View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20384_high_33 (Length: 524)
Name: NF20384_high_33
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_high_33 |
 | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0006 (8 HSPs) |
| | |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0460 (2 HSPs) |
| | |
|
| [»] scaffold0068 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0012 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 7 - 509
Target Start/End: Complemental strand, 120987 - 120473
Alignment:
| Q |
7 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttgga |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
120987 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgtagagatattgtgctcaacatttttgga |
120888 |
T |
|
| Q |
107 |
actttcttggtgtttcaat------------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaacc |
194 |
Q |
| |
|
||||||||||||||||||| |||| |||||| ||||||||| | |||| || || | |||||||||||| |||||||||||||| ||| |
|
|
| T |
120887 |
actttcttggtgtttcaatggctctgccttaaataactctattcttggacatttaaacaaattaatttctttcaatgatttgcattgaagagaatggacc |
120788 |
T |
|
| Q |
195 |
ccaacaaagaatgccttaaatttggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttga |
294 |
Q |
| |
|
||||||||||||||||||| | ||||||| | | ||||| |||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
120787 |
ccaacaaagaatgccttaagtctggtcaaattataaagttcaatggaagttcaatgaggaaacacaaatttaactatctcatctgttccttcttcctttg |
120688 |
T |
|
| Q |
295 |
caacaatttcatcaatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgca |
394 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||| || |
|
|
| T |
120687 |
caacaatttcttcaatcccacagttacttacatgaagtctttgaagttgcatcatatctctagcaactgagagtggaaagaggcttatcaagctttcaca |
120588 |
T |
|
| Q |
395 |
ttccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaat |
494 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |
|
|
| T |
120587 |
ttccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggtagattgaatagttctaat |
120488 |
T |
|
| Q |
495 |
ttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
120487 |
ttcttcaattgagta |
120473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 314; Significance: 1e-177; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 7 - 509
Target Start/End: Complemental strand, 13596646 - 13596132
Alignment:
| Q |
7 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttgga |
106 |
Q |
| |
|
|||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || || |||||||||| |
|
|
| T |
13596646 |
tagacaagcttttgtaaaatatgacatttgacactactcttacctcttcaatcacaaaaagaggttgatacgttgagatattaagcacatcatttttgga |
13596547 |
T |
|
| Q |
107 |
actttcttggtgtttcaat------------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaacc |
194 |
Q |
| |
|
||||||||||||| |||| ||||||||||| |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13596546 |
actttcttggtgtctcaaaggctctgccttaaatagctctattgttggacatgcgaacaacttgatcgttttcaatgatttacattgaagagaatgaacc |
13596447 |
T |
|
| Q |
195 |
ccaacaaagaatgccttaaatttggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttga |
294 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13596446 |
ccaacaaagaatgccttaagtttggtcaagtacttaaggttaatggaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttga |
13596347 |
T |
|
| Q |
295 |
caacaatttcatcaatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgca |
394 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| ||||||||||||| || ||| | ||| |
|
|
| T |
13596346 |
caacaatttcatcaatcccacagttacttacttgaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttatcaagctatggca |
13596247 |
T |
|
| Q |
395 |
ttccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaat |
494 |
Q |
| |
|
| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
13596246 |
tcccacaacagatacatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagttttaat |
13596147 |
T |
|
| Q |
495 |
ttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
13596146 |
ttcttcaattgagta |
13596132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 40 - 509
Target Start/End: Complemental strand, 13677774 - 13677293
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
13677774 |
ctactcttacctcttcaaacacaaaaagaggttgataagttgagatattttgctcaacatttttggaactttcttggagtttcaatggctctgccttaaa |
13677675 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| | ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| | |
|
|
| T |
13677674 |
tagctctattcttggacatttaaacaacttgatggttttcaatgatttacattgaagagaatggaccccaacaaagaatgctttaagtttggtcaaatta |
13677575 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13677574 |
tcaagttcaatggaagtcaaatgaggaaacacaaatttaaccatctcatctggtccttcttccttgacaacaatttcttcaatcccacagttacttacaa |
13677475 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
13677474 |
gaagactttgaagttgcatcatatctctagccactgagagtggaaagaggcttatcaagcttttgcaatccgcaacagatacaacacttaaattttgaaa |
13677375 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13677374 |
cctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgagta |
13677293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 40 - 509
Target Start/End: Complemental strand, 13552878 - 13552397
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||| |||| || |
|
|
| T |
13552878 |
ctactcttacctcttcaaacacaaaaagaggttgataagttgagatattgtgctcaacatttctggaactctcttggtgtctcaaaggctctgccttaaa |
13552779 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| | |||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13552778 |
tagctctatttttggacatcgaaacaagttgatcgttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaagtttggtcaagtac |
13552679 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
| ||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||||| | ||||||||| | ||||| | |
|
|
| T |
13552678 |
ttaaggttaatggaagtcaaatgaggaaacacaaatttaaccatctcatatgtttcttcttccttggccacaatttcttgaatcccacactgacttactt |
13552579 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||| || ||| |||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
13552578 |
gaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttatcaagctattgcatcccacaacagatacatcacttaaattttcaaa |
13552479 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
13552478 |
cttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgagta |
13552397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 30 - 506
Target Start/End: Complemental strand, 20378076 - 20377588
Alignment:
| Q |
30 |
atatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat---- |
125 |
Q |
| |
|
|||||| || |||| ||||||||||||||| ||||||||| ||||||||||||||||||| || || ||||| ||||||||||||||||| |||| |
|
|
| T |
20378076 |
atatttaacgctacacttacctcttcaatctcaaaaagaggttgatatgttgagatattgagcacatcatttctggaactttcttggtgtctcaaagtct |
20377977 |
T |
|
| Q |
126 |
--------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaattt |
217 |
Q |
| |
|
||||||||||| ||||||||| || |||| | || ||||||||||||| |||||||||||||| |||||||||||||||||||| | ||| |
|
|
| T |
20377976 |
ctgccttaaatagctctatttttggacatccaaacaaatgaattgttttcaatgatttgcattgaagagaatggaccccaacaaagaatgccttcagttt |
20377877 |
T |
|
| Q |
218 |
ggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacag |
317 |
Q |
| |
|
|||||| || | |||||||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||| || |||| ||||| | ||||||||| |
|
|
| T |
20377876 |
ggtcaaataatgaagtttaatgaatgtcaaatgaggaaacacaaatttaaccatctcatctggtccatcttccctggcaacgatttcttgaatcccacat |
20377777 |
T |
|
| Q |
318 |
ttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcactta |
417 |
Q |
| |
|
||| ||| | ||||| |||||||||| ||| ||||||||||||||| |||||||||||||||| || ||| |||||| ||||||| ||||||||||||| |
|
|
| T |
20377776 |
ttaattacttgaagattttgaagttgcatcacatctctagctactgaaagtggaaagaggcttatcaagctattgcatcccacaacggatacatcactta |
20377677 |
T |
|
| Q |
418 |
aattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
20377676 |
aattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttcagttga |
20377588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 29 - 513
Target Start/End: Original strand, 15895733 - 15896229
Alignment:
| Q |
29 |
tatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat--- |
125 |
Q |
| |
|
|||||||||| |||| ||||| ||||| ||||||||||||| |||||||||||||||||| |||||| ||||| || |||||||||||||| |||| |
|
|
| T |
15895733 |
tatatttgacgctacccttacttcttcgatcacaaaaagaggttgatatgttgagatattttgctcatcatttctgaaactttcttggtgtctcaaagtt |
15895832 |
T |
|
| Q |
126 |
---------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatt |
216 |
Q |
| |
|
||||||||||| || |||||| || |||| | || |||||||||||||||||||||| ||||| ||||| |||||||||||||| | || |
|
|
| T |
15895833 |
tctgccttaaatagctctattttcggacatccagacaagatgattgttttcaatgatttacattgaagggaatggaccccgacaaagaatgccttcagtt |
15895932 |
T |
|
| Q |
217 |
tggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccaca |
316 |
Q |
| |
|
|||||| | |||||| ||||| | || ||||||||||||| ||||| ||| |||||||| ||||||| |||| | |||||||||| | |||| |||| |
|
|
| T |
15895933 |
gggtcaaacaatcaagtgtaatggatgttaaatgaggaaacataaattgaactatctcatcaattccttcctcctcggcaacaatttcttgaatctcaca |
15896032 |
T |
|
| Q |
317 |
gttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcactt |
416 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||||| || ||||| ||||||||||||||||||| ||| |
|
|
| T |
15896033 |
cttacttactcgaagactttgaagttgcatcatatctctacccactgagagtggaaagaggcttatcaagctttcacattccacaacagatacatagctt |
15896132 |
T |
|
| Q |
417 |
aaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagtataat |
513 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||| |||||||||||||||| |||||| |
|
|
| T |
15896133 |
aaattttgaaacctcatagtgtaatgtgggtcctccttccatacatgtttcagttttggaagattagatagttttaatttcttcaattgactataat |
15896229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 51 - 501
Target Start/End: Original strand, 20510532 - 20510994
Alignment:
| Q |
51 |
tcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagctctatat |
138 |
Q |
| |
|
|||||| |||||||||| | || |||||| ||||||||| || || ||||| ||||||||||||||||| |||| ||||||| ||| | |
|
|
| T |
20510532 |
tcttcattcacaaaaagcggttcatatgtcgagatattgagcacatcatttctggaactttcttggtgtctcaaagtctctaccttaaatagctttattt |
20510631 |
T |
|
| Q |
139 |
ttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagtttaat |
238 |
Q |
| |
|
|||||||| || |||| || || ||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||| | | ||||||||| |
|
|
| T |
20510632 |
ttggacatccaaacaaattgattgttttcaatgatttgcattgaagagaatggaccccaacaaagaatgccttcagtttggtcaaattatgaagtttaat |
20510731 |
T |
|
| Q |
239 |
gtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttga |
338 |
Q |
| |
|
| | |||||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||| | ||||||||| ||| ||| | ||||||||||| |
|
|
| T |
20510732 |
gaatgtcaaatgaggaaacacaaaattaaccatctcatctggtccatcttccttggcaacaatttcttgaatcccacatttaattacttgaagactttga |
20510831 |
T |
|
| Q |
339 |
agttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtgt |
438 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||||| || ||| |||||| ||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
20510832 |
agttgcatcatatctctagctactgaaagtggaaagaggcttatcaagctattgcataccacaacgtatacatcacttaaattttgaaaccccatagtgt |
20510931 |
T |
|
| Q |
439 |
aatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttca |
501 |
Q |
| |
|
|||||||||||| |||||||||| | |||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
20510932 |
tatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttca |
20510994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 138 - 507
Target Start/End: Complemental strand, 13517292 - 13516923
Alignment:
| Q |
138 |
tttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagtttaa |
237 |
Q |
| |
|
||||||||| || |||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||| | ||||||| ||| |
|
|
| T |
13517292 |
tttggacatccaaacaaatcgatctttttcaatgatttacattgaagagaatggaccccaacaaagaatgccttaagttttggcaaatgttcaagtataa |
13517193 |
T |
|
| Q |
238 |
tgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttg |
337 |
Q |
| |
|
|| | || || || ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||| | || ||||| ||||||| |||||||||||| |
|
|
| T |
13517192 |
tggatgttaattgtggaaacacaaatttaactatctcttctgttccatcttccttggcaacaatttcttggatgccacatttacttactcgaagactttg |
13517093 |
T |
|
| Q |
338 |
aagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtg |
437 |
Q |
| |
|
|||||| |||| || || | |||||||||||||||||| ||| || | |||||||| |||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13517092 |
aagttgcaacatacctttaaccactgagagtggaaagaggtttatcaagtttttgcatcccaccacagatacatcacttaaattttgaaaccgcatagtg |
13516993 |
T |
|
| Q |
438 |
taatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgag |
507 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
13516992 |
taatgtggatcctctttccatacatgcttcagttttggaagattagatagttttaatttcttcagttgag |
13516923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 45 - 476
Target Start/End: Original strand, 19189190 - 19189633
Alignment:
| Q |
45 |
cttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagct |
132 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||| || || ||||| |||||||||| |||||| |||| ||||||| |
|
|
| T |
19189190 |
cttacctcttcaatcacaaaaagaggttgatacgttgagatattgagcacatcatttctggaactttcatggtgtctcaaagcctctgacttaaatagct |
19189289 |
T |
|
| Q |
133 |
ctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaag |
232 |
Q |
| |
|
|||| ||||||||||| |||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||| | |||||| |
|
|
| T |
19189290 |
ctatttttggacattcgaacaaatcgatcgttttcaatgatttacattgaagagaatggaccccaacaaagaatgccttaagttttggcaaatgttcaag |
19189389 |
T |
|
| Q |
233 |
tttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaaga |
332 |
Q |
| |
|
| ||||| | || || || ||||||| ||||||||||||||||||| ||||||||||||| |||||||||| | || ||||| ||||||| ||||||| |
|
|
| T |
19189390 |
tataatggatgttaactgtggaaacaataatttaaccatctcatctggtccttcttccttggcaacaatttcttggatgccacatttacttactcgaaga |
19189489 |
T |
|
| Q |
333 |
ctttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctca |
432 |
Q |
| |
|
||||||||||| |||| || |||| |||||||||||||||||| ||| || | ||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19189490 |
ctttgaagttgcaacatacctttagccactgagagtggaaagaggtttatcaagttttcacattcctcaacagatacatcacttaaattttgaaacctca |
19189589 |
T |
|
| Q |
433 |
tagtgtaatgtggatcctctttccatacatacttcagttttgga |
476 |
Q |
| |
|
|||||| |||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
19189590 |
tagtgttatgtggatcctccttccatacatgcctcagttttgga |
19189633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 46 - 506
Target Start/End: Original strand, 16453771 - 16454240
Alignment:
| Q |
46 |
ttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat---------aatagctctat |
136 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||| || || || || ||||||||||||||||| | | ||||||||||| |
|
|
| T |
16453771 |
ttacctcttcaatcacaaaaagaggttgatacgttgagatattgagcacatcacttctggaactttcttggtgtcttagctctgtcttaaatagctctat |
16453870 |
T |
|
| Q |
137 |
atttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagttta |
236 |
Q |
| |
|
||||||||| || |||| | || ||||||| |||||||||||||| |||||||| ||||||||||||||||| | || | || ||||||| || |
|
|
| T |
16453871 |
ttttggacatccaaacaagtaaattgttttcaacgatttacattgaagtgaatgaacaccaacaaagaatgccttcagcttaggtaaaagttcaagtcta |
16453970 |
T |
|
| Q |
237 |
atgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagacttt |
336 |
Q |
| |
|
||| | || ||||||| ||||||||| || || ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
16453971 |
atgaatgttaaatgagaaaacacaaagtttactatctcatttgttccttcttccttggcaacaatttcttcaatcccacagttacttactcgaagacttt |
16454070 |
T |
|
| Q |
337 |
gaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagt |
436 |
Q |
| |
|
||||||| |||||||||||||||||| ||| ||||||| || | || ||| |||||||| |||| || || |||||||||||||||||||||||||| |
|
|
| T |
16454071 |
gaagttgcatcatatctctagctactgtgagcggaaagatactaatcaaacttgtgcattcctcaactgacacttcacttaaattttgaaacctcatagt |
16454170 |
T |
|
| Q |
437 |
gtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
|| |||||||||||| |||||||||| |||||||||||||| ||| ||||||| || ||||||||||||| |
|
|
| T |
16454171 |
gtcatgtggatcctccttccatacatgcttcagttttggaacattagatagttttagtttcttcaattga |
16454240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 46 - 506
Target Start/End: Original strand, 16462928 - 16463397
Alignment:
| Q |
46 |
ttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat---------aatagctctat |
136 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||| || || || || ||||||||||||||||| | | ||||||||||| |
|
|
| T |
16462928 |
ttacctcttcaatcacaaaaagaggttgatacgttgagatattgagcacatcacttctggaactttcttggtgtcttagctctgtcttaaatagctctat |
16463027 |
T |
|
| Q |
137 |
atttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagttta |
236 |
Q |
| |
|
||||||||| || |||| | || ||||||| |||||||||||||| |||||||| ||||||||||||||||| | || | || ||||||| || |
|
|
| T |
16463028 |
ttttggacatccaaacaagtaaattgttttcaacgatttacattgaagtgaatgaacaccaacaaagaatgccttcagcttaggtaaaagttcaagtcta |
16463127 |
T |
|
| Q |
237 |
atgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagacttt |
336 |
Q |
| |
|
||| | || ||||||| ||||||||| || || ||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
16463128 |
atgaatgttaaatgagaaaacacaaagtttactatctcatttgttccttcttccttggcaacaatttcttcaatcccacagttacttactcgaagacttt |
16463227 |
T |
|
| Q |
337 |
gaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagt |
436 |
Q |
| |
|
||||||| |||||||||||||||||| ||| ||||||| || | || ||| |||||||| |||| || || |||||||||||||||||||||||||| |
|
|
| T |
16463228 |
gaagttgcatcatatctctagctactgtgagcggaaagatactaatcaaacttgtgcattcctcaactgacacttcacttaaattttgaaacctcatagt |
16463327 |
T |
|
| Q |
437 |
gtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
|| |||||||||||| |||||||||| |||||||||||||| ||| ||||||| || ||||||||||||| |
|
|
| T |
16463328 |
gtcatgtggatcctccttccatacatgcttcagttttggaacattagatagttttagtttcttcaattga |
16463397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 40 - 506
Target Start/End: Complemental strand, 20486583 - 20486105
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||| ||||| |||| | |||| || | |||| || |
|
|
| T |
20486583 |
ctactcttacctcttcaagcacaaaaagaggttgagatgttgagatattgagctcatcatttacggaattctctttgtatctcaaaggctctgccttaaa |
20486484 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| |||| || | ||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || || ||| | | |
|
|
| T |
20486483 |
tagctctatttttggacatccatagaagtggatcgttttcaatgatttacagtgaagagaatgaaccccaacatagaatgcctcaagttcttgcaaattt |
20486384 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
| |||| ||||| | || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||| ||||| | ||||| | |
|
|
| T |
20486383 |
tgaagtgtaatggatgttaaatgctgaaacacaaatttaaccatctcatttgttccttcttccttgccaacaatttcttgaataccacactgacttactt |
20486284 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| |||||||||||| || ||||| |||||| ||||||||| |||| ||||||||| ||| |
|
|
| T |
20486283 |
taagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttgtcaagctttcacattcctcaacagatatatcaattaaattttcaaa |
20486184 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
||| ||||||||||||||||| || |||||||||| |||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
20486183 |
cctaatagtgtaatgtggatcatccttccatacatgcttcagatttggaagattagatagttttaatttcttcaattga |
20486105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 163 - 506
Target Start/End: Original strand, 16491985 - 16492328
Alignment:
| Q |
163 |
ttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaa |
262 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || ||||||||||||||||||| ||||| || | ||||||| ||||| | || ||||||| ||||||||| |
|
|
| T |
16491985 |
ttttcagtgacttacattgaagagaatgtacaccaacaaagaatgccttaagtttgggtaaatgttcaagtctaatggatgttaaatgagaaaacacaaa |
16492084 |
T |
|
| Q |
263 |
tttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttgaagttgtttcatatctctagctact |
362 |
Q |
| |
|
| || |||||||||||||||||||| ||| | |||||||| ||||| ||| | | ||||| | ||||| ||||||| || ||||||||| |||||| |
|
|
| T |
16492085 |
ctgtactatctcatctgttccttcttcattggcgacaatttcttcaattccagaatcacttactagaagatcttgaagtagtatcatatctcgtgctact |
16492184 |
T |
|
| Q |
363 |
gagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacat |
462 |
Q |
| |
|
||| | |||||| ||||| || |||| || ||||| |||| ||||| ||| ||||||||||||||||||| ||| |||||||| || |||||||||| |
|
|
| T |
16492185 |
gagtgcggaaagttgcttatcaagcttctgtattcctcaaccgatacttcatttaaattttgaaacctcattgtgctatgtggattttccttccatacat |
16492284 |
T |
|
| Q |
463 |
acttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
16492285 |
gcttcagttttggaagattagatagttttaatttcttcaattga |
16492328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 13653077 - 13653016
Alignment:
| Q |
448 |
cctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| || || |||||||||||||||| |
|
|
| T |
13653077 |
cctctttccatacatgcttcagttttggaagattagatatttttagtttcttcaattgagta |
13653016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 16491872 - 16491956
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaa |
124 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||| ||||| |||||| ||||| |||| | |||||||||| ||| |||| |
|
|
| T |
16491872 |
ctacccttacctcgtcaatcacaaaaagaggttgatacgttgaaatattgagctcattatttcggaaactttcttgttgtctcaa |
16491956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 13517397 - 13517318
Alignment:
| Q |
45 |
cttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaa |
124 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | ||||||| ||||| || || | || |||||||||||| |||| |
|
|
| T |
13517397 |
cttacctcttcaatcacaaaaagaggttgatattcagggatattgagctcatcaattcttgagctttcttggtgtctcaa |
13517318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 301; Significance: 1e-169; HSPs: 8)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 40 - 509
Target Start/End: Complemental strand, 175356 - 174875
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
175356 |
ctactcttacctcttcaaacacaaaaagaggttgataagttgagatattttgctcaacatttttggaactttcttggagtttcaatggctctgccttaaa |
175257 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| | ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| | |
|
|
| T |
175256 |
tagctctattcttggacatttaaacaacttgatggttttcaatgatttacattgaagagaatggaccccaacaaagaatgctttaagtttggtcaaatta |
175157 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
175156 |
tcaagttcaatggaagtcaaatgaggaaacacaaatttaaccatctcatctggtccttcttccttgacaacaatttcttcaatcccacagttacttacaa |
175057 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
175056 |
gaagactttgaagttgcatcatatctctagccactgagagtggaaagaggcttatcaagcttttgcaatccgcaacagatacaacacttaaattttgaaa |
174957 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
174956 |
cctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgagta |
174875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 40 - 509
Target Start/End: Complemental strand, 190764 - 190283
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
190764 |
ctactcttacctcttcaaacacaaaaagaggttgataagttgagatattttgctcaacatttttggaactttcttggagtttcaatggctctgccttaaa |
190665 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| | ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| | |
|
|
| T |
190664 |
tagctctattcttggacatttaaacaacttgatggttttcaatgatttacattgaagagaatggaccccaacaaagaatgctttaagtttggtcaaatta |
190565 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
190564 |
tcaagttcaatggaagtcaaatgaggaaacacaaatttaaccatctcatctggtccttcttccttgacaacaatttcttcaatcccacagttacttacaa |
190465 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
190464 |
gaagactttgaagttgcatcatatctctagccactgagagtggaaagaggcttatcaagcttttgcaatccgcaacagatacaacacttaaattttgaaa |
190365 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
190364 |
cctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgagta |
190283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 51 - 499
Target Start/End: Complemental strand, 114172 - 113712
Alignment:
| Q |
51 |
tcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagctctatat |
138 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||| || || ||||| ||||||||||||||||| |||| ||||||||||| | |
|
|
| T |
114172 |
tcttcattcacaaaaagaggttgatatgttgagatattgagcacatcatttctggaactttcttggtgtctcaaagtctctgccttaaatagctctattt |
114073 |
T |
|
| Q |
139 |
ttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagtttaat |
238 |
Q |
| |
|
|||||||| || |||| || || ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||| | | ||||||||| |
|
|
| T |
114072 |
ttggacatccaaacaaattaattgttttcaatgatttgcattgaagagaatggaccccaacaaagaatgccttaagtttggtcaaattattaagtttaat |
113973 |
T |
|
| Q |
239 |
gtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttga |
338 |
Q |
| |
|
| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||| | ||||||||||| |
|
|
| T |
113972 |
gaatgtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttggcaacaatttcttgaatcccacatttaattacttgaagactttga |
113873 |
T |
|
| Q |
339 |
agttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtgt |
438 |
Q |
| |
|
||||| ||| ||||||||||||||| |||||||||||||||| || ||| |||||| ||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
113872 |
agttgcatcaaatctctagctactgaaagtggaaagaggcttatcaagctattgcatcccacaacggatacatcacttaaattttgaaacctcatagtgt |
113773 |
T |
|
| Q |
439 |
aatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttctt |
499 |
Q |
| |
|
|||||||||||| |||||||||| | |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
113772 |
tatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttctt |
113712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 285 - 509
Target Start/End: Complemental strand, 210831 - 210607
Alignment:
| Q |
285 |
tcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaaca |
384 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||| || |
|
|
| T |
210831 |
tcttcctttgcaacaatttcttcaatcccacagttacttacatgaagactttgaagttgcatcatatctctagccactgagaatggaaagaggcttatca |
210732 |
T |
|
| Q |
385 |
ggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattgga |
484 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
210731 |
agctattgcatcccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattgaa |
210632 |
T |
|
| Q |
485 |
tagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
210631 |
tagttctaatttcttcaattgagta |
210607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 7 - 276
Target Start/End: Complemental strand, 3931 - 3650
Alignment:
| Q |
7 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttgga |
106 |
Q |
| |
|
|||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || || |||||||||| |
|
|
| T |
3931 |
tagacaagcttttgtaaaatatgacatttgacactactcttacctcttcaatcacaaaaagaggttgatacgttgagatattaagcacatcatttttgga |
3832 |
T |
|
| Q |
107 |
actttcttggtgtttcaat------------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaacc |
194 |
Q |
| |
|
||||||||||||| |||| ||||||||||| |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3831 |
actttcttggtgtctcaaaggctctgccttaaatagctctattgttggacatgcgaacaacttgatcgttttcaatgatttacattgaagagaatgaacc |
3732 |
T |
|
| Q |
195 |
ccaacaaagaatgccttaaatttggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcat |
276 |
Q |
| |
|
||||||||||||||||||| |||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
3731 |
ccaacaaagaatgccttaagtttggtcaagtacttaaggttaatggaagtcaaatgaggaaacacaaatttaaccatctcat |
3650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 210953 - 210835
Alignment:
| Q |
7 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttgga |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
210953 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttgga |
210854 |
T |
|
| Q |
107 |
actttcttggtgtttcaat |
125 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
210853 |
actttcttggtgtttcaat |
210835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 396 - 509
Target Start/End: Complemental strand, 118590 - 118477
Alignment:
| Q |
396 |
tccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatt |
495 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| |
|
|
| T |
118590 |
tccacaacagatacatcacttaaattttcaaacctcatagtgtaatgtggatcctctttccatacatgtttcagttttggaagattgaatagttttaatt |
118491 |
T |
|
| Q |
496 |
tcttcaattgagta |
509 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
118490 |
ttttcaattgagta |
118477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 509
Target Start/End: Complemental strand, 142838 - 142777
Alignment:
| Q |
448 |
cctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| || || |||||||||||||||| |
|
|
| T |
142838 |
cctctttccatacatgcttcagttttggaagattagatatttttagtttcttcaattgagta |
142777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 7 - 509
Target Start/End: Complemental strand, 21817301 - 21816787
Alignment:
| Q |
7 |
tagacaagcttttgaaaaatattatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttgga |
106 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||| |
|
|
| T |
21817301 |
tagacaagcttttgaaaaatatgatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgagcacatcatttctgga |
21817202 |
T |
|
| Q |
107 |
actttcttggtgtttcaat------------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaacc |
194 |
Q |
| |
|
|||||||| |||| |||| |||||| |||| ||||||||| | |||| || || |||||||||||||||||||||||||||||||| |
|
|
| T |
21817201 |
actttctttgtgtctcaaagactctgccttaaatagcactatttttggacatcgaaacaagttgattgttttcaatgatttacattgaagagaatgaacc |
21817102 |
T |
|
| Q |
195 |
ccaacaaagaatgccttaaatttggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttga |
294 |
Q |
| |
|
||||||||||||||||||| ||||||||| | | |||||||||| | || |||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21817101 |
ccaacaaagaatgccttaagtttggtcaaatcataaagtttaatggatgttaaatgaagaaacacaaatttaaccatctcatctggtccttcttccttgg |
21817002 |
T |
|
| Q |
295 |
caacaatttcatcaatcccacagttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgca |
394 |
Q |
| |
|
| |||||||| ||||||||||| ||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||| | || ||||||||| |
|
|
| T |
21817001 |
ccacaatttcttcaatcccacatttacttacttgaagactttgaagttgcttcatatctctagcaactgagagtggaaagaggctcatcaagcttttgca |
21816902 |
T |
|
| Q |
395 |
ttccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaat |
494 |
Q |
| |
|
| |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
21816901 |
tcccacaacagaaacatcacttaaattttcaaacctcagtgtgtaatgtggatcctctttccatacatgcttcagttttggaagattagatagttttaat |
21816802 |
T |
|
| Q |
495 |
ttcttcaattgagta |
509 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
21816801 |
ttctttaattgagta |
21816787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 45 - 509
Target Start/End: Original strand, 22273407 - 22273883
Alignment:
| Q |
45 |
cttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagct |
132 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| |||||| ||||| ||||| | ||||||| ||||||||| || |||| |
|
|
| T |
22273407 |
cttacctcttcaatcacaaaaagaggttgatattttgaaatattgagctcatcatttctaatgctttcttcgtgtttcaaaggttctgccttaaaaagct |
22273506 |
T |
|
| Q |
133 |
ctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaag |
232 |
Q |
| |
|
|||||||||||||| || | | | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || | ||| |
|
|
| T |
22273507 |
ctatatttggacatgcaaagagatcgatcgttttcaatgatttacattgaagagaatggaccccaacaaagaatgccttaagtttggtcaaataattaag |
22273606 |
T |
|
| Q |
233 |
tttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaaga |
332 |
Q |
| |
|
| | ||| | || ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| | || || || ||||||| ||||||| |
|
|
| T |
22273607 |
tgtgatggatgttaaatgaggaaacacaaatttaactatctcatctgttccatcttccttggcaacaatttcttggatgccgcatttacttactcgaaga |
22273706 |
T |
|
| Q |
333 |
ctttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctca |
432 |
Q |
| |
|
||||||| || ||||||| ||||| |||||||||||||||||||||| || |||| ||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22273707 |
ctttgaattttcatcatatcactagccactgagagtggaaagaggcttatcaagcttctgcatcccacaacagatacatcatttaaattttgaaacctca |
22273806 |
T |
|
| Q |
433 |
tagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||| | |||||||||| |
|
|
| T |
22273807 |
cagtgttatgtggatcctccttccatacatgcttcagttttggaagattagatagttttaatttttgcaattgagta |
22273883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 48 - 506
Target Start/End: Complemental strand, 42684 - 42214
Alignment:
| Q |
48 |
acctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagctcta |
135 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
42684 |
acctcttcaatcacaaaaagaggttgatatgttgagatattaagcacatcatttttggaactttcttggtgtctcaaaggctctgccttaaatagctcta |
42585 |
T |
|
| Q |
136 |
tatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagttt |
235 |
Q |
| |
|
| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| || |
|
|
| T |
42584 |
ttgttggacatgtgaacaacttgatcgttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaagtttggtcaagtactcaaggtt |
42485 |
T |
|
| Q |
236 |
aatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactt |
335 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| | ||||||||| | ||||| | |||||||| |
|
|
| T |
42484 |
aatggaagtcaaatgaggaaacacaaatttaaccatctcatatgttccttcttccttggccacaatttcttgaatcccacactgacttacttgaagactt |
42385 |
T |
|
| Q |
336 |
tgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatag |
435 |
Q |
| |
|
|||||||| ||||||| ||||| ||||||| ||||||||||||| || ||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42384 |
tgaagttgcatcatatcgctagccactgagaacggaaagaggcttatcaagctattgcatcccacaacagatacatcacttaaattttgaaacctcatag |
42285 |
T |
|
| Q |
436 |
tgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
||| |||||||||||| |||||||||| | ||||||||| |||||| ||||||| ||||||||||| |||| |
|
|
| T |
42284 |
tgttatgtggatcctccttccatacatgcctcagttttgaaagattagatagttttaatttcttcagttga |
42214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 30 - 506
Target Start/End: Complemental strand, 48378 - 47890
Alignment:
| Q |
30 |
atatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat---- |
125 |
Q |
| |
|
|||||| || |||| ||||||||||||||| ||||||||| ||||||||||||||||||| || || ||||| ||||||||||||||||| |||| |
|
|
| T |
48378 |
atatttaacgctacacttacctcttcaatctcaaaaagaggttgatatgttgagatattgagcacatcatttctggaactttcttggtgtctcaaagtct |
48279 |
T |
|
| Q |
126 |
--------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaattt |
217 |
Q |
| |
|
||||||||||| ||||||||| || |||| | || ||||||||||||| |||||||||||||| |||||||||||||||||||| | ||| |
|
|
| T |
48278 |
ctgccttaaatagctctatttttggacatccaaacaaatgaattgttttcaatgatttgcattgaagagaatggaccccaacaaagaatgcctttagttt |
48179 |
T |
|
| Q |
218 |
ggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacag |
317 |
Q |
| |
|
|||||| | | |||||||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||| || |||| ||||| | ||||||||| |
|
|
| T |
48178 |
ggtcaaattattaagtttaatgaatgtcaaatgaggaaacacaaatttaaccatctcatctggtccatcttccctggcaacgatttcttgaatcccacat |
48079 |
T |
|
| Q |
318 |
ttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcactta |
417 |
Q |
| |
|
||| ||| | ||||| |||||||||| ||| ||||||||||||||| |||||||||||||||| || ||| |||||| ||||||| ||||||||||||| |
|
|
| T |
48078 |
ttaattacttgaagattttgaagttgcatcacatctctagctactgaaagtggaaagaggcttatcaagctattgcatcccacaacggatacatcactta |
47979 |
T |
|
| Q |
418 |
aattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
47978 |
aattttgaaacctcatagtgttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttcagttga |
47890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 163 - 509
Target Start/End: Original strand, 20805914 - 20806260
Alignment:
| Q |
163 |
ttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaa |
262 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||||||| |
|
|
| T |
20805914 |
ttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaagtttggtcaagtactcaaggttaatggaagtcaaatgaggaaacacaaa |
20806013 |
T |
|
| Q |
263 |
tttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttgaagttgtttcatatctctagctact |
362 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | || ||||| | ||||||||| ||||||| | |||||||||||||||| ||||||||||||| ||| |
|
|
| T |
20806014 |
tttaaccatctcatatgttccttcttccttggccacgatttcttgaatcccacacttacttacttgaagactttgaagttgcatcatatctctagccact |
20806113 |
T |
|
| Q |
363 |
gagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacat |
462 |
Q |
| |
|
||||| ||||||||||||| || ||| |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
20806114 |
gagagcggaaagaggcttatcaagctattgcatcccacaacagatacatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacat |
20806213 |
T |
|
| Q |
463 |
acttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
20806214 |
gcttcagttttggaagattagatagttttaatttcttcaattgagta |
20806260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 126 - 509
Target Start/End: Original strand, 20769000 - 20769383
Alignment:
| Q |
126 |
aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagt |
225 |
Q |
| |
|
||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
20769000 |
aatagctctatttttggacatcgaaacaacttgattgttttcaatgatttacattgaagagaatgacccccatcaaagaatgccttaagtttggtcaagc |
20769099 |
T |
|
| Q |
226 |
attcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttat |
325 |
Q |
| |
|
| | |||| ||||| | || || || ||||||||||||||||| ||||||| |||||||||||||||| |||||||||| | ||||||||| ||||| | |
|
|
| T |
20769100 |
aatgaagtgtaatggatgttaactgcggaaacacaaatttaactatctcatttgttccttcttccttgccaacaatttcttgaatcccacatttactaac |
20769199 |
T |
|
| Q |
326 |
tcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttga |
425 |
Q |
| |
|
||||||||||||||| || |||||||||||||| || ||||||||||||||||||| || ||||| ||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
20769200 |
tcgaagactttgaagctgcttcatatctctagccacagagagtggaaagaggcttatcaagctttcgcaatccccaacagacacatcacttaaattttga |
20769299 |
T |
|
| Q |
426 |
aacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
20769300 |
aacctcatagtgtaatgtggatccaccttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgagta |
20769383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 126 - 509
Target Start/End: Original strand, 20778794 - 20779177
Alignment:
| Q |
126 |
aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagt |
225 |
Q |
| |
|
||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |
|
|
| T |
20778794 |
aatagctctatttttggacatcgaaacaacttgattgttttcaatgatttacattgaagagaatgacccccatcaaagaatgccttaagtttggtcaagc |
20778893 |
T |
|
| Q |
226 |
attcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttat |
325 |
Q |
| |
|
| | |||| ||||| | || || || ||||||||||||||||| ||||||| |||||||||||||||| |||||||||| | ||||||||| ||||| | |
|
|
| T |
20778894 |
aatgaagtgtaatggatgttaactgcggaaacacaaatttaactatctcatttgttccttcttccttgccaacaatttcttgaatcccacatttactaac |
20778993 |
T |
|
| Q |
326 |
tcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttga |
425 |
Q |
| |
|
||||||||||||||| || |||||||||||||| || ||||||||||||||||||| || ||||| ||| ||| ||||||| |||||||||||||||||| |
|
|
| T |
20778994 |
tcgaagactttgaagctgcttcatatctctagccacagagagtggaaagaggcttatcaagctttcgcaatccccaacagacacatcacttaaattttga |
20779093 |
T |
|
| Q |
426 |
aacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
20779094 |
aacctcatagtgtaatgtggatccaccttccatacatgcttcagttttggaagattagatagttttaatttcttcaattgagta |
20779177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 51 - 506
Target Start/End: Original strand, 20834702 - 20835169
Alignment:
| Q |
51 |
tcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagctctatat |
138 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||| || || ||||| ||||||||||||||||| |||| ||||||||||| | |
|
|
| T |
20834702 |
tcttcattcacaaaaagaggttgatatgttgagatattgagcacatcatttctggaactttcttggtgtctcaaagtctctgccttaaatagctctattt |
20834801 |
T |
|
| Q |
139 |
ttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaa-gtattcaagtttaa |
237 |
Q |
| |
|
|||||||| || |||| || || ||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||||| |||| |||||||| |
|
|
| T |
20834802 |
ttggacatccaaacaaattaattgttttcaatgatttgcatcgaagagaatggaccccaacaaagaatgccttaagtttggtcaaagtatg-aagtttaa |
20834900 |
T |
|
| Q |
238 |
tgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagactttg |
337 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||| | ||| | |||| || |||||||||| | ||||||||| ||| ||| | |||||||||| |
|
|
| T |
20834901 |
tgaatgtcaaatgaggaaacacaaatttaaccatctcatccggtccatattccctggcaacaatttcttgaatcccacatttaattactagaagactttg |
20835000 |
T |
|
| Q |
338 |
aagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcatagtg |
437 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||| ||||| || ||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20835001 |
aagttgcatcatatctctagctactgaaagtggaaagaagcttatcaagctattgcatcccacaacggatacatcacttaaattttgaaacctcatagtg |
20835100 |
T |
|
| Q |
438 |
taatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
| |||||||||||| |||||||||| | |||||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
20835101 |
ttatgtggatcctccttccatacatgcctcagttttggaagattagatagttttaatttcttcagttga |
20835169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 40 - 507
Target Start/End: Original strand, 20771851 - 20772330
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||| |||||||||||| |||| || |
|
|
| T |
20771851 |
ctacccttacctcttcaatcacaaaaagaggttgatattttgagatattcagctcatcatttttggagctttcttggtgtctcaaaggttcttccttaaa |
20771950 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| | ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||| | | |
|
|
| T |
20771951 |
tagctctatttttggacatcgaaacaacttgattgttttcaatgatttacattgaagagaatggaccccaacaaagaatgccttaagttttggcaaatgt |
20772050 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
| |||| ||||| | || || || ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||| | || |||| ||||||| || |
|
|
| T |
20772051 |
ttaagtataatggatgttaactgtggaaacacaaatttaactatctcttctgttccatcttccttggcaacaatttcttggatgccacttttacttactc |
20772150 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| |||| || |||| |||||||||||||||| | ||| || | |||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
20772151 |
gaagactttgaagttgcaacatacctttagccactgagagtggaaagatgtttatcaagtttttgcatcccaccacagatacatcacttaaattttgaaa |
20772250 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgag |
507 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||||| ||||| |
|
|
| T |
20772251 |
ccgcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattagataattttaatttcttcagttgag |
20772330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 40 - 507
Target Start/End: Original strand, 20781645 - 20782124
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||| |||||||||||| |||| || |
|
|
| T |
20781645 |
ctacccttacctcttcaatcacaaaaagaggttgatattttgagatattcagctcatcatttttggagctttcttggtgtctcaaaggttcttccttaaa |
20781744 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| | ||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||| | | |
|
|
| T |
20781745 |
tagctctatttttggacatcgaaacaacttgattgttttcaatgatttacattgaagagaatggaccccaacaaagaatgccttaagttttggcaaatgt |
20781844 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
| |||| ||||| | || || || ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||| | || |||| ||||||| || |
|
|
| T |
20781845 |
ttaagtataatggatgttaactgtggaaacacaaatttaactatctcttctgttccatcttccttggcaacaatttcttggatgccacttttacttactc |
20781944 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| |||| || |||| |||||||||||||||| | ||| || | |||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
20781945 |
gaagactttgaagttgcaacatacctttagccactgagagtggaaagatgtttatcaagtttttgcatcccaccacagatacatcacttaaattttgaaa |
20782044 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgag |
507 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||||| ||||| |
|
|
| T |
20782045 |
ccgcatagtgtaatgtggatcctctttccatacatgcttcagttttggaagattagataattttaatttcttcagttgag |
20782124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 126 - 509
Target Start/End: Original strand, 20849650 - 20850034
Alignment:
| Q |
126 |
aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagt |
225 |
Q |
| |
|
||||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||| | |
|
|
| T |
20849650 |
aatagctctatttttggacatccgaacaaatttattgttttcaatgatttacattgaagagaatgggccacaacaaagaatgccttaagtttgggcaaat |
20849749 |
T |
|
| Q |
226 |
attcaagtttaatgtaagtcaaatg-aggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttactta |
324 |
Q |
| |
|
||| |||| ||||| | || || || |||||||||||||||||| ||||| | |||| |||| |||| ||||||||| | |||||||||| ||| || |
|
|
| T |
20849750 |
attgaagtataatggatgttaactgcaggaaacacaaatttaactatctcctttgttgcttcctcctctttaacaatttcttgaatcccacagctacgta |
20849849 |
T |
|
| Q |
325 |
ttcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttg |
424 |
Q |
| |
|
| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20849850 |
ctggaagactttgaagttgcatcatatctctagccactgagaatggaaagaggcttatcaagcttttgcaatccacaacagatacatcacttaaattttc |
20849949 |
T |
|
| Q |
425 |
aaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
20849950 |
aaacctcatagtgtaatatggatcctctttccatacatgcttcagttttggaagattggatagttttaatttcttcaattgagta |
20850034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 126 - 509
Target Start/End: Original strand, 20841556 - 20841940
Alignment:
| Q |
126 |
aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagt |
225 |
Q |
| |
|
||||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||| | |
|
|
| T |
20841556 |
aatagctctatttttggacatccgaacaaatttattgttttcaatgatttacattgaagagaatgggccacaacaaagaatgccttaagtttgggcaaat |
20841655 |
T |
|
| Q |
226 |
attcaagtttaatgtaagtcaaatg-aggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttactta |
324 |
Q |
| |
|
||| |||| ||||| | || || || |||||||||||||||||| ||||| | |||| |||| |||| ||||||||| | |||||||||| ||| || |
|
|
| T |
20841656 |
attgaagtataatggatgttaactgcaggaaacacaaatttaactatctcctttgttgcttcctcctctttaacaatttcttgaatcccacagctacgta |
20841755 |
T |
|
| Q |
325 |
ttcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttg |
424 |
Q |
| |
|
| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20841756 |
ctggaagactttgaagttgcatcatatctctagccactgagaatggaaagaggcttatcaagcttttgcaatccacaacagatacatcacttaaattttc |
20841855 |
T |
|
| Q |
425 |
aaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||||||||||| |
|
|
| T |
20841856 |
aaacctcatagtgtaatgtggatcctctttccatacatgtttcagttttggaagattgaatagttttaattttttcaattgagta |
20841940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 20768902 - 20768986
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaa |
124 |
Q |
| |
|
|||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||| || || | || |||| ||||||| |||| |
|
|
| T |
20768902 |
ctacacttacctcttcaattacaaaaagaggttgatattgagagatattgagctcatcaattcttgagcttttttggtgtctcaa |
20768986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 20778696 - 20778780
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaa |
124 |
Q |
| |
|
|||| |||||||||||||| |||||||||| ||||||| ||||||||| ||||| || || | || |||| ||||||| |||| |
|
|
| T |
20778696 |
ctacacttacctcttcaattacaaaaagaggttgatattgagagatattgagctcatcaattcttgagcttttttggtgtctcaa |
20778780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 20841478 - 20841542
Alignment:
| Q |
60 |
acaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaa |
124 |
Q |
| |
|
|||||||||| ||||| |||||||||||| | ||| ||||||||||| ||||| ||||| |||| |
|
|
| T |
20841478 |
acaaaaagaggttgattagttgagatattgagatcatcatttttggaagtttctcggtgtctcaa |
20841542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 20849572 - 20849636
Alignment:
| Q |
60 |
acaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaa |
124 |
Q |
| |
|
|||||||||| ||||| |||||||||||| | ||| ||||||||||| ||||| ||||| |||| |
|
|
| T |
20849572 |
acaaaaagaggttgattagttgagatattgagatcatcatttttggaagtttctcggtgtctcaa |
20849636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 47 - 506
Target Start/End: Original strand, 38052515 - 38052986
Alignment:
| Q |
47 |
tacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagctct |
134 |
Q |
| |
|
||||||||||||||||||||| | ||||||| || |||||| |||| ||||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
38052515 |
tacctcttcaatcacaaaaaggggttgatattgagatatattgacctcatcatttgtggagctttcttggtgtttcaaaggttctgccttaaatagctct |
38052614 |
T |
|
| Q |
135 |
atatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaagtt |
234 |
Q |
| |
|
|| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| | | ||||| |
|
|
| T |
38052615 |
atttttggacatccgaacaacttgatcattttcaatgatttacattgaagagaatgaactccaacaaagaatgccttaagtttggtcaagaaattaagtt |
38052714 |
T |
|
| Q |
235 |
taatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaagact |
334 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| | | |||||| |
|
|
| T |
38052715 |
caatggatgtcaaatgaggaaacacaaatttaaccatttcatctgttccttcttccttggcaacaatttcttcaatcccacagttactgactagaagaca |
38052814 |
T |
|
| Q |
335 |
ttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctcata |
434 |
Q |
| |
|
||||||||| |||||||| |||| | |||||||||||||||||||| || | | | ||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38052815 |
ttgaagttgcatcatatctttagccagtgagagtggaaagaggcttatcaagttctcacatcccacaacagatacatcacttaaattttgaaacctcata |
38052914 |
T |
|
| Q |
435 |
gtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
38052915 |
gtgtaatgtggatcctctttccatacatgcttcagttttggaagattagatagttttaatttcttcaattga |
38052986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 45 - 509
Target Start/End: Original strand, 30702565 - 30703038
Alignment:
| Q |
45 |
cttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aatagct |
132 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||| || ||||||||| || |||| ||||||| |
|
|
| T |
30702565 |
cttacctcttcaatcacaaaaagaggttgatattttgagatattgagctcatcatttcaggtgctttcttggagtctcaaaggttctgctttaaatagct |
30702664 |
T |
|
| Q |
133 |
ctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtattcaag |
232 |
Q |
| |
|
|||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||| ||| |||||||| |
|
|
| T |
30702665 |
ctatatttggacatgaaaacaactttatcgttttcaatgatttacattgaagagaatggaccccaagaaaaaatgccttaagtttgggcaaatattcaag |
30702764 |
T |
|
| Q |
233 |
tttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattcgaaga |
332 |
Q |
| |
|
| | | | || ||| ||||||||||||||||||| ||||| | |||||||| |||| |||||||||| | ||||||||| |||||| | ||||| |
|
|
| T |
30702765 |
cgtgagggatgttaaacgaggaaacacaaatttaactatctctttcgttccttc---cttggcaacaatttcttgaatcccacaattacttgcttgaaga |
30702861 |
T |
|
| Q |
333 |
ctttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaacctca |
432 |
Q |
| |
|
||||||||||| |||||||||||| || ||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30702862 |
ctttgaagttgcatcatatctctagaaaccgagagtggaaagaagcttatcaagcttttgcattccgcaacagatacatcacttaaattttgaaacctca |
30702961 |
T |
|
| Q |
433 |
tagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
||| ||||||||||||||||||| |||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
30702962 |
tagggtaatgtggatcctctttcgatacatgcttcagttttggaagattagatagttttaatttcttcaattgagta |
30703038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 29 - 509
Target Start/End: Original strand, 38054695 - 38055187
Alignment:
| Q |
29 |
tatatttgacactactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat--- |
125 |
Q |
| |
|
||||||| || |||| | |||||||||||||||||| |||| ||||||| ||||||||||| ||||| ||||| | || |||||||| ||| |||| |
|
|
| T |
38054695 |
tatatttaacgctacccatacctcttcaatcacaaagagaggttgatattttgagatattgagctcatcatttcttgagctttcttgttgtctcaaaggt |
38054794 |
T |
|
| Q |
126 |
---------aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatt |
216 |
Q |
| |
|
||||| ||||| |||||||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||| ||||| || |
|
|
| T |
38054795 |
tcttccttaaatagatctattcttggacatctgaacaacttgattgttttcaaagatttacattgaagagaatgagccccaacaaagaatgtcttaagtt |
38054894 |
T |
|
| Q |
217 |
tggtcaagtattcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccaca |
316 |
Q |
| |
|
||| ||| | ||||||| | ||| | || ||||||||||||||||| ||||| |||||| ||||||||| |||||| |||| ||||| | ||||||||| |
|
|
| T |
38054895 |
tgggcaaatcttcaagtgtgatggatgttaaatgaggaaacacaaacttaactatctcacatgttccttcgtccttggcaacgatttcttgaatcccaca |
38054994 |
T |
|
| Q |
317 |
gttacttattcgaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcactt |
416 |
Q |
| |
|
|||||||| | |||||||||||||| | ||||||||||| |||||||||||||||||||||| || |||| |||||| |||| |||||||| || |
|
|
| T |
38054995 |
gttacttactttcagactttgaagttgcattatatctctagccactgagagtggaaagaggcttatcaaactttcacattccttaacatatacatcattt |
38055094 |
T |
|
| Q |
417 |
aaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattgagta |
509 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
38055095 |
atattttgaaacctcatagtgtaatgtggatcctccttccatacatgcttcaattttggaagattagatagttttaatttcttcaattgagta |
38055187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 40 - 506
Target Start/End: Complemental strand, 12137 - 11659
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||| ||||| |||| | |||| | | |||| || |
|
|
| T |
12137 |
ctactcttacctcttcaagcacaaaaagaggttgagatgttgagatattgagctcatcatttacggaattctctttttatctcaaaggctctgccttaaa |
12038 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||| ||| ||||||||| |||| || || ||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || || ||| | | |
|
|
| T |
12037 |
tagctgtatttttggacatccatagaagttgatcgttttcaatgatttacagtgaagagaatgaaccccaacatagaatgcctcaagttcttgcaaattt |
11938 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||| | ||||| | |
|
|
| T |
11937 |
agaagtttaatgaatgtcaaatgaggaaacacaaatttaaccatctcatttgttccttcttccttgccaacaatttcttgaatcccacactgacttactt |
11838 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||| |||||||||||| || ||||| |||||| ||||||||| |||| ||||||||| ||| |
|
|
| T |
11837 |
gaagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttgtcaagctttcacattcctcaacagatatatcaattaaattttcaaa |
11738 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
||| ||||||||||||||||| || |||||||||| |||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
11737 |
cctaatagtgtaatgtggatcatccttccatacatgcttcagatttggaagattagatagttttaatttcttcaattga |
11659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 40 - 506
Target Start/End: Complemental strand, 7572 - 7094
Alignment:
| Q |
40 |
ctactcttacctcttcaatcacaaaaagagcttgatatgttgagatattgtgctcaacatttttggaactttcttggtgtttcaat------------aa |
127 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||| |||||||||||||| ||||| ||||| |||| | |||| || | |||| || |
|
|
| T |
7572 |
ctactcttacctcttcaagcacaaaaagaggttgagatgttgagatattgagctcatcatttacggaattctctttgtatctcaaaggctctgccttaaa |
7473 |
T |
|
| Q |
128 |
tagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagtat |
227 |
Q |
| |
|
||||||||| ||||||||| |||| || | ||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || || ||| | | |
|
|
| T |
7472 |
tagctctatttttggacatccatagaagtggatcgttttcaatgatttacagtgaagagaatgaaccccaacatagaatgcctcaagttcttgcaaattt |
7373 |
T |
|
| Q |
228 |
tcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttattc |
327 |
Q |
| |
|
| |||| ||||| | || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||| ||||| | ||||| | |
|
|
| T |
7372 |
tgaagtgtaatggatgttaaatgctgaaacacaaatttaaccatctcatttgttccttcttccttgccaacaatttcttgaataccacactgacttactt |
7273 |
T |
|
| Q |
328 |
gaagactttgaagttgtttcatatctctagctactgagagtggaaagaggcttaacaggcttttgcattccacaacagatacatcacttaaattttgaaa |
427 |
Q |
| |
|
||||||||||||||| ||||||||||||| |||||||| |||||||||||| || ||||| |||||| ||||||||| |||| ||||||||| ||| |
|
|
| T |
7272 |
taagactttgaagttgcatcatatctctagccactgagagcggaaagaggcttgtcaagctttcacattcctcaacagatatatcaattaaattttcaaa |
7173 |
T |
|
| Q |
428 |
cctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttctaatttcttcaattga |
506 |
Q |
| |
|
||| ||||||||||||||||| || |||||||||| |||||| ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
7172 |
cctaatagtgtaatgtggatcatccttccatacatgcttcagatttggaagattagatagttttaatttcttcaattga |
7094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 126 - 352
Target Start/End: Original strand, 32466 - 32692
Alignment:
| Q |
126 |
aatagctctatatttggacattcatacaactttatctttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaaatttggtcaagt |
225 |
Q |
| |
|
||||||||||| |||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
32466 |
aatagctctattgttggacatgtgaacaacatgatcgttttcaatgatttacattgaagagaatgaaccccaacaaagaatgccttaagtttggtcaagt |
32565 |
T |
|
| Q |
226 |
attcaagtttaatgtaagtcaaatgaggaaacacaaatttaaccatctcatctgttccttcttccttgacaacaatttcatcaatcccacagttacttat |
325 |
Q |
| |
|
| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||||| | ||||| |
|
|
| T |
32566 |
actcaaggttaatggaagtcaaatgaggaaacacaaatttaaccatctcatatgttccttcttccttggccacaatttctagaatcccacactgacttac |
32665 |
T |
|
| Q |
326 |
tcgaagactttgaagttgtttcatatc |
352 |
Q |
| |
|
| |||||||||||||||| ||||||| |
|
|
| T |
32666 |
ttgaagactttgaagttgcatcatatc |
32692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 392 - 509
Target Start/End: Original strand, 34281 - 34398
Alignment:
| Q |
392 |
gcattccacaacagatacatcacttaaattttgaaacctcatagtgtaatgtggatcctctttccatacatacttcagttttggaagattggatagttct |
491 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| | |
|
|
| T |
34281 |
gcatcccacaacagatacatcacttaaattttcaaacttcatagtgtaatgtggatcctttttccatacatgcttcagttttggaagattagatagtttt |
34380 |
T |
|
| Q |
492 |
aatttcttcaattgagta |
509 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
34381 |
aatttcttcaattgagta |
34398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University