View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20384_low_197 (Length: 279)

Name: NF20384_low_197
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20384_low_197
NF20384_low_197
[»] chr6 (27 HSPs)
chr6 (138-262)||(33665026-33665150)
chr6 (2-75)||(33664924-33664997)
chr6 (68-120)||(6235910-6235962)
chr6 (154-224)||(33687866-33687933)
chr6 (74-120)||(7270362-7270408)
chr6 (75-120)||(6137375-6137420)
chr6 (75-120)||(18052952-18052997)
chr6 (79-120)||(34518101-34518142)
chr6 (75-120)||(34890640-34890685)
chr6 (75-120)||(34994376-34994421)
chr6 (72-120)||(32753582-32753630)
chr6 (76-120)||(35167864-35167908)
chr6 (69-120)||(9046076-9046127)
chr6 (78-120)||(21540386-21540429)
chr6 (78-120)||(7438803-7438845)
chr6 (78-120)||(9046495-9046537)
chr6 (78-120)||(15932729-15932771)
chr6 (70-120)||(17244655-17244705)
chr6 (75-120)||(2516998-2517043)
chr6 (75-120)||(7271038-7271083)
chr6 (79-120)||(34994789-34994830)
chr6 (84-120)||(5937818-5937854)
chr6 (84-120)||(6137786-6137822)
chr6 (84-120)||(10412910-10412946)
chr6 (76-120)||(21856964-21857008)
chr6 (80-120)||(29260532-29260572)
chr6 (78-118)||(34517271-34517311)
[»] chr1 (32 HSPs)
chr1 (67-120)||(46593639-46593692)
chr1 (69-120)||(27547659-27547710)
chr1 (69-120)||(10831121-10831172)
chr1 (78-120)||(1763083-1763125)
chr1 (74-120)||(8760267-8760313)
chr1 (70-120)||(23598063-23598113)
chr1 (74-120)||(37285136-37285182)
chr1 (74-120)||(37467629-37467675)
chr1 (75-120)||(12481468-12481513)
chr1 (75-120)||(37304024-37304069)
chr1 (79-120)||(37576181-37576222)
chr1 (76-120)||(49644079-49644123)
chr1 (65-120)||(4550945-4551000)
chr1 (81-120)||(6798216-6798255)
chr1 (77-120)||(26723210-26723253)
chr1 (81-120)||(35612491-35612530)
chr1 (78-120)||(8762808-8762850)
chr1 (76-114)||(9006605-9006643)
chr1 (78-120)||(23476750-23476792)
chr1 (82-120)||(25995787-25995825)
chr1 (77-119)||(32047741-32047783)
chr1 (78-120)||(45053098-45053140)
chr1 (79-120)||(13109236-13109277)
chr1 (79-120)||(13183766-13183807)
chr1 (79-120)||(16023897-16023938)
chr1 (69-122)||(18794036-18794089)
chr1 (79-120)||(27548078-27548119)
chr1 (79-120)||(49140551-49140592)
chr1 (76-120)||(2064620-2064664)
chr1 (84-120)||(20306007-20306043)
chr1 (84-120)||(38000494-38000530)
chr1 (84-120)||(44323069-44323105)
[»] chr7 (24 HSPs)
chr7 (70-118)||(38677089-38677137)
chr7 (74-120)||(36423809-36423855)
chr7 (77-120)||(10526309-10526352)
chr7 (78-120)||(6356764-6356806)
chr7 (78-120)||(8416484-8416526)
chr7 (78-120)||(48626472-48626514)
chr7 (76-120)||(4155595-4155639)
chr7 (68-120)||(8417345-8417397)
chr7 (72-120)||(44332928-44332976)
chr7 (81-120)||(7579281-7579320)
chr7 (77-120)||(8542497-8542540)
chr7 (81-124)||(34037316-34037359)
chr7 (78-120)||(6356694-6356736)
chr7 (78-120)||(19681904-19681946)
chr7 (78-120)||(21391189-21391231)
chr7 (78-120)||(36674138-36674180)
chr7 (75-120)||(1114050-1114095)
chr7 (79-120)||(16867707-16867748)
chr7 (79-120)||(21391599-21391640)
chr7 (79-120)||(31638352-31638393)
chr7 (79-116)||(41751650-41751687)
chr7 (79-120)||(41891966-41892007)
chr7 (84-120)||(6356291-6356327)
chr7 (80-120)||(41192094-41192134)
[»] chr8 (23 HSPs)
chr8 (74-120)||(22763342-22763388)
chr8 (72-120)||(1646494-1646542)
chr8 (76-120)||(33296093-33296137)
chr8 (77-120)||(11920181-11920224)
chr8 (79-120)||(15048399-15048440)
chr8 (61-118)||(29770410-29770466)
chr8 (82-118)||(29769366-29769402)
chr8 (78-120)||(7535242-7535284)
chr8 (82-120)||(11174043-11174081)
chr8 (74-116)||(15871616-15871658)
chr8 (77-119)||(24666088-24666130)
chr8 (78-120)||(27473480-27473522)
chr8 (78-120)||(33819784-33819826)
chr8 (74-120)||(40659978-40660024)
chr8 (78-120)||(45277005-45277047)
chr8 (79-120)||(15741641-15741682)
chr8 (70-115)||(40094825-40094870)
chr8 (79-120)||(45077221-45077262)
chr8 (77-118)||(45435493-45435534)
chr8 (84-120)||(1651980-1652016)
chr8 (84-120)||(1740356-1740392)
chr8 (84-120)||(5434905-5434941)
chr8 (68-112)||(24457005-24457049)
[»] chr4 (30 HSPs)
chr4 (74-120)||(15478054-15478100)
chr4 (75-120)||(47603770-47603815)
chr4 (77-120)||(53995344-53995387)
chr4 (74-120)||(4513325-4513371)
chr4 (70-120)||(12817797-12817847)
chr4 (78-120)||(14985330-14985372)
chr4 (78-120)||(19088750-19088792)
chr4 (74-120)||(39448897-39448943)
chr4 (74-120)||(42855748-42855794)
chr4 (78-120)||(55022283-55022325)
chr4 (79-120)||(53751311-53751352)
chr4 (77-121)||(21763589-21763633)
chr4 (77-120)||(1433680-1433723)
chr4 (77-120)||(16038203-16038246)
chr4 (73-120)||(25182221-25182268)
chr4 (77-120)||(44991687-44991730)
chr4 (77-120)||(47602941-47602984)
chr4 (73-120)||(50769230-50769277)
chr4 (78-120)||(15477644-15477686)
chr4 (78-120)||(50768820-50768862)
chr4 (74-116)||(52692852-52692894)
chr4 (79-120)||(38339901-38339942)
chr4 (77-118)||(44125881-44125922)
chr4 (79-120)||(44991279-44991320)
chr4 (84-120)||(30683531-30683567)
chr4 (84-120)||(43566383-43566419)
chr4 (84-120)||(43734291-43734327)
chr4 (84-120)||(44125627-44125663)
chr4 (84-120)||(52557092-52557128)
chr4 (80-120)||(53259547-53259587)
[»] chr2 (18 HSPs)
chr2 (70-120)||(24372376-24372426)
chr2 (67-120)||(10991839-10991892)
chr2 (76-120)||(24138065-24138109)
chr2 (75-120)||(8174294-8174339)
chr2 (75-120)||(17050925-17050970)
chr2 (67-120)||(33470332-33470385)
chr2 (76-120)||(17032590-17032634)
chr2 (77-120)||(13192986-13193029)
chr2 (81-120)||(41474084-41474123)
chr2 (74-120)||(8445198-8445244)
chr2 (78-120)||(19816113-19816155)
chr2 (79-120)||(24138916-24138957)
chr2 (79-120)||(29472242-29472283)
chr2 (79-120)||(34735752-34735793)
chr2 (79-120)||(36713588-36713629)
chr2 (72-120)||(15406165-15406212)
chr2 (80-120)||(15744458-15744498)
chr2 (76-120)||(29472651-29472695)
[»] scaffold0221 (1 HSPs)
scaffold0221 (76-120)||(8426-8470)
[»] chr5 (16 HSPs)
chr5 (75-118)||(2596384-2596427)
chr5 (64-120)||(27185859-27185915)
chr5 (77-120)||(9989321-9989364)
chr5 (73-120)||(24040079-24040126)
chr5 (78-120)||(19185593-19185635)
chr5 (78-120)||(25567397-25567439)
chr5 (78-120)||(27186282-27186324)
chr5 (78-120)||(36440609-36440651)
chr5 (74-119)||(31756712-31756757)
chr5 (79-120)||(38958724-38958765)
chr5 (79-120)||(38959132-38959173)
chr5 (84-120)||(19184602-19184638)
chr5 (84-120)||(25183062-25183098)
chr5 (84-120)||(32288083-32288119)
chr5 (84-120)||(35569780-35569816)
chr5 (80-116)||(37424677-37424713)
[»] chr3 (38 HSPs)
chr3 (73-120)||(28986550-28986597)
chr3 (78-120)||(26318591-26318633)
chr3 (70-120)||(40639462-40639512)
chr3 (74-120)||(53716702-53716748)
chr3 (79-120)||(10506357-10506398)
chr3 (79-120)||(54108311-54108352)
chr3 (80-120)||(47669260-47669300)
chr3 (76-120)||(51311863-51311907)
chr3 (80-119)||(21969630-21969669)
chr3 (80-119)||(21992066-21992105)
chr3 (66-120)||(39664593-39664648)
chr3 (77-120)||(49528147-49528190)
chr3 (78-120)||(4773242-4773284)
chr3 (82-120)||(8474255-8474293)
chr3 (70-120)||(12203960-12204010)
chr3 (78-120)||(18464865-18464907)
chr3 (78-120)||(27801898-27801940)
chr3 (82-120)||(29818180-29818218)
chr3 (78-120)||(39664183-39664225)
chr3 (79-121)||(54752163-54752205)
chr3 (79-120)||(12791585-12791626)
chr3 (75-120)||(15791513-15791558)
chr3 (70-115)||(16931597-16931642)
chr3 (78-119)||(22151844-22151885)
chr3 (79-120)||(24428976-24429017)
chr3 (75-116)||(41835339-41835380)
chr3 (79-120)||(42591784-42591825)
chr3 (79-120)||(44317624-44317665)
chr3 (79-120)||(45306832-45306873)
chr3 (77-118)||(50394371-50394412)
chr3 (84-120)||(10505953-10505989)
chr3 (76-120)||(11256100-11256144)
chr3 (84-120)||(11256512-11256548)
chr3 (78-118)||(12992360-12992400)
chr3 (84-120)||(13866025-13866061)
chr3 (67-119)||(30681827-30681879)
chr3 (80-120)||(39241359-39241399)
chr3 (84-120)||(44894149-44894185)
[»] scaffold0134 (1 HSPs)
scaffold0134 (76-116)||(14548-14588)
[»] scaffold0186 (1 HSPs)
scaffold0186 (77-120)||(24160-24203)
[»] scaffold0115 (2 HSPs)
scaffold0115 (77-120)||(22562-22605)
scaffold0115 (78-120)||(21511-21553)
[»] scaffold0225 (1 HSPs)
scaffold0225 (74-120)||(9777-9823)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 138 - 262
Target Start/End: Original strand, 33665026 - 33665150
Alignment:
Q  138 ttgaaccacggctacgtgtttcttatagtggtctaaatggctatatgtgggcttgatattagatatgtctaaagctcatggtatgatgattcattgagtg 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  33665026 ttgaaccacggctacgtgtttcttatagtggtctaaatggctatatgtgggcttaatattagatatgtctaaagcttatggtatgatgattcattgagtg 33665125  T
Q  238 gtcnnnnnnnaaggcagttttgaat 262  Q
    |||       |||||||||||||||    
T  33665126 gtctttttttaaggcagttttgaat 33665150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 33664924 - 33664997
Alignment:
Q  2 aactaagttttcattccccggtccttctttgacacatcttgtacttgagcgactaggattctgattaatttatt 75  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||    
T  33664924 aactaagtttttattccccggtccttctttgacacaacttgtgcttgagcgactaggattctggtgaatttatt 33664997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 6235910 - 6235962
Alignment:
Q  68 aatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  6235910 aattttttttaggctaaattacctttttggtcctctaactatttaattggtat 6235962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 33687866 - 33687933
Alignment:
Q  154 tgtttcttatagtggtctaaatggctatatgtgggcttgatattagatat-gtctaaagctcatggtatgat 224  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||| |||| |||||    
T  33687866 tgtttcttatagtggtctaaatg----tatgtgggcttgatattagatatagtctaaagcttatggcatgat 33687933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 7270408 - 7270362
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  7270408 ttttaggcttaattatctttttggtcctttaactatttaattggtat 7270362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 6137375 - 6137420
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||    
T  6137375 tttaggcttaattacctttttggtcctctaactatttaattggtat 6137420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 18052952 - 18052997
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||    
T  18052952 tttaggctaaattacttttttgatcctttaactatttaattggtat 18052997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 34518142 - 34518101
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  34518142 ggctaaattacctttttggtcctctaactatttaattggtat 34518101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 34890640 - 34890685
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  34890640 tttaggctaaattacctttttgttcctctaactatttaattggtat 34890685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 34994376 - 34994421
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||    
T  34994376 tttaggtttaattacctttttggtcctttaactatttaattggtat 34994421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 32753630 - 32753582
Alignment:
Q  72 tattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||| || |||||||||||||||| | ||||||||||||||||||    
T  32753630 tattttagacttaattacctttttggtcctctaactatttaattggtat 32753582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 35167908 - 35167864
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||    
T  35167908 ttaggctaaattacatttttggtcctctaactatttaattggtat 35167864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 9046076 - 9046127
Alignment:
Q  69 atttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| ||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  9046076 atttaattttggctaaattacttttttggtcctctaactatttaattggtat 9046127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 21540429 - 21540386
Alignment:
Q  78 aggctaaattaccttttt-ggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| |||| ||||||||||||||||||||    
T  21540429 aggctaaattaccttttttggtcctttaactatttaattggtat 21540386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 7438803 - 7438845
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  7438803 aggctaaattatctttttggtcctctaactatttaattggtat 7438845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 9046537 - 9046495
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  9046537 aggcttaattacctttttggtcctctaactatttaattggtat 9046495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 15932729 - 15932771
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | |||||||||| |||||||    
T  15932729 aggctaaattacctttttggtcctctaactatttagttggtat 15932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 17244655 - 17244705
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| | |||| |||||||||||||||| | ||||||||||||||||||    
T  17244655 tttattattggcttaattacctttttggtcctctaactatttaattggtat 17244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 2516998 - 2517043
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||    
T  2516998 tttaggttaaattacatttttggtcctctaactatttaattggtat 2517043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 7271083 - 7271038
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||| |||| ||||||||||| | ||||||||||||||||||    
T  7271083 tttaggcttaattgcctttttggtcctctaactatttaattggtat 7271038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 34994830 - 34994789
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  34994830 ggctaaattacctttttagtcatctaactatttaattggtat 34994789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 5937818 - 5937854
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  5937818 aattacctttttggtcctctaactatttaattggtat 5937854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 6137822 - 6137786
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  6137822 aattacctttttggtcctctaactatttaattggtat 6137786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 10412946 - 10412910
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  10412946 aattatctttttggtcttttaactatttagttggtat 10412910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 21857008 - 21856964
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||| | ||| |||||| |||||||    
T  21857008 ttaggctaaattacctttttggtcctctaagtatttagttggtat 21856964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 29260532 - 29260572
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||| ||||| | ||||||||||||||||||    
T  29260532 gctaaattacctttctggtcctctaactatttaattggtat 29260572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 34517271 - 34517311
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggt 118  Q
    |||||||||||| ||||||||| | ||||||||||||||||    
T  34517271 aggctaaattacttttttggtcctctaactatttaattggt 34517311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 46593692 - 46593639
Alignment:
Q  67 taatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  46593692 taatttattttaggctaaattacttttttggtcctctaactatttaattggtat 46593639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 27547659 - 27547710
Alignment:
Q  69 atttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||||    
T  27547659 atttttttttggcttaattacctttttggtcttttaactatttaattggtat 27547710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 10831121 - 10831172
Alignment:
Q  69 atttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||  |||||||||||||||||||||| | ||||||||||||||||||    
T  10831121 atttattaaaggctaaattacctttttggtcctctaactatttaattggtat 10831172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 1763125 - 1763083
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  1763125 aggctaaattacctttttggtcctctaactatttaattggtat 1763083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 8760267 - 8760313
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||    
T  8760267 ttttaggcttaattacctttttggtcctctaactatttaattggtat 8760313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 23598063 - 23598113
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||| |||||||||| | ||||||||||||||||||    
T  23598063 tttaatttaggctaaattatctttttggtcctctaactatttaattggtat 23598113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 37285182 - 37285136
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  37285182 tttttggctaaattacatttttggtcctttaactatttaattggtat 37285136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 37467675 - 37467629
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  37467675 tttttggctaaattacctttttggtcatctaactatttaattggtat 37467629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 12481513 - 12481468
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||    
T  12481513 tttaggctaaattacctttttggtcctctaactatttagttggtat 12481468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 37304024 - 37304069
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||    
T  37304024 tttaggctaaattacctttttggtcctctaaccatttaattggtat 37304069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 37576181 - 37576222
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  37576181 ggctaaattacctttttggtcctttaactattaaattggtat 37576222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 49644123 - 49644079
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||    
T  49644123 ttaggctaaattatctttttggtcctctaactatttaattggtat 49644079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 4551000 - 4550945
Alignment:
Q  65 attaatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| ||| ||||||||||| | |||||||||| |||||||||||||| ||||    
T  4551000 attaattcattctaggctaaattgcatttttggtctcttaactatttaattagtat 4550945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 6798255 - 6798216
Alignment:
Q  81 ctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  6798255 ctaaattatctttttggtcttctaactatttaattggtat 6798216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 26723253 - 26723210
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||| || | ||||||||||||||||||    
T  26723253 taggctaaattacctttttgatcctctaactatttaattggtat 26723210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 35612530 - 35612491
Alignment:
Q  81 ctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  35612530 ctaaattacctttttggtcctctaactatttaattggtat 35612491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 8762850 - 8762808
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  8762850 aggctaaattacatttttggtcatctaactatttaattggtat 8762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 9006643 - 9006605
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaat 114  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  9006643 ttaggctaaattatctttttggtcttctaactatttaat 9006605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 23476792 - 23476750
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  23476792 aggctaaattacatttttggtcctctaactatttaattggtat 23476750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 25995787 - 25995825
Alignment:
Q  82 taaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  25995787 taaattacctttttggtcctctaactatttaattggtat 25995825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 32047741 - 32047783
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggta 119  Q
    |||||| |||||||||||||||| | |||||||||||||||||    
T  32047741 taggcttaattacctttttggtcctctaactatttaattggta 32047783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 45053140 - 45053098
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  45053140 aggctaaattacttttttggtcctctaactatttaattggtat 45053098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 13109277 - 13109236
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  13109277 ggctaaattacctttttagtcctctaactatttaattggtat 13109236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13183766 - 13183807
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  13183766 ggctaaattacctttttgatcctctaactatttaattggtat 13183807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 16023897 - 16023938
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  16023897 ggctaaattacttttttggtcctctaactatttaattggtat 16023938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 18794089 - 18794036
Alignment:
Q  69 atttattttaggctaaattacctttttggtcttttaactatttaattggtatat 122  Q
    ||||||||||||||||||| | |||||||||  |||||||||||| | ||||||    
T  18794089 atttattttaggctaaattgcatttttggtcccttaactatttaagtagtatat 18794036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 27548119 - 27548078
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  27548119 ggctaaattaccttttttgtcctctaactatttaattggtat 27548078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 49140592 - 49140551
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||| |||||||||| | ||||||||||||||||||    
T  49140592 ggctaaattatctttttggtcctctaactatttaattggtat 49140551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 2064664 - 2064620
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||| |||||| || | ||||||||||||||||||    
T  2064664 ttaggctaaattacatttttgatcctctaactatttaattggtat 2064620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 20306007 - 20306043
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  20306007 aattacctttttggtcctctaactatttaattggtat 20306043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 38000494 - 38000530
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  38000494 aattacctttttggtcctctaactatttaattggtat 38000530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 44323105 - 44323069
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  44323105 aattacctttttggtcctctaactatttaattggtat 44323069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 38677137 - 38677089
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggt 118  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38677137 tttattttaggctaaattacctttttggtcccttaactatttaattggt 38677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 36423855 - 36423809
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||    
T  36423855 ttttaggctaaattacctttttggtcctctaactatttaattggtat 36423809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 10526309 - 10526352
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  10526309 taggctaaattacctttttggtcctctaactatttaattggtat 10526352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 6356764 - 6356806
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  6356764 aggctaaattacctttttggtcctctaactatttaattggtat 6356806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 8416484 - 8416526
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  8416484 aggctaaattacctttttggtcctctaactatttaattggtat 8416526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 48626514 - 48626472
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  48626514 aggctaaattacctttttggtcctctaactatttaattggtat 48626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 4155595 - 4155639
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||    
T  4155595 ttaggcttaattacctttttggtcctctaactatttaattggtat 4155639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 8417397 - 8417345
Alignment:
Q  68 aatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| ||| |||||||||| |||||||||| | ||||||||||||||||||    
T  8417397 aatttaattttggctaaattatctttttggtcctctaactatttaattggtat 8417345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 44332976 - 44332928
Alignment:
Q  72 tattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  44332976 tattttcggctaaattacatttttggtcctctaactatttaattggtat 44332928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 7579320 - 7579281
Alignment:
Q  81 ctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  7579320 ctaaattatctttttggtcttctaactatttaattggtat 7579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 8542497 - 8542540
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||    
T  8542497 taggctaaattacctttttcgtcttctaactatttagttggtat 8542540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 34037359 - 34037316
Alignment:
Q  81 ctaaattacctttttggtcttttaactatttaattggtatatga 124  Q
    |||||||| |||||||||| | ||||||||||||||||||||||    
T  34037359 ctaaattatctttttggtcctctaactatttaattggtatatga 34037316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 6356736 - 6356694
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  6356736 aggcttaattacctttttggtcctataactatttaattggtat 6356694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 19681946 - 19681904
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | | ||||||||||||||||    
T  19681946 aggctaaattacctttttggtcctctgactatttaattggtat 19681904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 21391189 - 21391231
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  21391189 aggcttaattacctttttggtcctctaactatttaattggtat 21391231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 36674180 - 36674138
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | | ||||||||||||||||    
T  36674180 aggctaaattacctttttggtcctctgactatttaattggtat 36674138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 1114050 - 1114095
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| ||||||||||||||||||| | |||||||||| |||||||    
T  1114050 tttagactaaattacctttttggtcctctaactatttagttggtat 1114095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 16867707 - 16867748
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  16867707 ggctaaattacctttttggtcctctaactatataattggtat 16867748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 21391640 - 21391599
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  21391640 ggctaaattacatttttggtcatctaactatttaattggtat 21391599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 31638393 - 31638352
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||  | ||||||||||||||||||    
T  31638393 ggctaaattacctttttggttctctaactatttaattggtat 31638352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 41751650 - 41751687
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattg 116  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  41751650 ggctaaattatctttttggtcctttaactatttaattg 41751687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 41891966 - 41892007
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  41891966 ggctaaattacttttttggtcctctaactatttaattggtat 41892007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 6356291 - 6356327
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  6356291 aattacctttttggtcatctaactatttaattggtat 6356327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 41192134 - 41192094
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||| ||||||||| | ||||||||||||||||||    
T  41192134 gctaaattacttttttggtcctctaactatttaattggtat 41192094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 22763388 - 22763342
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||    
T  22763388 ttttaggctaaattacctttttggtcctctaactatttaattggtat 22763342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 1646494 - 1646542
Alignment:
Q  72 tattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  1646494 tattttaggcttaattacctttttggtcctctaactatttaattggtat 1646542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 33296137 - 33296093
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  33296137 ttaggctaaattacctttttggtcctctaactatttaattggtat 33296093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 11920224 - 11920181
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  11920224 taggctaaattacctttttggtcatctaactatttaattggtat 11920181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 15048399 - 15048440
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  15048399 ggctaaattacctttttggtcctctaactatttaattggtat 15048440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 29770466 - 29770410
Alignment:
Q  61 tctgattaatttattttaggctaaattacctttttggtcttttaactatttaattggt 118  Q
    ||||||| |||| ||| ||||||||||||||||||||||  |||||||||||||||||    
T  29770466 tctgattgattt-tttaaggctaaattacctttttggtcccttaactatttaattggt 29770410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 29769366 - 29769402
Alignment:
Q  82 taaattacctttttggtcttttaactatttaattggt 118  Q
    ||||||||||||||||||| |||||||||||||||||    
T  29769366 taaattacctttttggtctcttaactatttaattggt 29769402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 7535284 - 7535242
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  7535284 aggctaaattatctttttggtcctctaactatttaattggtat 7535242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 11174081 - 11174043
Alignment:
Q  82 taaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  11174081 taaattacctttttggtcctctaactatttaattggtat 11174043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 15871616 - 15871658
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattg 116  Q
    |||| |||| |||||||||||||||| ||||||||||||||||    
T  15871616 tttttggcttaattacctttttggtcctttaactatttaattg 15871658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 24666130 - 24666088
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggta 119  Q
    |||||| |||||||||||||||| | |||||||||||||||||    
T  24666130 taggcttaattacctttttggtcctctaactatttaattggta 24666088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 27473522 - 27473480
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  27473522 aggctaaattacctttttggtcctctaacaatttaattggtat 27473480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 33819784 - 33819826
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||| ||||||||||||||    
T  33819784 aggctaaattacctttttggtcctctaattatttaattggtat 33819826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 40659978 - 40660024
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  40659978 tttttggctaaattacttttttggtcctctaactatttaattggtat 40660024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 45277047 - 45277005
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  45277047 aggctaaattatctttttggtcctctaactatttaattggtat 45277005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 15741682 - 15741641
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  15741682 ggcttaattacctttttggtcccttaactatttaattggtat 15741641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 40094870 - 40094825
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaatt 115  Q
    |||||||||||| ||||||| |||||||||  ||||||||||||||    
T  40094870 tttattttaggcaaaattacatttttggtcccttaactatttaatt 40094825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 45077221 - 45077262
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  45077221 ggcttaattacctttttggtcctctaactatttaattggtat 45077262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 45435493 - 45435534
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggt 118  Q
    |||||||||||||||||||||||  ||| |||||||||||||    
T  45435493 taggctaaattacctttttggtcccttacctatttaattggt 45435534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 1652016 - 1651980
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  1652016 aattacctttttggtcctctaactatttaattggtat 1651980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 1740392 - 1740356
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  1740392 aattacctttttggtcctctaactatttaattggtat 1740356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 5434905 - 5434941
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  5434905 aattacctttttggtcctctaactatttaattggtat 5434941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 24457049 - 24457005
Alignment:
Q  68 aatttattttaggctaaattacctttttggtcttttaactattta 112  Q
    |||||||||||||||||||| | |||||||||  |||||||||||    
T  24457049 aatttattttaggctaaattgcatttttggtcccttaactattta 24457005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 15478100 - 15478054
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15478100 tttttggctaaattacctttttggtcttctaactatttaattggtat 15478054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 47603815 - 47603770
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||    
T  47603815 tttaggctaaattacctttttggtcctctaactatttaattggtat 47603770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 53995387 - 53995344
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  53995387 taggctaaattacctttttggtcctctaactatttaattggtat 53995344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 4513371 - 4513325
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||    
T  4513371 ttttaggctaaattacctttttggtcctctaactatttagttggtat 4513325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 12817797 - 12817847
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||||||||||  | ||||||||||||||||||    
T  12817797 tttatattaggctaaattacctttttggttctctaactatttaattggtat 12817847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 14985330 - 14985372
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  14985330 aggctaaattacctttttggtcctctaactatttaattggtat 14985372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 19088792 - 19088750
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  19088792 aggctaaattacctttttggtcctctaactatttaattggtat 19088750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 39448943 - 39448897
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  39448943 tttttggctaaattacctttttggtcctctaactatttaattggtat 39448897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 42855794 - 42855748
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  42855794 ttttaggctaaattacctttttagtcatttaactatttaattagtat 42855748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 55022283 - 55022325
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  55022283 aggctaaattacctttttggtcctctaactatttaattggtat 55022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 53751352 - 53751311
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  53751352 ggctaaattacctttttggtcctctaactatttaattggtat 53751311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 21763633 - 21763589
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtata 121  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||    
T  21763633 taggctaaattacatttttggtcctctaactatttaattggtata 21763589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 1433723 - 1433680
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  1433723 taggctaaattacatttttggtcctctaactatttaattggtat 1433680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 16038246 - 16038203
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||| | |||||||||| |||||||    
T  16038246 taggctaaattacctttttggtcctctaactatttagttggtat 16038203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 25182268 - 25182221
Alignment:
Q  73 attttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||| |||||||||||| |||||||||| |||||||    
T  25182268 atttaaggctaaattatctttttggtcttctaactatttagttggtat 25182221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 44991730 - 44991687
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| |||||||||| | ||||||||||||||||||    
T  44991730 taggctaaattatctttttggtcctctaactatttaattggtat 44991687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 47602941 - 47602984
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| |||||||||| | ||||||||||||||||||    
T  47602941 taggctaaattatctttttggtcctctaactatttaattggtat 47602984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 50769277 - 50769230
Alignment:
Q  73 attttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| || |||||||||||||||| | ||||||||||||||||||    
T  50769277 attttagacttaattacctttttggtcctctaactatttaattggtat 50769230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 15477644 - 15477686
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  15477644 aggcttaattacctttttggtcctctaactatttaattggtat 15477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 50768820 - 50768862
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| ||||||||||||| || ||||||||||||||||||||    
T  50768820 aggcttaattacctttttgatcctttaactatttaattggtat 50768862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 52692894 - 52692852
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattg 116  Q
    |||| ||||||||||||||||||||| |||| |||||||||||    
T  52692894 tttttggctaaattacctttttggtcctttagctatttaattg 52692852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 38339942 - 38339901
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  38339942 ggcttaattacctttttggtcctctaactatttaattggtat 38339901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 44125922 - 44125881
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggt 118  Q
    ||||||||||||| ||||||||| | ||||||||||||||||    
T  44125922 taggctaaattacatttttggtcatctaactatttaattggt 44125881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 44991279 - 44991320
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  44991279 ggcttaattacctttttggtcctctaactatttaattggtat 44991320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 30683531 - 30683567
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  30683531 aattacctttttggtcctctaactatttaattggtat 30683567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 43566383 - 43566419
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  43566383 aattatctttttggtcttctaactatttaattggtat 43566419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 43734291 - 43734327
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  43734291 aattacctttttggtcctctaactatttaattggtat 43734327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 44125627 - 44125663
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44125627 aattatctttttggtcctttaactatttaattggtat 44125663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 52557092 - 52557128
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  52557092 aattacctttttggtcctctaactatttaattggtat 52557128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 53259587 - 53259547
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||| |||||||||| | ||||||||||||||||||    
T  53259587 gctaaattatctttttggtcctctaactatttaattggtat 53259547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 24372426 - 24372376
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24372426 tttattttaggctaaattacatttttggtcctctaactatttaattggtat 24372376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 10991839 - 10991892
Alignment:
Q  67 taatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| ||| |||||||||||||||||||||| | ||||||||||||||||||    
T  10991839 taatttttttaaggctaaattacctttttggtcctctaactatttaattggtat 10991892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 24138065 - 24138109
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  24138065 ttaggctaaattacctttttggtcctctaactatttaattggtat 24138109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 8174339 - 8174294
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||    
T  8174339 tttaggctaaattatctttttggtcctctaactatttaattggtat 8174294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 17050925 - 17050970
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||    
T  17050925 tttaggctaaattatctttttggtcctctaactatttaattggtat 17050970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 33470385 - 33470332
Alignment:
Q  67 taatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| |||||||| |||||||||||||||| | |||||||||| |||||||    
T  33470385 taatttaatttaggcttaattacctttttggtcctctaactatttagttggtat 33470332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 17032590 - 17032634
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||    
T  17032590 ttaggctaaattatctttttggtcctctaactatttaattggtat 17032634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 13192986 - 13193029
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  13192986 taggctaaattacttttttggtcctctaactatttaattggtat 13193029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 41474084 - 41474123
Alignment:
Q  81 ctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||| ||||||||||| ||||||||||||||||||    
T  41474084 ctaaattacatttttggtcttctaactatttaattggtat 41474123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 8445244 - 8445198
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| ||||||||||||||| ||| | ||||||||||||||||||    
T  8445244 ttttagactaaattaccttttttgtcctctaactatttaattggtat 8445198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 19816155 - 19816113
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| |  |||||||||||||||||    
T  19816155 aggctaaattacctttttggtcctcaaactatttaattggtat 19816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 24138957 - 24138916
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  24138957 ggcttaattacctttttggtattctaactatttaattggtat 24138916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 29472242 - 29472283
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  29472242 ggctcaattacctttttggtcctctaactatttaattggtat 29472283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 34735793 - 34735752
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  34735793 ggctaaattacatttttggtcctctaactatttaattggtat 34735752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 36713588 - 36713629
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  36713588 ggctaaattacctttttgatcctctaactatttaattggtat 36713629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 15406212 - 15406165
Alignment:
Q  72 tattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| ||||||||||||||||| ||| | ||||||||||||||||||    
T  15406212 tatttttggctaaattaccttttt-gtcctctaactatttaattggtat 15406165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 15744458 - 15744498
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||| | |||||||||| |||||||    
T  15744458 gctaaattacctttttggtcctctaactatttagttggtat 15744498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 29472695 - 29472651
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| || ||||||||||||| | ||||||||||||||||||    
T  29472695 ttaggcttaaatacctttttggtcctctaactatttaattggtat 29472651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 8426 - 8470
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  8426 ttaggctaaattacctttttggtcctctaactatttaattggtat 8470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 2596384 - 2596427
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggt 118  Q
    |||||||||||||||||||||||||  |||||||||||||||||    
T  2596384 tttaggctaaattacctttttggtcccttaactatttaattggt 2596427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 27185859 - 27185915
Alignment:
Q  64 gattaatttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||| |||| |||||| ||||||||| | ||||||||||||||||||    
T  27185859 gattagtttatttttggcttaattacttttttggtcctctaactatttaattggtat 27185915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 9989321 - 9989364
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||    
T  9989321 taggctaaattacttttttggtcatctaactatttaattggtat 9989364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 24040079 - 24040126
Alignment:
Q  73 attttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| || ||||| |||||||||| ||||||||||||||||||||    
T  24040079 attttagacttaattatctttttggtcctttaactatttaattggtat 24040126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 19185635 - 19185593
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||  |||||||||||||| ||||    
T  19185635 aggctaaattacctttttggtcccttaactatttaattagtat 19185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 25567439 - 25567397
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||    
T  25567439 aggctaaattacttttttagtcctttaactatttaattggtat 25567397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 27186324 - 27186282
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||| ||||||||| | ||||||||||||||||||    
T  27186324 aggctaaattacatttttggtcctctaactatttaattggtat 27186282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 36440651 - 36440609
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| |||||||||| | ||||||||||||||||||    
T  36440651 aggctaaattatctttttggtcctctaactatttaattggtat 36440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 31756757 - 31756712
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggta 119  Q
    ||||||| | |||||||||||||||||  |||||||||||||||||    
T  31756757 ttttaggtttaattacctttttggtctcctaactatttaattggta 31756712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 38958724 - 38958765
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  38958724 ggcttaattacctttttggtcctctaactatttaattggtat 38958765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 38959173 - 38959132
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  38959173 ggcttaattacctttttggtcctctaactatttaattggtat 38959132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 19184602 - 19184638
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  19184602 aattacctttttggtcctctaactatttaattggtat 19184638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 25183098 - 25183062
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  25183098 aattacctttttggtcctctaactatttaattggtat 25183062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 32288083 - 32288119
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  32288083 aattacctttttggtcctctaactatttaattggtat 32288119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 35569780 - 35569816
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| |||||||||| |||||||    
T  35569780 aattacctttttggtcttctaactatttagttggtat 35569816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 37424713 - 37424677
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattg 116  Q
    |||||||||||||||||||| | ||||||||||||||    
T  37424713 gctaaattacctttttggtcctctaactatttaattg 37424677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 28986597 - 28986550
Alignment:
Q  73 attttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  28986597 attttaggctaaattacctttttggtcctctaattatttaattggtat 28986550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 26318633 - 26318591
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  26318633 aggctaaattacctttttggtcatctaactatttaattggtat 26318591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 40639512 - 40639462
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  40639512 tttattttaggctaaattatgtttttggtcctttaactatttaattagtat 40639462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 53716748 - 53716702
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||    
T  53716748 ttttaggcttaattacctttttggtcatctaactatttaattggtat 53716702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 10506398 - 10506357
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  10506398 ggctaaattacctttttggtcctctaactatttaattggtat 10506357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 54108352 - 54108311
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  54108352 ggctaaattacctttttggtcctctaactatttaattggtat 54108311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 47669260 - 47669300
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  47669260 gctaaattacctttttggtcctctaactatttaattggtat 47669300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 51311907 - 51311863
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||    
T  51311907 ttaggctaaattacatttttggtctgttaactatttaattagtat 51311863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 21969630 - 21969669
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggta 119  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  21969630 gctaaattacctttttggtcctctaactatttaattggta 21969669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 21992066 - 21992105
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggta 119  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  21992066 gctaaattacctttttggtcctctaactatttaattggta 21992105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 39664648 - 39664593
Alignment:
Q  66 ttaatttatttta-ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  39664648 ttaagttattttatggctaaattacatttttggtcctctaactatttaattggtat 39664593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 49528147 - 49528190
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||    
T  49528147 taggcttaattacctttttggtcctctaactatttaattggtat 49528190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 4773242 - 4773284
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  4773242 aggcttaattacctttttggtcctctaactatttaattggtat 4773284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 8474293 - 8474255
Alignment:
Q  82 taaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  8474293 taaattacctttttggtcctctaactatttaattggtat 8474255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 12204010 - 12203960
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||| ||||||||| ||||||||   ||||||||||||||||||    
T  12204010 tttattttaggttaaattaccgttttggtcccctaactatttaattggtat 12203960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 18464907 - 18464865
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  18464907 aggcttaattacctttttggtcctctaactatttaattggtat 18464865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 27801940 - 27801898
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  27801940 aggcttaattacctttttggtcctctaactatttaattggtat 27801898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 29818180 - 29818218
Alignment:
Q  82 taaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  29818180 taaattacctttttggtcctctaactatttaattggtat 29818218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 39664183 - 39664225
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  39664183 aggcttaattacctttttggtcctctaactatttaattggtat 39664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 121
Target Start/End: Original strand, 54752163 - 54752205
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtata 121  Q
    |||||||||| |||||||||| | |||||||||||||||||||    
T  54752163 ggctaaattatctttttggtcctctaactatttaattggtata 54752205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 12791626 - 12791585
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||| |||||||||| | ||||||||||||||||||    
T  12791626 ggctaaattatctttttggtcctctaactatttaattggtat 12791585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 15791558 - 15791513
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||  ||||||||| | ||||||||||||||||||    
T  15791558 tttaggctaaattatatttttggtcctctaactatttaattggtat 15791513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 16931597 - 16931642
Alignment:
Q  70 tttattttaggctaaattacctttttggtcttttaactatttaatt 115  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||||    
T  16931597 tttattctaggctaaattacatttttggtcctctaactatttaatt 16931642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 22151844 - 22151885
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggta 119  Q
    |||||||||||| ||||||||| | |||||||||||||||||    
T  22151844 aggctaaattacatttttggtcctataactatttaattggta 22151885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 24429017 - 24428976
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  24429017 ggcttaattacctttttggtcatctaactatttaattggtat 24428976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 41835380 - 41835339
Alignment:
Q  75 tttaggctaaattacctttttggtcttttaactatttaattg 116  Q
    |||||| |||||||||||||||||| | ||||||||||||||    
T  41835380 tttaggttaaattacctttttggtcctctaactatttaattg 41835339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 42591784 - 42591825
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||| | |||||||||||| |||||    
T  42591784 ggctaaattacctttttggtcctctaactatttaatcggtat 42591825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Complemental strand, 44317665 - 44317624
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||| |||||||||||||||| | ||||||||||||||||||    
T  44317665 ggcttaattacctttttggtcctctaactatttaattggtat 44317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 45306832 - 45306873
Alignment:
Q  79 ggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  45306832 ggctaaattacctttttgatcctctaactatttaattggtat 45306873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 50394412 - 50394371
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggt 118  Q
    |||| ||||||||||||||||||  |||||||||||||||||    
T  50394412 taggttaaattacctttttggtcccttaactatttaattggt 50394371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 10505953 - 10505989
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  10505953 aattacctttttggtcctctaactatttaattggtat 10505989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 11256100 - 11256144
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||| |||||||||||| ||| | ||||||||||||||||||    
T  11256100 ttaggcttaattacctttttagtcctctaactatttaattggtat 11256144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 11256548 - 11256512
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  11256548 aattacctttttggtcctctaactatttaattggtat 11256512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 12992400 - 12992360
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggt 118  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  12992400 aggctaaattacctttttgatcccttaactatttaattggt 12992360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 13866025 - 13866061
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  13866025 aattacctttttggtcctctaactatttaattggtat 13866061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 30681879 - 30681827
Alignment:
Q  67 taatttattttaggctaaattacctttttggtcttttaactatttaattggta 119  Q
    |||||| || |||||| ||||| |||||||||| | |||||||||||||||||    
T  30681879 taattttttctaggcttaattatctttttggtcctctaactatttaattggta 30681827  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 39241359 - 39241399
Alignment:
Q  80 gctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||| ||||||||| | ||||||||||||||||||    
T  39241359 gctaaattacatttttggtcctctaactatttaattggtat 39241399  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 44894185 - 44894149
Alignment:
Q  84 aattacctttttggtcttttaactatttaattggtat 120  Q
    |||||||||||||||| | ||||||||||||||||||    
T  44894185 aattacctttttggtcctctaactatttaattggtat 44894149  T

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Target: scaffold0134 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 14588 - 14548
Alignment:
Q  76 ttaggctaaattacctttttggtcttttaactatttaattg 116  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  14588 ttaggctaaattacctttttggtcctctaactatttaattg 14548  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 24160 - 24203
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||||||||||||||||| | |||||||||| |||||||    
T  24160 taggctaaattacctttttggtcctctaactatttagttggtat 24203  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 22605 - 22562
Alignment:
Q  77 taggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    |||||| |||||||||||||||| | ||||||||||||||||||    
T  22605 taggcttaattacctttttggtcctctaactatttaattggtat 22562  T

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Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 21511 - 21553
Alignment:
Q  78 aggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||| |||||||||||||||| | ||||||||||||||||||    
T  21511 aggcttaattacctttttggtcctctaactatttaattggtat 21553  T

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Target: scaffold0225 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 9777 - 9823
Alignment:
Q  74 ttttaggctaaattacctttttggtcttttaactatttaattggtat 120  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  9777 ttttaggcttaattgcctttttggtcccttaactatttaattggtat 9823  T

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