View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_low_136 (Length: 350)
Name: NF20384_low_136
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_low_136 |
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Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 10 - 333
Target Start/End: Complemental strand, 9942732 - 9942409
Alignment:
| Q |
10 |
ataatactaagagagatagttttgatcaataacttgcagtacaagttatctgaatgtaggacaataagtgtagtacaatgtagcttagcagtaccataac |
109 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9942732 |
ataagactaagagagatagttttgatcaataacttgcagtacaagttatctgaatgtaggacaataagtgtagtacaatgtagcttagcagtaccataac |
9942633 |
T |
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| Q |
110 |
aatgtgtgtatatatatcaattgtacttcagatttaaacattgaataagatgaatacacttttccctcatttcatattactttactttgtgagttgttgc |
209 |
Q |
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||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9942632 |
aatgtgtgtgtatatgtcaattgtacttcagatttaaacattgaataagatgaatacacttttccctcatttcatattactttactttgtgagttgttgc |
9942533 |
T |
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| Q |
210 |
actatcaacaaaggttgtcttgttagcttggtgttttagtaactacactttactgtcatttacattagacaagaaaatatatagctgcaataacttagta |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
9942532 |
actatcaacaaaggttgtcttgttagcttggtgttttaataactacactttactgtcatttacattagacaagaaaatatatagctgcaaaaacttagta |
9942433 |
T |
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| Q |
310 |
agtacttgattgaactatactaat |
333 |
Q |
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|||||||||||||||||||||||| |
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| T |
9942432 |
agtacttgattgaactatactaat |
9942409 |
T |
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