View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_high_86 (Length: 399)
Name: NF20384_high_86
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_high_86 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 27522074 - 27521885
Alignment:
| Q |
7 |
gtattatcaatatatatatttagctctatgttttgtagtttccctattttgaagacgctattagtgtactgtaagcttaattatagcttaattataaggt |
106 |
Q |
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| T |
27522074 |
gtattatcaatatatatatttggctctatgttttgtagtttccctattttgaagacgctaatagtgtactgtaagcttaattata-----------aggt |
27521986 |
T |
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| Q |
107 |
cctaagtggaattaagcttttctatgtattaattatttatatagcttaaaggcaagtccggtaatgtaatgacattcgagctgattaagcattgactttt |
206 |
Q |
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| T |
27521985 |
cctaagtggaattaagcttttctatgtattaattatttatatagcttaaaggcaagtcctgtaatgtaatgacattcgagctgatcaagcattgactttt |
27521886 |
T |
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