View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_low_195 (Length: 280)
Name: NF20384_low_195
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_low_195 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 8 - 256
Target Start/End: Complemental strand, 46526360 - 46526112
Alignment:
| Q |
8 |
tgaaaagaagggaggaaaataaagtgacatgcaatgcattacatgcaaataacaagaaactaacaatatagtataaaaatgtaattaatgaacgaacatt |
107 |
Q |
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| T |
46526360 |
tgaaaagatgggaggaaaataaagtgacatgcaatgcattacatgcaaataacaagaaactaacaatatagtataaaaatgtaattaatgaacgaacatt |
46526261 |
T |
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| Q |
108 |
aacattgttgcgtattggaattgtgtgtcagtgtgtatgacttaccactctttcttttttatgggcataataatataaactttctcctcactgctaccac |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46526260 |
gacattgttgcgtattggaattgtgtgtcagtgtgtatgacttacaactctttcttttttatgggcataataatataaactttctcctcactgctaccac |
46526161 |
T |
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| Q |
208 |
ttttccttgagaaataatttcatagttgcatgagctcgctctctctctc |
256 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
46526160 |
ttttccttgagaaataatttcatagttccatgagctcgctctctctctc |
46526112 |
T |
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