View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_low_196 (Length: 280)
Name: NF20384_low_196
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_low_196 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 52764039 - 52764307
Alignment:
| Q |
1 |
ctaatatcacttccccgcaatttaatttactgcatttctgtgtcagtctacatgcacaagaacgtttggctgaatttgacttgttggttctgtttggatt |
100 |
Q |
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| T |
52764039 |
ctaatatcacttccccgcaatttaatttactgcatttctgtgtcagtctacatgcacaagaacgtttggctgaatttgacttgttggttctgtttggatt |
52764138 |
T |
|
| Q |
101 |
cttcagaaactgacccaccaagtgcacaacaatccatcatccgtatataactaaaattaaaattgtacccttatgataattgattagtcctgttctgcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52764139 |
cttcagaaactgacccaccaagtgcacaacaatccatcatccgtatataactaaaattaaaattgtacccttatgataattgattagtcctgttctgcat |
52764238 |
T |
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| Q |
201 |
tgtgtttcattgtcatatatttacccagcattagcagtatgacaatggaaaatacaattttgaatctct |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52764239 |
tgtgtttcattgtcatatatttacccagcattagcagtatgacaatggaaaatacaattttgaatctct |
52764307 |
T |
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