View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20384_low_205 (Length: 267)
Name: NF20384_low_205
Description: NF20384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20384_low_205 |
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Alignment Details
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 26592876 - 26592739
Alignment:
| Q |
16 |
cacaaacaacctaagaccctagtaagtctctaatttcatatcaaatacacaatttcacggttatgaccaagtatttgggttcgagtacttaatgagttcc |
115 |
Q |
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| T |
26592876 |
cacaaacaaccaaagaccctagtaagtctctaatttcatatcaaatacacaatttcacggttatgaccaagtatttgggttcgagtacttaatgagttcc |
26592777 |
T |
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| Q |
116 |
accaggaacaaactcgttagaacccaagttcaattctt |
153 |
Q |
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|||| ||||||| ||| |||||||||||||||||||| |
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| T |
26592776 |
accaagaacaaattcgggagaacccaagttcaattctt |
26592739 |
T |
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