202-25500280)
chr8 (14-107)||(30801309-30801402)
chr8 (35-113)||(25419323-25419401)
chr8 (1-109)||(7057665-7057773)
chr8 (24-109)||(26561193-26561276)
chr8 (1-113)||(1376241-1376357)
chr8 (1-113)||(24789568-24789682)
chr8 (1-113)||(3616809-3616917)
chr8 (19-108)||(43511253-43511342)
chr8 (56-113)||(20216263-20216321)
chr8 (56-113)||(20235861-20235919)
chr8 (55-113)||(45553123-45553181)
chr8 (58-113)||(15961668-15961724)
chr8 (54-113)||(43239238-43239297)
chr8 (57-110)||(37226768-37226822)
chr8 (56-169)||(38551565-38551679)
chr8 (54-113)||(25178952-25179011)
chr8 (56-113)||(859558-859616)
chr8 (58-113)||(15542190-15542247)
chr8 (60-113)||(39221561-39221615)
chr8 (56-98)||(7580125-7580169)
chr8 (105-169)||(221970-222034)
chr8 (56-113)||(222039-222098)
chr8 (105-169)||(691125-691189)
chr8 (56-113)||(691194-691253)
chr8 (105-169)||(735593-735657)
chr8 (56-113)||(735662-735721)
chr8 (105-169)||(859489-859553)
chr8 (105-169)||(1667243-1667307)
[»] chr1 (53 HSPs)
chr1 (1-113)||(7842621-7842734)
chr1 (1-113)||(32835450-32835563)
chr1 (1-113)||(19996615-19996728)
chr1 (1-169)||(21260687-21260856)
chr1 (1-113)||(29512152-29512265)
chr1 (1-113)||(945535-945648)
chr1 (1-113)||(25059156-25059269)
chr1 (3-113)||(19506438-19506550)
chr1 (61-169)||(38491405-38491513)
chr1 (26-113)||(610765-610852)
chr1 (1-115)||(12560555-12560670)
chr1 (1-113)||(2978474-2978585)
chr1 (1-113)||(424626-424739)
chr1 (1-105)||(13797011-13797116)
chr1 (4-84)||(38491512-38491593)
chr1 (3-113)||(2975188-2975297)
chr1 (53-110)||(973567-973624)
chr1 (54-113)||(10786272-10786331)
chr1 (1-82)||(236453-236535)
chr1 (1-113)||(29054544-29054658)
chr1 (1-113)||(9222298-9222411)
chr1 (5-113)||(4893235-4893345)
chr1 (5-113)||(29185142-29185252)
chr1 (56-169)||(40094515-40094631)
chr1 (1-113)||(44327871-44327982)
chr1 (1-133)||(27783537-27783665)
chr1 (1-113)||(28221023-28221135)
chr1 (56-115)||(31873297-31873357)
chr1 (56-110)||(3821270-3821325)
chr1 (4-113)||(43634448-43634561)
chr1 (1-113)||(35978448-35978562)
chr1 (1-113)||(13312788-13312903)
chr1 (24-106)||(2465517-2465599)
chr1 (56-109)||(16177066-16177120)
chr1 (56-113)||(20415023-20415081)
chr1 (56-113)||(30489721-30489779)
chr1 (16-113)||(31646254-31646351)
chr1 (16-93)||(40044992-40045068)
chr1 (1-109)||(33794337-33794450)
chr1 (56-111)||(35659607-35659661)
chr1 (5-113)||(33362838-33362948)
chr1 (48-109)||(31107635-31107695)
chr1 (1-113)||(25815264-25815379)
chr1 (80-144)||(32888105-32888169)
chr1 (16-84)||(42069081-42069149)
chr1 (57-113)||(48985185-48985243)
chr1 (53-83)||(2433347-2433377)
chr1 (60-107)||(8981564-8981615)
chr1 (53-109)||(9473007-9473065)
chr1 (24-106)||(30622963-30623044)
chr1 (56-113)||(46772479-46772536)
chr1 (60-97)||(45816510-45816547)
chr1 (105-169)||(29426371-29426435)
[»] chr2 (29 HSPs)
chr2 (16-110)||(667926-668020)
chr2 (16-96)||(15150182-15150262)
chr2 (15-113)||(29155368-29155466)
chr2 (1-113)||(13142511-13142624)
chr2 (20-133)||(44070375-44070490)
chr2 (54-113)||(12757818-12757877)
chr2 (58-113)||(20937097-20937152)
chr2 (24-113)||(4592157-4592246)
chr2 (1-113)||(32422680-32422793)
chr2 (1-113)||(38620444-38620557)
chr2 (53-110)||(16711335-16711392)
chr2 (1-113)||(30241481-30241594)
chr2 (24-105)||(38958645-38958725)
chr2 (1-98)||(10391583-10391682)
chr2 (5-113)||(4289692-4289802)
chr2 (54-104)||(17154140-17154190)
chr2 (1-113)||(33867484-33867598)
chr2 (1-113)||(31440571-31440688)
chr2 (16-110)||(18974758-18974854)
chr2 (1-113)||(4481108-4481223)
chr2 (1-113)||(25424806-25424919)
chr2 (58-113)||(35005457-35005514)
chr2 (21-113)||(3329243-3329336)
chr2 (56-114)||(15234361-15234421)
chr2 (105-169)||(668028-668092)
chr2 (61-108)||(40475284-40475332)
chr2 (61-108)||(40507631-40507679)
chr2 (105-169)||(41935582-41935646)
chr2 (56-113)||(39767125-39767183)
[»] chr6 (19 HSPs)
chr6 (1-113)||(12429486-12429599)
chr6 (1-133)||(31783918-31784053)
chr6 (4-112)||(6938105-6938214)
chr6 (1-140)||(29641397-29641540)
chr6 (1-132)||(31511576-31511710)
chr6 (1-113)||(33328651-33328764)
chr6 (1-113)||(33331663-33331776)
chr6 (5-113)||(24447062-24447172)
chr6 (1-83)||(7807848-7807931)
chr6 (5-113)||(1221651-1221761)
chr6 (16-113)||(20691538-20691636)
chr6 (56-169)||(33960143-33960253)
chr6 (1-84)||(13534121-13534205)
chr6 (49-120)||(31555937-31556007)
chr6 (56-113)||(6337296-6337353)
chr6 (1-44)||(1329494-1329538)
chr6 (53-113)||(28769941-28770001)
chr6 (1-113)||(31070859-31070970)
chr6 (48-115)||(6799420-6799488)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-113)||(5810-5923)
[»] scaffold0164 (2 HSPs)
scaffold0164 (1-169)||(7051-7217)
scaffold0164 (1-169)||(14932-15098)
[»] scaffold0242 (2 HSPs)
scaffold0242 (56-133)||(13079-13157)
scaffold0242 (56-133)||(21914-21992)
[»] scaffold0230 (1 HSPs)
scaffold0230 (5-113)||(26691-26801)
[»] scaffold0602 (1 HSPs)
scaffold0602 (61-107)||(5070-5116)
[»] scaffold0056 (1 HSPs)
scaffold0056 (56-113)||(72589-72645)
[»] scaffold0160 (1 HSPs)
scaffold0160 (16-113)||(26079-26178)
[»] scaffold0005 (2 HSPs)
scaffold0005 (50-113)||(221949-222013)
scaffold0005 (1-84)||(240410-240494)
[»] scaffold0472 (1 HSPs)
scaffold0472 (71-109)||(7936-7974)
[»] scaffold0249 (1 HSPs)
scaffold0249 (56-113)||(20089-20147)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 9e-51; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 9477821 - 9477688
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9477821 ttgactaaatactacgattcatattattttatgagttaattttaaaagttttagaccatagttttatttcaattgtgatgtttttattgtcttttcatag 9477722  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccata 133  Q
    |||||||||||||||| |||||||||||||||||    
T  9477721 ttaaagtgcgggtatgggcacttaggtacccata 9477688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 33067420 - 33067625
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||      
T  33067420 ttgactaaatactacgattcatattattttatgagttaattttaaaagatgtagaccatagttttatttcaattgtgatatttttattgtcttttcattg 33067519  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacgaaagtacatgtatagatacgtgtaattttta 199  Q
     ||||||||||||||| |||||||||||||||||   ||||  |||| || |||||||||||||| ||||  |||   | || |||||| ||||||||||    
T  33067520 ctaaagtgcgggtatgggcacttaggtacccatagagtatggggaaggacactaaagttgttgcccacgagggtatgggcatggatacgggtaattttta 33067619  T
Q  200 caaatg 205  Q
    ||||||    
T  33067620 caaatg 33067625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 43702384 - 43702466
Alignment:
Q  31 tgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43702384 tgagttaattttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 43702466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 42284680 - 42284492
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||| |  |||||||||||||||||||||||||||||||||||||||||||     
T  42284680 ttgactaaatactacgattcatattattttatgagttaattttaaaatattttgttcatagttttatttcaattgtgatgtttttattgtcttttcatag 42284581  T
Q  100 ttaaa-------------gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacgaaagtac 175  Q
    |||||             ||||| ||||||||| |||| |||||||||||||||  ||||| | |||||||||||||| |||| |||||    
T  42284580 ttaaagtgtggataatgggtgcgagtatgtgcatttagatacccatatgatatggggaagagcactaaagttgttgcccacgagagtac 42284492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 35092676 - 35092817
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttt-ttattgtcttttcata 98  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||| || |||| ||||||||    
T  35092676 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatttttgtttttgttttttcata 35092775  T
Q  99 attaaagtgcgggtatgtgcacttaggtacccatatgatatg 140  Q
     ||||||||||||||||  |||||||||||||||||||||||    
T  35092776 gttaaagtgcgggtatggacacttaggtacccatatgatatg 35092817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 43224493 - 43224380
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| ||||||||||| |||||| ||||| |||||| || |||| ||||||||||||||||||||||||||||| ||||||||     
T  43224493 ttgactaaatactacgattcttattattttattagttaattttaaaagattttgatcataattttatttcaattgtgatgtttttattgttttttcatag 43224394  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  43224393 ttaaagtgcgggta 43224380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 46783240 - 46783069
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttatt--gtcttttcat 97  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || ||||||||||||| | || |||||||||| ||  || |||||||    
T  46783240 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcatagttttattttatttttgatgttttttttttgttttttcat 46783141  T
Q  98 aattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    | |||||||||||||||| ||||||||||||||||| | |||| |||||    |||||||||||||| ||||    
T  46783140 agttaaagtgcgggtatgggcacttaggtacccatagggtatggagaaggggactaaagttgttgcccacga 46783069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 3551486 - 3551585
Alignment:
Q  14 caattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||| |||||| ||||| | |||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||    
T  3551486 caattcatattattttataagttaattttaaaaaatttggaccatagttctatttcaattgtgatgttttcattgtcttttcatagttaaagtgtgggta 3551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19805213 - 19805100
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||||| |||| ||||||||     
T  19805213 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatattttttttgttttttcatag 19805114  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  19805113 ttaaagtgcgggta 19805100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 16567742 - 16567629
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  16567742 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 16567643  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  16567642 ttaaagtgcgggta 16567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16597920 - 16598033
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  16597920 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 16598019  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  16598020 ttaaagtgcgggta 16598033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 39414740 - 39414607
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  ||   ||||||||||||| ||| ||||||||| |||| ||||||||     
T  39414740 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggattgtagttttatttcatttgcgatgttttttttgttttttcatag 39414641  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccata 133  Q
    |||||||||||||||| | |||||  ||||||||    
T  39414640 ttaaagtgcgggtatgggtacttaaatacccata 39414607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46181388 - 46181275
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  46181388 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 46181289  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  46181288 ttaaagtgcgggta 46181275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 17172161 - 17172271
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   |    
T  17172161 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 17172260  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  17172261 aagtgcgggta 17172271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 16278548 - 16278491
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  16278548 catagttttatatcaattgtgatgtttttattgtctttttataattaaagtgtgggta 16278491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10066196 - 10066311
Alignment:
Q  1 ttgactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg--tttttattgtcttttcat 97  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||||| | |||  ||   ||||||||||||| ||||||||  ||||| |||| |||||||    
T  10066196 ttgactaaataacacgattcatattattttatgagttaattttaaaaaattgggattgtagttttatttcatttgtgatgttttttttttgttttttcat 10066295  T
Q  98 aattaaagtgcgggta 113  Q
    | ||||||||||||||    
T  10066296 agttaaagtgcgggta 10066311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 30738627 - 30738686
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  30738627 gaccatagttt-atttcaattgtgatgtttttattgtcttttcatagttaaagtgcaggta 30738686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 5924064 - 5924122
Alignment:
Q  57 atagttttatttcaattgtgatg--tttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  5924064 atagttttatttcaattgtgatgcttttttattgtcttttcatagttaaagtgcgggta 5924122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 31455058 - 31454960
Alignment:
Q  17 ttcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt--ttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||| ||| | | ||| ||| | ||||||||||||| |||||||||  |||| |||| |||||||| ||||||||||||||    
T  31455058 ttcatattattttatgagttaattttgaaaaattgagatcgtagttttatttcatttgtgatgttttttttttgttttttcatagttaaagtgcgggta 31454960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 38398427 - 38398478
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtg 107  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  38398427 catagttttatttcaattgtaatgtttttattgtcttttcatagttaaagtg 38398478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 38400969 - 38401020
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtg 107  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  38400969 catagttttatttcaattgtaatgtttttattgtcttttcatagttaaagtg 38401020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 43394270 - 43394323
Alignment:
Q  57 atagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  43394270 atagttttattttaattgtgatatttttattgtcttttcataattaaaatgcgg 43394323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 3363139 - 3363055
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    
T  3363139 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt 3363055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 5023128 - 5023212
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    
T  5023128 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt 5023212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 25309506 - 25309565
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||| |||||||| ||||||||||||| || || ||||||||||||||    
T  25309506 accatagttttatttccattgtgatatttttattgtcttctcgtagttaaagtgcgggta 25309565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 31330942 - 31331013
Alignment:
Q  56 catagttttatttcaattgtgatgttttta-ttgtcttttcataattaaagtgcgggtatgtgcacttaggt 126  Q
    ||||||||||||||| ||||||||||||   |||||||||| || |||||||| ||||||||||||||||||    
T  31330942 catagttttatttcagttgtgatgttttccgttgtcttttcgtagttaaagtgtgggtatgtgcacttaggt 31331013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 2960055 - 2959997
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  2960055 cataattttatttcaattgtgatgttttttattgtcatttcatagttaaagtgcgggta 2959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 36074118 - 36074176
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  36074118 cataattttatttcaattgtgatgtttttaattgtctatttataattaaagtgcgggta 36074176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 43218721 - 43218675
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtg 107  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  43218721 ttttatttcaattgtgatatttttattgtcttttcatagttaaagtg 43218675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 44300833 - 44300775
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  44300833 catagttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggta 44300775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 21153316 - 21153251
Alignment:
Q  59 agttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggtatgtgcactta 123  Q
    |||||||||||||||||| ||||||| |||||||||| ||  |||||||||||||||| |||||||    
T  21153316 agttttatttcaattgtggtgttttttattgtctttttatggttaaagtgcgggtatgggcactta 21153251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30391724 - 30391613
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt-attgtcttttcata 98  Q
    |||||||||||| || ||||||| ||||||||||||| | || ||    ||| || ||| ||||||||||||||||| ||||||| |||||||||||||     
T  30391724 ttgactaaatactacgattcatactattttatgagttgatttgaaattttttggatcatggttttatttcaattgtgctgttttttattgtcttttcatg 30391625  T
Q  99 attaaagtgcgg 110  Q
     |||||||||||    
T  30391624 gttaaagtgcgg 30391613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 40342310 - 40342368
Alignment:
Q  56 catagttttatttcaattgtga-tgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||||    
T  40342310 catagttttatttcaattgtgggtttttttattgtcttttcatagttaaaatgcgggta 40342368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 40789525 - 40789583
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||| |||||||||| ||||||||   ||||||||||||    
T  40789525 catagttttatttcaattgtgatgttttttattgttttttcatagagaaagtgcgggta 40789583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 27039745 - 27039802
Alignment:
Q  49 tttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagt 106  Q
    |||| |||||| | ||||||||||||||| ||||||||||||||||| ||||| ||||    
T  27039745 tttaaaccataatcttatttcaattgtgacgtttttattgtcttttcttaattgaagt 27039802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 7376664 - 7376606
Alignment:
Q  56 catagttttatttcaattgtgat-gtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||||||  ||||||||    
T  7376664 catagttttatttcaattgtgatattttttattatctttttataattaacttgcgggta 7376606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 9223749 - 9223671
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccata 133  Q
    |||||||||||||||| |||| || |||||||| |||||||||   |||||||||||||||  |||||| || ||||||    
T  9223749 catagttttatttcaagtgtggtgatttttattatcttttcattgctaaagtgcgggtatggacacttaagtgcccata 9223671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 9355167 - 9355283
Alignment:
Q  56 catagttttatttcaattgtgatg---tttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactct 152  Q
    |||||||||||||||| ||||  |   |||||||| ||||| |||   |||| |||||||||| ||||||| || |||||| | ||||| |||| || ||    
T  9355167 catagttttatttcaagtgtgtggtgatttttattatctttccatggctaaaatgcgggtatgagcacttaagtgcccatagggtatgaggaaggacact 9355266  T
Q  153 aaagttgttgcctacga 169  Q
    |||||||||||| ||||    
T  9355267 aaagttgttgcccacga 9355283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 28067265 - 28067323
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||||||| |||||| ||||||||||||||  ||||||||| ||||    
T  28067265 cataattttatttcaattgtggtgttttttattgtcttttcatggttaaagtgcaggta 28067323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 48558682 - 48558736
Alignment:
Q  60 gttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||| |||| |||||| ||||||||||||||  ||||||||||||||    
T  48558682 gttttatttcaactgtgctgttttttattgtcttttcatggttaaagtgcgggta 48558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 11244148 - 11244095
Alignment:
Q  53 gaccatagttttattt-caattgtgatgt-ttttattgtcttttcataattaaa 104  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||| |||||    
T  11244148 gaccatagttttattttcaattgtgatatattttattgtcttttcatagttaaa 11244095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 6224786 - 6224948
Alignment:
Q  3 gactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatt 101  Q
    |||||||||| ||||||| |||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6224786 gactaaatactacaattcgtattattttatgagttaattttaaaatattttgaccatagttttatttcaattgtgatgtttttattgtcttttcatagtt 6224885  T
Q  102 aaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcc 164  Q
    |||||||||||||| |||||| | |||||||| | ||||  ||||  | ||||||||||||||    
T  6224886 aaagtgcgggtatgggcacttggatacccatagggtatggggaagggcactaaagttgttgcc 6224948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41983417 - 41983304
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||||||||||||||||  |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41983417 ttgactaaatactacgattcatattattttatggtttaattttaaaagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcatag 41983318  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  41983317 ttaaagtgcgggta 41983304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 31149649 - 31149743
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    |||| |||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31149649 attcgtattattttatgagttaattttaagagattttgaccatagttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgg 31149743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 29455958 - 29455847
Alignment:
Q  3 gactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatt 101  Q
    |||||||||| ||||||||||||||||||| |||||| ||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  29455958 gactaaatactacaattcatattattttataagttaattttaaaatattttgaccatagttttatttcaattgtgatgtttttattatcttttcatagtt 29455859  T
Q  102 aaagtgcgggta 113  Q
    |||||| |||||    
T  29455858 aaagtgtgggta 29455847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18595530 - 18595420
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||| |||||||||| |||| |||     
T  18595530 ttgactaaatactacgattcatattattttatgagttaattttaaaagatgtagaccataattttatttcaattgtgatatttttattgtttttttatag 18595431  T
Q  100 ttaaagtgcgg 110  Q
    |||||||||||    
T  18595430 ttaaagtgcgg 18595420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 22632201 - 22632296
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||| ||||| ||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22632201 attcgtattattttatgggttaattttaaaagatttagaccaa--ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 22632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 7978184 - 7978087
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||| | |||||| ||||| |||||| || |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  7978184 attcatattatttttttagttaattttaaaagattttgatcataattttatttcaattgtgatgtttttattgttttttcatagttaaagtgcgggta 7978087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 14087816 - 14087722
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    |||| ||||||||||| |||||| ||||| |||||| || |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  14087816 attcgtattattttattagttaattttaaaagattttgatcataattttatttcaattgtgatgtttttattgttttttcatagttaaagtgcgg 14087722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 15719130 - 15719302
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagat---ttagaccatagttttatttcaattgtgatgtttttattgtcttttca 96  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | ||   |  || | ||||||||||||| ||||||||||||| |||  ||||||    
T  15719130 ttgactaaataccacgattcatattattttatgagttaattttaaaaaataattgggatcgtagttttatttcatttgtgatgttttttttggtttttca 15719229  T
Q  97 taattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    || |||||||||||||||| ||||||| ||||||||| | ||||| ||||    |||||||||||||| ||||    
T  15719230 tagttaaagtgcgggtatgggcacttaagtacccatagggtatgaggaaggggactaaagttgttgcccacga 15719302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 14088437 - 14088324
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||||||||     
T  14088437 ttgactaaataccacaattcatattattttatgaattaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgttttttcatag 14088338  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  14088337 ttaaagtgcgggta 14088324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 24489017 - 24489124
Alignment:
Q  6 taaatacacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaag 105  Q
    ||||||| ||||||||| ||||||||||||| | || || |  |||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  24489017 taaatactcaattcatactattttatgagttgatttgaaaatttttgaaccatagttttatttcaattgtgatatttttattgtcttttcatagttaaag 24489116  T
Q  106 tgcgggta 113  Q
    || |||||    
T  24489117 tgtgggta 24489124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1061118 - 1061008
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||| |||| |||| ||||||||    
T  1061118 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgttttttcata 1061019  T
Q  99 attaaagtgcg 109  Q
     ||||||||||    
T  1061018 gttaaagtgcg 1061008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4572437 - 4572327
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| |||| ||||||||||||| ||||| |  ||  || | ||||||||||||| ||||||||||||| |||||||||||||     
T  4572437 ttgactaaatactacgattcgtatttttttatgagttaattttaaaaatttgggatcgtagttttatttcatttgtgatgttttttttgtcttttcatag 4572338  T
Q  100 ttaaagtgcgg 110  Q
    |||||||||||    
T  4572337 ttaaagtgcgg 4572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 34718725 - 34718835
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   |    
T  34718725 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 34718824  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  34718825 aagtgcgggta 34718835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 41692409 - 41692519
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   |    
T  41692409 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 41692508  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  41692509 aagtgcgggta 41692519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 14645485 - 14645371
Alignment:
Q  1 ttgactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    ||||||||||| |||  ||||| |||||||||||||||| ||||| | ||| ||| | ||||||||||||| ||||||||| |||| |||| ||| ||||    
T  14645485 ttgactaaatatcacggttcatgttattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgtttttttttgtttttccata 14645386  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  14645385 gttaaagtgcgggta 14645371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 19254441 - 19254539
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||| |||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||    
T  19254441 attcatactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggta 19254539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 6311148 - 6311041
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt---ttttattgtcttttcataat 100  Q
    |||||||| ||||||| || ||||||||||||| | || || | | ||||| |||| ||||||||||||||||||||   |||||||||||||||||| |    
T  6311148 ctaaatactacaattcgtactattttatgagttgatttaaaaaaaattagatcatatttttatttcaattgtgatgttttttttattgtcttttcatagt 6311049  T
Q  101 taaagtgc 108  Q
    ||||||||    
T  6311048 taaagtgc 6311041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 23141623 - 23141675
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  23141623 ttttatttcaattgtgatatttttattgtcttttcatagttaaaatgcgggta 23141675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 5657713 - 5657769
Alignment:
Q  56 catagttttatttcaattgtgatgtttt--tattgtcttttcataattaaagtgcgg 110  Q
    ||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||    
T  5657713 catagttttatttcaatagtgatgtttttttattgtctttttataattaaagtgcgg 5657769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 36323175 - 36323083
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcg 109  Q
    ||||||||||||| ||||||| | || || |  ||| ||||||||||||||| |||| |||||||||||||||||  |||||| ||||||||||    
T  36323175 attcatattatttgatgagttgatttgaaaaattttggaccatagttttattccaatcgtgatgtttttattgtc-cttcatagttaaagtgcg 36323083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 36470442 - 36470502
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||||||||||||||   ||||||||  |||||||| ||||    
T  36470442 gaccatagttttatttcaattgtgatgtttttattcctttttcatagctaaagtgctggta 36470502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 19549469 - 19549406
Alignment:
Q  52 agaccatagttttattt-caattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||| ||||||| || | |||||||||||||||||| ||||||||||||||    
T  19549469 agaccatagttttattttcaattgtaatatattttattgtcttttcatagttaaagtgcgggta 19549406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 6277806 - 6277864
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||| ||||||| |||||||||||||||   ||||||||||||    
T  6277806 catagttttatttcaattgtaatgttttatattgtcttttcatagagaaagtgcgggta 6277864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 16620307 - 16620349
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcat 97  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  16620307 catagttttatttcaattgtgatgctttttattgtcttttcat 16620349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 25694637 - 25694725
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcggg 111  Q
    |||||||| |||| | || ||||  |||||| || | ||||||||||||||||||| |||||||||||||||||||   ||||||||||    
T  25694637 tattttattagttgatttaaataattttagatcacaattttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcggg 25694725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 3049721 - 3049840
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagac-catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||| |||||| | ||||| | | || ||  ||||||||||||||||||||| || |||||||| |||||||||   |||||||| ||||    
T  3049721 attcatattattttgtgagttgattttaaaaaaatttgaatcatagttttatttcaattgtggtgttttttattatcttttcatggctaaagtgcaggta 3049820  T
Q  114 tgtgcacttaggtacccata 133  Q
    || | ||||| || ||||||    
T  3049821 tgggtacttaagtgcccata 3049840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 38309890 - 38309847
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  38309890 catagttttatttcaattgtgatgttttttgttgtcttttcata 38309847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 42030979 - 42030924
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgg 110  Q
    |||||||||||||||||||| || ||||| |||||||||| ||||||| |||||||    
T  42030979 catagttttatttcaattgtaatattttttattgtctttttataattacagtgcgg 42030924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 35853676 - 35853578
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||  | |||| | ||||| | |||| || |||||||||||||||| |||| || |||||||| |||||||||   |||||||||||||    
T  35853676 attcatattatttcgtaagttgattttaaaaaatttggatcatagttttatttcaagtgtggtgatttttattatcttttcatggctaaagtgcgggta 35853578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 4901936 - 4901980
Alignment:
Q  56 catagttttatttcaattgtgatg--tttttattgtcttttcata 98  Q
    |||| |||||||||||||||||||  |||||||||||||||||||    
T  4901936 catatttttatttcaattgtgatgcttttttattgtcttttcata 4901980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 41616697 - 41616640
Alignment:
Q  58 tagttttatttcaattgtgatgt---ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||| |||||||||   ||||||||| |||||||| ||||||||||||||    
T  41616697 tagttttatttcatttgtgatgttttttttattgt-ttttcatagttaaagtgcgggta 41616640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1730983 - 1731093
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1730983 ttgactaaatactacaattcatattattttatgaattaattttaaaagatttagactatagttttatttcaattgtgatgtttttattgtcttttcataa 1731082  T
Q  100 ttaaagtgcgg 110  Q
    |||||||||||    
T  1731083 ttaaagtgcgg 1731093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 34459565 - 34459676
Alignment:
Q  3 gactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatt 101  Q
    |||||||||| || ||||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34459565 gactaaatactacgattcatattattttatgagttaattttaaaatattttgaccatagttttatttcaattgtgatgtttttattgtcttttcatagtt 34459664  T
Q  102 aaagtgcgggta 113  Q
    ||||||||||||    
T  34459665 aaagtgcgggta 34459676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2073558 - 2073726
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||     
T  2073558 ttgactaaatactacgattcgtattattttatgagttaattttaaaagatttagaccatagttttatctcaattgtgatgtttttattgtgttttcatag 2073657  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    | ||||||| |||| | ||||||| ||||||||| | ||||  ||||  | |||||||||||||| ||||    
T  2073658 tcaaagtgc-ggtacgggcacttacgtacccatagggtatggggaagggcactaaagttgttgcccacga 2073726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28928555 - 28928665
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||  |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  28928555 ttgactaaatactacgatttgtattattttatgagataattttaaaagatttagaccatagttttatttcaattgtaatgtttttattgtcttttcatag 28928654  T
Q  100 ttaaagtgcgg 110  Q
    |||||||||||    
T  28928655 ttaaagtgcgg 28928665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22313287 - 22313397
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||||||||||||||| |||||| ||||| |||||| || |||| ||||||||||||||||||||||||||||| ||||||||     
T  22313287 ttgactaaatactacgattcatattattttattagttaattttaaaagattttgatcataattttatttcaattgtgatgtttttattgttttttcatag 22313386  T
Q  100 ttaaagtgcgg 110  Q
    |||||||||||    
T  22313387 ttaaagtgcgg 22313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4757308 - 4757161
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||| |||| |||| |||||| |    
T  4757308 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgttttttcaaa 4757209  T
Q  99 attaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaag 146  Q
     ||||||||||||||||  |||||||||||||||| | |||| |||||    
T  4757208 gttaaagtgcgggtatgaacacttaggtacccataaggtatggagaag 4757161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2224889 - 2225002
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| |||||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||||| |||| ||||||||     
T  2224889 ttgactaaataccacaattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatattttttttgttttttcatag 2224988  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  2224989 ttaaagtgcgggta 2225002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 7250519 - 7250615
Alignment:
Q  66 tttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttg 162  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||  |||||  ||||  | ||||||||||||    
T  7250519 tttcaattgtgatgtttttattgtcttttcatagttaaagtgcaggtatgggcacttaggtacccatagaatatggggaagggcactaaagttgttg 7250615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33983315 - 33983202
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| ||||||||||| |||| | ||||| |||||| || |||| ||||||||||||||||||||||| ||| | ||||||||     
T  33983315 ttgactaaatactacgattcgtattattttattagttcattttaaaagattttgatcataattttatttcaattgtgatgttttcattattttttcatag 33983216  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  33983215 ttaaagtgcgggta 33983202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29148948 - 29149061
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  29148948 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 29149047  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  29149048 ttaaagtgcgggta 29149061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42755519 - 42755406
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| |  ||  || | ||||||||||| | ||||||||||||| |||| ||||||||     
T  42755519 ttgactaaataccacgattcatattattttatgagttaattttaaaaacttgggatcgtagttttatttgatttgtgatgttttttttgttttttcatag 42755420  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  42755419 ttaaagtgcgggta 42755406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 52595723 - 52595610
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | ||| |||   ||||||||||| | ||||||||||||| |||| ||||||||     
T  52595723 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgagattgtagttttattttacttgtgatgttttttttgttttttcatag 52595624  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  52595623 ttaaagtgcgggta 52595610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 54979078 - 54979191
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  54979078 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 54979177  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  54979178 ttaaagtgcgggta 54979191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3387144 - 3387261
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaataga----tttagaccatagttttatttcaattgtgatgtttttattgtcttttc 95  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |    || ||| | ||||||||||||| ||||||||||||| ||||||||||    
T  3387144 ttgactaaataccacgattcatattattttatgagttaatttaaaaaaaaaatttgagatcgtagttttatttcatttgtgatgttttttttgtcttttc 3387243  T
Q  96 ataattaaagtgcgggta 113  Q
    ||| ||||||||||||||    
T  3387244 atagttaaagtgcgggta 3387261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 23147566 - 23147450
Alignment:
Q  17 ttcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt----ttttattgtcttttcataattaaagtgcgggt 112  Q
    |||||||||||||||||||||| ||||| | ||| ||| | ||||||||||||| |||||||||    |||| |||| |||||||| |||||||||||||    
T  23147566 ttcatattattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgttttttttttttgttttttcatagttaaagtgcgggt 23147467  T
Q  113 atgtgcacttaggtacc 129  Q
    |||  |||||| |||||    
T  23147466 atggacacttaagtacc 23147450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8066136 - 8066030
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||   | | ||||||||||||| ||||||||||||| |||| ||||||||     
T  8066136 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattggaatcgtagttttatttcatttgtgatgttttttttgttttttcatag 8066037  T
Q  100 ttaaagt 106  Q
    |||||||    
T  8066036 ttaaagt 8066030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 27586533 - 27586630
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtat 114  Q
    ||||||| ||| ||||||||||| ||||  | | || |||||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||||    
T  27586533 attcatactatcttatgagttaattttacaaaaatttgaccatagttttatta-aattgtaatgtttttattgtcttttcataattaaagtgtgggtat 27586630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41003501 - 41003385
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt---ttttattgtcttttca 96  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||   |||| |||| ||||||    
T  41003501 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattcggatcgtagttttatttcatttgtgatgtttttttttttgttttttca 41003402  T
Q  97 taattaaagtgcgggta 113  Q
    || ||||||||||||||    
T  41003401 tagttaaagtgcgggta 41003385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 52802200 - 52802310
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   |    
T  52802200 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 52802299  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  52802300 aagtgcgggta 52802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 53140786 - 53140676
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || ||||||||||||||||||||||||| ||||||||||||||||||   |    
T  53140786 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 53140687  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  53140686 aagtgcgggta 53140676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 21297273 - 21297393
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaa 154  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||  |||||| ||| ||||| | |||   ||||  | ||||    
T  21297273 cataattttatttcaattatgatgttttttattgtcttttcatagttaaagtgcgggtatggacacttaagtatccatagggtatagggaagggcactaa 21297372  T
Q  155 agttgttgcctacgaaagtac 175  Q
    |||||||||| |||| |||||    
T  21297373 agttgttgcccacgagagtac 21297393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 21246017 - 21245911
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| |||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| ||||| |||||||     
T  21246017 ttgactaaatactacgattcgtattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt-ttgtcctttcatag 21245919  T
Q  100 ttaaagtg 107  Q
    ||||||||    
T  21245918 ttaaagtg 21245911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42053199 - 42053313
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcata 98  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||| ||||| |||| ||| ||||    
T  42053199 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgtttttccata 42053298  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  42053299 gttaaagtgcgggta 42053313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 51806918 - 51806976
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  51806918 catagttttatttcaatggtgatgttttttattgtctttttataattaaagtgcgggta 51806976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 52180709 - 52180823
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcata 98  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||| ||||| |||| ||| ||||    
T  52180709 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgtttttccata 52180808  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  52180809 gttaaagtgcgggta 52180823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 39485122 - 39485178
Alignment:
Q  57 atagttttatttcaattgtgatg--tttttattgtcttttcataattaaagtgcggg 111  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  39485122 atagttttatttcaattgtgatgtttttttattgtctttttataattaaagtgcggg 39485178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 25938526 - 25938430
Alignment:
Q  17 ttcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||| ||||| | |||  || | || |||||||||| ||||||||||||| |||| |||| ||| ||||||||| ||||    
T  25938526 ttcatattattttatgagttaattttaaaaaattgggatcgtaattttatttcatttgtgatgttttttttgtttttttatagttaaagtgctggta 25938430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 31713581 - 31713680
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtga--tgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | || ||    ||| || |||||||||||||||||||||   | ||||||||||||||||||||||||| ||||||||    
T  31713581 attcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttttattgtcttttcataattaaaatgcgggta 31713680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 169
Target Start/End: Original strand, 54932693 - 54932842
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatg 115  Q
    |||||| |||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    | |||||||| |||||||||||||||     
T  54932693 attcatgttattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt----ttttttcatagttaaagtgcgggtatt 54932788  T
Q  116 tgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
      ||| |||||| ||||| | ||||  |||| |  |||||||||||||| ||||    
T  54932789 gacacctaggtatccataaggtatggggaaggagactaaagttgttgcccacga 54932842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 21076005 - 21075895
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||  ||||||| ||||| ||   ||||||||     
T  21076005 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcttttgtgatatttttttt---ttttcatag 21075909  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  21075908 ttaaagtgcgggta 21075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 8644224 - 8644270
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtg 107  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  8644224 ttttagttcaattgtgatatttttattgtcttttcataattaaagtg 8644270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 9930567 - 9930509
Alignment:
Q  50 ttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtg 107  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  9930567 ttagatcatagttttatttcaatggtgatgttttttattgtctttttataattaaagtg 9930509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12185951 - 12185844
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| |||||      ||||||||     
T  12185951 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgattttttt------ttttcatag 12185858  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  12185857 ttaaagtgcgggta 12185844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 652426 - 652345
Alignment:
Q  4 actaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||| ||| ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    
T  652426 actaaatatcacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt 652345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 1757968 - 1758025
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||| |||||||||||   ||||||||| |||||||||||||    
T  1757968 catagttttatttcaattgtaatgtttttattcctttttcataactaaagtgcgggta 1758025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2721170 - 2721278
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||||     | ||||||||     
T  2721170 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatatttt-----ttttttcatag 2721264  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  2721265 ttaaagtgcgggta 2721278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12187944 - 12187836
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||||     | ||||||||     
T  12187944 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatatttt-----ttttttcatag 12187850  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  12187849 ttaaagtgcgggta 12187836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 22248036 - 22247940
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt--ttttattgtcttttcata 98  Q
    |||||||| ||||||  ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||||  ||||||||||||||||||    
T  22248036 ctaaatactacaatttgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgtttttttattgtcttttcata 22247940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 24486686 - 24486637
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaaa 104  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  24486686 catagttttatttcaattgtgatgttttttattgtctttttataattaaa 24486637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 7117890 - 7117973
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgc 108  Q
    ||||||||||||| | || || | |||| ||||||| ||||| |||||||||| ||||||||||||| ||||||| |||||||||    
T  7117890 tattttatgagttgatttgaaaaaatttggaccataattttagttcaattgtgttgtttttattgtc-tttcatagttaaagtgc 7117973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14576965 - 14576881
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| |||||    
T  14576965 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatattttt 14576881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 14595429 - 14595365
Alignment:
Q  50 ttagaccatagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||| ||| ||||||||||||||||||    
T  14595429 ttagatcatagttttatttcaatggtgatattttttattgtcgttttataattaaagtgcgggta 14595365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 38000758 - 38000690
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    
T  38000758 attcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt 38000690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 45097742 - 45097627
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt--ttttattgtcttttcat 97  Q
    ||||| |||||| ||||||| || |||||||| |||| | || ||||  ||| || ||||||||||||| |||||||||||  |||||||||||||||||    
T  45097742 ttgaccaaatactacaattcgtactattttattagttgatttaaataattttggatcatagttttattttaattgtgatgtttttttattgtcttttcat 45097643  T
Q  98 aattaaagtgcgggta 113  Q
    |   ||||||||||||    
T  45097642 agagaaagtgcgggta 45097627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 22829901 - 22829803
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgt-gatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | || ||    ||| || |||||||||||||||||||| | | |||||||||| |||||||| ||||| ||||||||    
T  22829901 attcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggtttttttattgttttttcatagttaaaatgcgggta 22829803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32655454 - 32655567
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcata 98  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | ||   || | ||||||||||||| |||||||| ||||| |||| ||| ||||    
T  32655454 ttgactaaataccacggttcatattattttatgagttaattttaaaaaatgg-gatcgtagttttatttcatttgtgatgtttttttttgtttttccata 32655552  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  32655553 gttaaagtgcgggta 32655567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 5798368 - 5798307
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatg 115  Q
    |||||| ||||||||||||||| || ||||||||||||||||| | ||||| || |||||||    
T  5798368 accataattttatttcaattgtaatatttttattgtcttttcacatttaaaatgtgggtatg 5798307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 8614663 - 8614614
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    ||||| |||||||| ||| ||||||||||||||||||| |||||||||||    
T  8614663 ttttagttcaattgagatatttttattgtcttttcatagttaaagtgcgg 8614614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 46080842 - 46080798
Alignment:
Q  56 catagttttatttcaattgtgatgt--ttttattgtcttttcata 98  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  46080842 catagttttatttcaattgtgatgtttttttattgtcttttcata 46080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 56445108 - 56445208
Alignment:
Q  16 attcatattattttatgagttaagtttaataga-tttagaccatagttttatttcaattgtgatg--tttttattgtcttttcataattaaagtgcgggt 112  Q
    |||||||||||||| |||||| | ||||| | | ||| || ||||||||||||||||||||| ||  |||||||| |||||||||   ||||||||||||    
T  56445108 attcatattattttgtgagttgattttaaaaaaatttggatcatagttttatttcaattgtggtgtttttttattatcttttcatggctaaagtgcgggt 56445207  T
Q  113 a 113  Q
    |    
T  56445208 a 56445208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 44808568 - 44808532
Alignment:
Q  72 ttgtgatgtttttattgtcttttcataattaaagtgc 108  Q
    ||||||||||||||||||||||| |||||||||||||    
T  44808568 ttgtgatgtttttattgtctttttataattaaagtgc 44808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 46030380 - 46030320
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||| ||||||||||||||||||| |||||||   ||||||||  |||||||||||||    
T  46030380 gaccataattttatttcaattgtgatgcttttattcctttttcatagctaaagtgcgggta 46030320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 1758030 - 1758100
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacgaaagtac 175  Q
    ||||||||||| ||||||||||||||||| | ||||  ||||  | |||||||||||||| ||||| ||||    
T  1758030 gtgcgggtatgggcacttaggtacccatagggtatggggaagggccctaaagttgttgcccacgaaggtac 1758100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 33733499 - 33733442
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||| |||||||||||||||| ||||||||||||||   ||||||||||||    
T  33733499 catagttttatt-caattgtgatgttttttattgtcttttcatagagaaagtgcgggta 33733442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 23349381 - 23349442
Alignment:
Q  56 catagttttatttcaattgtgatg----tttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| ||    ||||||||||| ||||||| ||||| ||||||||    
T  23349381 catagttttatttcaattgtggtggttttttttattgtcatttcatagttaaaatgcgggta 23349442  T

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Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 19873241 - 19873144
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19873241 attcatattattttatgagttaattttaaaagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcaggta 19873144  T

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Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 48080226 - 48080113
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||     
T  48080226 ttgactaaatactacgattcatattattttatgagttaattttaaaagatgtagaccatagttttatttcaattgtgatatttttattgtcttttcatag 48080127  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  48080126 ttaaagtgcgggta 48080113  T

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Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50508815 - 50508928
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||| ||||||| |||||||||||||||||||| ||||| || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  50508815 ttgattaaatactacaattcatattattttatgcgttaatttaaaaagatttagaccataattttatttcaattgtgatgtttttattgtcttttcatag 50508914  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  50508915 ttaaagtgcgggta 50508928  T

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Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 33558754 - 33558902
Alignment:
Q  21 tattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatgtgcac 120  Q
    |||||||||||||||||| ||||| | ||||  | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||    
T  33558754 tattattttatgagttaattttaaaatattttaatcatagttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtacggacac 33558853  T
Q  121 ttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    |||| |||||||| ||||||  ||||  | |||||||||||||| ||||    
T  33558854 ttagatacccataggatatggggaagggcactaaagttgttgcccacga 33558902  T

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Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 5040999 - 5041107
Alignment:
Q  3 gactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatt 101  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  5040999 gactaaatatcacaattcatattattttataagttaattttaaaatattttgaccatagttttatttcaattgtgatgtttttattatcttttcatagtt 5041098  T
Q  102 aaagtgcgg 110  Q
    |||||||||    
T  5041099 aaagtgcgg 5041107  T

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Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39952676 - 39952573
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||| ||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  39952676 ttgattaaatactacaatttatattattttatgagttaattttaaaagatttagaccatagttttatttcaattgtgatgtttttactgtcttttcatag 39952577  T
Q  100 ttaa 103  Q
    ||||    
T  39952576 ttaa 39952573  T

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Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 11671884 - 11671788
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11671884 attcgtattattttatgagttaattttaaaatattt-gaccatagttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 11671788  T

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Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22845073 - 22845183
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||||||| |||||||||||||||||| || || | |||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  22845073 ttgactaaatactacaattcgtattattttatgagttaatttaaaaaaatttggaccatagttttatttcaaatgtgatgtttttattgtcttttcatag 22845172  T
Q  100 ttaaagtgcgg 110  Q
    ||||| |||||    
T  22845173 ttaaaatgcgg 22845183  T

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Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 2150646 - 2150731
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcg 109  Q
    ||||||||||||| | || || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2150646 tattttatgagttgatttgaaaatatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcg 2150731  T

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Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 12905763 - 12905670
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcg 109  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||    
T  12905763 attcatattattttatgagttaattttaaaagatgtagaccatagttttatttcaattgtgatatttttgttgtcatttcatagttaaagtgcg 12905670  T

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Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 40564091 - 40563994
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  40564091 attcgtattatttgatgagttaattttaaaatatttagaccatagttttatttcaattgtgatgtttttattttcttttcattgttaaagtgcgggta 40563994  T

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Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 23298273 - 23298365
Alignment:
Q  3 gactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtctttt 94  Q
    |||||||||| || |||| |||||||||||||||||| ||||| | | || ||||||||||||||||||||||||||||||||||||||||||    
T  23298273 gactaaatactacgattcgtattattttatgagttaattttaaaataatttgaccatagttttatttcaattgtgatgtttttattgtctttt 23298365  T

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Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 35203361 - 35203289
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatgtgcacttaggt 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  35203361 accatagttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggtatgggcactaaggt 35203289  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 25467651 - 25467556
Alignment:
Q  4 actaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcata 98  Q
    ||||||||| || |||| ||||||||||| |||||| ||||| |||||| || |||| ||||||||||||||||||||||||||||| ||||||||    
T  25467651 actaaatactacgattcgtattattttattagttaattttaaaagattttgatcataattttatttcaattgtgatgtttttattgttttttcata 25467556  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 19618833 - 19618736
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| || ||||| ||||||||||||||    
T  19618833 attcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgttttatcatagttaaagtgcgggta 19618736  T

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Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 27346677 - 27346592
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatg 140  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||||  |||||||| ||||||    
T  27346677 cataattttatttcaattgtggtgttttttattgtcttttcatgattaaagtgcgggtatgggcacttaattacccataggatatg 27346592  T

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Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 24987367 - 24987463
Alignment:
Q  17 ttcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| |||| ||||||||||||||    
T  24987367 ttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatagttaaagtgcgggta 24987463  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6408739 - 6408625
Alignment:
Q  1 ttgactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    ||||||||||| ||| |||||||||||||||| |||||| ||||| | |||  || | ||||||||||||| ||||||||| |||| |||| ||||||||    
T  6408739 ttgactaaatatcacgattcatattattttattagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgttttttcata 6408640  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  6408639 gttaaagtgcgggta 6408625  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 25630266 - 25630368
Alignment:
Q  5 ctaaatacacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaa 104  Q
    |||||||||| ||||||| || |||||||||| | |  || |  ||| |||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  25630266 ctaaatacacgattcatactactttatgagttgattgaaaaacttttggaccataggtttatttcaattgtgatgtttttattgttttttcatagttaaa 25630365  T
Q  105 gtg 107  Q
    |||    
T  25630366 gtg 25630368  T

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Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 33099756 - 33099698
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggt 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  33099756 accatagttttatttcaattgtgatatttttattgtcttttcatagttaaagtgagggt 33099698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39352624 - 39352512
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||||| || | ||||||||     
T  39352624 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgat-tttttttttttttttcatag 39352526  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  39352525 ttaaagtgcgggta 39352512  T

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Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 45079164 - 45079246
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcat 97  Q
    |||||||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  45079164 attcatattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcat 45079246  T

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Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 50622251 - 50622316
Alignment:
Q  51 tagaccatagttttatttcaattgtgatg--tttttattgtcttttcataattaaagtgcgggtat 114  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  50622251 tagatcatagttttatttcaattgtgatgtttttttattgtcttttcatagttaaagtgtgggtat 50622316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 26787597 - 26787653
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  26787597 catagttttatttcaatggtgatgtttttattgtctttt-ataattaaagtgtgggta 26787653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 42881450 - 42881390
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||||||||||||||||| ||| | | ||||||| ||||||    
T  42881450 gaccatagttttatttcaattgtgatgtttttattgtccttttacagttaaagtacgggta 42881390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 46819271 - 46819211
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||  ||||||| |||||    
T  46819271 gaccatagttttatttcaattgtgatgtttttattcttttttcatagctaaagtgtgggta 46819211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 41410216 - 41410299
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcata 98  Q
    ||||||| |||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||    
T  41410216 attcatactattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcata 41410299  T

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Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 41924111 - 41924020
Alignment:
Q  23 ttattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||| ||||| | ||| ||| | ||||||||||||| ||||||||| |||| |||| ||| |||| ||||||||||||||    
T  41924111 ttattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgtttttttttgtttttccatagttaaagtgcgggta 41924020  T

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Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 42096741 - 42096799
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||    
T  42096741 catagttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggta 42096799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50481013 - 50481120
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| |||||      ||||||||     
T  50481013 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatattttt------ttttcatag 50481106  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  50481107 ttaaagtgcgggta 50481120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 14418336 - 14418283
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtat 114  Q
    ||||| |||||||||||| |||||||| |||||||||| |||||||||||||||    
T  14418336 ttttaattcaattgtgatatttttattatcttttcatagttaaagtgcgggtat 14418283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 2013053 - 2013105
Alignment:
Q  56 catagttttatttcaattgtgat-gtttttattgtcttttcataattaaagtg 107  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  2013053 catagttttatttcaattgtgatattttttattgtctttttataattaaagtg 2013105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 8340251 - 8340192
Alignment:
Q  56 catagttttatttcaattgtgatg--tttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||| ||||| ||||||||    
T  8340251 catagttttatttcaattgtggtggttttttattgtcttttcatagttaaaatgcgggta 8340192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 9162996 - 9163048
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtg 107  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  9162996 catagttttattttaattgtgatgttttttattgtctttttataattaaagtg 9163048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 33119000 - 33118952
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaa 103  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  33119000 catagttttatttcaattgtgatgttttttattgtctttttataattaa 33118952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 35688452 - 35688353
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtga--tgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | || ||    ||| || |||||||||||||||||||||   | ||||||||||||||||||| ||||| ||||||||    
T  35688452 attcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttttattgtcttttcatagttaaaatgcgggta 35688353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44792581 - 44792665
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    
T  44792581 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttt 44792665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 27064301 - 27064243
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||| ||||||| |||||||| ||||| |||||||||||| |||||    
T  27064301 catagttttatttcaatggtgatgttttttattgcctttttataattaaagtgtgggta 27064243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 30248053 - 30248111
Alignment:
Q  56 catagttttatttcaattgtgatgtt-tttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||| || |||||||||||||||||   ||||||||||||    
T  30248053 catagttttatttcaattgtgatattatttattgtcttttcatagagaaagtgcgggta 30248111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 48583838 - 48583780
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||||||| ||||||| |||||||||||||  ||||||||||||||    
T  48583838 cataattttatttcaattgtggtgttttttattgtcttttcatggttaaagtgcgggta 48583780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 54444354 - 54444452
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    ||||||| ||||||||||||| | || || |   || |||||||||||||||||||| || || |||| ||||||||||||||| ||||||||| ||||    
T  54444354 attcatactattttatgagttgatttgaaaattcttggaccatagttttatttcaatcgtaatattttttattgtcttttcatagttaaagtgctggta 54444452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 7940431 - 7940382
Alignment:
Q  64 tatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||| | ||||||||||  |||||||||||||    
T  7940431 tatttcaattgtgatgtttttactatcttttcatagctaaagtgcgggta 7940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 46584783 - 46584717
Alignment:
Q  49 tttagaccatagttttatttcaat--tgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||| | |||||||||||||  |||||| |||||||| |||||||||| ||||| ||||||||    
T  46584783 tttagaccgtcgttttatttcaattgtgtgatatttttattatcttttcatagttaaattgcgggta 46584717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 49193628 - 49193543
Alignment:
Q  1 ttgactaaataca-caattcatattattttatgagttaagtttaata-gatttagaccatagttttatttcaattgtgatgttttt 84  Q
    ||||||||||||| |||||| |||||||||| | ||| | ||||| | |||||||| ||||||||||||| |||| |||| |||||    
T  49193628 ttgactaaatacaacaattcgtattattttacgtgttgattttaaaaagatttagatcatagttttatttaaattatgatattttt 49193543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 25467532 - 25467468
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||| |||||||| ||||||  ||||  | |||||||||||||| ||||    
T  25467532 gtgcgggtatgagcacttagatacccataagatatggggaagggcactaaagttgttgcccacga 25467468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 49360119 - 49360035
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| || |||||| |||||||||||||||| ||||| | |||  || | ||||||||||||| || |||| |||||    
T  49360119 ttgactaaataccacgattcatgttattttatgagttaattttaaaaaattgggatcgtagttttatttcatttatgatattttt 49360035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19643453 - 19643566
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||  ||||||  |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  19643453 ttgactaaataatacaatttgtattattttatgagttaattttaaaagatttagaccatagttttttttcaattgtgatgtttttattgtcttttcatag 19643552  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  19643553 ttaaagtgcgggta 19643566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6109791 - 6109678
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || || | ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  6109791 ttgactaaatactacgatccgtattattttataagttaattttaaaagatttagaccatagttttatttcaattgtgatatttttattgtcttttcatag 6109692  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  6109691 ttaaagtgcgggta 6109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 2620902 - 2621013
Alignment:
Q  3 gactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatt 101  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| | |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||    
T  2620902 gactaaatatcacaattcatattattttataagttaattttaaaatattttgaccattgttttatttcaattgtgatgtttttattatcttttcatagtt 2621001  T
Q  102 aaagtgcgggta 113  Q
    ||||||||||||    
T  2621002 aaagtgcgggta 2621013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 2472237 - 2472332
Alignment:
Q  17 ttcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggt 112  Q
    |||||||||||||||||||||| ||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||    
T  2472237 ttcatattattttatgagttaattttaaaagatttataccgtagttttattttaattgtgatgtttttattgtcttttaatagttaaagtacgggt 2472332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 24891392 - 24891470
Alignment:
Q  35 ttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  24891392 ttaattttaaaagatttaaaccatagttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgggta 24891470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 25500280 - 25500202
Alignment:
Q  35 ttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  25500280 ttaattttaaaagatttaaaccatagttttatttcaattgtgatgtttttattgtcttttcatatttaaagtgcaggta 25500202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 30801402 - 30801309
Alignment:
Q  14 caattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtg 107  Q
    ||||||||||||||||||||||||| ||||| | | || ||| |||||| |||||||||||||||||||| |||||||||||||| ||||||||    
T  30801402 caattcatattattttatgagttaattttaaaaaaattggactatagttctatttcaattgtgatgttttcattgtcttttcatagttaaagtg 30801309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 25419401 - 25419323
Alignment:
Q  35 ttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| ||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||    
T  25419401 ttaattttaaaagatttaaaccatagttttatttcaactgtgatgtttttattttcttttcatagttaaagtgcaggta 25419323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7057773 - 7057665
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||| | |||| |  ||||||| |||||||||| ||||||||| ||||| ||||||||     
T  7057773 ttgactaaatactacaattcatactattttatgagttaattttaaaaaattt-ggtcatagttctatttcaattatgatgttttcattgttttttcatag 7057675  T
Q  100 ttaaagtgcg 109  Q
    ||||||||||    
T  7057674 ttaaagtgcg 7057665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 26561193 - 26561276
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcg 109  Q
    ||||||||||||||| ||||| | |||  |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  26561193 tattttatgagttaa-tttaaaaaattg-gaccatagttttatatcaattgtgatgtttttattgtcttttcatagttaaagtgcg 26561276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1376357 - 1376241
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt---ttttattgtcttttca 96  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||   |||| |||| ||||||    
T  1376357 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttttgttttttca 1376258  T
Q  97 taattaaagtgcgggta 113  Q
    || ||||||||||||||    
T  1376257 tagttaaagtgcgggta 1376241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 24789682 - 24789568
Alignment:
Q  1 ttgactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    ||||||||||| |||  ||||| |||||||||||||||| ||||| | ||| ||| | ||||||||||||| ||||||||| |||| |||| ||| ||||    
T  24789682 ttgactaaatatcacggttcatgttattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgtttttttttgtttttccata 24789583  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  24789582 gttaaagtgcgggta 24789568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3616809 - 3616917
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| |||||   |||  || |||||||||||     ||||||||||||| |||| ||||||||     
T  3616809 ttgactaaataccacgattcatattattttatgagttaattttaaataattgggatcatagttttat-----ttgtgatgttttttttgttttttcatag 3616903  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  3616904 ttaaagtgcgggta 3616917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 43511342 - 43511253
Alignment:
Q  19 catattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgc 108  Q
    |||| ||||||||||||| | || || | ||||  |||||| ||||||||||||||| || ||||||||||||||||||| |||||||||    
T  43511342 catactattttatgagttgatttgaaaaaatttgaaccataattttatttcaattgttatatttttattgtcttttcatagttaaagtgc 43511253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20216321 - 20216263
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  20216321 catagttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggta 20216263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20235919 - 20235861
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  20235919 catagttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggta 20235861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 45553181 - 45553123
Alignment:
Q  55 ccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||||| ||| ||||    
T  45553181 ccatagttttatttcaattgtgatgttctttttgtcttttcatagttaaaatgcaggta 45553123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 15961668 - 15961724
Alignment:
Q  58 tagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||    
T  15961668 tagttttattttaattgtgatgttttttattgtctttttataattaaaatgcgggta 15961724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 43239297 - 43239238
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||| ||||| |||||||||||| |||||||| |||||||||| ||||||||| ||||    
T  43239297 accataattttagttcaattgtgatatttttattatcttttcatagttaaagtgcaggta 43239238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 37226768 - 37226822
Alignment:
Q  57 atagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgg 110  Q
    |||||||||||||||| |||||| |||||||||||||||  ||||||||||||||    
T  37226768 atagttttatttcaatcgtgatgttttttattgtctttttgtaattaaagtgcgg 37226822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 38551679 - 38551565
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaa 154  Q
    |||||||||||||||| |||| || |||||||| ||||| |||   ||||||||||||||| ||||||| || |||||| | ||||  ||||  | ||||    
T  38551679 catagttttatttcaaatgtggtgatttttattatctttccatggctaaagtgcgggtatgggcacttaagtgcccatagggtatggggaagggcgctaa 38551580  T
Q  155 agttgttgcctacga 169  Q
    |||||||||| ||||    
T  38551579 agttgttgcccacga 38551565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 25178952 - 25179011
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||| ||||| ||||||||||  |||| || ||||| ||||||||    
T  25178952 accatagttttatttcaatggtgatatttttattgttgtttcttagttaaaatgcgggta 25179011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 859616 - 859558
Alignment:
Q  56 catagttttatttcaattgtgatgtttttatt-gtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | ||||| || ||||||||||| ||||| ||||||||    
T  859616 catagttttatttcaattgtggtttttttttttgtcttttcatagttaaaatgcgggta 859558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 15542247 - 15542190
Alignment:
Q  58 tagttttatttcaattgtgatgt--ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||| |||||||||||  |||||||| ||||| ||||||||||||| ||||    
T  15542247 tagttttattttaattgtgatgtttttttattgcctttttataattaaagtgcaggta 15542190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 39221561 - 39221615
Alignment:
Q  60 gttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||| |||||| ||||||||||||||  ||||||||||||||    
T  39221561 gtttaatttcaattgtggtgttttttattgtcttttcatggttaaagtgcgggta 39221615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 98
Target Start/End: Complemental strand, 7580169 - 7580125
Alignment:
Q  56 catagttttatttcaattgtgatg--tttttattgtcttttcata 98  Q
    |||| |||||||||||||||||||  |||||||||||||||||||    
T  7580169 catatttttatttcaattgtgatgcttttttattgtcttttcata 7580125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 222034 - 221970
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||||| |||||| | ||||  |||| || |||||||||||||| ||||    
T  222034 gtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacga 221970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 222098 - 222039
Alignment:
Q  56 catagttttatttcaattgtgatgtttttatt--gtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | ||||| ||  ||||||||||| ||||| ||||||||    
T  222098 catagttttatttcaattgtggttttttttttttgtcttttcatagttaaaatgcgggta 222039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 691189 - 691125
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||||| |||||| | ||||  |||| || |||||||||||||| ||||    
T  691189 gtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacga 691125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 691253 - 691194
Alignment:
Q  56 catagttttatttcaattgtgatgtttttatt--gtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | ||||| ||  ||||||||||| ||||| ||||||||    
T  691253 catagttttatttcaattgtggttttttttttttgtcttttcatagttaaaatgcgggta 691194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 735657 - 735593
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||||| |||||| | ||||  |||| || |||||||||||||| ||||    
T  735657 gtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacga 735593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 735721 - 735662
Alignment:
Q  56 catagttttatttcaattgtgatgtttttatt--gtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | ||||| ||  ||||||||||| ||||| ||||||||    
T  735721 catagttttatttcaattgtggttttttttttttgtcttttcatagttaaaatgcgggta 735662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 859553 - 859489
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||||| |||||| | ||||  |||| || |||||||||||||| ||||    
T  859553 gtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacga 859489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 1667307 - 1667243
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| ||||||||||||||||| | ||||  ||||  | |||||||||||||| ||||    
T  1667307 gtgcgggtatgggcacttaggtacccatagggtatggggaagggcactaaagttgttgcccacga 1667243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7842734 - 7842621
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||  |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  7842734 ttgactaaatactacgatttgtattattttatgagttaattttaagagatttagaccatagttttatttcaagtgtgatgtttttattgtcttttcatag 7842635  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  7842634 ttaaagtgcgggta 7842621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32835450 - 32835563
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||| |||||||||||||||||||     
T  32835450 ttgactaaataccacgattcatattattttatgagttaattttaaaagatgtaaaccatagttttatttcaattgtgatatttttattgtcttttcatag 32835549  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  32835550 ttaaagtgcgggta 32835563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 19996615 - 19996728
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||  |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  19996615 ttgactaaatactacgatttgtattattttatgagttaattttaaaagatttagatcatagttttatttcaattgtgatgtttttattgtcttttcatag 19996714  T
Q  100 ttaaagtgcgggta 113  Q
    | ||||||||||||    
T  19996715 tcaaagtgcgggta 19996728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 21260687 - 21260856
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| ||||||||||| |||||| ||||| |||||| || |||| |||| |||||||||||||||||||||||| ||||||||     
T  21260687 ttgactaaatactacgattcgtattattttattagttaattttaaaagattttgatcataattttgtttcaattgtgatgtttttattgttttttcatag 21260786  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    |||||||| |||||||||||| ||| ||||||||  || ||  |||| || |||||||||||||| ||||    
T  21260787 ttaaagtgtgggtatgtgcacatagatacccatagaatgtggggaaggacactaaagttgttgcccacga 21260856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29512152 - 29512265
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||| ||||||| |||||||||| ||||||||||||||| ||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||     
T  29512152 ttgattaaatactacaattcatactattttatgagttaattttaaaaaaattggaccatagttttatttcaattgtgatgtttttattgtcttttcatag 29512251  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  29512252 ttaaagtgcgggta 29512265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 945648 - 945535
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||  |||||||||||||||||  ||||| | |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  945648 ttgactaaatactacgatttgtattattttatgagttagttttaaaatattttgaccatagttttatttcaattgtgatgtttttattgtctttttataa 945549  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  945548 ttaaagtgcgggta 945535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25059269 - 25059156
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| |||||||||||||||||| ||||| | |||| ||||||||||||||||||||||| ||||||||| ||||||||||||     
T  25059269 ttgactaaatactacgattcgtattattttatgagttaattttaaaatattttgaccatagttttatttcaattgtaatgtttttaatgtcttttcatag 25059170  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  25059169 ttaaagtgcgggta 25059156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 19506550 - 19506438
Alignment:
Q  3 gactaaatac-acaattcatattatttt-atgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataat 100  Q
    |||||||||| ||||||||||||||||| || |||||| ||||| | |||| ||||||||||||||||||||||||||||||||||| |||||||||| |    
T  19506550 gactaaatactacaattcatattatttttataagttaattttaaaatattttgaccatagttttatttcaattgtgatgtttttattatcttttcatagt 19506451  T
Q  101 taaagtgcgggta 113  Q
    ||||||| |||||    
T  19506450 taaagtgtgggta 19506438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 38491513 - 38491405
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgt 160  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| | ||||  ||||    ||||||||||    
T  38491513 ttttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggtatgggcacttagatacccatagggtatggggaagggtactaaagttgt 38491414  T
Q  161 tgcctacga 169  Q
    |||||||||    
T  38491413 tgcctacga 38491405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 610852 - 610765
Alignment:
Q  26 ttttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||| ||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  610852 ttttatgagttaattttaaaaaatttggaccataattttatttcaattgtgatgtttttattgtcttttcatagttaaagtgcgggta 610765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12560555 - 12560670
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||||||||     
T  12560555 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgttttttcatag 12560654  T
Q  100 ttaaagtgcgggtatg 115  Q
    ||||||||||||||||    
T  12560655 ttaaagtgcgggtatg 12560670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2978585 - 2978474
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| ||||||||||| |||||| ||||| | |||| |||||  |||||||||||||||||||||||||||||||||||||||     
T  2978585 ttgactaaatactacgattcgtattattttataagttaattttaaaatattttgacca--gttttatttcaattgtgatgtttttattgtcttttcatag 2978488  T
Q  100 ttaaagtgcgggta 113  Q
    |||||||| |||||    
T  2978487 ttaaagtgggggta 2978474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 424739 - 424626
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| |||||||||||||||||| ||| | | |||  |||| ||||||||||||| |||||||||||||||||||||||||||     
T  424739 ttgactaaatactacgattcgtattattttatgagttaatttttaaaaattgggaccgtagttttatttcatttgtgatgtttttattgtcttttcatag 424640  T
Q  100 ttaaagtgcgggta 113  Q
    |||||||| |||||    
T  424639 ttaaagtgtgggta 424626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13797011 - 13797116
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||| | | || ||||||| |||||||||||||||||||||||||||  ||||||||||    
T  13797011 ttgactaaatactacaattcatactattttatgagttaattttaaaaaaattggaccataattttatttcaattgtgatgtttttattcccttttcataa 13797110  T
Q  100 ttaaag 105  Q
     |||||    
T  13797111 ctaaag 13797116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 38491593 - 38491512
Alignment:
Q  4 actaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    ||||||||| || ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  38491593 actaaatactacgattcatattattttatgagttaattttaaaagatttataccatagttttatttcaattgtgatgttttt 38491512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 2975188 - 2975297
Alignment:
Q  3 gactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatt 101  Q
    |||||||||| || |||| ||||||||||| |||||| ||||| | |||| |||||  ||||||||||||||||||||||||||||||||||||||| ||    
T  2975188 gactaaatactacgattcgtattattttataagttaattttaaaatattttgacca--gttttatttcaattgtgatgtttttattgtcttttcatagtt 2975285  T
Q  102 aaagtgcgggta 113  Q
    |||||| |||||    
T  2975286 aaagtgggggta 2975297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 973624 - 973567
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  973624 gaccgtagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 973567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 10786331 - 10786272
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  10786331 accatagttttatttcaattgtgatatttttattgtcttttcataattaaagtacgggta 10786272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 236535 - 236453
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttt 82  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||| | |||| |||||||||| |||||||||||||||||||    
T  236535 ttgactaaatactacaattcatattattttatgaattaattttaaaaaatttggaccatagttctatttcaattgtgatgttt 236453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 29054544 - 29054658
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttta-ttgtcttttcata 98  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | ||| | | | ||||||||||||| |||||||||||||| || | ||||||||    
T  29054544 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgacatcgtagttttatttcatttgtgatgtttttatttattttttcata 29054643  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  29054644 gttaaagtgcgggta 29054658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 9222411 - 9222298
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  9222411 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 9222312  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  9222311 ttaaagtgcgggta 9222298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 4893235 - 4893345
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   |    
T  4893235 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 4893334  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  4893335 aagtgcgggta 4893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 29185252 - 29185142
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || ||||||||||||||||||||||||| ||||||||||||||||||   |    
T  29185252 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 29185153  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  29185152 aagtgcgggta 29185142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 40094515 - 40094631
Alignment:
Q  56 catagttttatttcaattgtg---atgtttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactct 152  Q
    |||||||||||||||||||||    | ||||||||||||||||||| ||||| |||||||||| |||||||||| |||||| | ||||  ||||  | ||    
T  40094515 catagttttatttcaattgtggatttttttttattgtcttttcatagttaaaatgcgggtatgggcacttaggtgcccatagggtatggggaagggcact 40094614  T
Q  153 aaagttgttgcctacga 169  Q
    |||||||||||| ||||    
T  40094615 aaagttgttgcccacga 40094631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44327871 - 44327982
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||  ||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||||||||     
T  44327871 ttgactaaataccacgattcatattatttt--gagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgttttttcatag 44327968  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  44327969 ttaaagtgcgggta 44327982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 27783665 - 27783537
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| ||||     | ||||||||     
T  27783665 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatatttt-----ttttttcatag 27783571  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccata 133  Q
    || ||||||||||||| ||||| |||||||||||    
T  27783570 ttgaagtgcgggtatgggcactgaggtacccata 27783537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 28221135 - 28221023
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||| ||||||| ||||||| |||||||| || |||| | ||||| |||||| || |||| ||| ||||||||||||||||||| ||||| ||||||||     
T  28221135 ttgattaaatactacaattcgtattatttcattagttcattttaaaagattttgatcataattt-atttcaattgtgatgttttcattgttttttcatag 28221037  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  28221036 ttaaagtgcgggta 28221023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 31873297 - 31873357
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggtatg 115  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  31873297 catagttttatttcaattgtgatgttttttattgtctttttataattaaagtgtgggtatg 31873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 3821270 - 3821325
Alignment:
Q  56 catagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgg 110  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  3821270 catagttttatttcaattgtgatgttttttattgtcttttcatagttaaagtgcgg 3821325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 43634448 - 43634561
Alignment:
Q  4 actaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtt---tttattgtcttttcataa 99  Q
    ||||||||| || ||||||||||||||||||||||| ||||| | ||| ||| | ||||||||||||| ||||||||||   ||| |||| ||||||||     
T  43634448 actaaataccacgattcatattattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgttttattttttgtattttcatag 43634547  T
Q  100 ttaaagtgcgggta 113  Q
    |||||||| |||||    
T  43634548 ttaaagtgggggta 43634561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 35978448 - 35978562
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    |||||||||||| || ||||||| ||||||||||||||| ||||| | ||| ||| | ||||||||| ||| ||||||||| |||| |||| |||| |||    
T  35978448 ttgactaaataccacgattcatactattttatgagttaattttaaaaaattgagatcgtagttttatatcatttgtgatgtgtttttttgtttttttata 35978547  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  35978548 tttaaagtgcgggta 35978562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13312903 - 13312788
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt--ttttattgtcttttcat 97  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||  |||| |||| ||| |||    
T  13312903 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttttgtttttccat 13312804  T
Q  98 aattaaagtgcgggta 113  Q
    | ||||||||||||||    
T  13312803 agttaaagtgcgggta 13312788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 2465517 - 2465599
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagt 106  Q
    ||||||||||||| | || || | ||||  ||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||    
T  2465517 tattttatgagttgatttgaaaaaatttgaaccatagttttattttaattgtgatatttttattgtcttctcatagttaaagt 2465599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 16177066 - 16177120
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcg 109  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  16177066 catagttttatttcaatggtgatgttttttattgtctttttataattaaagtgcg 16177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20415081 - 20415023
Alignment:
Q  56 catagttttatttcaattgtgatgt-ttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||    
T  20415081 catagttttatttcaattgtgatgttttttattgtcttttcatagagaaagtgcgggta 20415023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 30489779 - 30489721
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||    
T  30489779 catagttttatttcaattatgatgttttttattgactttttataattaaagtgcgggta 30489721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 31646254 - 31646351
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | || ||    ||| || |||||||||||||||||||||   ||||| ||||||||||||| ||||| ||||||||    
T  31646254 attcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttgttgtcttttcatagttaaaatgcgggta 31646351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 40045068 - 40044992
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttt 93  Q
    ||||||| ||||||||||||| | || || | | || ||||||||||||||| |||||||||||||||||||||||||    
T  40045068 attcatactattttatgagttgatttaaaaaaaatt-gaccatagttttattacaattgtgatgtttttattgtcttt 40044992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33794337 - 33794450
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt----ttttattgtcttttc 95  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||| |  || ||| | ||||||||||||| ||||||| |    |||| |||| ||||     
T  33794337 ttgactaaataccacaattcatattattttatgaattaattttaaaaatttgagatcgtagttttatttcatttgtgattttttgtttttttgtttttta 33794436  T
Q  96 ataattaaagtgcg 109  Q
    ||||||||||||||    
T  33794437 ataattaaagtgcg 33794450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 35659661 - 35659607
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcggg 111  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||| |||||||    
T  35659661 catagttttatttcaattgtgatgtttttattgt-atttcatagttaacgtgcggg 35659607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 33362838 - 33362948
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgat-gtttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||  ||||||||  |||||||||||||||||||   |    
T  33362838 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttatattgtgatattttttattgtcttttcatagaga 33362937  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  33362938 aagtgcgggta 33362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 31107635 - 31107695
Alignment:
Q  48 atttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcg 109  Q
    |||| ||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||||||||    
T  31107635 atttggaccataattttattttaattgtgatatttttattgtc-tttcatatttaaagtgcg 31107695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25815264 - 25815379
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg--tttttattgtcttttcat 97  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||| | ||| ||||  ||||| |||| ||| |||    
T  25815264 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttattttatttgcgatgttttttttttgtttttccat 25815363  T
Q  98 aattaaagtgcgggta 113  Q
    | ||||||||||||||    
T  25815364 agttaaagtgcgggta 25815379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 32888169 - 32888105
Alignment:
Q  80 tttttattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaaga 144  Q
    ||||||||  ||||||||| ||||||||||||| ||||||||||||| ||| || | ||||||||    
T  32888169 tttttattaacttttcatagttaaagtgcgggtgtgtgcacttaggtgcccgtagggtatgaaga 32888105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 42069081 - 42069149
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| |||||    
T  42069081 attcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgattttttt 42069149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 48985243 - 48985185
Alignment:
Q  57 atagttttatttcaattgtg--atgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||  || ||||||||||||||||| | ||||| ||||||||    
T  48985243 atagttttatttcaattgtgatatttttttattgtcttttcacagttaaaatgcgggta 48985185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 83
Target Start/End: Complemental strand, 2433377 - 2433347
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttt 83  Q
    |||||||||||||||||||||||||||||||    
T  2433377 gaccatagttttatttcaattgtgatgtttt 2433347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 8981564 - 8981615
Alignment:
Q  60 gttttatttcaattgtgatg----tttttattgtcttttcataattaaagtg 107  Q
    ||||||||||||||||||||    ||||||||||||||||||| ||||||||    
T  8981564 gttttatttcaattgtgatgtttttttttattgtcttttcatagttaaagtg 8981615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 9473065 - 9473007
Alignment:
Q  53 gaccatagttttattt-caattgtgatgt-ttttattgtcttttcataattaaagtgcg 109  Q
    ||||||| |||||||| |||||||||| | |||||||||||||||||| ||||||||||    
T  9473065 gaccataattttattttcaattgtgatatattttattgtcttttcatagttaaagtgcg 9473007  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 30622963 - 30623044
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagt 106  Q
    ||||||||||||| | || || |  ||| |||||||| ||||||||||| ||||| |||||||||| |||||||| |||||||    
T  30622963 tattttatgagttgatttgaaaatttttggaccatagatttatttcaatcgtgatatttttattgt-ttttcatagttaaagt 30623044  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 46772479 - 46772536
Alignment:
Q  56 catagttttatttcaattgtgat-gtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||||||||||| ||||    
T  46772479 catagttttatttcaattgtgatattttttattatctttt-ataattaaagtgctggta 46772536  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 45816547 - 45816510
Alignment:
Q  60 gttttatttcaattgtgatgtttttattgtcttttcat 97  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  45816547 gttttatttaaattgtgatatttttattgtcttttcat 45816510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 29426371 - 29426435
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||||| |||||||| ||||  ||||  | |||||||||||||| ||||    
T  29426371 gtgcgggtatgggcacttaggtgcccatatggtatggggaagggcactaaagttgttgcccacga 29426435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 667926 - 668020
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  667926 attcatattattttatgagttaattttaaaagatgtagaccatagttttatttcaattgtgatatttttattgtcttttcatagttaaagtgcgg 668020  T

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Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 15150182 - 15150262
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttca 96  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15150182 attcatattattttatgagttaattttaaaagatttagaccataattttatttcaattgtgatgtttttatcgtcttttca 15150262  T

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Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 29155466 - 29155368
Alignment:
Q  15 aattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||| ||||||||||||||| || || | | || ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  29155466 aattcatactattttatgagttaatttaaaaaaaattggaccatagttttatttcaattgtgatgtttttaatgtcttttcatagttaaagtgcgggta 29155368  T

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Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13142511 - 13142624
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | ||| ||| | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  13142511 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgttttttttgtttttccatag 13142610  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  13142611 ttaaagtgcgggta 13142624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 44070375 - 44070490
Alignment:
Q  20 atattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtctttt--cataattaaagtgcgggtatgtg 117  Q
    ||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| || | ||||  |||| |||||||||||||||| |    
T  44070375 atattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttttgtttttccatagttaaagtgcgggtatggg 44070474  T
Q  118 cacttaggtacccata 133  Q
    ||||||||||||||||    
T  44070475 cacttaggtacccata 44070490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 12757877 - 12757818
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12757877 accatagttttatttcatttgtgatatttttattgtcttttcataattaaagtgcgggta 12757818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 20937152 - 20937097
Alignment:
Q  58 tagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20937152 tagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgtgggta 20937097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 4592157 - 4592246
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||| |||||   |||| ||||  |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  4592157 tattttatgagttaattttaaacaatttggacctcagttttatttcaattgtgatatttttattttcttttcatagttaaagtgcgggta 4592246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 32422680 - 32422793
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  32422680 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 32422779  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  32422780 ttaaagtgcgggta 32422793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 38620557 - 38620444
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  38620557 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 38620458  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  38620457 ttaaagtgcgggta 38620444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 16711335 - 16711392
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgg 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  16711335 gaccatagttttatttcaattatgatgtttttattgtcttttcatatttaaagagcgg 16711392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30241594 - 30241481
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | || |||||||| | |||||||||| || |||| ||||||||     
T  30241594 ttgactaaatactacgattcatattattttatgagttaattttaaaaaattgggatcgtaattttattttatttgtgatgttctttttgttttttcatag 30241495  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  30241494 ttaaagtgcgggta 30241481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 38958645 - 38958725
Alignment:
Q  24 tattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaag 105  Q
    ||||||||||||||  ||||| | |||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  38958645 tattttatgagttat-tttaaaaaatttggaccgtagttttattttaattgtgatgtttttattgtcttttcatagttaaag 38958725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10391583 - 10391682
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcata 98  Q
    |||||||||||| || |||||||||||||||| |||| | || ||||  ||| || | |||||||||||||||||||||| |||||||||||||||||||    
T  10391583 ttgactaaatactacgattcatattattttattagttgatttaaataattttggatcctagttttatttcaattgtgatgttttttattgtcttttcata 10391682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 4289802 - 4289692
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgat-gtttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||  |||||||||||||||||||   |    
T  4289802 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatattttttattgtcttttcatagaga 4289703  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  4289702 aagtgcgggta 4289692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 17154140 - 17154190
Alignment:
Q  54 accatagttttatttcaattgtgatgtttttattgtcttttcataattaaa 104  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17154140 accatagttttatttcaattgtgatatttttattgtcttttcatagttaaa 17154190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33867484 - 33867598
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcata 98  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||| ||||| |||| ||| ||||    
T  33867484 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgtttttccata 33867583  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  33867584 gttaaagtgcgggta 33867598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31440571 - 31440688
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaataga----tttagaccatagttttatttcaattgtgatgtttttattgtcttttc 95  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |    ||  || | ||||||||||||| ||||||||||||| |||| |||||    
T  31440571 ttgactaaataccacgattcatattattttatgagttaatttaaaaaaaaaaattaggatcgtagttttatttcatttgtgatgttttttttgttttttc 31440670  T
Q  96 ataattaaagtgcgggta 113  Q
    ||| ||||||||||||||    
T  31440671 atagttaaagtgcgggta 31440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 18974854 - 18974758
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtga--tgtttttattgtcttttcataattaaagtgcgg 110  Q
    ||||||||||||||||||||| | || ||    ||| || |||||||||||||||||||||   | ||||||||||||||||||||||||| |||||    
T  18974854 attcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtgggttttttttattgtcttttcataattaaaatgcgg 18974758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4481223 - 4481108
Alignment:
Q  1 ttgactaaata-cacaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtg--atgtttttattgtcttttcat 97  Q
    ||||||||||| |||  ||||| |||||||||||||||| ||||| | ||| ||| | ||||||||||||| |||||  || ||||| |||| ||| |||    
T  4481223 ttgactaaatatcacggttcatgttattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatattttttttttgtttttccat 4481124  T
Q  98 aattaaagtgcgggta 113  Q
    | ||||||||||||||    
T  4481123 agttaaagtgcgggta 4481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25424919 - 25424806
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgt-ttttattgtcttttcata 98  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | ||   || | ||||||||||||| ||||||||| |||| |||| ||| ||||    
T  25424919 ttgactaaataccacggttcatattattttatgagttaattttaaaaaatgg-gatcgtagttttatttcatttgtgatgtttttttttgtttttccata 25424821  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  25424820 gttaaagtgcgggta 25424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 35005457 - 35005514
Alignment:
Q  58 tagttttatttcaattgtgatgttt--ttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||| |||||  |||||||||||||||| |||||||| |||||    
T  35005457 tagttttatttcaattgtggtgtttgtttattgtcttttcatatttaaagtgtgggta 35005514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 3329336 - 3329243
Alignment:
Q  21 tattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    |||||||||||||||||| ||||| | |||  || ||||||||||||||| |||| ||| ||||| || | |||||||| |||||||| |||||    
T  3329336 tattattttatgagttaattttaaaaaattgggatcatagttttatttcatttgtaatgttttttttttttttttcatagttaaagtgtgggta 3329243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 15234421 - 15234361
Alignment:
Q  56 catagttttatttcaattgtgatg--tttttattgtcttttcataattaaagtgcgggtat 114  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||  ||||||||||||||    
T  15234421 catagttttgtttcaattgtgatgattttttattttcttttcatagataaagtgcgggtat 15234361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 668028 - 668092
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| ||||||||||||||||| ||||||  ||||  | |||||||||||||| ||||    
T  668028 gtgcgggtatgggcacttaggtacccataggatatggggaagggcactaaagttgttgcccacga 668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 40475284 - 40475332
Alignment:
Q  61 ttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgc 108  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  40475284 ttttatttcaattgtgatattttttattgtctttttataattaaagtgc 40475332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 40507631 - 40507679
Alignment:
Q  61 ttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgc 108  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  40507631 ttttatttcaattgtgatattttttattgtctttttataattaaagtgc 40507679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 41935582 - 41935646
Alignment:
Q  105 gtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||||||||| |||||||||| |||||| | ||||| |||| || |||||||||||||| ||||    
T  41935582 gtgcgggtatgagcacttaggtgcccatagggtatgaggaaggacactaaagttgttgcccacga 41935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 39767125 - 39767183
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||| ||| ||||| ||||| |||| |||||||||||| |||||    
T  39767125 catagttttatttcaattgcgatattttttattgtatttttataattaaagtgtgggta 39767183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 12429599 - 12429486
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||  |||||||||| | ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  12429599 ttgactaaatactacgatttgtattattttacgggttaattttaaaagatttagaccataattttatttcaattgtgatgtttttattgtcttttcatag 12429500  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  12429499 ttaaagtgcgggta 12429486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 31783918 - 31784053
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg--tttttattgtcttttcat 97  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | ||| ||| | ||||||||||||| ||||||||  ||||| |||| |||||||    
T  31783918 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgagatcgtagttttatttcatttgtgatgttttttttttgttttttcat 31784017  T
Q  98 aattaaagtgcgggtatgtgcacttaggtacccata 133  Q
    | |||||||||||||||| |||||||||||||||||    
T  31784018 agttaaagtgcgggtatgagcacttaggtacccata 31784053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 6938214 - 6938105
Alignment:
Q  4 actaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataatta 102  Q
    ||||||||| || |||| |||||||||||||||||| ||||| | |||||   ||||||||| ||||||||||||||||||||||||||||||||| |||    
T  6938214 actaaatactacgattcgtattattttatgagttaattttaaaatatttatgtcatagttttgtttcaattgtgatgtttttattgtcttttcatagtta 6938115  T
Q  103 aagtgcgggt 112  Q
    ||||||||||    
T  6938114 aagtgcgggt 6938105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29641397 - 29641540
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtt---tttattgtcttttca 96  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||   ||| |||| ||||||    
T  29641397 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttgttttttgttttttca 29641496  T
Q  97 taattaaagtgcgggtatgtgcacttaggtacccatatgatatg 140  Q
    || |||||||||||||||| |||||||||| |||||||| ||||    
T  29641497 tagttaaagtgcgggtatgggcacttaggtgcccatatggtatg 29641540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31511576 - 31511710
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttatt--gtcttttcat 97  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||  || | ||||||||||||| ||||||||||||| ||  || |||||||    
T  31511576 ttgactaaataccacgattcatattattttatgagttaatttcaaaaaattgggatcgtagttttatttcatttgtgatgttttttttttgttttttcat 31511675  T
Q  98 aattaaagtgcgggtatgtgcacttaggtacccat 132  Q
    | |||||||||||||||| |||||||||| |||||    
T  31511676 agttaaagtgcgggtatgggcacttaggtgcccat 31511710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33328764 - 33328651
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| | | |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  33328764 ttgactaaataccatagttcatattattttatgagttaattttaaaaaattaggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 33328665  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  33328664 ttaaagtgcgggta 33328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33331776 - 33331663
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| | | |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||||||||| |||| ||| ||||     
T  33331776 ttgactaaataccatagttcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatgttttttttgtttttccatag 33331677  T
Q  100 ttaaagtgcgggta 113  Q
    ||||||||||||||    
T  33331676 ttaaagtgcgggta 33331663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 24447062 - 24447172
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||| |||||||||||||||||||   |    
T  24447062 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatgttttttattgtcttttcatagaga 24447161  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  24447162 aagtgcgggta 24447172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7807931 - 7807848
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttt 83  Q
    |||||||||||| || |||| ||||||||||| |||||| ||||| |||||| || |||| |||||||||||||||||||||||    
T  7807931 ttgactaaatactacgattcgtattattttattagttaattttaaaagattttgatcataattttatttcaattgtgatgtttt 7807848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 1221651 - 1221761
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgat-gtttttattgtcttttcataatta 102  Q
    |||||||| ||||||| ||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||  |||||||||||||||||||   |    
T  1221651 ctaaatactacaattcgtattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatattttttattgtcttttcatagaga 1221750  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  1221751 aagtgcgggta 1221761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 20691538 - 20691636
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||| ||| | | |||  || | ||||||||||||| |||||||| ||||| |||| |||||||| ||||||||||||||    
T  20691538 attcatattattttatgagttaattttgaaaaattgggatcgtagttttatttcatttgtgatgtttttttttgttttttcatagttaaagtgcgggta 20691636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 33960143 - 33960253
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaa 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    | ||| ||||||| |||||||||| |||||| | ||||  |||||||  |||    
T  33960143 catagttttatttcaattgtgatgtttttcattgtcttttcata---gaggtgtgggtatgggcacttaggtgcccatagggtatg-ggaagaacattaa 33960238  T
Q  155 agttgttgcctacga 169  Q
    |||||||||| ||||    
T  33960239 agttgttgcccacga 33960253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13534121 - 13534205
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| ||  |||||||||||||||||||||| ||||| | |||  || | ||||||||||||| |||||||||||||    
T  13534121 ttgactaaataccacggttcatattattttatgagttaattttaaaaaattgggatcttagttttatttcatttgtgatgttttt 13534205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 31555937 - 31556007
Alignment:
Q  49 tttagaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggtatgtgcac 120  Q
    |||| ||||||| ||||||||||||||||| |||||||||| |||| ||  |||||||||||||||| ||||    
T  31555937 tttaaaccataggtttatttcaattgtgatatttttattgt-tttttatgtttaaagtgcgggtatgggcac 31556007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 6337353 - 6337296
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||||||||||||   ||||||||  ||||||| |||||    
T  6337353 catagttttatttcaattgtgatgtttttattcctttttcatagctaaagtgtgggta 6337296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1329494 - 1329538
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaa 44  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  1329494 ttgactaaataccacaattcatattattttatgagttaattttaa 1329538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 28770001 - 28769941
Alignment:
Q  53 gaccatagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||||| || ||||||||   ||||||||  |||||||||||||    
T  28770001 gaccatagttttatttcaattgtaatttttttattcctttttcatagctaaagtgcgggta 28769941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31070970 - 31070859
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttag-accatagttttatttcaattgtgatgtttttattgtcttttcata 98  Q
    |||||||||||| || ||||||||||||||  ||||||| ||||| | | |||| | | | ||||||||||| || |||||||||| |||| ||||||||    
T  31070970 ttgactaaataccacgattcatattatttt--gagttaattttaaaaaaattaggatcgtggttttatttcatttatgatgttttt-ttgttttttcata 31070874  T
Q  99 attaaagtgcgggta 113  Q
     ||||||||||||||    
T  31070873 gttaaagtgcgggta 31070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 6799420 - 6799488
Alignment:
Q  48 atttagaccatagttttatttcaattgtgatg-tttttattgtcttttcataattaaagtgcgggtatg 115  Q
    ||||||| |||||||||||||||| |||| || |||||||| ||||| |||   |||||||||||||||    
T  6799420 atttagatcatagttttatttcaagtgtggtgttttttattatctttccatggctaaagtgcgggtatg 6799488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5810 - 5923
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || |||| |||||||||||||||||| ||| | | |||  |||| ||||||||||||| |||||||||||||||||||||||||||     
T  5810 ttgactaaatactacgattcgtattattttatgagttaatttttaaaaattgggaccgtagttttatttcatttgtgatgtttttattgtcttttcatag 5909  T
Q  100 ttaaagtgcgggta 113  Q
    |||||||| |||||    
T  5910 ttaaagtgtgggta 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7051 - 7217
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||  || | ||||||||||||| ||||||||||||| ||   ||||||||     
T  7051 ttgactaaataccacgattcatattattttatgagttaatttaaaaaaattgggatcgtagttttatttcatttgtgatgtttttttt---ttttcatag 7147  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||| ||| |||||| |||||||||||||| || | ||||| ||||    |||||||||||||| ||||    
T  7148 ttaaaatgcaggtatgggcacttaggtacccttagggtatgaggaaggggactaaagttgttgcccacga 7217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 14932 - 15098
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgtttttattgtcttttcataa 99  Q
    |||||||||||| || ||||||||||||||||||||||| || || | |||  || | ||||||||||||| ||||||||||||| ||   ||||||||     
T  14932 ttgactaaataccacgattcatattattttatgagttaatttaaaaaaattgggatcgtagttttatttcatttgtgatgtttttttt---ttttcatag 15028  T
Q  100 ttaaagtgcgggtatgtgcacttaggtacccatatgatatgaagaagaactctaaagttgttgcctacga 169  Q
    ||||| ||| |||||| |||||||||||||| || | ||||| ||||    |||||||||||||| ||||    
T  15029 ttaaaatgcaggtatgggcacttaggtacccttagggtatgaggaaggggactaaagttgttgcccacga 15098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 13079 - 13157
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccata 133  Q
    |||| |||||||||||||||  |||||| ||||||||||||||  |||||||||||||||| ||||||| |||||||||    
T  13079 cataattttatttcaattgtagtgttttttattgtcttttcatggttaaagtgcgggtatgggcacttaagtacccata 13157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 21914 - 21992
Alignment:
Q  56 catagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggtatgtgcacttaggtacccata 133  Q
    |||| |||||||||||||||  |||||| ||||||||||||||  |||||||||||||||| ||||||| |||||||||    
T  21914 cataattttatttcaattgtagtgttttttattgtcttttcatggttaaagtgcgggtatgggcacttaagtacccata 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 26801 - 26691
Alignment:
Q  5 ctaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgat-gtttttattgtcttttcataatta 102  Q
    |||||||| ||||||||||||||||||| |||| | || ||||  ||| || |||||||||||||||||||||||  ||||||||||||| |||||   |    
T  26801 ctaaatactacaattcatattattttattagttgatttaaataattttggatcatagttttatttcaattgtgatattttttattgtcttgtcatagaga 26702  T
Q  103 aagtgcgggta 113  Q
    |||||||||||    
T  26701 aagtgcgggta 26691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0602 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 5116 - 5070
Alignment:
Q  61 ttttatttcaattgtgatgtttttattgtcttttcataattaaagtg 107  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  5116 ttttagttcaattgtgatatttttattgtcttttcataattaaagtg 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 72589 - 72645
Alignment:
Q  56 catagttttatttcaattgtgatgtttttattgtcttttcataattaaagtgcgggta 113  Q
    |||| |||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  72589 cataattttatttcaattgtgatgtttttattgtc-tttcatagttaaagcgcgggta 72645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 26079 - 26178
Alignment:
Q  16 attcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtga--tgtttttattgtcttttcataattaaagtgcgggta 113  Q
    ||||||||||||||||||||| | || ||    ||| || |||||||||||||||||||||   | ||||||||||||||||||| ||||| ||||||||    
T  26079 attcatattattttatgagttgatttgaaattttttggatcatagttttatttcaattgtggcttttttttattgtcttttcatagttaaaatgcgggta 26178  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 221949 - 222013
Alignment:
Q  50 ttagaccatagttttatttcaattgtgatgtttt-tattgtcttttcataattaaagtgcgggta 113  Q
    ||||| ||||||||||||||||| ||||| |||| ||||||| ||| ||||||||||||||||||    
T  221949 ttagatcatagttttatttcaatggtgatattttttattgtcgttttataattaaagtgcgggta 222013  T

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Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 240410 - 240494
Alignment:
Q  1 ttgactaaatac-acaattcatattattttatgagttaagtttaatagatttagaccatagttttatttcaattgtgatgttttt 84  Q
    |||||||||||| || ||||||||||||||||||||||| ||||| | |||  || | ||||||||||||| ||||||| |||||    
T  240410 ttgactaaataccacgattcatattattttatgagttaattttaaaaaattgggatcgtagttttatttcatttgtgatattttt 240494  T

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Target: scaffold0472 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 7974 - 7936
Alignment:
Q  71 attgtgatgtttttattgtcttttcataattaaagtgcg 109  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  7974 attgtcatgtttttgttgtcttttcataattaaagtgcg 7936  T

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Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 20147 - 20089
Alignment:
Q  56 catagttttatttcaattgtgatgttttt-attgtcttttcataattaaagtgcgggta 113  Q
    |||| ||||||||||||||||| |||||| |||||||||||||  ||||| ||||||||    
T  20147 cataattttatttcaattgtgacgtttttaattgtcttttcatggttaaaatgcgggta 20089  T

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